Hierarchy : fmriprep_wf.single_subject_xxx_wf.anat_preproc_wf.anat_norm_wf.registration
 Exec ID : registration.a0


Original Inputs
---------------


* explicit_masking : True
* flavor : precise
* float : True
* initial_moving_transform : <undefined>
* lesion_mask : <undefined>
* moving : T1w
* moving_image : /data/cephfs/punim0185/tia_100_work/fmriprep_wf/single_subject_xxx_wf/anat_preproc_wf/anat_norm_wf/_template_MNI152NLin2009cAsym/trunc_mov/sub-xxx_T1w_corrected_xform_maths.nii.gz
* moving_mask : /data/cephfs/punim0185/tia_100_work/fmriprep_wf/single_subject_xxx_wf/anat_preproc_wf/surface_recon_wf/refine/sub-xxx_T1w_corrected_xform_rbrainmask.nii.gz
* num_threads : 3
* orientation : RAS
* reference : T1w
* reference_image : <undefined>
* reference_mask : <undefined>
* settings : <undefined>
* template : MNI152NLin2009cAsym
* template_resolution : <undefined>
* template_spec : {}

Execution Inputs
----------------


* explicit_masking : True
* flavor : precise
* float : True
* initial_moving_transform : <undefined>
* lesion_mask : <undefined>
* moving : T1w
* moving_image : /data/cephfs/punim0185/tia_100_work/fmriprep_wf/single_subject_xxx_wf/anat_preproc_wf/anat_norm_wf/_template_MNI152NLin2009cAsym/trunc_mov/sub-xxx_T1w_corrected_xform_maths.nii.gz
* moving_mask : /data/cephfs/punim0185/tia_100_work/fmriprep_wf/single_subject_xxx_wf/anat_preproc_wf/surface_recon_wf/refine/sub-xxx_T1w_corrected_xform_rbrainmask.nii.gz
* num_threads : 3
* orientation : RAS
* reference : T1w
* reference_image : <undefined>
* reference_mask : <undefined>
* settings : <undefined>
* template : MNI152NLin2009cAsym
* template_resolution : <undefined>
* template_spec : {'suffix': 'T1w', 'desc': None, 'atlas': None, 'resolution': 1}


Execution Outputs
-----------------


* composite_transform : /data/cephfs/punim0185/tia_100_work/fmriprep_wf/single_subject_xxx_wf/anat_preproc_wf/anat_norm_wf/_template_MNI152NLin2009cAsym/registration/ants_t1_to_mniComposite.h5
* elapsed_time : <undefined>
* forward_invert_flags : <undefined>
* forward_transforms : <undefined>
* inverse_composite_transform : /data/cephfs/punim0185/tia_100_work/fmriprep_wf/single_subject_xxx_wf/anat_preproc_wf/anat_norm_wf/_template_MNI152NLin2009cAsym/registration/ants_t1_to_mniInverseComposite.h5
* inverse_warped_image : <undefined>
* metric_value : <undefined>
* reference_image : <undefined>
* reverse_invert_flags : <undefined>
* reverse_transforms : <undefined>
* save_state : <undefined>
* warped_image : <undefined>


Runtime info
------------


* duration : 5341.249906
* hostname : spartan-rc014.hpc.unimelb.edu.au
* prev_wd : /home/petergoodin/scripts/fmriprep/tia_100_fmriprep
* working_dir : /data/cephfs/punim0185/tia_100_work/fmriprep_wf/single_subject_xxx_wf/anat_preproc_wf/anat_norm_wf/_template_MNI152NLin2009cAsym/registration


Environment
~~~~~~~~~~~


* AFNI_IMSAVE_WARNINGS : NO
* AFNI_MODELPATH : /usr/lib/afni/models
* AFNI_PLUGINPATH : /usr/lib/afni/plugins
* AFNI_TTATLAS_DATASET : /usr/share/afni/atlases
* ANTSPATH : /usr/lib/ants
* CPATH : /usr/local/miniconda/include/:
* FREESURFER_HOME : /opt/freesurfer
* FSF_OUTPUT_FORMAT : nii.gz
* FSLDIR : /usr/share/fsl/5.0
* FSLMULTIFILEQUIT : TRUE
* FSLOUTPUTTYPE : NIFTI_GZ
* FSLTCLSH : /usr/bin/tclsh
* FSLWISH : /usr/bin/wish
* FSL_DIR : /usr/share/fsl/5.0
* FS_LICENSE : /data/cephfs/punim0185/s_images/license.txt
* FS_OVERRIDE : 0
* FUNCTIONALS_DIR : /opt/freesurfer/sessions
* HOME : /home/fmriprep
* IS_DOCKER_8395080871 : 1
* LANG : C.UTF-8
* LC_ALL : C.UTF-8
* LD_LIBRARY_PATH : /usr/lib/fsl/5.0::/.singularity.d/libs
* LOCAL_DIR : /opt/freesurfer/local
* MINC_BIN_DIR : /opt/freesurfer/mni/bin
* MINC_LIB_DIR : /opt/freesurfer/mni/lib
* MKL_NUM_THREADS : 1
* MKL_THREADING_LAYER : INTEL
* MNI_DATAPATH : /opt/freesurfer/mni/data
* MNI_DIR : /opt/freesurfer/mni
* MNI_PERL5LIB : /opt/freesurfer/mni/lib/perl5/5.8.5
* OMP_NUM_THREADS : 1
* OS : Linux
* PATH : /usr/local/miniconda/bin:/opt/ICA-AROMA:/usr/lib/ants:/usr/lib/fsl/5.0:/usr/lib/afni/bin:/opt/freesurfer/bin:/bin:/opt/freesurfer/tktools:/opt/freesurfer/mni/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin
* PERL5LIB : /opt/freesurfer/mni/lib/perl5/5.8.5
* POSSUMDIR : /usr/share/fsl/5.0
* PS1 : Singularity>
* PWD : /home/petergoodin/scripts/fmriprep/tia_100_fmriprep
* PYTHONNOUSERSITE : 1
* SINGULARITY_CONTAINER : fmriprep-1.4.1.simg
* SINGULARITY_NAME : fmriprep-1.4.1.simg
* SUBJECTS_DIR : /opt/freesurfer/subjects
* TERM : xterm-256color
* __KMP_REGISTERED_LIB_3142 : 0x7fcb151dfd08-cafe6984-libiomp5.so