{\rtf1\ansi\ansicpg1252\cocoartf2822 \cocoatextscaling0\cocoaplatform0{\fonttbl\f0\fswiss\fcharset0 Helvetica;} {\colortbl;\red255\green255\blue255;} {\*\expandedcolortbl;;} \margl1440\margr1440\vieww11520\viewh8400\viewkind0 \pard\tx720\tx1440\tx2160\tx2880\tx3600\tx4320\tx5040\tx5760\tx6480\tx7200\tx7920\tx8640\pardirnatural\partightenfactor0 \f0\fs24 \cf0 ------------------------------------------------------------------\ started QSIprep\ sub-FACT181\ Sun Aug 31 11:49:03 EDT 2025\ ------------------------------------------------------------------\ 250831-11:49:37,129 nipype.workflow IMPORTANT:\ Running QSIPrep version 1.0.2.dev0+gfc89945.d20250405\ \ License NOTICE ##################################################\ QSIPrep 1.0.2.dev0+gfc89945.d20250405\ Copyright The PennLINC Developers.\ \ This product includes software developed by\ the NiPreps Community (https://nipreps.org/).\ \ Portions of this software were developed at the Department of\ Psychology at Stanford University, Stanford, CA, US.\ \ This software is also distributed as a Docker container image.\ The bootstrapping file for the image ("Dockerfile") is licensed\ under the MIT License.\ \ This software may be distributed through an add-on package called\ "Docker Wrapper" that is under the BSD 3-clause License.\ #################################################################\ 250831-11:49:37,145 nipype.workflow IMPORTANT:\ Building QSIPrep's workflow:\ * BIDS dataset path: /data.\ * Participant list: ['FACT181'].\ * Run identifier: 20250831-114918_78d25a1c-7f39-4165-a3ee-fbaf0773dfbe.\ 250831-11:49:37,333 nipype.workflow IMPORTANT:\ Collected data:\ dwi:\ - /data/sub-FACT181/ses-pre/dwi/sub-FACT181_ses-pre_dwi.nii.gz\ flair: []\ fmap:\ - /data/sub-FACT181/ses-pre/fmap/sub-FACT181_ses-pre_dir-AP_epi.nii.gz\ roi: []\ sbref: []\ t1w:\ - /data/sub-FACT181/ses-pre/anat/sub-FACT181_ses-pre_T1w.nii.gz\ t2w: []\ \ 250831-11:49:37,347 nipype.workflow INFO:\ Running nonlinear normalization to template\ 250831-11:49:37,371 nipype.workflow INFO:\ Grouping DWI scans\ 250831-11:49:37,384 nipype.workflow INFO:\ Found 1 groups of DWI series based on their warp spaces:\ [ \{ 'concatenated_bids_name': 'sub-FACT181_ses-pre',\ 'dwi_series': ['/data/sub-FACT181/ses-pre/dwi/sub-FACT181_ses-pre_dwi.nii.gz'],\ 'dwi_series_pedir': 'j-',\ 'fieldmap_info': \{'suffix': None\}\}]\ 250831-11:49:37,385 nipype.workflow INFO:\ Found 1 groups of DWI series that can be corrected by eddy:\ [ \{ 'concatenated_bids_name': 'sub-FACT181_ses-pre',\ 'dwi_series': ['/data/sub-FACT181/ses-pre/dwi/sub-FACT181_ses-pre_dwi.nii.gz'],\ 'dwi_series_pedir': 'j-',\ 'fieldmap_info': \{'suffix': None\}\}]\ 250831-11:49:37,386 nipype.workflow INFO:\ Finished grouping DWI scans\ 250831-11:49:37,386 nipype.workflow INFO:\ [\{'dwi_series': ['/data/sub-FACT181/ses-pre/dwi/sub-FACT181_ses-pre_dwi.nii.gz'], 'fieldmap_info': \{'suffix': None\}, 'dwi_series_pedir': 'j-', 'concatenated_bids_name': 'sub-FACT181_ses-pre'\}]\ 250831-11:49:37,785 nipype.workflow INFO:\ Automatically using 3, 3, 3 window for dwidenoise\ 250831-11:49:37,795 nipype.workflow INFO:\ Using 8 threads in eddy\ 250831-11:49:40,855 nipype.workflow INFO:\ QSIPrep workflow graph with 244 nodes built successfully.\ 250831-11:49:54,260 nipype.workflow IMPORTANT:\ QSIPrep started!\ 250831-11:49:57,883 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.merge_and_denoise_wf.noise_images" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/noise_images".\ 250831-11:49:57,932 nipype.workflow INFO:\ [Node] Executing "noise_images" \ 250831-11:49:57,956 nipype.workflow INFO:\ [Node] Finished "noise_images", elapsed time 0.00172s.\ 250831-11:49:57,983 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.merge_and_denoise_wf.bias_images" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/bias_images".\ 250831-11:49:58,19 nipype.workflow INFO:\ [Node] Executing "bias_images" \ 250831-11:49:58,20 nipype.workflow INFO:\ [Node] Finished "bias_images", elapsed time 0.000183s.\ 250831-11:50:00,273 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.bidssrc" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/bidssrc".\ 250831-11:50:00,330 nipype.workflow INFO:\ [Node] Executing "bidssrc" \ 250831-11:50:00,335 nipype.interface INFO:\ No T2w images found for subject sub-, but no problem because --anat-modality T1w was selected.\ 250831-11:50:00,335 nipype.interface WARNING:\ No 'flair' images found for sub-\ 250831-11:50:00,335 nipype.interface WARNING:\ No 'sbref' images found for sub-\ 250831-11:50:00,335 nipype.interface WARNING:\ No 'roi' images found for sub-\ 250831-11:50:00,337 nipype.workflow INFO:\ [Node] Finished "bidssrc", elapsed time 0.002019s.\ 250831-11:50:00,513 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.output_grid_wf.voxel_size_chooser" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/output_grid_wf/voxel_size_chooser".\ 250831-11:50:00,560 nipype.workflow INFO:\ [Node] Executing "voxel_size_chooser" \ 250831-11:50:00,564 nipype.workflow INFO:\ [Node] Finished "voxel_size_chooser", elapsed time 0.000244s.\ 250831-11:50:00,586 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.get_template_image" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/get_template_image".\ 250831-11:50:00,669 nipype.workflow INFO:\ [Node] Executing "get_template_image" \ 250831-11:50:00,896 nipype.workflow INFO:\ [Node] Finished "get_template_image", elapsed time 0.223746s.\ 250831-11:50:00,941 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.merge_and_denoise_wf.conform_dwis01" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/conform_dwis01".\ 250831-11:50:00,986 nipype.workflow INFO:\ [Node] Executing "conform_dwis01" \ 250831-11:50:01,83 nipype.interface INFO:\ Not applying reorientation to /data/sub-FACT181/ses-pre/dwi/sub-FACT181_ses-pre_dwi.nii.gz: already in LAS\ 250831-11:50:01,85 nipype.workflow INFO:\ [Node] Finished "conform_dwis01", elapsed time 0.091088s.\ 250831-11:50:01,143 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.anat_template_wf.template_dimensions" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/anat_template_wf/template_dimensions".\ 250831-11:50:01,460 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_finalize_ses_pre_wf.merged_sidecar" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_finalize_ses_pre_wf/merged_sidecar".\ 250831-11:50:01,506 nipype.workflow INFO:\ [Node] Executing "merged_sidecar" \ 250831-11:50:01,514 nipype.workflow INFO:\ [Node] Finished "merged_sidecar", elapsed time 0.004038s.\ 250831-11:50:02,806 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.reorient_mask_to_lps" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/reorient_mask_to_lps".\ 250831-11:50:02,808 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.merge_and_denoise_wf.conformed_raw_images" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/conformed_raw_images".\ 250831-11:50:02,808 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.merge_and_denoise_wf.conformation_reports" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/conformation_reports".