Errors Node Name: fmriprep_23_0_wf.single_subject_wlsubj023_wf.func_preproc_ses_nyu3t01_task_prf_acq_PA_run_01_wf.ica_aroma_wf.ica_aroma File: /out/sub-wlsubj023/log/20230317-000730_33642929-b1d6-44f0-bf97-598785f7a6bf/crash-20230317-021843-root-ica_aroma-8332d71f-b22d-4de1-a09c-f338e69fdd2b.txt Working Directory: /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_01_wf/ica_aroma_wf/ica_aroma Inputs: TR: 1.0 args: -np compress_report: auto denoise_type: nonaggr dim: environ: {} feat_dir: fnirt_warp_file: in_file: mask: mat_file: melodic_dir: motion_parameters: out_dir: out out_report: ica_aroma_reportlet.svg report_mask: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node result["result"] = node.run(updatehash=updatehash) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 527, in run result = self._run_interface(execute=True) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 645, in _run_interface return self._run_command(execute) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 771, in _run_command raise NodeExecutionError(msg) nipype.pipeline.engine.nodes.NodeExecutionError: Exception raised while executing Node ica_aroma. Cmdline: ICA_AROMA.py -tr 1.000 -np -den nonaggr -i /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_01_wf/ica_aroma_wf/smooth/vol0000_xform-00000_clipped_merged_smooth.nii.gz -m /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_01_wf/bold_std_trans_wf/_std_target_MNI152NLin6Asym.res2/mask_std_tfm/vol0000_unwarped_merged_valid_average_corrected_brain_mask_maths_trans.nii.gz -meldir /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_01_wf/ica_aroma_wf/melodic -mc /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_01_wf/bold_hmc_wf/normalize_motion/motion_params.txt -o /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_01_wf/ica_aroma_wf/ica_aroma/out Stdout: ------------------------------- RUNNING ICA-AROMA ------------------------------- --------------- 'ICA-based Automatic Removal Of Motion Artifacts' --------------- Warning! Please check whether the determined TR (of 1.0s) is correct! Step 1) MELODIC - The existing/specified MELODIC directory will be used. Stderr: Traceback (most recent call last): File "/opt/ICA-AROMA/ICA_AROMA.py", line 204, in aromafunc.runICA(fslDir, inFile, outDir, melDir, mask, dim, TR) File "/opt/ICA-AROMA/ICA_AROMA_functions.py", line 55, in runICA os.symlink(melDirIn, melDir) OSError: [Errno 95] Operation not supported: '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_01_wf/ica_aroma_wf/melodic' -> '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_01_wf/ica_aroma_wf/ica_aroma/out/melodic.ica' Traceback: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 454, in aggregate_outputs setattr(outputs, key, val) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/traits_extension.py", line 330, in validate value = super(File, self).validate(objekt, name, value, return_pathlike=True) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/traits_extension.py", line 135, in validate self.error(objekt, name, str(value)) File "/opt/conda/lib/python3.9/site-packages/traits/base_trait_handler.py", line 74, in error raise TraitError( traits.trait_errors.TraitError: The 'nonaggr_denoised_file' trait of a _ICA_AROMAOutputSpecRPT instance must be a pathlike object or string representing an existing file, but a value of '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_01_wf/ica_aroma_wf/ica_aroma/out/denoised_func_data_nonaggr.nii.gz' was specified. During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 399, in run runtime = self._post_run_hook(runtime) File "/opt/conda/lib/python3.9/site-packages/niworkflows/interfaces/reportlets/segmentation.py", line 231, in _post_run_hook outputs = self.aggregate_outputs(runtime=runtime) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 461, in aggregate_outputs raise FileNotFoundError(msg) FileNotFoundError: No such file or directory '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_01_wf/ica_aroma_wf/ica_aroma/out/denoised_func_data_nonaggr.nii.gz' for output 'nonaggr_denoised_file' of a ICA_AROMARPT interface Node Name: fmriprep_23_0_wf.single_subject_wlsubj023_wf.func_preproc_ses_nyu3t01_task_prf_acq_PA_run_02_wf.ica_aroma_wf.ica_aroma File: /out/sub-wlsubj023/log/20230317-000730_33642929-b1d6-44f0-bf97-598785f7a6bf/crash-20230317-022425-root-ica_aroma-bb433108-55f1-4e66-9ee7-6987e8b2cb47.txt Working Directory: /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_02_wf/ica_aroma_wf/ica_aroma Inputs: TR: 1.0 args: -np compress_report: auto denoise_type: nonaggr dim: environ: {} feat_dir: fnirt_warp_file: in_file: mask: mat_file: melodic_dir: motion_parameters: out_dir: out out_report: ica_aroma_reportlet.svg report_mask: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node result["result"] = node.run(updatehash=updatehash) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 527, in run result = self._run_interface(execute=True) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 645, in _run_interface return self._run_command(execute) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 771, in _run_command raise