INFO: underlay of /etc/localtime required more than 50 (103) bind mounts 1: [ERR] Files with such naming scheme are not part of BIDS specification. This error is most commonly caused by typos in file names that make them not BIDS compatible. Please consult the specification and make sure your files are named correctly. If this is not a file naming issue (for example when including files not yet covered by the BIDS specification) you should include a ".bidsignore" file in your dataset (see https://github.com/bids-standard/bids-validator#bidsignore for details). Please note that derived (processed) data should be placed in /derivatives folder and source data (such as DICOMS or behavioural logs in proprietary formats) should be placed in the /sourcedata folder. (code: 1 - NOT_INCLUDED) ./scans.json Evidence: scans.json Please visit https://neurostars.org/search?q=NOT_INCLUDED for existing conversations about this issue. Summary: Available Tasks: Available Modalities: 29 Files, 215.84MB rest FLAIR 1 - Subject TODO: full task name for rest T1w 1 - Session T2w dwi bold events fieldmap fieldmap If you have any questions, please post on https://neurostars.org/tags/bids. Making sure the input data is BIDS compliant (warnings can be ignored in most cases). 230102-10:47:08,185 nipype.workflow INFO: Running with omp_nthreads=8, nthreads=16 230102-10:47:08,194 nipype.workflow IMPORTANT: Running qsiprep version 0.16.1: * BIDS dataset path: /data. * Participant list: ['CAM003']. * Run identifier: 20230102-104702_e2fe931d-3d4a-4cbc-993d-a64ad205b746. 230102-10:47:09,734 nipype.workflow INFO: Combining all dwi files within each available session: 230102-10:47:09,734 nipype.workflow INFO: - 1 scans in session 01brain 230102-10:47:09,751 nipype.workflow INFO: [{'dwi_series': ['/data/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_dwi.nii.gz'], 'fieldmap_info': {'suffix': 'epi', 'epi': ['/data/sub-CAM003/ses-01brain/fmap/sub-CAM003_ses-01brain_dir-PA_epi.nii.gz']}, 'dwi_series_pedir': 'j-', 'concatenated_bids_name': 'sub-CAM003_ses-01brain_dir-AP'}] 230102-10:47:09,807 nipype.workflow IMPORTANT: Creating dwi processing workflow "dwi_preproc_ses_01brain_dir_AP_wf" to produce output sub-CAM003_ses-01brain_dir-AP (1.06 GB / 141 DWIs). Memory resampled/largemem=1.25/1.33 GB. 230102-10:47:09,809 nipype.workflow INFO: Automatically using 5, 5, 5 window for dwidenoise 230102-10:47:09,835 nipype.workflow INFO: Using 8 threads in eddy 230102-10:47:13,395 nipype.workflow IMPORTANT: Works derived from this qsiprep execution should include the following boilerplate: Preprocessing was performed using *QSIPrep* 0.16.1, which is based on *Nipype* 1.8.5 (@nipype1; @nipype2; RRID:SCR_002502). Anatomical data preprocessing : The T1-weighted (T1w) image was corrected for intensity non-uniformity (INU) using `N4BiasFieldCorrection` [@n4, ANTs 2.4.0], and used as T1w-reference throughout the workflow. The T1w-reference was then skull-stripped using `antsBrainExtraction.sh` (ANTs 2.4.0), using OASIS as target template. Spatial normalization to the ICBM 152 Nonlinear Asymmetrical template version 2009c [@mni, RRID:SCR_008796] was performed through nonlinear registration with `antsRegistration` [ANTs 2.4.0, RRID:SCR_004757, @ants], using brain-extracted versions of both T1w volume and template. Brain tissue segmentation of cerebrospinal fluid (CSF), white-matter (WM) and gray-matter (GM) was performed on the brain-extracted T1w using `FAST` [FSL 6.0.5.1:57b01774, RRID:SCR_002823, @fsl_fast]. Diffusion data preprocessing : Any images with a b-value less than 100 s/mm^2 were treated as a *b*=0 image. MP-PCA denoising as implemented in MRtrix3's `dwidenoise`[@dwidenoise1] was applied with a 5-voxel window. After MP-PCA, B1 field inhomogeneity was corrected using `dwibiascorrect` from MRtrix3 with the N4 algorithm [@n4]. After B1 bias correction, the mean intensity of the DWI series was adjusted so all the mean intensity of the b=0 images matched across eachseparate DWI scanning sequence. FSL (version 6.0.5.1:57b01774)'s eddy was used for head motion correction and Eddy current correction [@anderssoneddy]. Eddy was configured with a $q$-space smoothing factor of 10, a total of 5 iterations, and 1000 voxels used to estimate hyperparameters. A linear first level model and a linear second level model were used to characterize Eddy current-related spatial distortion. $q$-space coordinates were forcefully assigned to shells. Field offset was attempted to be separated from subject movement. Shells were aligned post-eddy. Eddy's outlier replacement was run [@eddyrepol]. Data were grouped by slice, only including values from slices determined to contain at least 250 intracerebral voxels. Groups deviating by more than 4 standard deviations from the prediction had their data replaced with imputed values. Data was collected with reversed phase-encode blips, resulting in pairs of images with distortions going in opposite directions. Here, b=0 reference images with reversed phase encoding directions were used along with an equal number of b=0 images extracted from the DWI scans. From these pairs the susceptibility-induced off-resonance field was estimated using a method similar to that described in [@topup]. The fieldmaps were ultimately incorporated into the Eddy current and head motion correction interpolation. Final interpolation was performed using the `jac` method. Several confounding time-series were calculated based on the preprocessed DWI: framewise displacement (FD) using the implementation in *Nipype* [following the definitions by @power_fd_dvars]. The head-motion estimates calculated in the correction step were also placed within the corresponding confounds file. Slicewise cross correlation was also calculated. The DWI time-series were resampled to ACPC, generating a *preprocessed DWI run in ACPC space* with 1.3mm isotropic voxels. Many internal operations of *QSIPrep* use *Nilearn* 0.9.2 [@nilearn, RRID:SCR_001362] and *Dipy* [@dipy]. For more details of the pipeline, see [the section corresponding to workflows in *QSIPrep*'s documentation](https://qsiprep.readthedocs.io/en/latest/workflows.html "QSIPrep's documentation"). ### References [WARNING] This document format requires a nonempty element. Please specify either 'title' or 'pagetitle' in the metadata. Falling back to 'CITATION' 230102-10:47:20,16 nipype.workflow INFO: Workflow qsiprep_wf settings: ['check', 'execution', 'logging', 'monitoring'] 230102-10:47:20,498 nipype.workflow INFO: Running in parallel. 230102-10:47:20,506 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 6 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:47:20,656 nipype.workflow INFO: [Job 0] Cached (qsiprep_wf.single_subject_CAM003_wf.bidssrc). 230102-10:47:20,664 nipype.workflow INFO: [Node] Outdated cache found for "qsiprep_wf.single_subject_CAM003_wf.about". 230102-10:47:20,664 nipype.workflow VERBOSE: [Node] Old/new hashes = 22a19a93791fa2ee50949a7bf472f68b/b9e6a5dd8d7bc40412bb43bb03f8a84c 230102-10:47:20,666 nipype.workflow VERBOSE: Some dictionary entries had differing values: * command: '/usr/local...freesurfer' != '/usr/local...s 16 -v -v' 230102-10:47:20,666 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.about" in "/work/qsiprep_wf/single_subject_CAM003_wf/about". 230102-10:47:20,667 nipype.workflow INFO: [Node] Outdated cache found for "qsiprep_wf.single_subject_CAM003_wf.about". 230102-10:47:20,667 nipype.workflow VERBOSE: [Node] Old/new hashes = 22a19a93791fa2ee50949a7bf472f68b/b9e6a5dd8d7bc40412bb43bb03f8a84c 230102-10:47:20,668 nipype.workflow VERBOSE: Some dictionary entries had differing values: * command: '/usr/local...freesurfer' != '/usr/local...s 16 -v -v' 230102-10:47:20,754 nipype.workflow INFO: [Node] Executing "about" <qsiprep.interfaces.reports.AboutSummary> 230102-10:47:20,782 nipype.workflow INFO: [Node] Finished "about", elapsed time 0.003943s. 230102-10:47:20,804 nipype.workflow INFO: [Job 1] Completed (qsiprep_wf.single_subject_CAM003_wf.about). 230102-10:47:20,968 nipype.workflow INFO: [Job 2] Cached (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.output_grid_wf.autobox_template). 230102-10:47:20,975 nipype.workflow INFO: [Job 3] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.conform_dwis01). 230102-10:47:20,981 nipype.workflow INFO: [Job 4] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.noise_images). 230102-10:47:20,988 nipype.workflow INFO: [Job 5] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.bias_images). 230102-10:47:22,507 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 9 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:47:22,680 nipype.workflow INFO: [Job 6] Cached (qsiprep_wf.single_subject_CAM003_wf.bids_info). 230102-10:47:22,691 nipype.workflow INFO: [Job 7] Cached (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_template_wf.t1_template_dimensions). 230102-10:47:22,705 nipype.workflow INFO: [Node] Outdated cache found for "qsiprep_wf.single_subject_CAM003_wf.ds_report_about". 230102-10:47:22,705 nipype.workflow VERBOSE: [Node] Old/new hashes = ae8de5b349ba7481638daaa378ba5718/137d02a3c7f8ebefc65f437c2fad90ae 230102-10:47:22,707 nipype.workflow VERBOSE: Some dictionary entries had differing values: * in_file: (('/work/qsiprep_wf/single_subject_CAM003_wf/about/report.html', '8106faf2bb3937e5db7472fb4ce0b68f'),) != (('/work/qsiprep_wf/single_subject_CAM003_wf/about/report.html', '67095ed00f3c95e673e5b56ceb66e914'),) 230102-10:47:22,707 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.ds_report_about" in "/work/qsiprep_wf/single_subject_CAM003_wf/ds_report_about". 230102-10:47:22,708 nipype.workflow INFO: [Node] Outdated cache found for "qsiprep_wf.single_subject_CAM003_wf.ds_report_about". 230102-10:47:22,708 nipype.workflow VERBOSE: [Node] Old/new hashes = ae8de5b349ba7481638daaa378ba5718/137d02a3c7f8ebefc65f437c2fad90ae 230102-10:47:22,709 nipype.workflow VERBOSE: Some dictionary entries had differing values: * in_file: (('/work/qsiprep_wf/single_subject_CAM003_wf/about/report.html', '8106faf2bb3937e5db7472fb4ce0b68f'),) != (('/work/qsiprep_wf/single_subject_CAM003_wf/about/report.html', '67095ed00f3c95e673e5b56ceb66e914'),) 230102-10:47:22,769 nipype.workflow INFO: [Node] Executing "ds_report_about" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:47:22,780 nipype.workflow INFO: [Node] Finished "ds_report_about", elapsed time 0.010167s. 230102-10:47:22,802 nipype.workflow INFO: [Job 8] Completed (qsiprep_wf.single_subject_CAM003_wf.ds_report_about). 230102-10:47:22,968 nipype.workflow INFO: [Job 9] Cached (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.output_grid_wf.deoblique_autobox). 230102-10:47:22,979 nipype.workflow INFO: [Job 10] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.conformed_raw_images). 230102-10:47:22,986 nipype.workflow INFO: [Job 11] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.conformation_reports). 230102-10:47:22,994 nipype.workflow INFO: [Job 12] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_ses_01brain_dir_AP_dwi_wf.denoiser). 230102-10:47:23,1 nipype.workflow INFO: [Job 13] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.conformed_bvals). 230102-10:47:23,9 nipype.workflow INFO: [Job 14] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.conformed_bvecs). 230102-10:47:24,509 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 10 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:47:24,684 nipype.workflow INFO: [Job 15] Cached (qsiprep_wf.single_subject_CAM003_wf.summary). 230102-10:47:24,695 nipype.workflow INFO: [Job 16] Cached (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_template_wf.t1_conform). 230102-10:47:24,703 nipype.workflow INFO: [Job 17] Cached (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_derivatives_wf.t1_name). 230102-10:47:24,760 nipype.workflow INFO: [Node] Setting-up "_ds_t1_template_transforms0" in "/work/qsiprep_wf/single_subject_CAM003_wf/anat_preproc_wf/anat_derivatives_wf/ds_t1_template_transforms/mapflow/_ds_t1_template_transforms0". 230102-10:47:24,829 nipype.workflow INFO: [Node] Executing "_ds_t1_template_transforms0" <qsiprep.workflows.anatomical.DerivativesDataSink> 230102-10:47:24,867 nipype.workflow INFO: [Node] Finished "_ds_t1_template_transforms0", elapsed time 0.03736s. 230102-10:47:24,907 nipype.workflow INFO: [Job 18] Completed (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_template_transforms). 230102-10:47:25,55 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_reports_wf.ds_t1_conform_report" in "/work/qsiprep_wf/single_subject_CAM003_wf/anat_preproc_wf/anat_reports_wf/ds_t1_conform_report". 230102-10:47:25,115 nipype.workflow INFO: [Node] Executing "ds_t1_conform_report" <qsiprep.workflows.anatomical.DerivativesDataSink> 230102-10:47:25,118 nipype.workflow INFO: [Node] Finished "ds_t1_conform_report", elapsed time 0.002101s. 230102-10:47:25,141 nipype.workflow INFO: [Job 19] Completed (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_reports_wf.ds_t1_conform_report). 230102-10:47:25,289 nipype.workflow INFO: [Job 20] Cached (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.output_grid_wf.resample_to_voxel_size). 230102-10:47:25,300 nipype.workflow INFO: [Job 21] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.raw_merge). 230102-10:47:25,316 nipype.workflow INFO: [Job 22] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.summary). 230102-10:47:25,329 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_ses_01brain_dir_AP_dwi_wf.ds_report_dwi_denoise_ses_01brain_dir_AP_dwi_wf_denoising" in "/work/qsiprep_wf/single_subject_CAM003_wf/dwi_preproc_ses_01brain_dir_AP_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_denoise_ses_01brain_dir_AP_dwi_wf/ds_report_dwi_denoise_ses_01brain_dir_AP_dwi_wf_denoising". 230102-10:47:25,401 nipype.workflow INFO: [Node] Executing "ds_report_dwi_denoise_ses_01brain_dir_AP_dwi_wf_denoising" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:47:25,410 nipype.workflow INFO: [Node] Finished "ds_report_dwi_denoise_ses_01brain_dir_AP_dwi_wf_denoising", elapsed time 0.007936s. 230102-10:47:25,433 nipype.workflow INFO: [Job 23] Completed (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_ses_01brain_dir_AP_dwi_wf.ds_report_dwi_denoise_ses_01brain_dir_AP_dwi_wf_denoising). 230102-10:47:25,580 nipype.workflow INFO: [Job 24] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_ses_01brain_dir_AP_dwi_wf.get_b0s). 