\ 250831-11:50:02,810 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.merge_and_denoise_wf.conformed_bvals" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/conformed_bvals".\ 250831-11:50:02,836 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_ses_pre_dwi_wf.denoiser" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_denoise_ses_pre_dwi_wf/denoiser".\ 250831-11:50:02,859 nipype.workflow INFO:\ [Node] Executing "conformed_raw_images" \ 250831-11:50:02,861 nipype.workflow INFO:\ [Node] Finished "conformed_raw_images", elapsed time 0.000294s.\ 250831-11:50:02,870 nipype.workflow INFO:\ [Node] Executing "reorient_mask_to_lps" \ 250831-11:50:02,871 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.merge_and_denoise_wf.conformed_bvecs" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/conformed_bvecs".\ 250831-11:50:02,889 nipype.workflow INFO:\ [Node] Executing "conformation_reports" \ 250831-11:50:02,891 nipype.workflow INFO:\ [Node] Finished "conformation_reports", elapsed time 0.000333s.\ 250831-11:50:02,895 nipype.workflow INFO:\ [Node] Executing "denoiser" \ 250831-11:50:02,938 nipype.workflow INFO:\ [Node] Executing "conformed_bvecs" \ 250831-11:50:02,939 nipype.workflow INFO:\ [Node] Finished "conformed_bvecs", elapsed time 0.000235s.\ 250831-11:50:02,946 nipype.workflow INFO:\ [Node] Executing "conformed_bvals" \ 250831-11:50:02,947 nipype.workflow INFO:\ [Node] Finished "conformed_bvals", elapsed time 0.000294s.\ 250831-11:50:02,951 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.mask_template" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/mask_template".\ 250831-11:50:03,664 nipype.workflow INFO:\ [Node] Finished "reorient_mask_to_lps", elapsed time 0.792495s.\ 250831-11:50:03,929 nipype.workflow INFO:\ [Node] Executing "template_dimensions" \ 250831-11:50:04,154 nipype.workflow INFO:\ [Node] Finished "template_dimensions", elapsed time 0.223875s.\ 250831-11:50:05,355 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.anat_derivatives_wf.t1_name" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/anat_derivatives_wf/t1_name".\ 250831-11:50:05,566 nipype.workflow INFO:\ [Node] Setting-up "_anat_conform0" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/anat_template_wf/anat_conform/mapflow/_anat_conform0".\ 250831-11:50:05,636 nipype.workflow INFO:\ [Node] Executing "_anat_conform0" \ 250831-11:50:05,816 nipype.workflow INFO:\ [Node] Executing "t1_name" \ 250831-11:50:05,817 nipype.workflow INFO:\ [Node] Finished "t1_name", elapsed time 0.000621s.\ 250831-11:50:05,888 nipype.interface WARNING:\ Removing obliquity from image affine\ 250831-11:50:06,308 nipype.workflow INFO:\ [Node] Finished "_anat_conform0", elapsed time 0.671053s.\ 250831-11:50:07,390 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.merge_and_denoise_wf.raw_merge" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/raw_merge".\ 250831-11:50:07,453 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.anat_template_wf.n4_correct" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/anat_template_wf/n4_correct".\ 250831-11:50:07,454 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.dl_prep_wf.skulled_1mm_resample" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/dl_prep_wf/skulled_1mm_resample".\ 250831-11:50:07,510 nipype.workflow INFO:\ [Node] Executing "n4_correct" \ 250831-11:50:07,733 nipype.workflow INFO:\ [Node] Executing "raw_merge" \ 250831-11:50:08,99 nipype.workflow INFO:\ [Node] Executing "skulled_1mm_resample" \ 250831-11:50:09,350 nipype.workflow INFO:\ [Node] Executing "mask_template" \ 250831-11:50:12,649 nipype.workflow INFO:\ [Node] Finished "skulled_1mm_resample", elapsed time 4.548062s.\ 250831-11:50:13,208 nipype.workflow INFO:\ [Node] Finished "raw_merge", elapsed time 5.451435s.\ 250831-11:50:13,572 nipype.workflow INFO:\ [Node] Finished "mask_template", elapsed time 4.076281s.\ 250831-11:50:13,771 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.dl_prep_wf.skulled_autobox" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/dl_prep_wf/skulled_autobox".\ 250831-11:50:14,313 nipype.workflow INFO:\ [Node] Executing "skulled_autobox" \ 250831-11:50:15,596 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.reorient_brain_to_lps" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/reorient_brain_to_lps".\ 250831-11:50:15,646 nipype.workflow INFO:\ [Node] Executing "reorient_brain_to_lps" \ 250831-11:50:16,439 nipype.workflow INFO:\ [Node] Finished "reorient_brain_to_lps", elapsed time 0.792732s.\ 250831-11:50:17,521 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.output_grid_wf.autobox_template" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/output_grid_wf/autobox_template".\ 250831-11:50:17,581 nipype.workflow INFO:\ [Node] Executing "autobox_template" \ 250831-11:50:17,601 nipype.workflow INFO:\ [Node] Finished "skulled_autobox", elapsed time 3.286237s.\ 250831-11:50:18,491 nipype.workflow INFO:\ [Node] Finished "autobox_template", elapsed time 0.908861s.\ 250831-11:50:19,315 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.test_pre_hmc_connect" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/test_pre_hmc_connect".\ 250831-11:50:19,443 nipype.workflow INFO:\ [Node] Executing "test_pre_hmc_connect" \ 250831-11:50:19,458 nipype.workflow INFO:\ [Node] Finished "test_pre_hmc_connect", elapsed time 7.9e-05s.\ 250831-11:50:19,458 nipype.workflow WARNING:\ Storing result file without outputs\ 250831-11:50:19,536 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.output_grid_wf.deoblique_autobox" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/output_grid_wf/deoblique_autobox".\ 250831-11:50:19,537 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.dl_prep_wf.prepare_synthstrip_reference" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/dl_prep_wf/prepare_synthstrip_reference".\ 250831-11:50:19,629 nipype.workflow INFO:\ [Node] Executing "prepare_synthstrip_reference" \ 250831-11:50:19,632 nipype.workflow INFO:\ [Node] Executing "deoblique_autobox" \ 250831-11:50:20,67 nipype.interface INFO:\ stderr 2025-08-31T11:50:20.067349:++ 3dZeropad: AFNI version=AFNI_23.0.07 (Mar 1 2023) [64-bit]\ 250831-11:50:20,534 nipype.interface INFO:\ stderr 2025-08-31T11:50:20.534637:++ output dataset: /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/dl_prep_wf/prepare_synthstrip_reference/sub-FACT181_ses-pre_T1w_lps_resample_autobox_SynthStripGrid.nii\ 250831-11:50:20,610 nipype.workflow INFO:\ [Node] Finished "deoblique_autobox", elapsed time 0.976497s.\ 250831-11:50:20,720 nipype.workflow INFO:\ [Node] Finished "prepare_synthstrip_reference", elapsed time 1.089801s.\ 250831-11:50:21,535 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.output_grid_wf.resample_to_voxel_size" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size".\ 250831-11:50:21,536 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.dl_prep_wf.resample_skulled_to_reference" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/dl_prep_wf/resample_skulled_to_reference".