NodeExecutionError(msg) nipype.pipeline.engine.nodes.NodeExecutionError: Exception raised while executing Node ica_aroma. Cmdline: ICA_AROMA.py -tr 1.000 -np -den nonaggr -i /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_02_wf/ica_aroma_wf/smooth/vol0000_xform-00000_clipped_merged_smooth.nii.gz -m /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_02_wf/bold_std_trans_wf/_std_target_MNI152NLin6Asym.res2/mask_std_tfm/vol0000_unwarped_merged_valid_average_corrected_brain_mask_maths_trans.nii.gz -meldir /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_02_wf/ica_aroma_wf/melodic -mc /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_02_wf/bold_hmc_wf/normalize_motion/motion_params.txt -o /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_02_wf/ica_aroma_wf/ica_aroma/out Stdout: ------------------------------- RUNNING ICA-AROMA ------------------------------- --------------- 'ICA-based Automatic Removal Of Motion Artifacts' --------------- Warning! Please check whether the determined TR (of 1.0s) is correct! Step 1) MELODIC - The existing/specified MELODIC directory will be used. Stderr: Traceback (most recent call last): File "/opt/ICA-AROMA/ICA_AROMA.py", line 204, in aromafunc.runICA(fslDir, inFile, outDir, melDir, mask, dim, TR) File "/opt/ICA-AROMA/ICA_AROMA_functions.py", line 55, in runICA os.symlink(melDirIn, melDir) OSError: [Errno 95] Operation not supported: '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_02_wf/ica_aroma_wf/melodic' -> '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_02_wf/ica_aroma_wf/ica_aroma/out/melodic.ica' Traceback: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 454, in aggregate_outputs setattr(outputs, key, val) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/traits_extension.py", line 330, in validate value = super(File, self).validate(objekt, name, value, return_pathlike=True) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/traits_extension.py", line 135, in validate self.error(objekt, name, str(value)) File "/opt/conda/lib/python3.9/site-packages/traits/base_trait_handler.py", line 74, in error raise TraitError( traits.trait_errors.TraitError: The 'nonaggr_denoised_file' trait of a _ICA_AROMAOutputSpecRPT instance must be a pathlike object or string representing an existing file, but a value of '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_02_wf/ica_aroma_wf/ica_aroma/out/denoised_func_data_nonaggr.nii.gz' was specified. During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 399, in run runtime = self._post_run_hook(runtime) File "/opt/conda/lib/python3.9/site-packages/niworkflows/interfaces/reportlets/segmentation.py", line 231, in _post_run_hook outputs = self.aggregate_outputs(runtime=runtime) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 461, in aggregate_outputs raise FileNotFoundError(msg) FileNotFoundError: No such file or directory '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_02_wf/ica_aroma_wf/ica_aroma/out/denoised_func_data_nonaggr.nii.gz' for output 'nonaggr_denoised_file' of a ICA_AROMARPT interface Node Name: fmriprep_23_0_wf.single_subject_wlsubj023_wf.func_preproc_ses_nyu3t01_task_prf_acq_PA_run_03_wf.ica_aroma_wf.ica_aroma File: /out/sub-wlsubj023/log/20230317-000730_33642929-b1d6-44f0-bf97-598785f7a6bf/crash-20230317-022651-root-ica_aroma-2ba67b43-3c6b-4b83-bbf2-d658b9c98ccd.txt Working Directory: /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_03_wf/ica_aroma_wf/ica_aroma Inputs: TR: 1.0 args: -np compress_report: auto denoise_type: nonaggr dim: environ: {} feat_dir: fnirt_warp_file: in_file: mask: mat_file: melodic_dir: motion_parameters: out_dir: out out_report: ica_aroma_reportlet.svg report_mask: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node result["result"] = node.run(updatehash=updatehash) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 527, in run result = self._run_interface(execute=True) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 645, in _run_interface return self._run_command(execute) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 771, in _run_command raise NodeExecutionError(msg) nipype.pipeline.engine.nodes.NodeExecutionError: Exception raised while executing Node ica_aroma. Cmdline: ICA_AROMA.py -tr 1.000 -np -den nonaggr -i /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_03_wf/ica_aroma_wf/smooth/vol0000_xform-00000_clipped_merged_cut_smooth.nii.gz -m /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_03_wf/bold_std_trans_wf/_std_target_MNI152NLin6Asym.res2/mask_std_tfm/vol0000_unwarped_merged_valid_average_corrected_brain_mask_maths_trans.nii.gz -meldir /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_03_wf/ica_aroma_wf/melodic -mc /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_03_wf/bold_hmc_wf/normalize_motion/motion_params.txt -o /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_03_wf/ica_aroma_wf/ica_aroma/out Stdout: ------------------------------- RUNNING ICA-AROMA ------------------------------- --------------- 'ICA-based Automatic Removal Of Motion Artifacts' --------------- Warning! Please check whether the determined TR (of 1.0s) is correct! Step 1) MELODIC - The