230102-10:47:26,510 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 5 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:47:26,666 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.ds_report_summary" in "/work/qsiprep_wf/single_subject_CAM003_wf/ds_report_summary". 230102-10:47:26,728 nipype.workflow INFO: [Node] Executing "ds_report_summary" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:47:26,731 nipype.workflow INFO: [Node] Finished "ds_report_summary", elapsed time 0.00228s. 230102-10:47:26,753 nipype.workflow INFO: [Job 25] Completed (qsiprep_wf.single_subject_CAM003_wf.ds_report_summary). 230102-10:47:26,910 nipype.workflow INFO: [Job 26] Cached (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.skullstrip_wf.t1_skull_strip). 230102-10:47:26,920 nipype.workflow INFO: [Job 27] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.test_pre_hmc_connect). 230102-10:47:26,931 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.ds_report_summary" in "/work/qsiprep_wf/single_subject_CAM003_wf/dwi_preproc_ses_01brain_dir_AP_wf/ds_report_summary". 230102-10:47:26,992 nipype.workflow INFO: [Node] Executing "ds_report_summary" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:47:26,995 nipype.workflow INFO: [Node] Finished "ds_report_summary", elapsed time 0.002342s. 230102-10:47:27,16 nipype.workflow INFO: [Job 28] Completed (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.ds_report_summary). 230102-10:47:27,163 nipype.workflow INFO: [Job 29] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_ses_01brain_dir_AP_dwi_wf.quick_mask). 230102-10:47:28,512 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 2 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:47:28,668 nipype.workflow INFO: [Job 30] Cached (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.skullstrip_wf.rigid_acpc_align). 230102-10:47:28,687 nipype.workflow INFO: [Job 31] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_ses_01brain_dir_AP_dwi_wf.biascorr). 230102-10:47:30,513 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 7 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:47:30,673 nipype.workflow INFO: [Job 32] Cached (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.skullstrip_wf.rigid_acpc_resample_brain). 230102-10:47:30,683 nipype.workflow INFO: [Job 33] Cached (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.skullstrip_wf.rigid_acpc_resample_head). 230102-10:47:30,693 nipype.workflow INFO: [Job 34] Cached (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.skullstrip_wf.rigid_acpc_resample_mask). 230102-10:47:30,703 nipype.workflow INFO: [Job 35] Cached (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.skullstrip_wf.rigid_acpc_resample_seg). 230102-10:47:30,713 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_ses_01brain_dir_AP_dwi_wf.ds_report_dwi_denoise_ses_01brain_dir_AP_dwi_wf_biascorr" in "/work/qsiprep_wf/single_subject_CAM003_wf/dwi_preproc_ses_01brain_dir_AP_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_denoise_ses_01brain_dir_AP_dwi_wf/ds_report_dwi_denoise_ses_01brain_dir_AP_dwi_wf_biascorr". 230102-10:47:30,774 nipype.workflow INFO: [Node] Executing "ds_report_dwi_denoise_ses_01brain_dir_AP_dwi_wf_biascorr" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:47:30,777 nipype.workflow INFO: [Node] Finished "ds_report_dwi_denoise_ses_01brain_dir_AP_dwi_wf_biascorr", elapsed time 0.002369s. 230102-10:47:30,799 nipype.workflow INFO: [Job 36] Completed (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_ses_01brain_dir_AP_dwi_wf.ds_report_dwi_denoise_ses_01brain_dir_AP_dwi_wf_biascorr). 230102-10:47:30,945 nipype.workflow INFO: [Job 37] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_ses_01brain_dir_AP_dwi_wf.merge_confounds). 230102-10:47:30,952 nipype.workflow INFO: [Job 38] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.conformed_images). 230102-10:47:32,515 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 5 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:47:32,662 nipype.workflow INFO: [Job 39] Cached (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.t1_seg). 230102-10:47:32,675 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_preproc" in "/work/qsiprep_wf/single_subject_CAM003_wf/anat_preproc_wf/anat_derivatives_wf/ds_t1_preproc". 230102-10:47:32,730 nipype.workflow INFO: [Node] Executing "ds_t1_preproc" <qsiprep.workflows.anatomical.DerivativesDataSink> 230102-10:47:32,976 nipype.workflow INFO: [Node] Finished "ds_t1_preproc", elapsed time 0.245186s. 230102-10:47:32,998 nipype.workflow INFO: [Job 40] Completed (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_preproc). 230102-10:47:33,151 nipype.workflow INFO: [Job 41] Cached (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.t1_2_mni). 230102-10:47:33,162 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_mask" in "/work/qsiprep_wf/single_subject_CAM003_wf/anat_preproc_wf/anat_derivatives_wf/ds_t1_mask". 230102-10:47:33,217 nipype.workflow INFO: [Node] Executing "ds_t1_mask" <qsiprep.workflows.anatomical.DerivativesDataSink> 230102-10:47:33,241 nipype.workflow INFO: [Node] Finished "ds_t1_mask", elapsed time 0.022787s. 230102-10:47:33,261 nipype.workflow INFO: [Job 42] Completed (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_mask). 230102-10:47:33,409 nipype.workflow INFO: [Job 43] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_ses_01brain_dir_AP_dwi_wf.hstack_confounds). 230102-10:47:34,516 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 11 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:47:34,662 nipype.workflow INFO: [Job 44] Cached (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.seg2msks). 230102-10:47:34,671 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_seg" in "/work/qsiprep_wf/single_subject_CAM003_wf/anat_preproc_wf/anat_derivatives_wf/ds_t1_seg". 230102-10:47:34,725 nipype.workflow INFO: [Node] Executing "ds_t1_seg" <qsiprep.workflows.anatomical.DerivativesDataSink> 230102-10:47:34,751 nipype.workflow INFO: [Node] Finished "ds_t1_seg", elapsed time 0.024957s. 230102-10:47:34,772 nipype.workflow INFO: [Job 45] Completed (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_seg). 230102-10:47:34,916 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_tpms" in "/work/qsiprep_wf/single_subject_CAM003_wf/anat_preproc_wf/anat_derivatives_wf/ds_t1_tpms". 230102-10:47:34,979 nipype.workflow INFO: [Node] Executing "ds_t1_tpms" <qsiprep.workflows.anatomical.DerivativesDataSink> 230102-10:47:35,155 nipype.workflow INFO: [Node] Finished "ds_t1_tpms", elapsed time 0.175188s. 230102-10:47:35,181 nipype.workflow INFO: [Job 46] Completed (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_tpms). 230102-10:47:35,331 nipype.workflow INFO: [Job 47] Cached (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.mni_mask). 230102-10:47:35,339 nipype.workflow INFO: [Job 48] Cached (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.mni_seg). 230102-10:47:35,370 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_mni_warp" in "/work/qsiprep_wf/single_subject_CAM003_wf/anat_preproc_wf/anat_derivatives_wf/ds_t1_mni_warp". 230102-10:47:35,424 nipype.workflow INFO: [Node] Executing "ds_t1_mni_warp" <qsiprep.workflows.anatomical.DerivativesDataSink> 230102-10:47:35,750 nipype.workflow INFO: [Node] Finished "ds_t1_mni_warp", elapsed time 0.325154s. 230102-10:47:35,770 nipype.workflow INFO: [Job 50] Completed (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_mni_warp). 230102-10:47:35,909 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_mni_inv_warp" in "/work/qsiprep_wf/single_subject_CAM003_wf/anat_preproc_wf/anat_derivatives_wf/ds_t1_mni_inv_warp". 230102-10:47:35,966 nipype.workflow INFO: [Node] Executing "ds_t1_mni_inv_warp" <qsiprep.workflows.anatomical.DerivativesDataSink> 230102-10:47:36,282 nipype.workflow INFO: [Node] Finished "ds_t1_mni_inv_warp", elapsed time 0.315407s. 230102-10:47:36,306 nipype.workflow INFO: [Job 51] Completed (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_mni_inv_warp). 230102-10:47:36,455 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_mni" in "/work/qsiprep_wf/single_subject_CAM003_wf/anat_preproc_wf/anat_derivatives_wf/ds_t1_mni". 230102-10:47:36,517 nipype.workflow INFO: [Node] Executing "ds_t1_mni" <qsiprep.workflows.anatomical.DerivativesDataSink> 230102-10:47:36,582 nipype.workflow INFO: [Node] Finished "ds_t1_mni", elapsed time 0.064379s. 230102-10:47:36,603 nipype.workflow INFO: [Job 52] Completed (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_mni). 230102-10:47:36,751 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_reports_wf.ds_t1_2_mni_report" in "/work/qsiprep_wf/single_subject_CAM003_wf/anat_preproc_wf/anat_reports_wf/ds_t1_2_mni_report". 230102-10:47:36,814 nipype.workflow INFO: [Node] Executing "ds_t1_2_mni_report" <qsiprep.workflows.anatomical.DerivativesDataSink> 230102-10:47:36,817 nipype.workflow INFO: [Node] Finished "ds_t1_2_mni_report", elapsed time 0.002042s. 230102-10:47:36,836 nipype.workflow INFO: [Job 53] Completed (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_reports_wf.ds_t1_2_mni_report). 230102-10:47:36,985 nipype.workflow INFO: [Job 54] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.denoising_confounds). 230102-10:47:36,988 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 7 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:47:37,150 nipype.workflow INFO: [Job 55] Cached (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.seg_rpt). 230102-10:47:37,160 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_derivatives_wf.ds_mni_mask" in "/work/qsiprep_wf/single_subject_CAM003_wf/anat_preproc_wf/anat_derivatives_wf/ds_mni_mask". 230102-10:47:37,221 nipype.workflow INFO: [Node] Executing "ds_mni_mask" <qsiprep.workflows.anatomical.DerivativesDataSink> 230102-10:47:37,246 nipype.workflow INFO: [Node] Finished "ds_mni_mask", elapsed time 0.024262s. 230102-10:47:37,268 nipype.workflow INFO: [Job 56] Completed (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_derivatives_wf.ds_mni_mask). 230102-10:47:37,416 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_derivatives_wf.ds_mni_seg" in "/work/qsiprep_wf/single_subject_CAM003_wf/anat_preproc_wf/anat_derivatives_wf/ds_mni_seg". 230102-10:47:37,477 nipype.workflow INFO: [Node] Executing "ds_mni_seg" <qsiprep.workflows.anatomical.DerivativesDataSink> 230102-10:47:37,507 nipype.workflow INFO: [Node] Finished "ds_mni_seg", elapsed time 0.028931s. 230102-10:47:37,528 nipype.workflow INFO: [Job 57] Completed (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_derivatives_wf.ds_mni_seg). 230102-10:47:37,690 nipype.workflow INFO: [Job 59] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.merge_dwis). 230102-10:47:37,701 nipype.workflow INFO: [Job 137] Cached (_mni_tpms0). 230102-10:47:37,708 nipype.workflow INFO: [Job 138] Cached (_mni_tpms1). 230102-10:47:37,714 nipype.workflow INFO: [Job 139] Cached (_mni_tpms2). 230102-10:47:38,989 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 5 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:47:39,136 nipype.workflow INFO: [Job 49] Cached (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.mni_tpms). 230102-10:47:39,155 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_reports_wf.ds_t1_seg_mask_report" in "/work/qsiprep_wf/single_subject_CAM003_wf/anat_preproc_wf/anat_reports_wf/ds_t1_seg_mask_report". 230102-10:47:39,214 nipype.workflow INFO: [Node] Executing "ds_t1_seg_mask_report" <qsiprep.workflows.anatomical.DerivativesDataSink> 230102-10:47:39,218 nipype.workflow INFO: [Node] Finished "ds_t1_seg_mask_report", elapsed time 0.002865s. 230102-10:47:39,240 nipype.workflow INFO: [Job 60] Completed (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_reports_wf.ds_t1_seg_mask_report). 230102-10:47:39,392 nipype.workflow INFO: [Job 61] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.raw_src). 230102-10:47:39,401 nipype.workflow INFO: [Job 62] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.dwi_qc_wf.raw_src). 230102-10:47:39,421 nipype.workflow INFO: [Job 63] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.hmc_sdc_wf.gather_inputs). 230102-10:47:40,991 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 10 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:47:41,142 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_derivatives_wf.ds_mni_tpms" in "/work/qsiprep_wf/single_subject_CAM003_wf/anat_preproc_wf/anat_derivatives_wf/ds_mni_tpms". 230102-10:47:41,204 nipype.workflow INFO: [Node] Executing "ds_mni_tpms" <qsiprep.workflows.anatomical.DerivativesDataSink> 230102-10:47:41,393 nipype.workflow INFO: [Node] Finished "ds_mni_tpms", elapsed time 0.187975s. 230102-10:47:41,414 nipype.workflow INFO: [Job 58] Completed (qsiprep_wf.single_subject_CAM003_wf.anat_preproc_wf.anat_derivatives_wf.ds_mni_tpms). 230102-10:47:41,564 nipype.workflow INFO: [Job 64] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.raw_src_qc). 230102-10:47:41,571 nipype.workflow INFO: [Job 65] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.raw_gqi). 230102-10:47:41,581 nipype.workflow INFO: [Job 66] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.dwi_qc_wf.raw_src_qc). 230102-10:47:41,588 nipype.workflow INFO: [Job 67] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.dwi_qc_wf.raw_gqi). 230102-10:47:41,599 nipype.workflow INFO: [Job 68] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.hmc_sdc_wf.enhance_pre_sdc). 230102-10:47:41,609 nipype.workflow INFO: [Job 69] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.hmc_sdc_wf.topup). 230102-10:47:41,618 nipype.workflow INFO: [Job 70] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.hmc_sdc_wf.topup_to_eddy_reg). 230102-10:47:41,627 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.hmc_sdc_wf.ds_topupcsv" in "/work/qsiprep_wf/single_subject_CAM003_wf/dwi_preproc_ses_01brain_dir_AP_wf/hmc_sdc_wf/ds_topupcsv". 230102-10:47:41,723 nipype.workflow INFO: [Node] Executing "ds_topupcsv" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:47:41,740 nipype.workflow INFO: [Node] Finished "ds_topupcsv", elapsed time 0.015838s. 230102-10:47:41,771 nipype.workflow INFO: [Job 71] Completed (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.hmc_sdc_wf.ds_topupcsv). 230102-10:47:41,918 nipype.workflow INFO: [Job 72] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.hmc_sdc_wf.topup_summary). 230102-10:47:42,992 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 4 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:47:43,140 nipype.workflow INFO: [Job 73] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.raw_fib_qc). 