Node: cpac_678314_pre.nuisance_regressors_defaultNoGSR_163.build_nuisance_regressors Working directory: /gpfs/scratch/martil42/ost_fix/working/pipeline_cpac-ost-fix/cpac_678314_pre/nuisance_regressors_defaultNoGSR_163/_scan_fix_acq-normal_run-01/build_nuisance_regressors Node inputs: acompcor_file_path = /gpfs/scratch/martil42/ost_fix/working/pipeline_cpac-ost-fix/cpac_678314_pre/nuisance_regressors_defaultNoGSR_163/_scan_fix_acq-normal_run-01/aCompCor_DetrendPC/compcor_regressors.1D censor_file_path = csf_summary_file_path = /gpfs/scratch/martil42/ost_fix/working/pipeline_cpac-ost-fix/cpac_678314_pre/nuisance_regressors_defaultNoGSR_163/_scan_fix_acq-normal_run-01/CerebrospinalFluid_mean/sub-678314_ses-pre_task-fix_acq-normal_run-01_bold_resample_calc_tshift_volreg_calc_maths_flirt_roistat.1D custom_file_paths = function_str = CPAC.nuisance.nuisance.gather_nuisance functional_file_path = /gpfs/scratch/martil42/ost_fix/working/pipeline_cpac-ost-fix/cpac_678314_pre/_scan_fix_acq-normal_run-01/func_normalize_127/sub-678314_ses-pre_task-fix_acq-normal_run-01_bold_resample_calc_tshift_volreg_calc_maths.nii.gz global_summary_file_path = grey_matter_summary_file_path = motion_parameters_file_path = /gpfs/scratch/martil42/ost_fix/working/pipeline_cpac-ost-fix/cpac_678314_pre/_scan_fix_acq-normal_run-01/func_motion_correct_3dvolreg_116/sub-678314_ses-pre_task-fix_acq-normal_run-01_bold_resample_calc_tshift.1D selector = {'Name': 'defaultNoGSR', 'Motion': {'include_delayed': True, 'include_squared': True, 'include_delayed_squared': True}, 'aCompCor': {'summary': {'method': 'DetrendPC', 'components': 5}, 'tissues': ['WhiteMatter', 'CerebrospinalFluid'], 'extraction_resolution': 2}, 'CerebrospinalFluid': {'summary': {'filter': 'Mean', 'method': 'Mean'}, 'extraction_resolution': 2, 'erode_mask': True}, 'PolyOrt': {'degree': 2}, 'Bandpass': {'bottom_frequency': 0.01, 'top_frequency': 0.1, 'method': 'default'}} tcompcor_file_path = white_matter_summary_file_path = Traceback (most recent call last): File "/usr/share/fsl/6.0/lib/python3.10/site-packages/nipype/pipeline/plugins/linear.py", line 47, in run node.run(updatehash=updatehash) File "/code/CPAC/pipeline/nipype_pipeline_engine/engine.py", line 443, in run return super().run(updatehash) File "/usr/share/fsl/6.0/lib/python3.10/site-packages/nipype/pipeline/engine/nodes.py", line 527, in run result = self._run_interface(execute=True) File "/usr/share/fsl/6.0/lib/python3.10/site-packages/nipype/pipeline/engine/nodes.py", line 645, in _run_interface return self._run_command(execute) File "/usr/share/fsl/6.0/lib/python3.10/site-packages/nipype/pipeline/engine/nodes.py", line 771, in _run_command raise NodeExecutionError(msg) nipype.pipeline.engine.nodes.NodeExecutionError: Exception raised while executing Node build_nuisance_regressors. Traceback: Traceback (most recent call last): File "/code/CPAC/pipeline/nipype_pipeline_engine/monkeypatch.py", line 40, in run runtime = self._run_interface(runtime) File "/code/CPAC/utils/interfaces/function/function.py", line 216, in _run_interface out = function_handle(**args) File "/code/CPAC/nuisance/nuisance.py", line 294, in gather_nuisance raise ValueError("Number of time points in {0} ({1}) is " ValueError: Number of time points in /gpfs/scratch/martil42/ost_fix/working/pipeline_cpac-ost-fix/cpac_678314_pre/nuisance_regressors_defaultNoGSR_163/_scan_fix_acq-normal_run-01/CerebrospinalFluid_mean/sub-678314_ses-pre_task-fix_acq-normal_run-01_bold_resample_calc_tshift_volreg_calc_maths_flirt_roistat.1D (0) is inconsistent with length of functional file /gpfs/scratch/martil42/ost_fix/working/pipeline_cpac-ost-fix/cpac_678314_pre/_scan_fix_acq-normal_run-01/func_normalize_127/sub-678314_ses-pre_task-fix_acq-normal_run-01_bold_resample_calc_tshift_volreg_calc_maths.nii.gz (525)