existing/specified MELODIC directory will be used. Stderr: Traceback (most recent call last): File "/opt/ICA-AROMA/ICA_AROMA.py", line 204, in aromafunc.runICA(fslDir, inFile, outDir, melDir, mask, dim, TR) File "/opt/ICA-AROMA/ICA_AROMA_functions.py", line 55, in runICA os.symlink(melDirIn, melDir) OSError: [Errno 95] Operation not supported: '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_03_wf/ica_aroma_wf/melodic' -> '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_03_wf/ica_aroma_wf/ica_aroma/out/melodic.ica' Traceback: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 454, in aggregate_outputs setattr(outputs, key, val) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/traits_extension.py", line 330, in validate value = super(File, self).validate(objekt, name, value, return_pathlike=True) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/traits_extension.py", line 135, in validate self.error(objekt, name, str(value)) File "/opt/conda/lib/python3.9/site-packages/traits/base_trait_handler.py", line 74, in error raise TraitError( traits.trait_errors.TraitError: The 'nonaggr_denoised_file' trait of a _ICA_AROMAOutputSpecRPT instance must be a pathlike object or string representing an existing file, but a value of '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_03_wf/ica_aroma_wf/ica_aroma/out/denoised_func_data_nonaggr.nii.gz' was specified. During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 399, in run runtime = self._post_run_hook(runtime) File "/opt/conda/lib/python3.9/site-packages/niworkflows/interfaces/reportlets/segmentation.py", line 231, in _post_run_hook outputs = self.aggregate_outputs(runtime=runtime) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 461, in aggregate_outputs raise FileNotFoundError(msg) FileNotFoundError: No such file or directory '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_03_wf/ica_aroma_wf/ica_aroma/out/denoised_func_data_nonaggr.nii.gz' for output 'nonaggr_denoised_file' of a ICA_AROMARPT interface Node Name: fmriprep_23_0_wf.single_subject_wlsubj023_wf.func_preproc_ses_nyu3t01_task_prf_acq_PA_run_04_wf.ica_aroma_wf.ica_aroma File: /out/sub-wlsubj023/log/20230317-000730_33642929-b1d6-44f0-bf97-598785f7a6bf/crash-20230317-023236-root-ica_aroma-3228888e-792d-467b-a0d5-8a9cfae30a97.txt Working Directory: /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_04_wf/ica_aroma_wf/ica_aroma Inputs: TR: 1.0 args: -np compress_report: auto denoise_type: nonaggr dim: environ: {} feat_dir: fnirt_warp_file: in_file: mask: mat_file: melodic_dir: motion_parameters: out_dir: out out_report: ica_aroma_reportlet.svg report_mask: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node result["result"] = node.run(updatehash=updatehash) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 527, in run result = self._run_interface(execute=True) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 645, in _run_interface return self._run_command(execute) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 771, in _run_command raise NodeExecutionError(msg) nipype.pipeline.engine.nodes.NodeExecutionError: Exception raised while executing Node ica_aroma. Cmdline: ICA_AROMA.py -tr 1.000 -np -den nonaggr -i /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_04_wf/ica_aroma_wf/smooth/vol0000_xform-00000_clipped_merged_cut_smooth.nii.gz -m /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_04_wf/bold_std_trans_wf/_std_target_MNI152NLin6Asym.res2/mask_std_tfm/vol0000_unwarped_merged_valid_average_corrected_brain_mask_maths_trans.nii.gz -meldir /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_04_wf/ica_aroma_wf/melodic -mc /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_04_wf/bold_hmc_wf/normalize_motion/motion_params.txt -o /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_04_wf/ica_aroma_wf/ica_aroma/out Stdout: ------------------------------- RUNNING ICA-AROMA ------------------------------- --------------- 'ICA-based Automatic Removal Of Motion Artifacts' --------------- Warning! Please check whether the determined TR (of 1.0s) is correct! Step 1) MELODIC - The existing/specified MELODIC directory will be used. Stderr: Traceback (most recent call last): File "/opt/ICA-AROMA/ICA_AROMA.py", line 204, in aromafunc.runICA(fslDir, inFile, outDir, melDir, mask, dim, TR) File "/opt/ICA-AROMA/ICA_AROMA_functions.py", line 55, in runICA os.symlink(melDirIn, melDir) OSError: [Errno 95] Operation not supported: '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_04_wf/ica_aroma_wf/melodic' -> '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_04_wf/ica_aroma_wf/ica_aroma/out/melodic.ica' Traceback: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 454, in aggregate_outputs setattr(outputs, key, val) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/traits_extension.py", line 330, in validate value = super(File, self).validate(objekt, name, value, return_pathlike=True) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/traits_extension.py", line 135, in validate self.error(objekt, name, str(value)) File "/opt/conda/lib/python3.9/site-packages/traits/base_trait_handler.py", line 74, in error raise