230102-10:47:43,150 nipype.workflow INFO: [Job 74] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.dwi_qc_wf.raw_fib_qc). 230102-10:47:43,160 nipype.workflow INFO: [Job 75] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.hmc_sdc_wf.unwarped_mean). 230102-10:47:43,175 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.hmc_sdc_wf.ds_report_topupsummary" in "/work/qsiprep_wf/single_subject_CAM003_wf/dwi_preproc_ses_01brain_dir_AP_wf/hmc_sdc_wf/ds_report_topupsummary". 230102-10:47:43,233 nipype.workflow INFO: [Node] Executing "ds_report_topupsummary" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:47:43,236 nipype.workflow INFO: [Node] Finished "ds_report_topupsummary", elapsed time 0.002111s. 230102-10:47:43,258 nipype.workflow INFO: [Job 76] Completed (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.hmc_sdc_wf.ds_report_topupsummary). 230102-10:47:44,994 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 3 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:47:45,145 nipype.workflow INFO: [Job 77] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.merged_qc). 230102-10:47:45,157 nipype.workflow INFO: [Job 78] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.pre_hmc_wf.dwi_qc_wf.merged_qc). 230102-10:47:45,181 nipype.workflow INFO: [Job 79] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.hmc_sdc_wf.pre_eddy_b0_ref_wf.register_t1_to_raw). 230102-10:47:46,996 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 1 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:47:47,150 nipype.workflow INFO: [Job 80] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.hmc_sdc_wf.pre_eddy_b0_ref_wf.t1_mask_to_b0). 230102-10:47:49,148 nipype.workflow INFO: [Job 81] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.hmc_sdc_wf.pre_eddy_b0_ref_wf.enhance_and_mask_b0). 230102-10:47:51,0 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 4 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:47:51,159 nipype.workflow INFO: [Job 82] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.hmc_sdc_wf.b0_ref_to_lps). 230102-10:47:51,169 nipype.workflow INFO: [Job 83] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.hmc_sdc_wf.b0_ref_mask_to_lps). 230102-10:47:51,208 nipype.workflow INFO: [Job 84] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.hmc_sdc_wf.eddy). 230102-10:47:51,217 nipype.workflow INFO: [Job 85] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.hmc_sdc_wf.b0_ref_brain_to_lps). 230102-10:47:53,159 nipype.workflow INFO: [Job 86] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.b0_anat_coreg.b0_to_anat). 230102-10:47:53,173 nipype.workflow INFO: [Job 87] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.hmc_sdc_wf.back_to_lps). 230102-10:47:53,181 nipype.workflow INFO: [Job 88] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.hmc_sdc_wf.cnr_lps). 230102-10:47:53,189 nipype.workflow INFO: [Job 89] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.hmc_sdc_wf.spm_motion). 230102-10:47:55,4 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 6 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:47:55,160 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.ds_report_coreg" in "/work/qsiprep_wf/single_subject_CAM003_wf/dwi_preproc_ses_01brain_dir_AP_wf/ds_report_coreg". 230102-10:47:55,222 nipype.workflow INFO: [Node] Executing "ds_report_coreg" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:47:55,226 nipype.workflow INFO: [Node] Finished "ds_report_coreg", elapsed time 0.003179s. 230102-10:47:55,252 nipype.workflow INFO: [Job 90] Completed (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.ds_report_coreg). 230102-10:47:55,405 nipype.workflow INFO: [Job 91] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.fmap_unwarp_report_wf.map_seg). 230102-10:47:55,439 nipype.workflow INFO: [Job 92] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.hmc_sdc_wf.split_eddy_lps). 230102-10:47:55,449 nipype.workflow INFO: [Job 93] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.transform_dwis_t1.cnr_image_type). 230102-10:47:55,461 nipype.workflow INFO: [Job 94] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.confounds_wf.fdisp). 230102-10:47:55,472 nipype.workflow INFO: [Job 95] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.confounds_wf.add_motion_headers). 230102-10:47:57,5 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 4 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:47:57,153 nipype.workflow INFO: [Job 96] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.fmap_unwarp_report_wf.sel_wm). 230102-10:47:57,218 nipype.workflow INFO: [Job 97] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.transform_dwis_t1.compose_transforms). 230102-10:47:57,262 nipype.workflow INFO: [Job 98] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.transform_dwis_t1.get_interpolation). 230102-10:47:57,291 nipype.workflow INFO: [Job 99] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.confounds_wf.concat). 230102-10:47:59,7 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 6 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:47:59,167 nipype.workflow INFO: [Job 100] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.fmap_unwarp_report_wf.dwi_rpt). 230102-10:47:59,204 nipype.workflow INFO: [Job 101] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.transform_dwis_t1.cnr_tfm). 230102-10:47:59,573 nipype.workflow INFO: [Job 102] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.transform_dwis_t1.rotate_gradients). 230102-10:47:59,751 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.ds_confounds" in "/work/qsiprep_wf/single_subject_CAM003_wf/dwi_preproc_ses_01brain_dir_AP_wf/ds_confounds". 230102-10:47:59,813 nipype.workflow INFO: [Node] Executing "ds_confounds" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:47:59,844 nipype.workflow INFO: [Node] Finished "ds_confounds", elapsed time 0.030113s. 230102-10:47:59,864 nipype.workflow INFO: [Job 104] Completed (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.ds_confounds). 230102-10:48:00,18 nipype.workflow INFO: [Job 105] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.conf_plot). 230102-10:48:01,9 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 139 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:48:01,165 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.ds_report_sdc" in "/work/qsiprep_wf/single_subject_CAM003_wf/dwi_preproc_ses_01brain_dir_AP_wf/ds_report_sdc". 230102-10:48:01,232 nipype.workflow INFO: [Node] Executing "ds_report_sdc" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:48:01,237 nipype.workflow INFO: [Node] Finished "ds_report_sdc", elapsed time 0.003517s. 230102-10:48:01,259 nipype.workflow INFO: [Job 106] Completed (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.ds_report_sdc). 230102-10:48:01,408 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.dwi_derivatives_wf.ds_cnr_map_t1" in "/work/qsiprep_wf/single_subject_CAM003_wf/dwi_finalize_ses_01brain_dir_AP_wf/dwi_derivatives_wf/ds_cnr_map_t1". 230102-10:48:01,470 nipype.workflow INFO: [Node] Executing "ds_cnr_map_t1" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:48:01,700 nipype.workflow INFO: [Node] Finished "ds_cnr_map_t1", elapsed time 0.229394s. 230102-10:48:01,731 nipype.workflow INFO: [Job 107] Completed (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.dwi_derivatives_wf.ds_cnr_map_t1). 230102-10:48:01,881 nipype.workflow INFO: [Job 108] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.gtab_t1). 230102-10:48:01,938 nipype.workflow INFO: [Job 109] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.gradient_plot). 230102-10:48:01,948 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.dwi_derivatives_wf.ds_bvals_t1" in "/work/qsiprep_wf/single_subject_CAM003_wf/dwi_finalize_ses_01brain_dir_AP_wf/dwi_derivatives_wf/ds_bvals_t1". 230102-10:48:02,14 nipype.workflow INFO: [Node] Executing "ds_bvals_t1" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:48:02,37 nipype.workflow INFO: [Node] Finished "ds_bvals_t1", elapsed time 0.02153s. 230102-10:48:02,57 nipype.workflow INFO: [Job 110] Completed (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.dwi_derivatives_wf.ds_bvals_t1). 230102-10:48:02,213 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.dwi_derivatives_wf.ds_bvecs_t1" in "/work/qsiprep_wf/single_subject_CAM003_wf/dwi_finalize_ses_01brain_dir_AP_wf/dwi_derivatives_wf/ds_bvecs_t1". 230102-10:48:02,277 nipype.workflow INFO: [Node] Executing "ds_bvecs_t1" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:48:02,299 nipype.workflow INFO: [Node] Finished "ds_bvecs_t1", elapsed time 0.02092s. 230102-10:48:02,322 nipype.workflow INFO: [Job 111] Completed (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.dwi_derivatives_wf.ds_bvecs_t1). 230102-10:48:02,475 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.ds_report_dwi_conf" in "/work/qsiprep_wf/single_subject_CAM003_wf/dwi_preproc_ses_01brain_dir_AP_wf/ds_report_dwi_conf". 230102-10:48:02,533 nipype.workflow INFO: [Node] Executing "ds_report_dwi_conf" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:48:02,537 nipype.workflow INFO: [Node] Finished "ds_report_dwi_conf", elapsed time 0.002922s. 230102-10:48:02,560 nipype.workflow INFO: [Job 113] Completed (qsiprep_wf.single_subject_CAM003_wf.dwi_preproc_ses_01brain_dir_AP_wf.ds_report_dwi_conf). 230102-10:48:02,709 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.ds_carpetplot" in "/work/qsiprep_wf/single_subject_CAM003_wf/dwi_finalize_ses_01brain_dir_AP_wf/ds_carpetplot". 230102-10:48:02,772 nipype.workflow INFO: [Node] Executing "ds_carpetplot" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:48:02,796 nipype.workflow INFO: [Node] Finished "ds_carpetplot", elapsed time 0.023785s. 230102-10:48:02,819 nipype.workflow INFO: [Job 114] Completed (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.ds_carpetplot). 230102-10:48:02,964 nipype.workflow INFO: [Job 140] Cached (_dwi_transform0). 230102-10:48:02,972 nipype.workflow INFO: [Job 141] Cached (_dwi_transform1). 230102-10:48:02,979 nipype.workflow INFO: [Job 142] Cached (_dwi_transform2). 230102-10:48:02,988 nipype.workflow INFO: [Job 143] Cached (_dwi_transform3). 230102-10:48:02,996 nipype.workflow INFO: [Job 144] Cached (_dwi_transform4). 230102-10:48:03,3 nipype.workflow INFO: [Job 145] Cached (_dwi_transform5). 230102-10:48:03,11 nipype.workflow INFO: [Job 146] Cached (_dwi_transform6). 230102-10:48:03,18 nipype.workflow INFO: [Job 147] Cached (_dwi_transform7). 230102-10:48:03,26 nipype.workflow INFO: [Job 148] Cached (_dwi_transform8). 230102-10:48:03,34 nipype.workflow INFO: [Job 149] Cached (_dwi_transform9). 230102-10:48:03,41 nipype.workflow INFO: [Job 150] Cached (_dwi_transform10). 230102-10:48:03,49 nipype.workflow INFO: [Job 151] Cached (_dwi_transform11). 230102-10:48:03,57 nipype.workflow INFO: [Job 152] Cached (_dwi_transform12). 230102-10:48:03,65 nipype.workflow INFO: [Job 153] Cached (_dwi_transform13). 230102-10:48:03,67 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 119 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:48:03,222 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.dwi_derivatives_wf.ds_gradient_table_t1" in "/work/qsiprep_wf/single_subject_CAM003_wf/dwi_finalize_ses_01brain_dir_AP_wf/dwi_derivatives_wf/ds_gradient_table_t1". 230102-10:48:03,290 nipype.workflow INFO: [Node] Executing "ds_gradient_table_t1" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:48:03,313 nipype.workflow INFO: [Node] Finished "ds_gradient_table_t1", elapsed time 0.022756s. 230102-10:48:03,339 nipype.workflow INFO: [Job 115] Completed (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.dwi_derivatives_wf.ds_gradient_table_t1). 230102-10:48:03,488 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.ds_report_gradients" in "/work/qsiprep_wf/single_subject_CAM003_wf/dwi_finalize_ses_01brain_dir_AP_wf/ds_report_gradients". 230102-10:48:03,548 nipype.workflow INFO: [Node] Executing "ds_report_gradients" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:48:03,551 nipype.workflow INFO: [Node] Finished "ds_report_gradients", elapsed time 0.002226s. 230102-10:48:03,573 nipype.workflow INFO: [Job 116] Completed (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.ds_report_gradients). 230102-10:48:03,720 nipype.workflow INFO: [Job 154] Cached (_dwi_transform14). 230102-10:48:03,728 nipype.workflow INFO: [Job 155] Cached (_dwi_transform15). 230102-10:48:03,735 nipype.workflow INFO: [Job 156] Cached (_dwi_transform16). 230102-10:48:03,742 nipype.workflow INFO: [Job 157] Cached (_dwi_transform17). 230102-10:48:03,751 nipype.workflow INFO: [Job 158] Cached (_dwi_transform18). 230102-10:48:03,758 nipype.workflow INFO: [Job 159] Cached (_dwi_transform19). 230102-10:48:03,765 nipype.workflow INFO: [Job 160] Cached (_dwi_transform20). 230102-10:48:03,772 nipype.workflow INFO: [Job 161] Cached (_dwi_transform21). 230102-10:48:03,779 nipype.workflow INFO: [Job 162] Cached (_dwi_transform22). 230102-10:48:03,785 nipype.workflow INFO: [Job 163] Cached (_dwi_transform23). 230102-10:48:03,793 nipype.workflow INFO: [Job 164] Cached (_dwi_transform24). 230102-10:48:03,799 nipype.workflow INFO: [Job 165] Cached (_dwi_transform25). 230102-10:48:03,806 nipype.workflow INFO: [Job 166] Cached (_dwi_transform26). 230102-10:48:03,813 nipype.workflow INFO: [Job 167] Cached (_dwi_transform27). 230102-10:48:03,820 nipype.workflow INFO: [Job 168] Cached (_dwi_transform28). 230102-10:48:03,828 nipype.workflow INFO: [Job 169] Cached (_dwi_transform29). 230102-10:48:05,69 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 101 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:48:05,214 nipype.workflow INFO: [Job 170] Cached (_dwi_transform30). 230102-10:48:05,221 nipype.workflow INFO: [Job 171] Cached (_dwi_transform31). 230102-10:48:05,228 nipype.workflow INFO: [Job 172] Cached (_dwi_transform32). 230102-10:48:05,236 nipype.workflow INFO: [Job 173] Cached (_dwi_transform33). 230102-10:48:05,244 nipype.workflow INFO: [Job 174] Cached (_dwi_transform34). 230102-10:48:05,253 nipype.workflow INFO: [Job 175] Cached (_dwi_transform35). 230102-10:48:05,262 nipype.workflow INFO: [Job 176] Cached (_dwi_transform36). 230102-10:48:05,272 nipype.workflow INFO: [Job 177] Cached (_dwi_transform37). 230102-10:48:05,279 nipype.workflow INFO: [Job 178] Cached (_dwi_transform38). 230102-10:48:05,286 nipype.workflow INFO: [Job 179] Cached (_dwi_transform39). 