fmriprep-docker ${bids_root_dir} ${outdir} participant --participant-label ${subj} \ --nthreads ${nthreads} \ --omp-nthreads 4 \ --mem_mb ${mem_mb} \ --md-only-boilerplate \ --ignore flair \ --skull-strip-t1w skip \ --fs-subjects-dir ${outdir}/freesurfer_filled_SPM \ --topup-max-vols 1 \ --bold2t1w-dof 12 \ --force-bbr \ --error-on-aroma-warnings \ --stop-on-first-crash --use-aroma --verbose \ --fs-no-reconall \ --work-dir /media/riccardo/Data/PROTEQT_PROJECT/fmriprep_final_workdir/fmriprep_wf \ --output-spaces MNI152NLin6Asym:res-04:res-01 T1w func:res-native MNI152NLin2009cAsym