TraitError( traits.trait_errors.TraitError: The 'nonaggr_denoised_file' trait of a _ICA_AROMAOutputSpecRPT instance must be a pathlike object or string representing an existing file, but a value of '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_04_wf/ica_aroma_wf/ica_aroma/out/denoised_func_data_nonaggr.nii.gz' was specified. During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 399, in run runtime = self._post_run_hook(runtime) File "/opt/conda/lib/python3.9/site-packages/niworkflows/interfaces/reportlets/segmentation.py", line 231, in _post_run_hook outputs = self.aggregate_outputs(runtime=runtime) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 461, in aggregate_outputs raise FileNotFoundError(msg) FileNotFoundError: No such file or directory '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_04_wf/ica_aroma_wf/ica_aroma/out/denoised_func_data_nonaggr.nii.gz' for output 'nonaggr_denoised_file' of a ICA_AROMARPT interface Node Name: fmriprep_23_0_wf.single_subject_wlsubj023_wf.func_preproc_ses_nyu3t01_task_prf_acq_PA_run_05_wf.ica_aroma_wf.ica_aroma File: /out/sub-wlsubj023/log/20230317-000730_33642929-b1d6-44f0-bf97-598785f7a6bf/crash-20230317-024103-root-ica_aroma-b83f2782-1784-4566-bd96-ba388cdab658.txt Working Directory: /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_05_wf/ica_aroma_wf/ica_aroma Inputs: TR: 1.0 args: -np compress_report: auto denoise_type: nonaggr dim: environ: {} feat_dir: fnirt_warp_file: in_file: mask: mat_file: melodic_dir: motion_parameters: out_dir: out out_report: ica_aroma_reportlet.svg report_mask: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node result["result"] = node.run(updatehash=updatehash) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 527, in run result = self._run_interface(execute=True) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 645, in _run_interface return self._run_command(execute) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 771, in _run_command raise NodeExecutionError(msg) nipype.pipeline.engine.nodes.NodeExecutionError: Exception raised while executing Node ica_aroma. Cmdline: ICA_AROMA.py -tr 1.000 -np -den nonaggr -i /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_05_wf/ica_aroma_wf/smooth/vol0000_xform-00000_clipped_merged_smooth.nii.gz -m /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_05_wf/bold_std_trans_wf/_std_target_MNI152NLin6Asym.res2/mask_std_tfm/vol0000_unwarped_merged_valid_average_corrected_brain_mask_maths_trans.nii.gz -meldir /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_05_wf/ica_aroma_wf/melodic -mc /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_05_wf/bold_hmc_wf/normalize_motion/motion_params.txt -o /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_05_wf/ica_aroma_wf/ica_aroma/out Stdout: ------------------------------- RUNNING ICA-AROMA ------------------------------- --------------- 'ICA-based Automatic Removal Of Motion Artifacts' --------------- Warning! Please check whether the determined TR (of 1.0s) is correct! Step 1) MELODIC - The existing/specified MELODIC directory will be used. Stderr: Traceback (most recent call last): File "/opt/ICA-AROMA/ICA_AROMA.py", line 204, in aromafunc.runICA(fslDir, inFile, outDir, melDir, mask, dim, TR) File "/opt/ICA-AROMA/ICA_AROMA_functions.py", line 55, in runICA os.symlink(melDirIn, melDir) OSError: [Errno 95] Operation not supported: '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_05_wf/ica_aroma_wf/melodic' -> '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_05_wf/ica_aroma_wf/ica_aroma/out/melodic.ica' Traceback: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 454, in aggregate_outputs setattr(outputs, key, val) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/traits_extension.py", line 330, in validate value = super(File, self).validate(objekt, name, value, return_pathlike=True) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/traits_extension.py", line 135, in validate self.error(objekt, name, str(value)) File "/opt/conda/lib/python3.9/site-packages/traits/base_trait_handler.py", line 74, in error raise TraitError( traits.trait_errors.TraitError: The 'nonaggr_denoised_file' trait of a _ICA_AROMAOutputSpecRPT instance must be a pathlike object or string representing an existing file, but a value of '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_05_wf/ica_aroma_wf/ica_aroma/out/denoised_func_data_nonaggr.nii.gz' was specified. During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 399, in run runtime = self._post_run_hook(runtime) File "/opt/conda/lib/python3.9/site-packages/niworkflows/interfaces/reportlets/segmentation.py", line 231, in _post_run_hook outputs = self.aggregate_outputs(runtime=runtime) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 461, in aggregate_outputs raise FileNotFoundError(msg) FileNotFoundError: No such file or directory '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_05_wf/ica_aroma_wf/ica_aroma/out/denoised_func_data_nonaggr.nii.gz' for output 'nonaggr_denoised_file' of a ICA_AROMARPT interface Node Name: fmriprep_23_0_wf.single_subject_wlsubj023_wf.func_preproc_ses_nyu3t01_task_prf_acq_PA_run_06_wf.ica_aroma_wf.ica_aroma