230102-10:48:05,293 nipype.workflow INFO: [Job 180] Cached (_dwi_transform40). 230102-10:48:05,301 nipype.workflow INFO: [Job 181] Cached (_dwi_transform41). 230102-10:48:05,309 nipype.workflow INFO: [Job 182] Cached (_dwi_transform42). 230102-10:48:05,315 nipype.workflow INFO: [Job 183] Cached (_dwi_transform43). 230102-10:48:05,322 nipype.workflow INFO: [Job 184] Cached (_dwi_transform44). 230102-10:48:05,329 nipype.workflow INFO: [Job 185] Cached (_dwi_transform45). 230102-10:48:07,71 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 85 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:48:07,216 nipype.workflow INFO: [Job 186] Cached (_dwi_transform46). 230102-10:48:07,223 nipype.workflow INFO: [Job 187] Cached (_dwi_transform47). 230102-10:48:07,229 nipype.workflow INFO: [Job 188] Cached (_dwi_transform48). 230102-10:48:07,237 nipype.workflow INFO: [Job 189] Cached (_dwi_transform49). 230102-10:48:07,244 nipype.workflow INFO: [Job 190] Cached (_dwi_transform50). 230102-10:48:07,251 nipype.workflow INFO: [Job 191] Cached (_dwi_transform51). 230102-10:48:07,258 nipype.workflow INFO: [Job 192] Cached (_dwi_transform52). 230102-10:48:07,265 nipype.workflow INFO: [Job 193] Cached (_dwi_transform53). 230102-10:48:07,272 nipype.workflow INFO: [Job 194] Cached (_dwi_transform54). 230102-10:48:07,279 nipype.workflow INFO: [Job 195] Cached (_dwi_transform55). 230102-10:48:07,286 nipype.workflow INFO: [Job 196] Cached (_dwi_transform56). 230102-10:48:07,294 nipype.workflow INFO: [Job 197] Cached (_dwi_transform57). 230102-10:48:07,301 nipype.workflow INFO: [Job 198] Cached (_dwi_transform58). 230102-10:48:07,316 nipype.workflow INFO: [Job 199] Cached (_dwi_transform59). 230102-10:48:07,323 nipype.workflow INFO: [Job 200] Cached (_dwi_transform60). 230102-10:48:07,331 nipype.workflow INFO: [Job 201] Cached (_dwi_transform61). 230102-10:48:09,73 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 69 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:48:09,217 nipype.workflow INFO: [Job 202] Cached (_dwi_transform62). 230102-10:48:09,225 nipype.workflow INFO: [Job 203] Cached (_dwi_transform63). 230102-10:48:09,233 nipype.workflow INFO: [Job 204] Cached (_dwi_transform64). 230102-10:48:09,239 nipype.workflow INFO: [Job 205] Cached (_dwi_transform65). 230102-10:48:09,247 nipype.workflow INFO: [Job 206] Cached (_dwi_transform66). 230102-10:48:09,254 nipype.workflow INFO: [Job 207] Cached (_dwi_transform67). 230102-10:48:09,261 nipype.workflow INFO: [Job 208] Cached (_dwi_transform68). 230102-10:48:09,268 nipype.workflow INFO: [Job 209] Cached (_dwi_transform69). 230102-10:48:09,275 nipype.workflow INFO: [Job 210] Cached (_dwi_transform70). 230102-10:48:09,281 nipype.workflow INFO: [Job 211] Cached (_dwi_transform71). 230102-10:48:09,289 nipype.workflow INFO: [Job 212] Cached (_dwi_transform72). 230102-10:48:09,296 nipype.workflow INFO: [Job 213] Cached (_dwi_transform73). 230102-10:48:09,304 nipype.workflow INFO: [Job 214] Cached (_dwi_transform74). 230102-10:48:09,311 nipype.workflow INFO: [Job 215] Cached (_dwi_transform75). 230102-10:48:09,317 nipype.workflow INFO: [Job 216] Cached (_dwi_transform76). 230102-10:48:09,324 nipype.workflow INFO: [Job 217] Cached (_dwi_transform77). 230102-10:48:11,74 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 53 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:48:11,219 nipype.workflow INFO: [Job 218] Cached (_dwi_transform78). 230102-10:48:11,227 nipype.workflow INFO: [Job 219] Cached (_dwi_transform79). 230102-10:48:11,233 nipype.workflow INFO: [Job 220] Cached (_dwi_transform80). 230102-10:48:11,240 nipype.workflow INFO: [Job 221] Cached (_dwi_transform81). 230102-10:48:11,247 nipype.workflow INFO: [Job 222] Cached (_dwi_transform82). 230102-10:48:11,254 nipype.workflow INFO: [Job 223] Cached (_dwi_transform83). 230102-10:48:11,261 nipype.workflow INFO: [Job 224] Cached (_dwi_transform84). 230102-10:48:11,268 nipype.workflow INFO: [Job 225] Cached (_dwi_transform85). 230102-10:48:11,276 nipype.workflow INFO: [Job 226] Cached (_dwi_transform86). 230102-10:48:11,283 nipype.workflow INFO: [Job 227] Cached (_dwi_transform87). 230102-10:48:11,290 nipype.workflow INFO: [Job 228] Cached (_dwi_transform88). 230102-10:48:11,296 nipype.workflow INFO: [Job 229] Cached (_dwi_transform89). 230102-10:48:11,303 nipype.workflow INFO: [Job 230] Cached (_dwi_transform90). 230102-10:48:11,310 nipype.workflow INFO: [Job 231] Cached (_dwi_transform91). 230102-10:48:11,317 nipype.workflow INFO: [Job 232] Cached (_dwi_transform92). 230102-10:48:11,324 nipype.workflow INFO: [Job 233] Cached (_dwi_transform93). 230102-10:48:13,76 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 37 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:48:13,221 nipype.workflow INFO: [Job 234] Cached (_dwi_transform94). 230102-10:48:13,229 nipype.workflow INFO: [Job 235] Cached (_dwi_transform95). 230102-10:48:13,236 nipype.workflow INFO: [Job 236] Cached (_dwi_transform96). 230102-10:48:13,243 nipype.workflow INFO: [Job 237] Cached (_dwi_transform97). 230102-10:48:13,250 nipype.workflow INFO: [Job 238] Cached (_dwi_transform98). 230102-10:48:13,257 nipype.workflow INFO: [Job 239] Cached (_dwi_transform99). 230102-10:48:13,264 nipype.workflow INFO: [Job 240] Cached (_dwi_transform100). 230102-10:48:13,271 nipype.workflow INFO: [Job 241] Cached (_dwi_transform101). 230102-10:48:13,278 nipype.workflow INFO: [Job 242] Cached (_dwi_transform102). 230102-10:48:13,285 nipype.workflow INFO: [Job 243] Cached (_dwi_transform103). 230102-10:48:13,292 nipype.workflow INFO: [Job 244] Cached (_dwi_transform104). 230102-10:48:13,298 nipype.workflow INFO: [Job 245] Cached (_dwi_transform105). 230102-10:48:13,305 nipype.workflow INFO: [Job 246] Cached (_dwi_transform106). 230102-10:48:13,313 nipype.workflow INFO: [Job 247] Cached (_dwi_transform107). 230102-10:48:13,320 nipype.workflow INFO: [Job 248] Cached (_dwi_transform108). 230102-10:48:13,327 nipype.workflow INFO: [Job 249] Cached (_dwi_transform109). 230102-10:48:15,78 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 21 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:48:15,225 nipype.workflow INFO: [Job 250] Cached (_dwi_transform110). 230102-10:48:15,234 nipype.workflow INFO: [Job 251] Cached (_dwi_transform111). 230102-10:48:15,241 nipype.workflow INFO: [Job 252] Cached (_dwi_transform112). 230102-10:48:15,248 nipype.workflow INFO: [Job 253] Cached (_dwi_transform113). 230102-10:48:15,255 nipype.workflow INFO: [Job 254] Cached (_dwi_transform114). 230102-10:48:15,263 nipype.workflow INFO: [Job 255] Cached (_dwi_transform115). 230102-10:48:15,270 nipype.workflow INFO: [Job 256] Cached (_dwi_transform116). 230102-10:48:15,277 nipype.workflow INFO: [Job 257] Cached (_dwi_transform117). 230102-10:48:15,284 nipype.workflow INFO: [Job 258] Cached (_dwi_transform118). 230102-10:48:15,292 nipype.workflow INFO: [Job 259] Cached (_dwi_transform119). 230102-10:48:15,299 nipype.workflow INFO: [Job 260] Cached (_dwi_transform120). 230102-10:48:15,306 nipype.workflow INFO: [Job 261] Cached (_dwi_transform121). 230102-10:48:15,314 nipype.workflow INFO: [Job 262] Cached (_dwi_transform122). 230102-10:48:15,322 nipype.workflow INFO: [Job 263] Cached (_dwi_transform123). 230102-10:48:15,330 nipype.workflow INFO: [Job 264] Cached (_dwi_transform124). 230102-10:48:15,337 nipype.workflow INFO: [Job 265] Cached (_dwi_transform125). 230102-10:48:17,80 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 5 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:48:17,227 nipype.workflow INFO: [Job 266] Cached (_dwi_transform126). 230102-10:48:17,234 nipype.workflow INFO: [Job 267] Cached (_dwi_transform127). 230102-10:48:17,241 nipype.workflow INFO: [Job 268] Cached (_dwi_transform128). 230102-10:48:17,248 nipype.workflow INFO: [Job 269] Cached (_dwi_transform129). 230102-10:48:17,256 nipype.workflow INFO: [Job 270] Cached (_dwi_transform130). 230102-10:48:19,82 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 1 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:48:19,297 nipype.workflow INFO: [Job 103] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.transform_dwis_t1.dwi_transform). 230102-10:48:21,346 nipype.workflow INFO: [Job 112] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.transform_dwis_t1.merge). 230102-10:48:23,86 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 3 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:48:23,336 nipype.workflow INFO: [Job 117] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.transform_dwis_t1.extract_b0_series). 230102-10:48:23,348 nipype.workflow INFO: [Job 118] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.transform_dwis_t1.calculate_qc.raw_src). 230102-10:48:23,354 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.dwi_derivatives_wf.ds_dwi_t1" in "/work/qsiprep_wf/single_subject_CAM003_wf/dwi_finalize_ses_01brain_dir_AP_wf/dwi_derivatives_wf/ds_dwi_t1". 230102-10:48:23,411 nipype.workflow INFO: [Node] Executing "ds_dwi_t1" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:49:30,618 nipype.workflow INFO: [Node] Finished "ds_dwi_t1", elapsed time 67.205148s. 230102-10:49:30,643 nipype.workflow INFO: [Job 119] Completed (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.dwi_derivatives_wf.ds_dwi_t1). 230102-10:49:30,783 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 3 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:49:30,941 nipype.workflow INFO: [Job 120] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.transform_dwis_t1.final_b0_ref.t1_mask_to_b0). 230102-10:49:30,953 nipype.workflow INFO: [Job 121] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.transform_dwis_t1.calculate_qc.raw_src_qc). 230102-10:49:30,959 nipype.workflow INFO: [Job 122] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.transform_dwis_t1.calculate_qc.raw_gqi). 230102-10:49:32,785 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 2 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:49:32,931 nipype.workflow INFO: [Job 123] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.transform_dwis_t1.final_b0_ref.enhance_and_mask_b0). 230102-10:49:32,941 nipype.workflow INFO: [Job 124] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.transform_dwis_t1.calculate_qc.raw_fib_qc). 230102-10:49:34,787 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 6 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:49:34,931 nipype.workflow INFO: [Job 125] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.transform_dwis_t1.final_b0_ref.b0ref_reportlet). 230102-10:49:34,947 nipype.workflow INFO: [Job 126] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.t1_dice_calc.downsample_t1_mask). 230102-10:49:34,964 nipype.workflow INFO: [Job 127] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.interactive_report_wf.tensor_fit). 230102-10:49:34,976 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.dwi_derivatives_wf.ds_t1_b0_ref" in "/work/qsiprep_wf/single_subject_CAM003_wf/dwi_finalize_ses_01brain_dir_AP_wf/dwi_derivatives_wf/ds_t1_b0_ref". 230102-10:49:35,38 nipype.workflow INFO: [Node] Executing "ds_t1_b0_ref" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:49:54,118 nipype.workflow INFO: [Node] Finished "ds_t1_b0_ref", elapsed time 19.07908s. 230102-10:49:54,143 nipype.workflow INFO: [Job 128] Completed (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.dwi_derivatives_wf.ds_t1_b0_ref). 230102-10:49:54,292 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.dwi_derivatives_wf.ds_dwi_mask_t1" in "/work/qsiprep_wf/single_subject_CAM003_wf/dwi_finalize_ses_01brain_dir_AP_wf/dwi_derivatives_wf/ds_dwi_mask_t1". 230102-10:49:54,354 nipype.workflow INFO: [Node] Executing "ds_dwi_mask_t1" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:49:54,522 nipype.workflow INFO: [Node] Finished "ds_dwi_mask_t1", elapsed time 0.167639s. 230102-10:49:54,544 nipype.workflow INFO: [Job 129] Completed (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.dwi_derivatives_wf.ds_dwi_mask_t1). 230102-10:49:54,694 nipype.workflow INFO: [Job 130] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.transform_dwis_t1.calculate_qc.merged_qc). 230102-10:49:54,697 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 2 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:49:54,845 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.transform_dwis_t1.final_b0_ref.ds_report_b0_mask" in "/work/qsiprep_wf/single_subject_CAM003_wf/dwi_finalize_ses_01brain_dir_AP_wf/transform_dwis_t1/final_b0_ref/ds_report_b0_mask". 230102-10:49:54,909 nipype.workflow INFO: [Node] Executing "ds_report_b0_mask" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:49:54,916 nipype.workflow INFO: [Node] Finished "ds_report_b0_mask", elapsed time 0.00644s. 230102-10:49:54,936 nipype.workflow INFO: [Job 131] Completed (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.transform_dwis_t1.final_b0_ref.ds_report_b0_mask). 230102-10:49:55,84 nipype.workflow INFO: [Job 132] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.t1_dice_calc.calculate_dice). 230102-10:49:56,699 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 1 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:49:56,859 nipype.workflow INFO: [Job 133] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.series_qc). 230102-10:49:58,701 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 2 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:49:58,847 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.ds_series_qc" in "/work/qsiprep_wf/single_subject_CAM003_wf/dwi_finalize_ses_01brain_dir_AP_wf/ds_series_qc". 230102-10:49:58,904 nipype.workflow INFO: [Node] Executing "ds_series_qc" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:49:58,924 nipype.workflow INFO: [Node] Finished "ds_series_qc", elapsed time 0.018625s. 230102-10:49:58,944 nipype.workflow INFO: [Job 134] Completed (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.ds_series_qc). 230102-10:49:59,108 nipype.workflow INFO: [Job 135] Cached (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.interactive_report_wf.interactive_report). 230102-10:50:00,703 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 1 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:50:00,849 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.ds_interactive_report" in "/work/qsiprep_wf/single_subject_CAM003_wf/dwi_finalize_ses_01brain_dir_AP_wf/ds_interactive_report". 