\ 250831-11:50:21,597 nipype.workflow INFO:\ [Node] Executing "resample_to_voxel_size" \ 250831-11:50:21,732 nipype.workflow INFO:\ [Node] Executing "resample_skulled_to_reference" \ 250831-11:50:22,20 nipype.workflow INFO:\ [Node] Finished "resample_to_voxel_size", elapsed time 0.422375s.\ 250831-11:50:23,352 nipype.interface INFO:\ Generating denoising visual report\ 250831-11:50:27,329 nipype.workflow INFO:\ [Node] Finished "resample_skulled_to_reference", elapsed time 5.106189s.\ 250831-11:50:27,559 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.synthstrip_anat_wf.synthstrip" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/synthstrip_anat_wf/synthstrip".\ 250831-11:50:27,560 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.synthseg_wf.synthseg" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/synthseg_wf/synthseg".\ 250831-11:50:27,637 nipype.workflow INFO:\ [Node] Executing "synthseg" \ 250831-11:50:27,695 nipype.workflow INFO:\ [Node] Executing "synthstrip" \ 250831-11:50:31,409 nipype.workflow INFO:\ [Node] Finished "n4_correct", elapsed time 22.51631s.\ 250831-11:50:51,758 nipype.workflow INFO:\ [Node] Finished "synthstrip", elapsed time 24.061638s.\ 250831-11:50:53,611 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.synthstrip_anat_wf.mask_to_original_grid" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/synthstrip_anat_wf/mask_to_original_grid".\ 250831-11:50:53,648 nipype.workflow INFO:\ [Node] Executing "mask_to_original_grid" \ 250831-11:50:54,605 nipype.workflow INFO:\ [Node] Finished "mask_to_original_grid", elapsed time 0.529278s.\ 250831-11:50:55,601 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.synthstrip_anat_wf.mask_brain" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/synthstrip_anat_wf/mask_brain".\ 250831-11:50:55,601 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.anat_normalization_wf.acpc_reg" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/anat_normalization_wf/acpc_reg".\ 250831-11:50:55,630 nipype.workflow INFO:\ [Node] Executing "mask_brain" \ 250831-11:50:55,644 nipype.workflow INFO:\ [Node] Executing "acpc_reg" \ 250831-11:50:56,393 nipype.workflow INFO:\ [Node] Finished "mask_brain", elapsed time 0.446598s.\ 250831-11:51:00,983 nipype.workflow INFO:\ [Node] Finished "denoiser", elapsed time 57.509664s.\ 250831-11:51:02,383 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_ses_pre_dwi_wf.merge_confounds" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_denoise_ses_pre_dwi_wf/merge_confounds".\ 250831-11:51:02,383 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.merge_and_denoise_wf.conformed_images" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/conformed_images".\ 250831-11:51:02,586 nipype.workflow INFO:\ [Node] Executing "merge_confounds" \ 250831-11:51:02,587 nipype.workflow INFO:\ [Node] Finished "merge_confounds", elapsed time 0.000177s.\ 250831-11:51:02,588 nipype.workflow INFO:\ [Node] Executing "conformed_images" \ 250831-11:51:02,589 nipype.workflow INFO:\ [Node] Finished "conformed_images", elapsed time 0.000204s.\ 250831-11:51:04,957 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_ses_pre_dwi_wf.hstack_confounds" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_denoise_ses_pre_dwi_wf/hstack_confounds".\ 250831-11:51:05,66 nipype.workflow INFO:\ [Node] Executing "hstack_confounds" \ 250831-11:51:05,146 nipype.workflow INFO:\ [Node] Finished "hstack_confounds", elapsed time 0.078539s.\ 250831-11:51:05,743 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.merge_and_denoise_wf.denoising_confounds" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/denoising_confounds".\ 250831-11:51:07,121 nipype.workflow INFO:\ [Node] Executing "denoising_confounds" \ 250831-11:51:07,122 nipype.workflow INFO:\ [Node] Finished "denoising_confounds", elapsed time 0.000182s.\ 250831-11:51:08,32 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.merge_and_denoise_wf.merge_dwis" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/merge_dwis".\ 250831-11:51:08,64 nipype.workflow INFO:\ [Node] Executing "merge_dwis" \ 250831-11:51:10,109 nipype.workflow INFO:\ [Node] Finished "merge_dwis", elapsed time 2.043448s.\ 250831-11:51:11,723 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.dwi_qc_wf.raw_src" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/dwi_qc_wf/raw_src".\ 250831-11:51:11,732 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.raw_src" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_qc_wf/raw_src".\ 250831-11:51:12,216 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.hmc_sdc_wf.gather_inputs" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/gather_inputs".\ 250831-11:51:12,732 nipype.workflow INFO:\ [Node] Executing "gather_inputs" \ 250831-11:51:12,783 nipype.workflow INFO:\ [Node] Executing "raw_src" \ 250831-11:51:13,477 nipype.workflow INFO:\ [Node] Executing "raw_src" \ 250831-11:51:36,326 nipype.workflow INFO:\ [Node] Finished "raw_src", elapsed time 23.541322s.\ 250831-11:51:36,359 nipype.workflow INFO:\ [Node] Finished "raw_src", elapsed time 22.880825s.\ 250831-11:51:37,768 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.raw_src_qc" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_qc_wf/raw_src_qc".\ 250831-11:51:37,776 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.raw_gqi" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_qc_wf/raw_gqi".\ 250831-11:51:37,782 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.dwi_qc_wf.raw_gqi" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/dwi_qc_wf/raw_gqi".\ 250831-11:51:37,784 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.dwi_qc_wf.raw_src_qc" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/dwi_qc_wf/raw_src_qc".\ 250831-11:51:37,810 nipype.workflow INFO:\ [Node] Executing "raw_src_qc" \ 250831-11:51:37,859 nipype.workflow INFO:\ [Node] Executing "raw_gqi" \ 250831-11:51:37,889 nipype.workflow INFO:\ [Node] Executing "raw_src_qc" \ 250831-11:51:38,5 nipype.workflow INFO:\ [Node] Executing "raw_gqi" \ 250831-11:51:40,749 nipype.interface INFO:\ DSI Studio version: Hou "\uc0\u20399 " Aug 2 2024\ \uc0\u9484 \u9472 \u9472 \u55357 \u56543 command line\ \uc0\u9500 \u9472 \u9472 source=/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_qc_wf/raw_src_qc/sub-FACT181_ses-pre_dwi_merged.src.gz\ \uc0\u9500 \u9472 \u9472 action=qc\ \uc0\u9500 \u9472 \u9472 loop=/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_qc_wf/raw_src_qc/sub-FACT181_ses-pre_dwi_merged.src.gz\ \uc0\u9500 \u9472 \u9472 \u9516 \u9472 \u9472 \u55357 \u56543 run qc\ \uc0\u9474 \u9500 \u9472 \u9472 is_fib=0\ \uc0\u9474 \u9500 \u9472 \u9472 output=qc.txt\ \uc0\u9474 \u9500 \u9472 \u9472 \u55357 \u56510 saving qc.txt\ \uc0\u9474 \u9500 \u9472 \u9472 \u9516 \u9472 \u9472 \u55357 \u56543 checking SRC files\ \uc0\u9474 \u9474 \u9500 \u9472 \u9472 checking /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_qc_wf/raw_src_qc/sub-FACT181_ses-pre_dwi_merged.src.gz\ \uc0\u9474 \u9474 \u9500 \u9472 \u9472 \u9516 \u9472 \u9472 \u55357 \u56514 open SRC file sub-FACT181_ses-pre_dwi_merged.src.gz\ \uc0\u9474 \u9474 \u9474 \u9500 \u9472 \u9472 generating mask\ \uc0\u9474 \u9474 \u9474 \u9492 \u9472 \u9472 \u9201 2.073s\ \uc0\u9474 \u9474 \u9492 \u9472 \u9472 \u9201 2.836s\ \uc0\u9474 \u9492 \u9472 \u9472 \u9201 2.855s\ \uc0\u9492 \u9472 \u9472 \u9201 2.878s\ \ 250831-11:51:40,753 nipype.workflow INFO:\ [Node] Finished "raw_src_qc", elapsed time 2.9356910000000003s.