File: /out/sub-wlsubj023/log/20230317-000730_33642929-b1d6-44f0-bf97-598785f7a6bf/crash-20230317-024335-root-ica_aroma-7e030a9b-55dd-4d12-bc68-b2dfe7667602.txt Working Directory: /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_06_wf/ica_aroma_wf/ica_aroma Inputs: TR: 1.0 args: -np compress_report: auto denoise_type: nonaggr dim: environ: {} feat_dir: fnirt_warp_file: in_file: mask: mat_file: melodic_dir: motion_parameters: out_dir: out out_report: ica_aroma_reportlet.svg report_mask: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node result["result"] = node.run(updatehash=updatehash) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 527, in run result = self._run_interface(execute=True) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 645, in _run_interface return self._run_command(execute) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 771, in _run_command raise NodeExecutionError(msg) nipype.pipeline.engine.nodes.NodeExecutionError: Exception raised while executing Node ica_aroma. Cmdline: ICA_AROMA.py -tr 1.000 -np -den nonaggr -i /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_06_wf/ica_aroma_wf/smooth/vol0000_xform-00000_clipped_merged_smooth.nii.gz -m /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_06_wf/bold_std_trans_wf/_std_target_MNI152NLin6Asym.res2/mask_std_tfm/vol0000_unwarped_merged_valid_average_corrected_brain_mask_maths_trans.nii.gz -meldir /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_06_wf/ica_aroma_wf/melodic -mc /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_06_wf/bold_hmc_wf/normalize_motion/motion_params.txt -o /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_06_wf/ica_aroma_wf/ica_aroma/out Stdout: ------------------------------- RUNNING ICA-AROMA ------------------------------- --------------- 'ICA-based Automatic Removal Of Motion Artifacts' --------------- Warning! Please check whether the determined TR (of 1.0s) is correct! Step 1) MELODIC - The existing/specified MELODIC directory will be used. Stderr: Traceback (most recent call last): File "/opt/ICA-AROMA/ICA_AROMA.py", line 204, in aromafunc.runICA(fslDir, inFile, outDir, melDir, mask, dim, TR) File "/opt/ICA-AROMA/ICA_AROMA_functions.py", line 55, in runICA os.symlink(melDirIn, melDir) OSError: [Errno 95] Operation not supported: '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_06_wf/ica_aroma_wf/melodic' -> '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_06_wf/ica_aroma_wf/ica_aroma/out/melodic.ica' Traceback: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 454, in aggregate_outputs setattr(outputs, key, val) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/traits_extension.py", line 330, in validate value = super(File, self).validate(objekt, name, value, return_pathlike=True) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/traits_extension.py", line 135, in validate self.error(objekt, name, str(value)) File "/opt/conda/lib/python3.9/site-packages/traits/base_trait_handler.py", line 74, in error raise TraitError( traits.trait_errors.TraitError: The 'nonaggr_denoised_file' trait of a _ICA_AROMAOutputSpecRPT instance must be a pathlike object or string representing an existing file, but a value of '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_06_wf/ica_aroma_wf/ica_aroma/out/denoised_func_data_nonaggr.nii.gz' was specified. During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 399, in run runtime = self._post_run_hook(runtime) File "/opt/conda/lib/python3.9/site-packages/niworkflows/interfaces/reportlets/segmentation.py", line 231, in _post_run_hook outputs = self.aggregate_outputs(runtime=runtime) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 461, in aggregate_outputs raise FileNotFoundError(msg) FileNotFoundError: No such file or directory '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_06_wf/ica_aroma_wf/ica_aroma/out/denoised_func_data_nonaggr.nii.gz' for output 'nonaggr_denoised_file' of a ICA_AROMARPT interface Node Name: fmriprep_23_0_wf.single_subject_wlsubj023_wf.func_preproc_ses_nyu3t01_task_prf_acq_PA_run_07_wf.ica_aroma_wf.ica_aroma File: /out/sub-wlsubj023/log/20230317-000730_33642929-b1d6-44f0-bf97-598785f7a6bf/crash-20230317-024514-root-ica_aroma-09df686a-2395-44f7-87f8-14d5089c47cc.txt Working Directory: /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_07_wf/ica_aroma_wf/ica_aroma Inputs: TR: 1.0 args: -np compress_report: auto denoise_type: nonaggr dim: environ: {} feat_dir: fnirt_warp_file: in_file: mask: mat_file: melodic_dir: motion_parameters: out_dir: out out_report: ica_aroma_reportlet.svg report_mask: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node result["result"] = node.run(updatehash=updatehash) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 527, in run result = self._run_interface(execute=True) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 645, in _run_interface return self._run_command(execute) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 771, in _run_command raise NodeExecutionError(msg) nipype.pipeline.engine.nodes.NodeExecutionError: Exception raised while executing Node ica_aroma. Cmdline: ICA_AROMA.py -tr 1.000 -np -den nonaggr -i /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_07_wf/ica_aroma_wf/smooth/vol0000_xform-00000_clipped_merged_smooth.nii.gz -m /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_07_wf/bold_std_trans_wf/_std_target_MNI152NLin6Asym.res2/mask_std_tfm/vol0000_unwarped_merged_valid_average_corrected_brain_mask_maths_trans.nii.gz -meldir /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_07_wf/ica_aroma_wf/melodic -mc /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_07_wf/bold_hmc_wf/normalize_motion/motion_params.txt -o /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_07_wf/ica_aroma_wf/ica_aroma/out Stdout: ------------------------------- RUNNING ICA-AROMA ------------------------------- --------------- 'ICA-based Automatic Removal Of Motion Artifacts' --------------- Warning! Please check whether the determined TR (of 1.0s) is correct! Step 1) MELODIC - The existing/specified MELODIC directory will be used. Stderr: Traceback (most recent call last): File "/opt/ICA-AROMA/ICA_AROMA.py", line 204, in aromafunc.runICA(fslDir, inFile, outDir, melDir, mask, dim, TR) File "/opt/ICA-AROMA/ICA_AROMA_functions.py", line 55, in runICA os.symlink(melDirIn, melDir) OSError: [Errno 95] Operation not supported: '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_07_wf/ica_aroma_wf/melodic' -> '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_07_wf/ica_aroma_wf/ica_aroma/out/melodic.ica' Traceback: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 454, in aggregate_outputs setattr(outputs, key, val) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/traits_extension.py", line 330, in validate value = super(File, self).validate(objekt, name, value, return_pathlike=True) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/traits_extension.py", line 135, in validate self.error(objekt, name, str(value)) File "/opt/conda/lib/python3.9/site-packages/traits/base_trait_handler.py", line 74, in error raise TraitError( traits.trait_errors.TraitError: The 'nonaggr_denoised_file' trait of a _ICA_AROMAOutputSpecRPT instance must be a pathlike object or string representing an existing file, but a value of '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_07_wf/ica_aroma_wf/ica_aroma/out/denoised_func_data_nonaggr.nii.gz' was specified. During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 399, in run runtime = self._post_run_hook(runtime) File "/opt/conda/lib/python3.9/site-packages/niworkflows/interfaces/reportlets/segmentation.py", line 231, in _post_run_hook outputs = self.aggregate_outputs(runtime=runtime) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 461, in aggregate_outputs raise FileNotFoundError(msg) FileNotFoundError: No such file or directory '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_07_wf/ica_aroma_wf/ica_aroma/out/denoised_func_data_nonaggr.nii.gz' for output 'nonaggr_denoised_file' of a ICA_AROMARPT interface Node Name: fmriprep_23_0_wf.single_subject_wlsubj023_wf.func_preproc_ses_nyu3t01_task_prf_acq_PA_run_08_wf.ica_aroma_wf.ica_aroma File: /out/sub-wlsubj023/log/20230317-000730_33642929-b1d6-44f0-bf97-598785f7a6bf/crash-20230317-024742-root-ica_aroma-9bccfe2a-8710-4f78-a70c-ce262e8a679e.txt Working Directory: /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_08_wf/ica_aroma_wf/ica_aroma Inputs: TR: 1.0 args: -np compress_report: auto denoise_type: nonaggr dim: environ: {} feat_dir: fnirt_warp_file: in_file: mask: mat_file: melodic_dir: motion_parameters: out_dir: out out_report: ica_aroma_reportlet.svg report_mask: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node result["result"] = node.run(updatehash=updatehash) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 527, in run result = self._run_interface(execute=True) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 645, in _run_interface return self._run_command(execute) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 771, in _run_command raise NodeExecutionError(msg) nipype.pipeline.engine.nodes.NodeExecutionError: Exception raised while executing Node ica_aroma. Cmdline: ICA_AROMA.py -tr 1.000 -np -den nonaggr -i /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_08_wf/ica_aroma_wf/smooth/vol0000_xform-00000_clipped_merged_smooth.nii.gz -m /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_08_wf/bold_std_trans_wf/_std_target_MNI152NLin6Asym.res2/mask_std_tfm/vol0000_unwarped_merged_valid_average_corrected_brain_mask_maths_trans.nii.gz -meldir /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_08_wf/ica_aroma_wf/melodic -mc /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_08_wf/bold_hmc_wf/normalize_motion/motion_params.txt -o /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_08_wf/ica_aroma_wf/ica_aroma/out Stdout: ------------------------------- RUNNING ICA-AROMA ------------------------------- --------------- 'ICA-based Automatic Removal Of Motion Artifacts' --------------- Warning! Please check whether the determined TR (of 1.0s) is correct! Step 1) MELODIC - The existing/specified MELODIC directory will be used. Stderr: Traceback (most recent call last): File "/opt/ICA-AROMA/ICA_AROMA.py", line 204, in aromafunc.runICA(fslDir, inFile, outDir, melDir, mask, dim, TR) File "/opt/ICA-AROMA/ICA_AROMA_functions.py", line 55, in runICA os.symlink(melDirIn, melDir) OSError: [Errno 95] Operation not supported: '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_08_wf/ica_aroma_wf/melodic' -> '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_08_wf/ica_aroma_wf/ica_aroma/out/melodic.ica' Traceback: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 454, in aggregate_outputs setattr(outputs, key, val) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/traits_extension.py", line 330, in validate value = super(File, self).validate(objekt, name, value, return_pathlike=True) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/traits_extension.py", line 135, in validate self.error(objekt, name, str(value)) File "/opt/conda/lib/python3.9/site-packages/traits/base_trait_handler.py", line 74, in error raise TraitError( traits.trait_errors.TraitError: The 'nonaggr_denoised_file' trait of a _ICA_AROMAOutputSpecRPT instance must be a pathlike object or string representing an existing file, but a value of '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_08_wf/ica_aroma_wf/ica_aroma/out/denoised_func_data_nonaggr.nii.gz' was specified. During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 399, in run runtime = self._post_run_hook(runtime) File "/opt/conda/lib/python3.9/site-packages/niworkflows/interfaces/reportlets/segmentation.py", line 231, in _post_run_hook outputs = self.aggregate_outputs(runtime=runtime) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 461, in aggregate_outputs raise FileNotFoundError(msg) FileNotFoundError: No such file or directory '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_08_wf/ica_aroma_wf/ica_aroma/out/denoised_func_data_nonaggr.nii.gz' for output 'nonaggr_denoised_file' of a ICA_AROMARPT interface Node Name: fmriprep_23_0_wf.single_subject_wlsubj023_wf.func_preproc_ses_nyu3t01_task_prf_acq_PA_run_09_wf.ica_aroma_wf.ica_aroma File: /out/sub-wlsubj023/log/20230317-000730_33642929-b1d6-44f0-bf97-598785f7a6bf/crash-20230317-024824-root-ica_aroma-99a531d9-8424-4d25-9d4b-719ee82248f8.txt Working Directory: /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_09_wf/ica_aroma_wf/ica_aroma Inputs: TR: 1.0 args: -np compress_report: auto denoise_type: nonaggr dim: environ: {} feat_dir: fnirt_warp_file: in_file: mask: mat_file: melodic_dir: motion_parameters: out_dir: out out_report: ica_aroma_reportlet.svg report_mask: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node result["result"] = node.run(updatehash=updatehash) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 527, in run result = self._run_interface(execute=True) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 645, in _run_interface return self._run_command(execute) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 771, in _run_command raise NodeExecutionError(msg) nipype.pipeline.engine.nodes.NodeExecutionError: Exception raised while executing Node ica_aroma. Cmdline: ICA_AROMA.py -tr 1.000 -np -den nonaggr -i /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_09_wf/ica_aroma_wf/smooth/vol0000_xform-00000_clipped_merged_smooth.nii.gz -m /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_09_wf/bold_std_trans_wf/_std_target_MNI152NLin6Asym.res2/mask_std_tfm/vol0000_unwarped_merged_valid_average_corrected_brain_mask_maths_trans.nii.gz -meldir /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_09_wf/ica_aroma_wf/melodic -mc /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_09_wf/bold_hmc_wf/normalize_motion/motion_params.txt -o /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_09_wf/ica_aroma_wf/ica_aroma/out Stdout: ------------------------------- RUNNING ICA-AROMA ------------------------------- --------------- 'ICA-based Automatic Removal Of Motion Artifacts' --------------- Warning! Please check whether the determined TR (of 1.0s) is correct! Step 1) MELODIC - The existing/specified MELODIC directory will be used. Stderr: Traceback (most recent call last): File "/opt/ICA-AROMA/ICA_AROMA.py", line 204, in aromafunc.runICA(fslDir, inFile, outDir, melDir, mask, dim, TR) File "/opt/ICA-AROMA/ICA_AROMA_functions.py", line 55, in runICA os.symlink(melDirIn, melDir) OSError: [Errno 95] Operation not supported: '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_09_wf/ica_aroma_wf/melodic' -> '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_09_wf/ica_aroma_wf/ica_aroma/out/melodic.ica' Traceback: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 454, in aggregate_outputs setattr(outputs, key, val) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/traits_extension.py", line 330, in validate value = super(File, self).validate(objekt, name, value, return_pathlike=True) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/traits_extension.py", line 135, in validate self.error(objekt, name, str(value)) File "/opt/conda/lib/python3.9/site-packages/traits/base_trait_handler.py", line 74, in error raise TraitError( traits.trait_errors.TraitError: The 'nonaggr_denoised_file' trait of a _ICA_AROMAOutputSpecRPT