230102-10:50:00,908 nipype.workflow INFO: [Node] Executing "ds_interactive_report" <qsiprep.interfaces.bids.DerivativesDataSink> 230102-10:50:01,4 nipype.workflow INFO: [Node] Finished "ds_interactive_report", elapsed time 0.094774s. 230102-10:50:01,25 nipype.workflow INFO: [Job 136] Completed (qsiprep_wf.single_subject_CAM003_wf.dwi_finalize_ses_01brain_dir_AP_wf.ds_interactive_report). 230102-10:50:14,954 nipype.workflow IMPORTANT: Running qsirecon version 0.16.1: * BIDS dataset path: /data. * Participant list: ['CAM003']. * Run identifier: 20230102-105012_c0e09991-77e8-42d3-a5aa-01ac8390ffd9. IMPORTANT:nipype.workflow: Running qsirecon version 0.16.1: * BIDS dataset path: /data. * Participant list: ['CAM003']. * Run identifier: 20230102-105012_c0e09991-77e8-42d3-a5aa-01ac8390ffd9. 230102-10:50:15,136 nipype.workflow INFO: found ['/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz'] in /out/qsiprep INFO:nipype.workflow:found ['/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz'] in /out/qsiprep 230102-10:50:15,139 nipype.workflow INFO: Found usable QSIPrep-preprocessed T1w image and mask. INFO:nipype.workflow:Found usable QSIPrep-preprocessed T1w image and mask. 230102-10:50:15,141 nipype.workflow INFO: Found T1w-to-template transforms INFO:nipype.workflow:Found T1w-to-template transforms 230102-10:50:15,152 nipype.workflow INFO: Freesurfer directory /out/sourcedata/freesurfer/sub-CAM003 exists for CAM003 INFO:nipype.workflow:Freesurfer directory /out/sourcedata/freesurfer/sub-CAM003 exists for CAM003 230102-10:50:15,196 nipype.workflow INFO: Anatomical (T1w) available for recon: {'has_qsiprep_5tt_fast': False, 'has_qsiprep_5tt_hsvs': False, 'has_freesurfer_5tt_hsvs': False, 'has_freesurfer': True, 'has_qsiprep_t1w': True, 'has_qsiprep_t1w_transforms': True} INFO:nipype.workflow:Anatomical (T1w) available for recon: {'has_qsiprep_5tt_fast': False, 'has_qsiprep_5tt_hsvs': False, 'has_freesurfer_5tt_hsvs': False, 'has_freesurfer': True, 'has_qsiprep_t1w': True, 'has_qsiprep_t1w_transforms': True} 230102-10:50:15,200 nipype.workflow INFO: Transforming ODF ROIs into DWI space for visual report. INFO:nipype.workflow:Transforming ODF ROIs into DWI space for visual report. 230102-10:50:15,267 nipype.interface INFO: Response configuration: {'algorithm': 'dhollander', 'nthreads': 8} INFO:nipype.interface:Response configuration: {'algorithm': 'dhollander', 'nthreads': 8} 230102-10:50:15,268 nipype.interface INFO: Using 8 threads in MRtrix3 INFO:nipype.interface:Using 8 threads in MRtrix3 230102-10:50:18,400 nipype.workflow IMPORTANT: Works derived from this qsiprep execution should include the following boilerplate: Reconstruction was performed using *QSIprep* 0.16.1, which is based on *Nipype* 1.8.5 (@nipype1; @nipype2; RRID:SCR_002502). QSIPrep-preprocessed T1w images and brain masks were used. MRtrix3 Reconstruction : Multi-tissue fiber response functions were estimated using the dhollander algorithm. FODs were estimated via constrained spherical deconvolution (CSD, @originalcsd, @tournier2008csd) using an unsupervised multi-tissue method (@dhollander2019response, @dhollander2016unsupervised). Reconstruction was done using MRtrix3 (@mrtrix3). FODs were intensity-normalized using mtnormalize (@mtnormalize). Many internal operations of *qsiprep* use *Nilearn* 0.9.2 [@nilearn, RRID:SCR_001362] and *Dipy* 1.5.0[@dipy]. For more details of the pipeline, see [the section corresponding to workflows in *qsiprep*'s documentation](https://qsiprep.readthedocs.io/en/latest/workflows.html "qsiprep's documentation"). ### References IMPORTANT:nipype.workflow:Works derived from this qsiprep execution should include the following boilerplate: Reconstruction was performed using *QSIprep* 0.16.1, which is based on *Nipype* 1.8.5 (@nipype1; @nipype2; RRID:SCR_002502). QSIPrep-preprocessed T1w images and brain masks were used. MRtrix3 Reconstruction : Multi-tissue fiber response functions were estimated using the dhollander algorithm. FODs were estimated via constrained spherical deconvolution (CSD, @originalcsd, @tournier2008csd) using an unsupervised multi-tissue method (@dhollander2019response, @dhollander2016unsupervised). Reconstruction was done using MRtrix3 (@mrtrix3). FODs were intensity-normalized using mtnormalize (@mtnormalize). Many internal operations of *qsiprep* use *Nilearn* 0.9.2 [@nilearn, RRID:SCR_001362] and *Dipy* 1.5.0[@dipy]. For more details of the pipeline, see [the section corresponding to workflows in *qsiprep*'s documentation](https://qsiprep.readthedocs.io/en/latest/workflows.html "qsiprep's documentation"). ### References [WARNING] This document format requires a nonempty <title> element. Please specify either 'title' or 'pagetitle' in the metadata. Falling back to 'CITATION' 230102-10:50:21,573 nipype.workflow INFO: Workflow qsirecon_wf settings: ['check', 'execution', 'logging', 'monitoring'] 230102-10:50:21,630 nipype.workflow INFO: Running in parallel. 230102-10:50:21,633 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 2 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:50:23,635 nipype.workflow INFO: [MultiProc] Running 2 tasks, and 0 jobs ready. Free memory (GB): 226.27/226.67, Free processors: 14/16. Currently running: * qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsiprep_preprocessed_dwi_data * qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.anat_ingress_wf.anat_ingress 230102-10:50:24,828 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.anat_ingress_wf.anat_ingress" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/anat_ingress_wf/anat_ingress". 230102-10:50:24,834 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsiprep_preprocessed_dwi_data" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsiprep_preprocessed_dwi_data". 230102-10:50:24,867 nipype.workflow INFO: [Node] Executing "qsiprep_preprocessed_dwi_data" <qsiprep.interfaces.bids.QsiReconIngress> 230102-10:50:24,868 nipype.workflow INFO: [Node] Executing "anat_ingress" <qsiprep.interfaces.anatomical.QsiprepAnatomicalIngress> 230102-10:50:24,894 nipype.workflow INFO: [Node] Finished "qsiprep_preprocessed_dwi_data", elapsed time 0.004407s. 230102-10:50:24,896 nipype.workflow INFO: [Node] Finished "anat_ingress", elapsed time 0.005883s. 230102-10:50:25,636 nipype.workflow INFO: [Job 0] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.anat_ingress_wf.anat_ingress). 230102-10:50:25,637 nipype.workflow INFO: [Job 1] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsiprep_preprocessed_dwi_data). 230102-10:50:25,638 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 4 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:50:25,795 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.get_atlases" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/get_atlases". 230102-10:50:25,844 nipype.workflow INFO: [Node] Executing "get_atlases" <qsiprep.interfaces.utils.GetConnectivityAtlases> 230102-10:50:25,860 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.resample_mask" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/resample_mask". 230102-10:50:25,896 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.odf_rois" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/odf_rois". 230102-10:50:28,478 nipype.workflow INFO: [Node] Executing "odf_rois" <nipype.interfaces.ants.resampling.ApplyTransforms> 230102-10:50:28,479 nipype.workflow INFO: [Node] Executing "resample_mask" <nipype.interfaces.afni.utils.Resample> 230102-10:50:32,125 nipype.workflow INFO: [Node] Finished "resample_mask", elapsed time 3.6207380000000002s. 230102-10:50:58,640 nipype.workflow INFO: [Node] Finished "odf_rois", elapsed time 29.933698s. labelconvert: Image "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/get_atlases/tpl-MNI152NLin2009cAsym_res-01_atlas-AICHA384Ext_desc-LPS_dseg_to_dwi.nii.gz" stored with floating-point type; need to check for non-integer or negative values labelconvert: uncompressing image "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/get_atlases/tpl-MNI152NLin2009cAsym_res-01_atlas-AICHA384Ext_desc-LPS_dseg_to_dwi.nii.gz"... [==================================================] labelconvert: Verifying parcellation image... [==================================================] labelconvert: uncompressing image "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/get_atlases/tpl-MNI152NLin2009cAsym_res-01_atlas-AICHA384Ext_desc-LPS_dseg_to_dwi.nii.gz"... [==================================================] labelconvert: Image "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/get_atlases/tpl-MNI152NLin2009cAsym_res-01_atlas-Gordon333Ext_desc-LPS_dseg_to_dwi.nii.gz" stored with floating-point type; need to check for non-integer or negative values labelconvert: uncompressing image "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/get_atlases/tpl-MNI152NLin2009cAsym_res-01_atlas-Gordon333Ext_desc-LPS_dseg_to_dwi.nii.gz"... [==================================================] labelconvert: Verifying parcellation image... [==================================================] labelconvert: uncompressing image "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/get_atlases/tpl-MNI152NLin2009cAsym_res-01_atlas-Gordon333Ext_desc-LPS_dseg_to_dwi.nii.gz"... [==================================================] labelconvert: Image "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/get_atlases/tpl-MNI152NLin2009cAsym_res-01_atlas-AAL116_desc-LPS_dseg_to_dwi.nii.gz" stored with floating-point type; need to check for non-integer or negative values labelconvert: uncompressing image "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/get_atlases/tpl-MNI152NLin2009cAsym_res-01_atlas-AAL116_desc-LPS_dseg_to_dwi.nii.gz"... [==================================================] labelconvert: Verifying parcellation image... [==================================================] labelconvert: uncompressing image "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/get_atlases/tpl-MNI152NLin2009cAsym_res-01_atlas-AAL116_desc-LPS_dseg_to_dwi.nii.gz"... [==================================================] labelconvert: Image "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/get_atlases/tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018Ext_desc-100Parcels7NetworksLPS_dseg_to_dwi.nii.gz" stored with floating-point type; need to check for non-integer or negative values labelconvert: uncompressing image "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/get_atlases/tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018Ext_desc-100Parcels7NetworksLPS_dseg_to_dwi.nii.gz"... [==================================================] labelconvert: Verifying parcellation image... [==================================================] labelconvert: uncompressing image "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/get_atlases/tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018Ext_desc-100Parcels7NetworksLPS_dseg_to_dwi.nii.gz"... [==================================================] labelconvert: Image "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/get_atlases/tpl-MNI152NLin2009cAsym_res-01_atlas-Brainnetome246Ext_desc-LPS_dseg_to_dwi.nii.gz" stored with floating-point type; need to check for non-integer or negative values labelconvert: uncompressing image "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/get_atlases/tpl-MNI152NLin2009cAsym_res-01_atlas-Brainnetome246Ext_desc-LPS_dseg_to_dwi.nii.gz"... [==================================================] labelconvert: Verifying parcellation image... [==================================================] labelconvert: uncompressing image "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/get_atlases/tpl-MNI152NLin2009cAsym_res-01_atlas-Brainnetome246Ext_desc-LPS_dseg_to_dwi.nii.gz"... [==================================================] labelconvert: Image "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/get_atlases/tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018Ext_desc-400Parcels7NetworksLPS_dseg_to_dwi.nii.gz" stored with floating-point type; need to check for non-integer or negative values labelconvert: uncompressing image "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/get_atlases/tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018Ext_desc-400Parcels7NetworksLPS_dseg_to_dwi.nii.gz"... [==================================================] labelconvert: Verifying parcellation image... [==================================================] labelconvert: uncompressing image "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/get_atlases/tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018Ext_desc-400Parcels7NetworksLPS_dseg_to_dwi.nii.gz"... [==================================================] labelconvert: Image "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/get_atlases/tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018Ext_desc-200Parcels7NetworksLPS_dseg_to_dwi.nii.gz" stored with floating-point type; need to check for non-integer or negative values labelconvert: uncompressing image "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/get_atlases/tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018Ext_desc-200Parcels7NetworksLPS_dseg_to_dwi.nii.gz"... [==================================================] labelconvert: Verifying parcellation image... [==================================================] labelconvert: uncompressing image "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/get_atlases/tpl-MNI152NLin2009cAsym_res-01_atlas-Schaefer2018Ext_desc-200Parcels7NetworksLPS_dseg_to_dwi.nii.gz"... [==================================================] 230102-10:54:11,544 nipype.workflow INFO: [Node] Finished "get_atlases", elapsed time 225.697567s. 230102-10:54:12,472 nipype.workflow INFO: [Job 4] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.get_atlases). 230102-10:54:12,626 nipype.workflow INFO: [Job 2] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.resample_mask). 230102-10:54:12,627 nipype.workflow INFO: [Job 3] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.odf_rois). 230102-10:54:12,629 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 28 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 15/16. Currently running: * qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.create_mif 230102-10:54:12,770 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_schaefer100" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_schaefer100". 