\ 250831-11:51:41,388 nipype.interface INFO:\ DSI Studio version: Hou "\uc0\u20399 " Aug 2 2024\ \uc0\u9484 \u9472 \u9472 \u55357 \u56543 command line\ \uc0\u9500 \u9472 \u9472 source=/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/dwi_qc_wf/raw_src_qc/sub-FACT181_ses-pre_dwi_merged.src.gz\ \uc0\u9500 \u9472 \u9472 action=qc\ \uc0\u9500 \u9472 \u9472 loop=/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/dwi_qc_wf/raw_src_qc/sub-FACT181_ses-pre_dwi_merged.src.gz\ \uc0\u9500 \u9472 \u9472 \u9516 \u9472 \u9472 \u55357 \u56543 run qc\ \uc0\u9474 \u9500 \u9472 \u9472 is_fib=0\ \uc0\u9474 \u9500 \u9472 \u9472 output=qc.txt\ \uc0\u9474 \u9500 \u9472 \u9472 \u55357 \u56510 saving qc.txt\ \uc0\u9474 \u9500 \u9472 \u9472 \u9516 \u9472 \u9472 \u55357 \u56543 checking SRC files\ \uc0\u9474 \u9474 \u9500 \u9472 \u9472 checking /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/dwi_qc_wf/raw_src_qc/sub-FACT181_ses-pre_dwi_merged.src.gz\ \uc0\u9474 \u9474 \u9500 \u9472 \u9472 \u9516 \u9472 \u9472 \u55357 \u56514 open SRC file sub-FACT181_ses-pre_dwi_merged.src.gz\ \uc0\u9474 \u9474 \u9474 \u9500 \u9472 \u9472 generating mask\ \uc0\u9474 \u9474 \u9474 \u9492 \u9472 \u9472 \u9201 2.669s\ \uc0\u9474 \u9474 \u9492 \u9472 \u9472 \u9201 3.264s\ \uc0\u9474 \u9492 \u9472 \u9472 \u9201 3.349s\ \uc0\u9492 \u9472 \u9472 \u9201 3.411s\ \ 250831-11:51:41,433 nipype.workflow INFO:\ [Node] Finished "raw_src_qc", elapsed time 3.542636s.\ image_source \ \ data shape (128, 128, 74, 40)\ affine:\ [[-1.94079983e+00 -1.20630607e-01 4.67701018e-01 1.20804581e+02]\ [-2.08675683e-01 1.95596838e+00 -3.61444741e-01 -7.65352173e+01]\ [ 4.35603559e-01 3.99544865e-01 1.91065788e+00 -1.24995331e+02]\ [ 0.00000000e+00 0.00000000e+00 0.00000000e+00 1.00000000e+00]]\ metadata:\ object, endian='<'\ sizeof_hdr : 348\ data_type : b''\ db_name : b'TE=84;Time=114755'\ extents : 16384\ session_error : 0\ regular : b'r'\ dim_info : 0\ dim : [ 4 128 128 74 40 1 1 1]\ intent_p1 : 0.0\ intent_p2 : 0.0\ intent_p3 : 0.0\ intent_code : none\ datatype : float32\ bitpix : 32\ slice_start : 0\ pixdim : [-1. 2. 2. 2. 9.3 0. 0. 0. ]\ vox_offset : 0.0\ scl_slope : nan\ scl_inter : nan\ slice_end : 0\ slice_code : unknown\ xyzt_units : 10\ cal_max : 0.0\ cal_min : 0.0\ slice_duration : 0.0\ toffset : 0.0\ glmax : 0\ glmin : 0\ descrip : b'MRtrix version: 3.0.4'\ aux_file : b''\ qform_code : scanner\ sform_code : scanner\ quatern_b : 0.04166785\ quatern_c : -0.98789084\ quatern_d : -0.09628969\ qoffset_x : 120.80458\ qoffset_y : -76.53522\ qoffset_z : -124.99533\ srow_x : [-1.9407998e+00 -1.2063061e-01 4.6770102e-01 1.2080458e+02]\ srow_y : [ -0.20867568 1.9559684 -0.36144474 -76.53522 ]\ srow_z : [ 0.43560356 0.39954486 1.9106579 -124.99533 ]\ intent_name : b''\ magic : b'n+1'\ \ new_b0_path /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/gather_inputs/sub-FACT181_ses-pre_dwi_b0-00.nii.gz\ image_source \ \ data shape (128, 128, 74, 40)\ affine:\ [[-1.94079983e+00 -1.20630607e-01 4.67701018e-01 1.20804581e+02]\ [-2.08675683e-01 1.95596838e+00 -3.61444741e-01 -7.65352173e+01]\ [ 4.35603559e-01 3.99544865e-01 1.91065788e+00 -1.24995331e+02]\ [ 0.00000000e+00 0.00000000e+00 0.00000000e+00 1.00000000e+00]]\ metadata:\ object, endian='<'\ sizeof_hdr : 348\ data_type : b''\ db_name : b'TE=84;Time=114755'\ extents : 16384\ session_error : 0\ regular : b'r'\ dim_info : 0\ dim : [ 4 128 128 74 40 1 1 1]\ intent_p1 : 0.0\ intent_p2 : 0.0\ intent_p3 : 0.0\ intent_code : none\ datatype : float32\ bitpix : 32\ slice_start : 0\ pixdim : [-1. 2. 2. 2. 9.3 0. 0. 0. ]\ vox_offset : 0.0\ scl_slope : nan\ scl_inter : nan\ slice_end : 0\ slice_code : unknown\ xyzt_units : 10\ cal_max : 0.0\ cal_min : 0.0\ slice_duration : 0.0\ toffset : 0.0\ glmax : 0\ glmin : 0\ descrip : b'MRtrix version: 3.0.4'\ aux_file : b''\ qform_code : scanner\ sform_code : scanner\ quatern_b : 0.04166785\ quatern_c : -0.98789084\ quatern_d : -0.09628969\ qoffset_x : 120.80458\ qoffset_y : -76.53522\ qoffset_z : -124.99533\ srow_x : [-1.9407998e+00 -1.2063061e-01 4.6770102e-01 1.2080458e+02]\ srow_y : [ -0.20867568 1.9559684 -0.36144474 -76.53522 ]\ srow_z : [ 0.43560356 0.39954486 1.9106579 -124.99533 ]\ intent_name : b''\ magic : b'n+1'\ \ new_b0_path /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/gather_inputs/sub-FACT181_ses-pre_dwi_b0-01.nii.gz\ image_source \ \ data shape (128, 128, 74, 40)\ affine:\ [[-1.94079983e+00 -1.20630607e-01 4.67701018e-01 1.20804581e+02]\ [-2.08675683e-01 1.95596838e+00 -3.61444741e-01 -7.65352173e+01]\ [ 4.35603559e-01 3.99544865e-01 1.91065788e+00 -1.24995331e+02]\ [ 0.00000000e+00 0.00000000e+00 0.00000000e+00 1.00000000e+00]]\ metadata:\ object, endian='<'\ sizeof_hdr : 348\ data_type : b''\ db_name : b'TE=84;Time=114755'\ extents : 16384\ session_error : 0\ regular : b'r'\ dim_info : 0\ dim : [ 4 128 128 74 40 1 1 1]\ intent_p1 : 0.0\ intent_p2 : 0.0\ intent_p3 : 0.0\ intent_code : none\ datatype : float32\ bitpix : 32\ slice_start : 0\ pixdim : [-1. 2. 2. 2. 9.3 0. 0. 0. ]\ vox_offset : 0.0\ scl_slope : nan\ scl_inter : nan\ slice_end : 0\ slice_code : unknown\ xyzt_units : 10\ cal_max : 0.0\ cal_min : 0.0\ slice_duration : 0.0\ toffset : 0.0\ glmax : 0\ glmin : 0\ descrip : b'MRtrix version: 3.0.4'\ aux_file : b''\ qform_code : scanner\ sform_code : scanner\ quatern_b : 0.04166785\ quatern_c : -0.98789084\ quatern_d : -0.09628969\ qoffset_x : 120.80458\ qoffset_y : -76.53522\ qoffset_z : -124.99533\ srow_x : [-1.9407998e+00 -1.2063061e-01 4.6770102e-01 1.2080458e+02]\ srow_y : [ -0.20867568 1.9559684 -0.36144474 -76.53522 ]\ srow_z : [ 0.43560356 0.39954486 1.9106579 -124.99533 ]\ intent_name : b''\ magic : b'n+1'\ \ new_b0_path /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/gather_inputs/sub-FACT181_ses-pre_dwi_b0-02.nii.gz\ image_source \ \ data shape (128, 128, 74, 40)\ affine:\ [[-1.94079983e+00 -1.20630607e-01 4.67701018e-01 1.20804581e+02]\ [-2.08675683e-01 1.95596838e+00 -3.61444741e-01 -7.65352173e+01]\ [ 4.35603559e-01 3.99544865e-01 1.91065788e+00 -1.24995331e+02]\ [ 0.00000000e+00 0.00000000e+00 0.00000000e+00 1.00000000e+00]]\ metadata:\ object, endian='<'\ sizeof_hdr : 348\ data_type : b''\ db_name : b'TE=84;Time=114755'\ extents : 16384\ session_error : 0\ regular : b'r'\ dim_info : 0\ dim : [ 4 128 128 74 40 1 1 1]\ intent_p1 : 0.0\ intent_p2 : 0.0\ intent_p3 : 0.0\ intent_code : none\ datatype : float32\ bitpix : 32\ slice_start : 0\ pixdim : [-1. 2. 2. 2. 9.3 0. 0. 