instance must be a pathlike object or string representing an existing file, but a value of '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_09_wf/ica_aroma_wf/ica_aroma/out/denoised_func_data_nonaggr.nii.gz' was specified. During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 399, in run runtime = self._post_run_hook(runtime) File "/opt/conda/lib/python3.9/site-packages/niworkflows/interfaces/reportlets/segmentation.py", line 231, in _post_run_hook outputs = self.aggregate_outputs(runtime=runtime) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 461, in aggregate_outputs raise FileNotFoundError(msg) FileNotFoundError: No such file or directory '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_09_wf/ica_aroma_wf/ica_aroma/out/denoised_func_data_nonaggr.nii.gz' for output 'nonaggr_denoised_file' of a ICA_AROMARPT interface Node Name: fmriprep_23_0_wf.single_subject_wlsubj023_wf.func_preproc_ses_nyu3t01_task_prf_acq_PA_run_10_wf.ica_aroma_wf.ica_aroma File: /out/sub-wlsubj023/log/20230317-000730_33642929-b1d6-44f0-bf97-598785f7a6bf/crash-20230317-025010-root-ica_aroma-d9085978-b821-4dd4-8a62-8a27d1699f5e.txt Working Directory: /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_10_wf/ica_aroma_wf/ica_aroma Inputs: TR: 1.0 args: -np compress_report: auto denoise_type: nonaggr dim: environ: {} feat_dir: fnirt_warp_file: in_file: mask: mat_file: melodic_dir: motion_parameters: out_dir: out out_report: ica_aroma_reportlet.svg report_mask: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node result["result"] = node.run(updatehash=updatehash) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 527, in run result = self._run_interface(execute=True) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 645, in _run_interface return self._run_command(execute) File "/opt/conda/lib/python3.9/site-packages/nipype/pipeline/engine/nodes.py", line 771, in _run_command raise NodeExecutionError(msg) nipype.pipeline.engine.nodes.NodeExecutionError: Exception raised while executing Node ica_aroma. Cmdline: ICA_AROMA.py -tr 1.000 -np -den nonaggr -i /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_10_wf/ica_aroma_wf/smooth/vol0000_xform-00000_clipped_merged_smooth.nii.gz -m /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_10_wf/bold_std_trans_wf/_std_target_MNI152NLin6Asym.res2/mask_std_tfm/vol0000_unwarped_merged_valid_average_corrected_brain_mask_maths_trans.nii.gz -meldir /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_10_wf/ica_aroma_wf/melodic -mc /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_10_wf/bold_hmc_wf/normalize_motion/motion_params.txt -o /work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_10_wf/ica_aroma_wf/ica_aroma/out Stdout: ------------------------------- RUNNING ICA-AROMA ------------------------------- --------------- 'ICA-based Automatic Removal Of Motion Artifacts' --------------- Warning! Please check whether the determined TR (of 1.0s) is correct! Step 1) MELODIC - The existing/specified MELODIC directory will be used. Stderr: Traceback (most recent call last): File "/opt/ICA-AROMA/ICA_AROMA.py", line 204, in aromafunc.runICA(fslDir, inFile, outDir, melDir, mask, dim, TR) File "/opt/ICA-AROMA/ICA_AROMA_functions.py", line 55, in runICA os.symlink(melDirIn, melDir) OSError: [Errno 95] Operation not supported: '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_10_wf/ica_aroma_wf/melodic' -> '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_10_wf/ica_aroma_wf/ica_aroma/out/melodic.ica' Traceback: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 454, in aggregate_outputs setattr(outputs, key, val) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/traits_extension.py", line 330, in validate value = super(File, self).validate(objekt, name, value, return_pathlike=True) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/traits_extension.py", line 135, in validate self.error(objekt, name, str(value)) File "/opt/conda/lib/python3.9/site-packages/traits/base_trait_handler.py", line 74, in error raise TraitError( traits.trait_errors.TraitError: The 'nonaggr_denoised_file' trait of a _ICA_AROMAOutputSpecRPT instance must be a pathlike object or string representing an existing file, but a value of '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_10_wf/ica_aroma_wf/ica_aroma/out/denoised_func_data_nonaggr.nii.gz' was specified. During handling of the above exception, another exception occurred: Traceback (most recent call last): File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 399, in run runtime = self._post_run_hook(runtime) File "/opt/conda/lib/python3.9/site-packages/niworkflows/interfaces/reportlets/segmentation.py", line 231, in _post_run_hook outputs = self.aggregate_outputs(runtime=runtime) File "/opt/conda/lib/python3.9/site-packages/nipype/interfaces/base/core.py", line 461, in aggregate_outputs raise FileNotFoundError(msg) FileNotFoundError: No such file or directory '/work/fmriprep_23_0_wf/single_subject_wlsubj023_wf/func_preproc_ses_nyu3t01_task_prf_acq_PA_run_10_wf/ica_aroma_wf/ica_aroma/out/denoised_func_data_nonaggr.nii.gz' for output 'nonaggr_denoised_file' of a ICA_AROMARPT interface