230102-10:54:12,819 nipype.workflow INFO: [Node] Executing "dsatlas_schaefer100" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:12,843 nipype.workflow INFO: [Node] Finished "dsatlas_schaefer100", elapsed time 0.023404s. 230102-10:54:12,864 nipype.workflow INFO: [Job 6] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_schaefer100). 230102-10:54:13,10 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mifs_schaefer100" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_mifs_schaefer100". 230102-10:54:13,46 nipype.workflow INFO: [Node] Executing "dsatlas_mifs_schaefer100" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:13,670 nipype.workflow INFO: [Node] Finished "dsatlas_mifs_schaefer100", elapsed time 0.622969s. 230102-10:54:13,691 nipype.workflow INFO: [Job 7] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mifs_schaefer100). 230102-10:54:13,830 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mrtrix_lut_schaefer100" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_mrtrix_lut_schaefer100". 230102-10:54:13,866 nipype.workflow INFO: [Node] Executing "dsatlas_mrtrix_lut_schaefer100" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:13,880 nipype.workflow INFO: [Node] Finished "dsatlas_mrtrix_lut_schaefer100", elapsed time 0.013572s. 230102-10:54:13,901 nipype.workflow INFO: [Job 8] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mrtrix_lut_schaefer100). 230102-10:54:14,32 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_orig_lut_schaefer100" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_orig_lut_schaefer100". 230102-10:54:14,68 nipype.workflow INFO: [Node] Executing "dsatlas_orig_lut_schaefer100" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:14,83 nipype.workflow INFO: [Node] Finished "dsatlas_orig_lut_schaefer100", elapsed time 0.01364s. 230102-10:54:14,103 nipype.workflow INFO: [Job 9] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_orig_lut_schaefer100). 230102-10:54:14,226 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_schaefer200" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_schaefer200". 230102-10:54:14,260 nipype.workflow INFO: [Node] Executing "dsatlas_schaefer200" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:14,276 nipype.workflow INFO: [Node] Finished "dsatlas_schaefer200", elapsed time 0.014838s. 230102-10:54:14,296 nipype.workflow INFO: [Job 10] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_schaefer200). 230102-10:54:14,420 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mifs_schaefer200" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_mifs_schaefer200". 230102-10:54:14,454 nipype.workflow INFO: [Node] Executing "dsatlas_mifs_schaefer200" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:15,92 nipype.workflow INFO: [Node] Finished "dsatlas_mifs_schaefer200", elapsed time 0.637932s. 230102-10:54:15,118 nipype.workflow INFO: [Job 11] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mifs_schaefer200). 230102-10:54:15,243 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mrtrix_lut_schaefer200" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_mrtrix_lut_schaefer200". 230102-10:54:15,275 nipype.workflow INFO: [Node] Executing "dsatlas_mrtrix_lut_schaefer200" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:15,288 nipype.workflow INFO: [Node] Finished "dsatlas_mrtrix_lut_schaefer200", elapsed time 0.012358s. 230102-10:54:15,309 nipype.workflow INFO: [Job 12] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mrtrix_lut_schaefer200). 230102-10:54:15,418 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.create_mif" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/msmt_csd/create_mif". 230102-10:54:15,450 nipype.workflow INFO: [Node] Executing "create_mif" <qsiprep.interfaces.mrtrix.MRTrixIngress> 230102-10:54:15,450 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_orig_lut_schaefer200" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_orig_lut_schaefer200". 230102-10:54:15,486 nipype.workflow INFO: [Node] Executing "dsatlas_orig_lut_schaefer200" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:15,499 nipype.workflow INFO: [Node] Finished "dsatlas_orig_lut_schaefer200", elapsed time 0.012601s. 230102-10:54:15,519 nipype.workflow INFO: [Job 13] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_orig_lut_schaefer200). 230102-10:54:15,641 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_schaefer400" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_schaefer400". 230102-10:54:15,675 nipype.workflow INFO: [Node] Executing "dsatlas_schaefer400" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:15,689 nipype.workflow INFO: [Node] Finished "dsatlas_schaefer400", elapsed time 0.013877s. 230102-10:54:15,708 nipype.workflow INFO: [Job 14] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_schaefer400). 230102-10:54:15,828 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mifs_schaefer400" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_mifs_schaefer400". 230102-10:54:15,862 nipype.workflow INFO: [Node] Executing "dsatlas_mifs_schaefer400" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:16,440 nipype.workflow INFO: [Node] Finished "dsatlas_mifs_schaefer400", elapsed time 0.577804s. 230102-10:54:16,462 nipype.workflow INFO: [Job 15] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mifs_schaefer400). 230102-10:54:16,581 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mrtrix_lut_schaefer400" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_mrtrix_lut_schaefer400". 230102-10:54:16,618 nipype.workflow INFO: [Node] Executing "dsatlas_mrtrix_lut_schaefer400" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:16,632 nipype.workflow INFO: [Node] Finished "dsatlas_mrtrix_lut_schaefer400", elapsed time 0.013101s. 230102-10:54:16,652 nipype.workflow INFO: [Job 16] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mrtrix_lut_schaefer400). 230102-10:54:16,771 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_orig_lut_schaefer400" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_orig_lut_schaefer400". 230102-10:54:16,806 nipype.workflow INFO: [Node] Executing "dsatlas_orig_lut_schaefer400" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:16,820 nipype.workflow INFO: [Node] Finished "dsatlas_orig_lut_schaefer400", elapsed time 0.013679s. 230102-10:54:16,840 nipype.workflow INFO: [Job 17] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_orig_lut_schaefer400). 230102-10:54:16,959 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_brainnetome246" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_brainnetome246". 230102-10:54:16,992 nipype.workflow INFO: [Node] Executing "dsatlas_brainnetome246" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:17,6 nipype.workflow INFO: [Node] Finished "dsatlas_brainnetome246", elapsed time 0.013487s. 230102-10:54:17,26 nipype.workflow INFO: [Job 18] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_brainnetome246). 230102-10:54:17,145 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mifs_brainnetome246" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_mifs_brainnetome246". 230102-10:54:17,179 nipype.workflow INFO: [Node] Executing "dsatlas_mifs_brainnetome246" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:17,806 nipype.workflow INFO: [Node] Finished "dsatlas_mifs_brainnetome246", elapsed time 0.626361s. 230102-10:54:17,827 nipype.workflow INFO: [Job 19] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mifs_brainnetome246). 230102-10:54:17,947 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mrtrix_lut_brainnetome246" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_mrtrix_lut_brainnetome246". 230102-10:54:17,981 nipype.workflow INFO: [Node] Executing "dsatlas_mrtrix_lut_brainnetome246" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:17,994 nipype.workflow INFO: [Node] Finished "dsatlas_mrtrix_lut_brainnetome246", elapsed time 0.013076s. 230102-10:54:18,14 nipype.workflow INFO: [Job 20] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mrtrix_lut_brainnetome246). 230102-10:54:18,133 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_orig_lut_brainnetome246" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_orig_lut_brainnetome246". 230102-10:54:18,174 nipype.workflow INFO: [Node] Executing "dsatlas_orig_lut_brainnetome246" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:18,187 nipype.workflow INFO: [Node] Finished "dsatlas_orig_lut_brainnetome246", elapsed time 0.012693s. 230102-10:54:18,213 nipype.workflow INFO: [Job 21] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_orig_lut_brainnetome246). 230102-10:54:18,332 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_aicha384" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_aicha384". 230102-10:54:18,367 nipype.workflow INFO: [Node] Executing "dsatlas_aicha384" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:18,382 nipype.workflow INFO: [Node] Finished "dsatlas_aicha384", elapsed time 0.01432s. 230102-10:54:18,402 nipype.workflow INFO: [Job 22] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_aicha384). 230102-10:54:18,521 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mifs_aicha384" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_mifs_aicha384". 230102-10:54:18,557 nipype.workflow INFO: [Node] Executing "dsatlas_mifs_aicha384" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:19,135 nipype.workflow INFO: [Node] Finished "dsatlas_mifs_aicha384", elapsed time 0.577246s. 230102-10:54:19,156 nipype.workflow INFO: [Job 23] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mifs_aicha384). 230102-10:54:19,282 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mrtrix_lut_aicha384" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_mrtrix_lut_aicha384". 230102-10:54:19,317 nipype.workflow INFO: [Node] Executing "dsatlas_mrtrix_lut_aicha384" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:19,331 nipype.workflow INFO: [Node] Finished "dsatlas_mrtrix_lut_aicha384", elapsed time 0.013406s. 230102-10:54:19,352 nipype.workflow INFO: [Job 24] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mrtrix_lut_aicha384). 230102-10:54:19,471 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_orig_lut_aicha384" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_orig_lut_aicha384". 230102-10:54:19,504 nipype.workflow INFO: [Node] Executing "dsatlas_orig_lut_aicha384" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:19,519 nipype.workflow INFO: [Node] Finished "dsatlas_orig_lut_aicha384", elapsed time 0.013585s. 230102-10:54:19,541 nipype.workflow INFO: [Job 25] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_orig_lut_aicha384). 230102-10:54:19,660 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_gordon333" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_gordon333". 230102-10:54:19,693 nipype.workflow INFO: [Node] Executing "dsatlas_gordon333" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:19,709 nipype.workflow INFO: [Node] Finished "dsatlas_gordon333", elapsed time 0.014886s. 230102-10:54:19,729 nipype.workflow INFO: [Job 26] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_gordon333). 230102-10:54:19,848 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mifs_gordon333" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_mifs_gordon333". 230102-10:54:19,883 nipype.workflow INFO: [Node] Executing "dsatlas_mifs_gordon333" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:20,560 nipype.workflow INFO: [Node] Finished "dsatlas_mifs_gordon333", elapsed time 0.676573s. 230102-10:54:20,587 nipype.workflow INFO: [Job 27] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mifs_gordon333). 230102-10:54:20,706 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mrtrix_lut_gordon333" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_mrtrix_lut_gordon333". 230102-10:54:20,742 nipype.workflow INFO: [Node] Executing "dsatlas_mrtrix_lut_gordon333" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:20,756 nipype.workflow INFO: [Node] Finished "dsatlas_mrtrix_lut_gordon333", elapsed time 0.013301s. 230102-10:54:20,776 nipype.workflow INFO: [Job 28] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mrtrix_lut_gordon333). 230102-10:54:20,895 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_orig_lut_gordon333" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_orig_lut_gordon333". 230102-10:54:20,928 nipype.workflow INFO: [Node] Executing "dsatlas_orig_lut_gordon333" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:20,942 nipype.workflow INFO: [Node] Finished "dsatlas_orig_lut_gordon333", elapsed time 0.013158s. 230102-10:54:20,962 nipype.workflow INFO: [Job 29] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_orig_lut_gordon333). 230102-10:54:21,81 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_aal116" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_aal116". 230102-10:54:21,115 nipype.workflow INFO: [Node] Executing "dsatlas_aal116" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:21,130 nipype.workflow INFO: [Node] Finished "dsatlas_aal116", elapsed time 0.014145s. 230102-10:54:21,151 nipype.workflow INFO: [Job 30] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_aal116). 230102-10:54:21,270 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mifs_aal116" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_mifs_aal116". 230102-10:54:21,303 nipype.workflow INFO: [Node] Executing "dsatlas_mifs_aal116" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:21,768 nipype.workflow INFO: [Node] Finished "dsatlas_mifs_aal116", elapsed time 0.464595s. 230102-10:54:21,788 nipype.workflow INFO: [Job 31] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mifs_aal116). 230102-10:54:21,908 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mrtrix_lut_aal116" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_mrtrix_lut_aal116". 230102-10:54:21,940 nipype.workflow INFO: [Node] Executing "dsatlas_mrtrix_lut_aal116" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:21,954 nipype.workflow INFO: [Node] Finished "dsatlas_mrtrix_lut_aal116", elapsed time 0.012648s. 230102-10:54:21,972 nipype.workflow INFO: [Job 32] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_mrtrix_lut_aal116). 230102-10:54:22,91 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_orig_lut_aal116" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/qsirecon_anat_wf/dsatlas_orig_lut_aal116". 230102-10:54:22,125 nipype.workflow INFO: [Node] Executing "dsatlas_orig_lut_aal116" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:54:22,139 nipype.workflow INFO: [Node] Finished "dsatlas_orig_lut_aal116", elapsed time 0.012581s. 230102-10:54:22,157 nipype.workflow INFO: [Job 33] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.qsirecon_anat_wf.dsatlas_orig_lut_aal116). 