0. ]\ vox_offset : 0.0\ scl_slope : nan\ scl_inter : nan\ slice_end : 0\ slice_code : unknown\ xyzt_units : 10\ cal_max : 0.0\ cal_min : 0.0\ slice_duration : 0.0\ toffset : 0.0\ glmax : 0\ glmin : 0\ descrip : b'MRtrix version: 3.0.4'\ aux_file : b''\ qform_code : scanner\ sform_code : scanner\ quatern_b : 0.04166785\ quatern_c : -0.98789084\ quatern_d : -0.09628969\ qoffset_x : 120.80458\ qoffset_y : -76.53522\ qoffset_z : -124.99533\ srow_x : [-1.9407998e+00 -1.2063061e-01 4.6770102e-01 1.2080458e+02]\ srow_y : [ -0.20867568 1.9559684 -0.36144474 -76.53522 ]\ srow_z : [ 0.43560356 0.39954486 1.9106579 -124.99533 ]\ intent_name : b''\ magic : b'n+1'\ \ new_b0_path /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/gather_inputs/sub-FACT181_ses-pre_dwi_b0-03.nii.gz\ image_source \ \ data shape (128, 128, 74, 40)\ affine:\ [[-1.94079983e+00 -1.20630607e-01 4.67701018e-01 1.20804581e+02]\ [-2.08675683e-01 1.95596838e+00 -3.61444741e-01 -7.65352173e+01]\ [ 4.35603559e-01 3.99544865e-01 1.91065788e+00 -1.24995331e+02]\ [ 0.00000000e+00 0.00000000e+00 0.00000000e+00 1.00000000e+00]]\ metadata:\ object, endian='<'\ sizeof_hdr : 348\ data_type : b''\ db_name : b'TE=84;Time=114755'\ extents : 16384\ session_error : 0\ regular : b'r'\ dim_info : 0\ dim : [ 4 128 128 74 40 1 1 1]\ intent_p1 : 0.0\ intent_p2 : 0.0\ intent_p3 : 0.0\ intent_code : none\ datatype : float32\ bitpix : 32\ slice_start : 0\ pixdim : [-1. 2. 2. 2. 9.3 0. 0. 0. ]\ vox_offset : 0.0\ scl_slope : nan\ scl_inter : nan\ slice_end : 0\ slice_code : unknown\ xyzt_units : 10\ cal_max : 0.0\ cal_min : 0.0\ slice_duration : 0.0\ toffset : 0.0\ glmax : 0\ glmin : 0\ descrip : b'MRtrix version: 3.0.4'\ aux_file : b''\ qform_code : scanner\ sform_code : scanner\ quatern_b : 0.04166785\ quatern_c : -0.98789084\ quatern_d : -0.09628969\ qoffset_x : 120.80458\ qoffset_y : -76.53522\ qoffset_z : -124.99533\ srow_x : [-1.9407998e+00 -1.2063061e-01 4.6770102e-01 1.2080458e+02]\ srow_y : [ -0.20867568 1.9559684 -0.36144474 -76.53522 ]\ srow_z : [ 0.43560356 0.39954486 1.9106579 -124.99533 ]\ intent_name : b''\ magic : b'n+1'\ \ new_b0_path /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/gather_inputs/sub-FACT181_ses-pre_dwi_b0-04.nii.gz\ image_source \ \ data shape (128, 128, 74, 40)\ affine:\ [[-1.94079983e+00 -1.20630607e-01 4.67701018e-01 1.20804581e+02]\ [-2.08675683e-01 1.95596838e+00 -3.61444741e-01 -7.65352173e+01]\ [ 4.35603559e-01 3.99544865e-01 1.91065788e+00 -1.24995331e+02]\ [ 0.00000000e+00 0.00000000e+00 0.00000000e+00 1.00000000e+00]]\ metadata:\ object, endian='<'\ sizeof_hdr : 348\ data_type : b''\ db_name : b'TE=84;Time=114755'\ extents : 16384\ session_error : 0\ regular : b'r'\ dim_info : 0\ dim : [ 4 128 128 74 40 1 1 1]\ intent_p1 : 0.0\ intent_p2 : 0.0\ intent_p3 : 0.0\ intent_code : none\ datatype : float32\ bitpix : 32\ slice_start : 0\ pixdim : [-1. 2. 2. 2. 9.3 0. 0. 0. ]\ vox_offset : 0.0\ scl_slope : nan\ scl_inter : nan\ slice_end : 0\ slice_code : unknown\ xyzt_units : 10\ cal_max : 0.0\ cal_min : 0.0\ slice_duration : 0.0\ toffset : 0.0\ glmax : 0\ glmin : 0\ descrip : b'MRtrix version: 3.0.4'\ aux_file : b''\ qform_code : scanner\ sform_code : scanner\ quatern_b : 0.04166785\ quatern_c : -0.98789084\ quatern_d : -0.09628969\ qoffset_x : 120.80458\ qoffset_y : -76.53522\ qoffset_z : -124.99533\ srow_x : [-1.9407998e+00 -1.2063061e-01 4.6770102e-01 1.2080458e+02]\ srow_y : [ -0.20867568 1.9559684 -0.36144474 -76.53522 ]\ srow_z : [ 0.43560356 0.39954486 1.9106579 -124.99533 ]\ intent_name : b''\ magic : b'n+1'\ \ new_b0_path /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/gather_inputs/sub-FACT181_ses-pre_dwi_b0-05.nii.gz\ image_source \ \ data shape (128, 128, 74, 40)\ affine:\ [[-1.94079983e+00 -1.20630607e-01 4.67701018e-01 1.20804581e+02]\ [-2.08675683e-01 1.95596838e+00 -3.61444741e-01 -7.65352173e+01]\ [ 4.35603559e-01 3.99544865e-01 1.91065788e+00 -1.24995331e+02]\ [ 0.00000000e+00 0.00000000e+00 0.00000000e+00 1.00000000e+00]]\ metadata:\ object, endian='<'\ sizeof_hdr : 348\ data_type : b''\ db_name : b'TE=84;Time=114755'\ extents : 16384\ session_error : 0\ regular : b'r'\ dim_info : 0\ dim : [ 4 128 128 74 40 1 1 1]\ intent_p1 : 0.0\ intent_p2 : 0.0\ intent_p3 : 0.0\ intent_code : none\ datatype : float32\ bitpix : 32\ slice_start : 0\ pixdim : [-1. 2. 2. 2. 9.3 0. 0. 0. ]\ vox_offset : 0.0\ scl_slope : nan\ scl_inter : nan\ slice_end : 0\ slice_code : unknown\ xyzt_units : 10\ cal_max : 0.0\ cal_min : 0.0\ slice_duration : 0.0\ toffset : 0.0\ glmax : 0\ glmin : 0\ descrip : b'MRtrix version: 3.0.4'\ aux_file : b''\ qform_code : scanner\ sform_code : scanner\ quatern_b : 0.04166785\ quatern_c : -0.98789084\ quatern_d : -0.09628969\ qoffset_x : 120.80458\ qoffset_y : -76.53522\ qoffset_z : -124.99533\ srow_x : [-1.9407998e+00 -1.2063061e-01 4.6770102e-01 1.2080458e+02]\ srow_y : [ -0.20867568 1.9559684 -0.36144474 -76.53522 ]\ srow_z : [ 0.43560356 0.39954486 1.9106579 -124.99533 ]\ intent_name : b''\ magic : b'n+1'\ \ new_b0_path /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/gather_inputs/sub-FACT181_ses-pre_dwi_b0-06.nii.gz\ image_source \ \ data shape (128, 128, 74, 40)\ affine:\ [[-1.94079983e+00 -1.20630607e-01 4.67701018e-01 1.20804581e+02]\ [-2.08675683e-01 1.95596838e+00 -3.61444741e-01 -7.65352173e+01]\ [ 4.35603559e-01 3.99544865e-01 1.91065788e+00 -1.24995331e+02]\ [ 0.00000000e+00 0.00000000e+00 0.00000000e+00 1.00000000e+00]]\ metadata:\ object, endian='<'\ sizeof_hdr : 348\ data_type : b''\ db_name : b'TE=84;Time=114755'\ extents : 16384\ session_error : 0\ regular : b'r'\ dim_info : 0\ dim : [ 4 128 128 74 40 1 1 1]\ intent_p1 : 0.0\ intent_p2 : 0.0\ intent_p3 : 0.0\ intent_code : none\ datatype : float32\ bitpix : 32\ slice_start : 0\ pixdim : [-1. 2. 2. 2. 9.3 0. 0. 0. ]\ vox_offset : 0.0\ scl_slope : nan\ scl_inter : nan\ slice_end : 0\ slice_code : unknown\ xyzt_units : 10\ cal_max : 0.0\ cal_min : 0.0\ slice_duration : 0.0\ toffset : 0.0\ glmax : 0\ glmin : 0\ descrip : b'MRtrix version: 3.0.4'\ aux_file : b''\ qform_code : scanner\ sform_code : scanner\ quatern_b : 0.04166785\ quatern_c : -0.98789084\ quatern_d : -0.09628969\ qoffset_x : 120.80458\ qoffset_y : -76.53522\ qoffset_z : -124.99533\ srow_x : [-1.9407998e+00 -1.2063061e-01 4.6770102e-01 1.2080458e+02]\ srow_y : [ -0.20867568 1.9559684 -0.36144474 -76.53522 ]\ srow_z : [ 0.43560356 0.39954486 1.9106579 -124.99533 ]\ intent_name : b''\ magic : b'n+1'\ \ new_b0_path /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/gather_inputs/sub-FACT181_ses-pre_dwi_b0-07.nii.gz\ image_source \ \ data shape (128, 128, 74, 40)\ affine:\ [[-1.94079983e+00 -1.20630607e-01 4.67701018e-01 1.20804581e+02]\ [-2.08675683e-01 1.95596838e+00 -3.61444741e-01 -7.65352173e+01]\ [ 4.35603559e-01 3.99544865e-01 1.91065788e+00 -1.24995331e+02]\ [ 0.00000000e+00 0.00000000e+00 0.00000000e+00 1.00000000e+00]]\ metadata:\ object, endian='<'\ sizeof_hdr : 348\ data_type : b''\ db_name : b'TE=84;Time=114755'\ extents : 16384\ session_error : 0\ regular : b'r'\ dim_info : 0\ dim : [ 4 128 128 74 40 1 1 1]\ intent_p1 : 0.0\ intent_p2 : 0.0\ intent_p3 : 0.0\ intent_code : none\ datatype : float32\ bitpix : 32\ slice_start : 0\ pixdim : [-1. 2. 2. 2. 9.3 0. 0. 