230102-10:54:22,278 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 0 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 15/16. Currently running: * qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.create_mif 230102-10:54:26,144 nipype.interface INFO: stderr 2023-01-02T10:54:26.144176:[?7l mrconvert: [ 0%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 1%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 2%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 3%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 4%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 5%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 6%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 7%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 8%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 9%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 10%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 11%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 12%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 13%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 14%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 15%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 16%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 17%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 18%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 19%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 20%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 21%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 22%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 23%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 24%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 25%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 26%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 27%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 28%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 29%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 30%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 31%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 32%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 33%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 34%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 35%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 36%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 37%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 38%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 39%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 40%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 41%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 42%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 43%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 44%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 45%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 46%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 47%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 48%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 49%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 50%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 51%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 52%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 53%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 54%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 55%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 56%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 57%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 58%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 59%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 60%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 61%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 62%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 63%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 64%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 65%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 66%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 67%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 68%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 69%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 70%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 71%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 72%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 73%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 74%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 75%] uncompressing image "/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 76%] uncompressing image 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"/out/qsiprep/sub-CAM003/ses-01brain/dwi/sub-CAM003_ses-01brain_dir-AP_space-T1w_desc-preproc_dwi.nii.gz" 230102-10:54:40,849 nipype.interface INFO: stderr 2023-01-02T10:54:40.849806:[?7l mrconvert: [ 0%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 1%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 2%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 3%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 4%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 5%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 6%] copying from 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from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 67%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 68%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 69%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 70%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 71%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 72%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 73%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 74%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 75%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 76%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 77%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 78%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 79%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 80%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 81%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 82%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 83%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 84%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 85%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 86%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 87%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 88%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 89%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 90%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 91%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 92%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 93%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 94%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 95%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 96%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 97%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 98%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 99%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [100%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif"...[?7h mrconvert: [100%] copying from "/out/qsipr...T1w_desc-preproc_dwi.nii.gz" to "/work/qsir...ce-T1w_desc-preproc_dwi.mif" 230102-10:54:43,440 nipype.workflow INFO: [Node] Finished "create_mif", elapsed time 27.966419s. 230102-10:54:44,299 nipype.workflow INFO: [Job 5] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.create_mif). 230102-10:54:44,301 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 1 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:54:46,302 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 0 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 8/16. Currently running: * qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.estimate_response 230102-10:54:47,153 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.estimate_response" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/msmt_csd/estimate_response". 230102-10:54:47,191 nipype.workflow INFO: [Node] Executing "estimate_response" <qsiprep.interfaces.mrtrix.SS3TDwi2Response> 230102-10:55:42,136 nipype.workflow INFO: [Node] Finished "estimate_response", elapsed time 54.773264s. 230102-10:55:42,357 nipype.workflow INFO: [Job 34] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.estimate_response). 230102-10:55:42,359 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 4 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-10:55:42,496 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.ds_wm_txt" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/msmt_csd/ds_wm_txt". 230102-10:55:42,538 nipype.workflow INFO: [Node] Executing "ds_wm_txt" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:55:42,556 nipype.workflow INFO: [Node] Finished "ds_wm_txt", elapsed time 0.016511s. 230102-10:55:42,576 nipype.workflow INFO: [Job 36] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.ds_wm_txt). 230102-10:55:42,720 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.ds_gm_txt" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/msmt_csd/ds_gm_txt". 230102-10:55:42,752 nipype.workflow INFO: [Node] Executing "ds_gm_txt" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:55:42,766 nipype.workflow INFO: [Node] Finished "ds_gm_txt", elapsed time 0.012769s. 230102-10:55:42,785 nipype.workflow INFO: [Job 37] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.ds_gm_txt). 230102-10:55:42,920 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.ds_csf_txt" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/msmt_csd/ds_csf_txt". 230102-10:55:42,951 nipype.workflow INFO: [Node] Executing "ds_csf_txt" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-10:55:42,965 nipype.workflow INFO: [Node] Finished "ds_csf_txt", elapsed time 0.013359s. 230102-10:55:42,985 nipype.workflow INFO: [Job 38] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.ds_csf_txt). 230102-10:55:44,359 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 0 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 8/16. Currently running: * qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.estimate_fod 230102-10:55:45,25 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.estimate_fod" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/msmt_csd/estimate_fod". 230102-10:55:45,65 nipype.workflow INFO: [Node] Executing "estimate_fod" <qsiprep.interfaces.mrtrix.EstimateFOD> 230102-11:45:01,567 nipype.workflow INFO: [Node] Finished "estimate_fod", elapsed time 2956.348797s. 230102-11:45:03,106 nipype.workflow INFO: [Job 35] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.estimate_fod). 230102-11:45:03,108 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 1 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-11:45:05,109 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 0 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 8/16. Currently running: * qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.intensity_norm 230102-11:45:11,924 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.intensity_norm" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/msmt_csd/intensity_norm". 230102-11:45:11,980 nipype.workflow INFO: [Node] Executing "intensity_norm" <qsiprep.interfaces.mrtrix.MTNormalize> 230102-11:45:28,711 nipype.workflow INFO: [Node] Finished "intensity_norm", elapsed time 16.556945s. 230102-11:45:29,131 nipype.workflow INFO: [Job 39] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.intensity_norm). 230102-11:45:29,133 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 7 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-11:45:29,256 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.ds_mt_norm" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/msmt_csd/ds_mt_norm". 230102-11:45:29,306 nipype.workflow INFO: [Node] Executing "ds_mt_norm" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-11:45:29,380 nipype.workflow INFO: [Node] Finished "ds_mt_norm", elapsed time 0.072181s. 230102-11:45:29,401 nipype.workflow INFO: [Job 41] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.ds_mt_norm). 230102-11:45:29,553 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.ds_inlier_mask" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/msmt_csd/ds_inlier_mask". 230102-11:45:29,586 nipype.workflow INFO: [Node] Executing "ds_inlier_mask" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-11:45:29,602 nipype.workflow INFO: [Node] Finished "ds_inlier_mask", elapsed time 0.015081s. 230102-11:45:29,623 nipype.workflow INFO: [Job 42] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.ds_inlier_mask). 230102-11:45:29,764 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.ds_wm_odf" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/msmt_csd/ds_wm_odf". 230102-11:45:29,796 nipype.workflow INFO: [Node] Executing "ds_wm_odf" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-11:45:31,855 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.plot_peaks" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/msmt_csd/plot_peaks". 230102-11:45:31,903 nipype.workflow INFO: [Node] Executing "plot_peaks" <qsiprep.interfaces.reports.CLIReconPeaksReport> 230102-11:45:38,192 nipype.workflow INFO: [Node] Finished "ds_wm_odf", elapsed time 8.394684s. 230102-11:45:38,213 nipype.workflow INFO: [Job 43] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.ds_wm_odf). 230102-11:45:38,345 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.ds_gm_odf" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/msmt_csd/ds_gm_odf". 230102-11:45:38,380 nipype.workflow INFO: [Node] Executing "ds_gm_odf" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-11:45:44,776 nipype.workflow INFO: [Node] Finished "ds_gm_odf", elapsed time 6.395015s. 230102-11:45:44,798 nipype.workflow INFO: [Job 44] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.ds_gm_odf). 230102-11:45:44,928 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.ds_csf_odf" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/msmt_csd/ds_csf_odf". 