0. ]\ vox_offset : 0.0\ scl_slope : nan\ scl_inter : nan\ slice_end : 0\ slice_code : unknown\ xyzt_units : 10\ cal_max : 0.0\ cal_min : 0.0\ slice_duration : 0.0\ toffset : 0.0\ glmax : 0\ glmin : 0\ descrip : b'MRtrix version: 3.0.4'\ aux_file : b''\ qform_code : scanner\ sform_code : scanner\ quatern_b : 0.04166785\ quatern_c : -0.98789084\ quatern_d : -0.09628969\ qoffset_x : 120.80458\ qoffset_y : -76.53522\ qoffset_z : -124.99533\ srow_x : [-1.9407998e+00 -1.2063061e-01 4.6770102e-01 1.2080458e+02]\ srow_y : [ -0.20867568 1.9559684 -0.36144474 -76.53522 ]\ srow_z : [ 0.43560356 0.39954486 1.9106579 -124.99533 ]\ intent_name : b''\ magic : b'n+1'\ \ new_b0_path /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/gather_inputs/sub-FACT181_ses-pre_dwi_b0-08.nii.gz\ image_source \ \ data shape (128, 128, 74, 40)\ affine:\ [[-1.94079983e+00 -1.20630607e-01 4.67701018e-01 1.20804581e+02]\ [-2.08675683e-01 1.95596838e+00 -3.61444741e-01 -7.65352173e+01]\ [ 4.35603559e-01 3.99544865e-01 1.91065788e+00 -1.24995331e+02]\ [ 0.00000000e+00 0.00000000e+00 0.00000000e+00 1.00000000e+00]]\ metadata:\ object, endian='<'\ sizeof_hdr : 348\ data_type : b''\ db_name : b'TE=84;Time=114755'\ extents : 16384\ session_error : 0\ regular : b'r'\ dim_info : 0\ dim : [ 4 128 128 74 40 1 1 1]\ intent_p1 : 0.0\ intent_p2 : 0.0\ intent_p3 : 0.0\ intent_code : none\ datatype : float32\ bitpix : 32\ slice_start : 0\ pixdim : [-1. 2. 2. 2. 9.3 0. 0. 0. ]\ vox_offset : 0.0\ scl_slope : nan\ scl_inter : nan\ slice_end : 0\ slice_code : unknown\ xyzt_units : 10\ cal_max : 0.0\ cal_min : 0.0\ slice_duration : 0.0\ toffset : 0.0\ glmax : 0\ glmin : 0\ descrip : b'MRtrix version: 3.0.4'\ aux_file : b''\ qform_code : scanner\ sform_code : scanner\ quatern_b : 0.04166785\ quatern_c : -0.98789084\ quatern_d : -0.09628969\ qoffset_x : 120.80458\ qoffset_y : -76.53522\ qoffset_z : -124.99533\ srow_x : [-1.9407998e+00 -1.2063061e-01 4.6770102e-01 1.2080458e+02]\ srow_y : [ -0.20867568 1.9559684 -0.36144474 -76.53522 ]\ srow_z : [ 0.43560356 0.39954486 1.9106579 -124.99533 ]\ intent_name : b''\ magic : b'n+1'\ \ new_b0_path /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/gather_inputs/sub-FACT181_ses-pre_dwi_b0-09.nii.gz\ 250831-11:52:02,207 nipype.workflow INFO:\ [Node] Finished "gather_inputs", elapsed time 49.471149s.\ 250831-11:52:04,238 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.hmc_sdc_wf.enhance_pre_sdc" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/enhance_pre_sdc".\ 250831-11:52:04,238 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.hmc_sdc_wf.distorted_merge" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/distorted_merge".\ 250831-11:52:04,703 nipype.workflow INFO:\ [Node] Executing "enhance_pre_sdc" \ 250831-11:52:04,751 nipype.workflow INFO:\ [Node] Executing "distorted_merge" \ file none does not exist . \ 250831-11:52:06,185 nipype.workflow INFO:\ [Node] Finished "distorted_merge", elapsed time 1.432932s.\ 250831-11:52:08,447 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.hmc_sdc_wf.pre_eddy_b0_ref_wf.synthstrip_wf.pad_before_synthstrip_wf.skulled_1mm_resample" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/pre_eddy_b0_ref_wf/synthstrip_wf/pad_before_synthstrip_wf/skulled_1mm_resample".\ 250831-11:52:09,3 nipype.workflow INFO:\ [Node] Executing "skulled_1mm_resample" \ 250831-11:52:10,59 nipype.workflow INFO:\ [Node] Finished "skulled_1mm_resample", elapsed time 1.055506s.\ 250831-11:52:12,413 nipype.workflow INFO:\ [Node] Finished "enhance_pre_sdc", elapsed time 7.697186s.\ 250831-11:52:12,579 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.hmc_sdc_wf.pre_eddy_b0_ref_wf.synthstrip_wf.pad_before_synthstrip_wf.skulled_autobox" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/pre_eddy_b0_ref_wf/synthstrip_wf/pad_before_synthstrip_wf/skulled_autobox".\ 250831-11:52:13,121 nipype.workflow INFO:\ [Node] Executing "skulled_autobox" \ 250831-11:52:14,724 nipype.workflow INFO:\ [Node] Finished "skulled_autobox", elapsed time 1.6015709999999999s.\ 250831-11:52:16,187 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.hmc_sdc_wf.pre_eddy_b0_ref_wf.synthstrip_wf.pad_before_synthstrip_wf.prepare_synthstrip_reference" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/pre_eddy_b0_ref_wf/synthstrip_wf/pad_before_synthstrip_wf/prepare_synthstrip_reference".\ 250831-11:52:16,786 nipype.workflow INFO:\ [Node] Executing "prepare_synthstrip_reference" \ 250831-11:52:17,549 nipype.interface INFO:\ stderr 2025-08-31T11:52:17.549690:++ 3dZeropad: AFNI version=AFNI_23.0.07 (Mar 1 2023) [64-bit]\ 250831-11:52:18,91 nipype.interface INFO:\ stderr 2025-08-31T11:52:18.091816:++ output dataset: /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/pre_eddy_b0_ref_wf/synthstrip_wf/pad_before_synthstrip_wf/prepare_synthstrip_reference/topup_imain_resample_autobox_SynthStripGrid.nii\ 250831-11:52:18,627 nipype.workflow INFO:\ [Node] Finished "prepare_synthstrip_reference", elapsed time 1.81856s.\ 250831-11:52:20,291 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.hmc_sdc_wf.pre_eddy_b0_ref_wf.synthstrip_wf.pad_before_synthstrip_wf.resample_skulled_to_reference" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/pre_eddy_b0_ref_wf/synthstrip_wf/pad_before_synthstrip_wf/resample_skulled_to_reference".\ 250831-11:52:20,705 nipype.workflow INFO:\ [Node] Executing "resample_skulled_to_reference" \ 250831-11:52:28,480 nipype.workflow INFO:\ [Node] Finished "resample_skulled_to_reference", elapsed time 7.773059s.\ 250831-11:52:29,990 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.hmc_sdc_wf.pre_eddy_b0_ref_wf.synthstrip_wf.synthstrip" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/pre_eddy_b0_ref_wf/synthstrip_wf/synthstrip".\ 250831-11:52:30,143 nipype.workflow INFO:\ [Node] Executing "synthstrip" \ 250831-11:53:13,324 nipype.workflow INFO:\ [Node] Finished "synthstrip", elapsed time 43.179297s.\ 250831-11:53:14,62 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.hmc_sdc_wf.pre_eddy_b0_ref_wf.synthstrip_wf.mask_to_original_grid" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/pre_eddy_b0_ref_wf/synthstrip_wf/mask_to_original_grid".\ 250831-11:53:14,223 nipype.workflow INFO:\ [Node] Executing "mask_to_original_grid" \ 250831-11:53:14,631 nipype.interface INFO:\ current dir: /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/dwi_qc_wf/raw_gqi\ 250831-11:53:14,632 nipype.interface INFO:\ input src /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/dwi_qc_wf/raw_gqi/sub-FACT181_ses-pre_dwi_merged.src.gz\ 250831-11:53:14,632 nipype.interface INFO:\ split src name sub-FACT181_ses-pre_dwi_merged.src.gz\ 250831-11:53:14,632 nipype.interface INFO:\ search target: /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/dwi_qc_wf/raw_gqi/sub-FACT181_ses-pre_dwi_merged.src.gz*gqi*.fib.gz\ 250831-11:53:14,634 nipype.workflow INFO:\ [Node] Finished "raw_gqi", elapsed time 96.773587s.\ 250831-11:53:16,61 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.dwi_qc_wf.raw_fib_qc" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/dwi_qc_wf/raw_fib_qc".\ 250831-11:53:16,571 nipype.workflow INFO:\ [Node] Finished "mask_to_original_grid", elapsed time 2.346826s.\ 250831-11:53:16,784 nipype.workflow INFO:\ [Node] Executing "raw_fib_qc" \ 250831-11:53:18,118 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.hmc_sdc_wf.pre_eddy_b0_ref_wf.synthstrip_wf.mask_brain" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/pre_eddy_b0_ref_wf/synthstrip_wf/mask_brain".\ 250831-11:53:18,141 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.hmc_sdc_wf.eddy" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/eddy".\ 250831-11:53:18,245 nipype.workflow INFO:\ [Node] Executing "mask_brain" \ 250831-11:53:18,288 nipype.workflow INFO:\ [Node] Executing "eddy" \ 250831-11:53:19,315 nipype.workflow INFO:\ [Node] Finished "mask_brain", elapsed time 1.068449s.\ 250831-11:53:30,14 nipype.interface INFO:\ DSI Studio version: Hou "\uc0\u20399 " Aug 2 2024\ \uc0\u9484 \u9472 \u9472 \u55357 \u56543 command line\ \uc0\u9500 \u9472 \u9472 source=/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/dwi_qc_wf/raw_fib_qc/sub-FACT181_ses-pre_dwi_merged.src.gz.odf.gqi.1.25.fib.gz\ \uc0\u9500 \u9472 \u9472 action=qc\ \uc0\u9500 \u9472 \u9472 loop=/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/dwi_qc_wf/raw_fib_qc/sub-FACT181_ses-pre_dwi_merged.src.gz.odf.gqi.1.25.fib.gz\ \uc0\u9500 \u9472 \u9472 \u9516 \u9472 \u9472 \u55357 \u56543 run qc\ \uc0\u9474 \u9500 \u9472 \u9472 is_fib=1\ \uc0\u9474 \u9500 \u9472 \u9472 output=qc.txt\ \uc0\u9474 \u9500 \u9472 \u9472 \u55357 \u56510 saving qc.txt\ \uc0\u9474 \u9500 \u9472 \u9472 \u9516 \u9472 \u9472 \u55357 \u56543 checking FIB files\ \uc0\u9474 \u9474 \u9500 \u9472 \u9472 \u9516 \u9472 \u9472 \u55357 \u56514 opening sub-FACT181_ses-pre_dwi_merged.src.gz.odf.gqi.1.25.fib.gz\ \uc0\u9474 \u9474 \u9474 \u9500 \u9472 \u9472 prepare index file for future accelerated loading\ \uc0\u9474 \u9474 \u9474 \u9500 \u9472 \u9472 \u55357 \u56510 saving index file for accelerated loading: sub-FACT181_ses-pre_dwi_merged.src.gz.odf.gqi.1.25.fib.gz.idx\ \uc0\u9474 \u9474 \u9474 \u9500 \u9472 \u9472 \u9516 \u9472 \u9472 \u55357 \u56543 loading image volumes\ \uc0\u9474 \u9474 \u9474 \u9474 \u9492 \u9472 \u9472 \u9201 31ms\ \uc0\u9474 \u9474 \u9474 \u9500 \u9472 \u9472 matched template: ICBM152_adult\ \uc0\u9474 \u9474 \u9474 \u9492 \u9472 \u9472 \u9201 12.401s\ \uc0\u9474 \u9474 \u9492 \u9472 \u9472 \u9201 12.732s\ \uc0\u9474 \u9492 \u9472 \u9472 \u9201 12.975s\ \uc0\u9492 \u9472 \u9472 \u9201 13.043s\ \ 250831-11:53:30,17 nipype.workflow INFO:\ [Node] Finished "raw_fib_qc", elapsed time 13.209458s.\ 250831-11:53:32,330 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.dwi_qc_wf.merged_qc" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/dwi_qc_wf/merged_qc".\ 250831-11:53:33,398 nipype.workflow INFO:\ [Node] Executing "merged_qc" \ 250831-11:53:33,637 nipype.workflow INFO:\ [Node] Finished "merged_qc", elapsed time 0.216255s.\ 250831-11:54:27,692 nipype.interface INFO:\ current dir: /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_qc_wf/raw_gqi\ 250831-11:54:27,692 nipype.interface INFO:\ input src /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_qc_wf/raw_gqi/sub-FACT181_ses-pre_dwi_merged.src.gz\ 250831-11:54:27,692 nipype.interface INFO:\ split src name sub-FACT181_ses-pre_dwi_merged.src.gz\ 250831-11:54:27,693 nipype.interface INFO:\ search target: /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_qc_wf/raw_gqi/sub-FACT181_ses-pre_dwi_merged.src.gz*gqi*.fib.gz\ 250831-11:54:27,694 nipype.workflow INFO:\ [Node] Finished "raw_gqi", elapsed time 169.686688s.\ 250831-11:54:28,311 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.raw_fib_qc" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_qc_wf/raw_fib_qc".\ 250831-11:54:28,678 nipype.workflow INFO:\ [Node] Executing "raw_fib_qc" \ 250831-11:54:42,709 nipype.interface INFO:\ DSI Studio version: Hou "\uc0\u20399 " Aug 2 2024\ \uc0\u9484 \u9472 \u9472 \u55357 \u56543 command line\ \uc0\u9500 \u9472 \u9472 source=/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_qc_wf/raw_fib_qc/sub-FACT181_ses-pre_dwi_merged.src.gz.odf.gqi.1.25.fib.gz\ \uc0\u9500 \u9472 \u9472 action=qc\ \uc0\u9500 \u9472 \u9472 loop=/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_qc_wf/raw_fib_qc/sub-FACT181_ses-pre_dwi_merged.src.gz.odf.gqi.1.25.fib.gz\ \uc0\u9500 \u9472 \u9472 \u9516 \u9472 \u9472 \u55357 \u56543 run qc\ \uc0\u9474 \u9500 \u9472 \u9472 is_fib=1\ \uc0\u9474 \u9500 \u9472 \u9472 output=qc.txt\ \uc0\u9474 \u9500 \u9472 \u9472 \u55357 \u56510 saving qc.txt\ \uc0\u9474 \u9500 \u9472 \u9472 \u9516 \u9472 \u9472 \u55357 \u56543 checking FIB files\ \uc0\u9474 \u9474 \u9500 \u9472 \u9472 \u9516 \u9472 \u9472 \u55357 \u56514 opening sub-FACT181_ses-pre_dwi_merged.src.gz.odf.gqi.1.25.fib.gz\ \uc0\u9474 \u9474 \u9474 \u9500 \u9472 \u9472 prepare index file for future accelerated loading\ \uc0\u9474 \u9474 \u9474 \u9500 \u9472 \u9472 \u55357 \u56510 saving index file for accelerated loading: sub-FACT181_ses-pre_dwi_merged.src.gz.odf.gqi.1.25.fib.gz.idx\ \uc0\u9474 \u9474 \u9474 \u9500 \u9472 \u9472 \u9516 \u9472 \u9472 \u55357 \u56543 loading image volumes\ \uc0\u9474 \u9474 \u9474 \u9474 \u9492 \u9472 \u9472 \u9201 21ms\ \uc0\u9474 \u9474 \u9474 \u9500 \u9472 \u9472 matched template: ICBM152_adult\ \uc0\u9474 \u9474 \u9474 \u9492 \u9472 \u9472 \u9201 13.767s\ \uc0\u9474 \u9474 \u9492 \u9472 \u9472 \u9201 13.894s\ \uc0\u9474 \u9492 \u9472 \u9472 \u9201 13.918s\ \uc0\u9492 \u9472 \u9472 \u9201 13.943s\ \ 250831-11:54:42,711 nipype.workflow INFO:\ [Node] Finished "raw_fib_qc", elapsed time 14.025284s.\ 250831-11:54:44,435 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.merged_qc" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_qc_wf/merged_qc".\ 250831-11:54:45,164 nipype.workflow INFO:\ [Node] Executing "merged_qc" \ 250831-11:54:45,349 nipype.workflow INFO:\ [Node] Finished "merged_qc", elapsed time 0.162286s.\ 250831-11:54:49,407 nipype.interface INFO:\ Report - setting fixed (/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/anat_normalization_wf/acpc_reg/fixed_masked.nii.gz) and moving (/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/anat_normalization_wf/acpc_reg/transform_Warped.nii.gz) images\ 250831-11:54:49,449 nipype.workflow INFO:\ [Node] Finished "acpc_reg", elapsed time 233.803928s.\ 250831-11:54:52,120 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.anat_normalization_wf.disassemble_transform" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/anat_normalization_wf/disassemble_transform".\ 250831-11:54:52,157 nipype.workflow INFO:\ [Node] Executing "disassemble_transform" \ 250831-11:54:52,173 nipype.interface INFO:\ CompositeTransformUtil --disassemble /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/anat_normalization_wf/acpc_reg/transformComposite.h5 disassemble\ 250831-11:54:52,369 nipype.workflow INFO:\ [Node] Finished "disassemble_transform", elapsed time 0.211034s.\ 250831-11:54:54,88 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.anat_normalization_wf.extract_rigid_transform" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/anat_normalization_wf/extract_rigid_transform".\ 250831-11:54:54,126 nipype.workflow INFO:\ [Node] Executing "extract_rigid_transform" \ 250831-11:54:54,174 nipype.workflow INFO:\ [Node] Finished "extract_rigid_transform", elapsed time 0.047124s.\ 250831-11:54:56,70 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.anat_normalization_wf.rigid_acpc_resample_anat" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/anat_normalization_wf/rigid_acpc_resample_anat".\ 250831-11:54:56,70 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.anat_normalization_wf.rigid_acpc_resample_mask" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/anat_normalization_wf/rigid_acpc_resample_mask".\ 250831-11:54:56,78 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.rigid_acpc_resample_brain" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/rigid_acpc_resample_brain".\ 250831-11:54:56,78 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.rigid_acpc_resample_mask" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/rigid_acpc_resample_mask".\ 250831-11:54:56,79 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.rigid_acpc_resample_head" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/rigid_acpc_resample_head".\ 250831-11:54:56,111 nipype.workflow INFO:\ [Node] Executing "rigid_acpc_resample_mask" \ 250831-11:54:56,130 nipype.workflow INFO:\ [Node] Executing "rigid_acpc_resample_head" \ 250831-11:54:56,198 nipype.workflow INFO:\ [Node] Executing "rigid_acpc_resample_brain" \ 250831-11:54:56,198 nipype.workflow INFO:\ [Node] Executing "rigid_acpc_resample_anat" \ 250831-11:54:56,266 nipype.workflow INFO:\ [Node] Executing "rigid_acpc_resample_mask" \ 250831-11:55:17,582 nipype.workflow INFO:\ [Node] Finished "rigid_acpc_resample_head", elapsed time 21.450252s.\ 250831-11:55:34,943 nipype.workflow INFO:\ [Node] Finished "rigid_acpc_resample_brain", elapsed time 38.743952s.\ 250831-11:55:42,155 nipype.workflow INFO:\ [Node] Finished "rigid_acpc_resample_anat", elapsed time 45.955592s.\ 250831-11:55:45,523 nipype.workflow INFO:\ [Node] Finished "rigid_acpc_resample_mask", elapsed time 49.253677s.\ 250831-11:55:48,240 nipype.interface WARNING:\ Changing /out/sub-FACT181/anat/sub-FACT181_space-ACPC_desc-brain_mask.nii.gz dtype from float64 to uint8\ 250831-11:56:14,78 nipype.workflow INFO:\ [Node] Finished "rigid_acpc_resample_mask", elapsed time 77.965665s.\ 250831-11:56:14,685 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.anat_normalization_wf.anat_nlin_normalization" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/anat_normalization_wf/anat_nlin_normalization".\ 250831-11:56:14,715 nipype.workflow INFO:\ [Node] Executing "anat_nlin_normalization" \ 250831-12:09:33,584 nipype.workflow INFO:\ [Node] Finished "synthseg", elapsed time 1145.945663s.\ 250831-12:09:35,423 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.rigid_acpc_resample_aseg" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/rigid_acpc_resample_aseg".\ 250831-12:09:36,529 nipype.workflow INFO:\ [Node] Executing "rigid_acpc_resample_aseg" \ 250831-12:11:52,12 nipype.workflow INFO:\ [Node] Finished "rigid_acpc_resample_aseg", elapsed time 135.460682s.\ 250831-12:11:55,13 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.acpc_aseg_to_dseg" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/acpc_aseg_to_dseg".\ 250831-12:11:55,222 nipype.workflow INFO:\ [Node] Executing "acpc_aseg_to_dseg" \ 250831-12:11:55,886 nipype.interface WARNING:\ Changing /out/sub-FACT181/anat/sub-FACT181_space-ACPC_desc-aseg_dseg.nii.gz dtype from float64 to int16\ 250831-12:12:00,344 nipype.workflow INFO:\ [Node] Finished "acpc_aseg_to_dseg", elapsed time 2.995683s.\ 250831-12:12:01,769 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.seg2msks" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/seg2msks".\ 250831-12:12:02,265 nipype.workflow INFO:\ [Node] Executing "seg2msks" \ 250831-12:12:02,869 nipype.interface WARNING:\ Changing /out/sub-FACT181/anat/sub-FACT181_space-ACPC_dseg.nii.gz dtype from uint32 to int16\ 250831-12:12:03,454 nipype.workflow INFO:\ [Node] Finished "seg2msks", elapsed time 1.169667s.\ 250831-12:12:06,136 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.anat_preproc_wf.seg_rpt" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/anat_preproc_wf/seg_rpt".\ 250831-12:12:06,239 nipype.workflow INFO:\ [Node] Executing "seg_rpt" \ 250831-12:12:51,675 nipype.workflow INFO:\ [Node] Finished "seg_rpt", elapsed time 45.434916s.\ 250831-12:14:32,203 nipype.workflow INFO:\ [Node] Finished "eddy", elapsed time 1273.913184s.\ 250831-12:14:32,376 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.hmc_sdc_wf.back_to_lps" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/back_to_lps".\ 250831-12:14:32,377 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.hmc_sdc_wf.cnr_lps" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/cnr_lps".\ 250831-12:14:32,377 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.hmc_sdc_wf.spm_motion" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/spm_motion".\ 250831-12:14:32,711 nipype.workflow INFO:\ [Node] Executing "spm_motion" \ 250831-12:14:34,571 nipype.workflow INFO:\ [Node] Finished "spm_motion", elapsed time 1.837658s.\ 250831-12:14:34,647 nipype.workflow INFO:\ [Node] Executing "back_to_lps" \ 250831-12:14:34,692 nipype.workflow INFO:\ [Node] Executing "cnr_lps" \ 250831-12:14:34,851 nipype.interface INFO:\ Re-orienting /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/eddy/eddy_corrected.eddy_cnr_maps.nii.gz to LPS\ 250831-12:14:34,875 nipype.interface INFO:\ Re-orienting /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/eddy/eddy_corrected.nii.gz to LPS\ 250831-12:14:35,921 nipype.workflow INFO:\ [Node] Finished "cnr_lps", elapsed time 1.227231s.\ 250831-12:14:36,403 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.dwi_confs_wf.fdisp" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/dwi_confs_wf/fdisp".\ 250831-12:14:36,552 nipype.workflow INFO:\ [Node] Executing "fdisp" \ 250831-12:14:41,954 nipype.workflow INFO:\ [Node] Finished "fdisp", elapsed time 5.379071s.\ 250831-12:14:42,796 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_finalize_ses_pre_wf.transform_dwis_t1.cnr_image_type" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_finalize_ses_pre_wf/transform_dwis_t1/cnr_image_type".\ 250831-12:14:42,817 nipype.interface INFO:\ Reorienting /work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/eddy/eddy_corrected.eddy_rotated_bvecs to LPS\ 250831-12:14:42,825 nipype.workflow INFO:\ [Node] Finished "back_to_lps", elapsed time 8.155122s.\ 250831-12:14:42,855 nipype.workflow INFO:\ [Node] Executing "cnr_image_type" \ 250831-12:14:42,906 nipype.workflow INFO:\ [Node] Finished "cnr_image_type", elapsed time 0.050002s.\ 250831-12:14:44,864 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.hmc_sdc_wf.split_eddy_lps" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/split_eddy_lps".\ 250831-12:14:44,865 nipype.workflow INFO:\ [Node] Setting-up "qsiprep_1_0_wf.sub_FACT181_ses_pre_wf.dwi_preproc_ses_pre_wf.hmc_sdc_wf.extract_b0_series" in "/work/qsiprep_1_0_wf/sub_FACT181_ses_pre_wf/dwi_preproc_ses_pre_wf/hmc_sdc_wf/extract_b0_series".\ 250831-12:14:44,900 nipype.workflow INFO:\ [Node] Executing "split_eddy_lps" \ 250831-12:14:44,912 nipype.workflow INFO:\ [Node] Executing "extract_b0_series" \ }