230102-11:45:44,962 nipype.workflow INFO: [Node] Executing "ds_csf_odf" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-11:45:51,92 nipype.workflow INFO: [Node] Finished "ds_csf_odf", elapsed time 6.128707s. 230102-11:45:51,117 nipype.workflow INFO: [Job 45] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.ds_csf_odf). 230102-11:45:51,249 nipype.workflow INFO: [MultiProc] Running 2 tasks, and 0 jobs ready. Free memory (GB): 226.27/226.67, Free processors: 0/16. Currently running: * qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.track_ifod2.tractography * qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.plot_peaks 230102-11:45:53,690 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.track_ifod2.tractography" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/track_ifod2/tractography". 230102-11:45:53,740 nipype.workflow INFO: [Node] Executing "tractography" <qsiprep.interfaces.mrtrix.TckGen> 230102-11:48:22,227 nipype.workflow INFO: [Node] Finished "plot_peaks", elapsed time 170.187076s. 230102-11:48:23,409 nipype.workflow INFO: [Job 40] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.plot_peaks). 230102-11:48:23,411 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 2 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 8/16. Currently running: * qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.track_ifod2.tractography 230102-11:48:23,548 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.ds_report_peaks" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/msmt_csd/ds_report_peaks". 230102-11:48:23,589 nipype.workflow INFO: [Node] Executing "ds_report_peaks" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-11:48:23,607 nipype.workflow INFO: [Node] Finished "ds_report_peaks", elapsed time 0.017329s. 230102-11:48:23,626 nipype.workflow INFO: [Job 47] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.ds_report_peaks). 230102-11:48:23,764 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.ds_report_odfs" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/msmt_csd/ds_report_odfs". 230102-11:48:23,797 nipype.workflow INFO: [Node] Executing "ds_report_odfs" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-11:48:23,802 nipype.workflow INFO: [Node] Finished "ds_report_odfs", elapsed time 0.003967s. 230102-11:48:23,823 nipype.workflow INFO: [Job 48] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.msmt_csd.ds_report_odfs). 230102-11:48:25,411 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 0 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 8/16. Currently running: * qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.track_ifod2.tractography 230102-17:44:40,180 nipype.workflow INFO: [Node] Finished "tractography", elapsed time 21526.288988s. 230102-17:44:41,19 nipype.workflow INFO: [Job 46] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.track_ifod2.tractography). 230102-17:44:41,20 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 2 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-17:44:41,177 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.track_ifod2.ds_tck_file" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/track_ifod2/ds_tck_file". 230102-17:44:41,235 nipype.workflow INFO: [Node] Executing "ds_tck_file" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-17:44:49,891 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.track_ifod2.tck_sift2" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/track_ifod2/tck_sift2". 230102-17:44:50,374 nipype.workflow INFO: [Node] Executing "tck_sift2" <qsiprep.interfaces.mrtrix.SIFT2> 230102-17:45:16,466 nipype.workflow INFO: [Node] Finished "ds_tck_file", elapsed time 35.2298s. 230102-17:45:16,488 nipype.workflow INFO: [Job 50] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.track_ifod2.ds_tck_file). 230102-17:45:16,625 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 0 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 8/16. Currently running: * qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.track_ifod2.tck_sift2 230102-18:01:37,942 nipype.workflow INFO: [Node] Finished "tck_sift2", elapsed time 1007.392636s. 230102-18:01:39,613 nipype.workflow INFO: [Job 49] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.track_ifod2.tck_sift2). 230102-18:01:39,615 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 2 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-18:01:39,754 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.track_ifod2.ds_sift_weights" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/track_ifod2/ds_sift_weights". 230102-18:01:39,801 nipype.workflow INFO: [Node] Executing "ds_sift_weights" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-18:01:40,176 nipype.workflow INFO: [Node] Finished "ds_sift_weights", elapsed time 0.374029s. 230102-18:01:40,197 nipype.workflow INFO: [Job 51] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.track_ifod2.ds_sift_weights). 230102-18:01:41,615 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 0 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 8/16. Currently running: * qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.mrtrix_conn.calc_connectivity 230102-18:01:49,24 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.mrtrix_conn.calc_connectivity" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity". 230102-18:01:50,73 nipype.workflow INFO: [Node] Executing "calc_connectivity" <qsiprep.interfaces.mrtrix.MRTrixAtlasGraph> 230102-18:01:50,170 nipype.workflow INFO: Workflow mrtrix_atlasgraph settings: ['check', 'execution', 'logging', 'monitoring'] 230102-18:01:50,227 nipype.workflow INFO: Running in parallel. 230102-18:01:50,230 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:01:52,232 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.aicha384_sift_invnodevol_radius2_count 230102-18:01:53,427 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.aicha384_sift_invnodevol_radius2_count" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/aicha384_sift_invnodevol_radius2_count". 230102-18:01:53,713 nipype.workflow INFO: [Node] Executing "aicha384_sift_invnodevol_radius2_count" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:02:39,345 nipype.workflow INFO: [Node] Finished "aicha384_sift_invnodevol_radius2_count", elapsed time 45.419293s. 230102-18:02:40,282 nipype.workflow INFO: [Job 0] Completed (mrtrix_atlasgraph.aicha384_sift_invnodevol_radius2_count). 230102-18:02:40,284 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:02:42,285 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.aicha384_radius2_meanlength 230102-18:02:43,132 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.aicha384_radius2_meanlength" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/aicha384_radius2_meanlength". 230102-18:02:43,181 nipype.workflow INFO: [Node] Executing "aicha384_radius2_meanlength" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:03:22,2 nipype.workflow INFO: [Node] Finished "aicha384_radius2_meanlength", elapsed time 38.64978s. 230102-18:03:22,327 nipype.workflow INFO: [Job 1] Completed (mrtrix_atlasgraph.aicha384_radius2_meanlength). 230102-18:03:22,328 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:03:24,330 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.aicha384_radius2_count 230102-18:03:25,136 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.aicha384_radius2_count" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/aicha384_radius2_count". 230102-18:03:25,183 nipype.workflow INFO: [Node] Executing "aicha384_radius2_count" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:04:01,804 nipype.workflow INFO: [Node] Finished "aicha384_radius2_count", elapsed time 36.447748s. 230102-18:04:02,369 nipype.workflow INFO: [Job 2] Completed (mrtrix_atlasgraph.aicha384_radius2_count). 230102-18:04:02,370 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:04:04,372 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.aicha384_sift_radius2_count 230102-18:04:05,165 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.aicha384_sift_radius2_count" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/aicha384_sift_radius2_count". 230102-18:04:05,208 nipype.workflow INFO: [Node] Executing "aicha384_sift_radius2_count" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:04:50,789 nipype.workflow INFO: [Node] Finished "aicha384_sift_radius2_count", elapsed time 45.407212s. 230102-18:04:52,423 nipype.workflow INFO: [Job 3] Completed (mrtrix_atlasgraph.aicha384_sift_radius2_count). 230102-18:04:52,424 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:04:54,426 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.gordon333_sift_invnodevol_radius2_count 230102-18:04:55,269 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.gordon333_sift_invnodevol_radius2_count" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/gordon333_sift_invnodevol_radius2_count". 230102-18:04:55,505 nipype.workflow INFO: [Node] Executing "gordon333_sift_invnodevol_radius2_count" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:05:40,319 nipype.workflow INFO: [Node] Finished "gordon333_sift_invnodevol_radius2_count", elapsed time 44.62615s. 230102-18:05:40,475 nipype.workflow INFO: [Job 4] Completed (mrtrix_atlasgraph.gordon333_sift_invnodevol_radius2_count). 230102-18:05:40,476 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:05:42,478 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.gordon333_radius2_meanlength 230102-18:05:43,318 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.gordon333_radius2_meanlength" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/gordon333_radius2_meanlength". 230102-18:05:43,366 nipype.workflow INFO: [Node] Executing "gordon333_radius2_meanlength" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:06:23,675 nipype.workflow INFO: [Node] Finished "gordon333_radius2_meanlength", elapsed time 40.126444s. 230102-18:06:24,523 nipype.workflow INFO: [Job 5] Completed (mrtrix_atlasgraph.gordon333_radius2_meanlength). 230102-18:06:24,524 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:06:26,525 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.gordon333_radius2_count 230102-18:06:27,361 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.gordon333_radius2_count" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/gordon333_radius2_count". 230102-18:06:27,405 nipype.workflow INFO: [Node] Executing "gordon333_radius2_count" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:07:03,406 nipype.workflow INFO: [Node] Finished "gordon333_radius2_count", elapsed time 35.810811s. 230102-18:07:04,566 nipype.workflow INFO: [Job 6] Completed (mrtrix_atlasgraph.gordon333_radius2_count). 230102-18:07:04,568 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:07:06,569 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.gordon333_sift_radius2_count 230102-18:07:07,327 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.gordon333_sift_radius2_count" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/gordon333_sift_radius2_count". 230102-18:07:07,374 nipype.workflow INFO: [Node] Executing "gordon333_sift_radius2_count" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:07:52,527 nipype.workflow INFO: [Node] Finished "gordon333_sift_radius2_count", elapsed time 44.998444s. 230102-18:07:52,618 nipype.workflow INFO: [Job 7] Completed (mrtrix_atlasgraph.gordon333_sift_radius2_count). 230102-18:07:52,620 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:07:52,753 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.aal116_sift_invnodevol_radius2_count" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/aal116_sift_invnodevol_radius2_count". 230102-18:07:52,825 nipype.workflow INFO: [Node] Executing "aal116_sift_invnodevol_radius2_count" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:07:54,621 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.aal116_sift_invnodevol_radius2_count 230102-18:08:36,993 nipype.workflow INFO: [Node] Finished "aal116_sift_invnodevol_radius2_count", elapsed time 44.167246s. 230102-18:08:38,668 nipype.workflow INFO: [Job 8] Completed (mrtrix_atlasgraph.aal116_sift_invnodevol_radius2_count). 230102-18:08:38,670 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:08:38,809 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.aal116_radius2_meanlength" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/aal116_radius2_meanlength". 230102-18:08:38,842 nipype.workflow INFO: [Node] Executing "aal116_radius2_meanlength" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:08:40,671 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.aal116_radius2_meanlength 230102-18:09:17,344 nipype.workflow INFO: [Node] Finished "aal116_radius2_meanlength", elapsed time 38.500481s. 230102-18:09:18,712 nipype.workflow INFO: [Job 9] Completed (mrtrix_atlasgraph.aal116_radius2_meanlength). 230102-18:09:18,713 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:09:18,852 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.aal116_radius2_count" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/aal116_radius2_count". 230102-18:09:18,885 nipype.workflow INFO: [Node] Executing "aal116_radius2_count" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:09:20,715 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.aal116_radius2_count 230102-18:09:55,512 nipype.workflow INFO: [Node] Finished "aal116_radius2_count", elapsed time 36.625382s. 230102-18:09:56,753 nipype.workflow INFO: [Job 10] Completed (mrtrix_atlasgraph.aal116_radius2_count). 230102-18:09:56,755 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:09:56,894 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.aal116_sift_radius2_count" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/aal116_sift_radius2_count". 230102-18:09:56,928 nipype.workflow INFO: [Node] Executing "aal116_sift_radius2_count" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:09:58,756 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.aal116_sift_radius2_count 230102-18:10:40,708 nipype.workflow INFO: [Node] Finished "aal116_sift_radius2_count", elapsed time 43.779463s. 230102-18:10:40,800 nipype.workflow INFO: [Job 11] Completed (mrtrix_atlasgraph.aal116_sift_radius2_count). 230102-18:10:40,802 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:10:40,935 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer100_sift_invnodevol_radius2_count" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer100_sift_invnodevol_radius2_count". 230102-18:10:41,8 nipype.workflow INFO: [Node] Executing "schaefer100_sift_invnodevol_radius2_count" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:10:42,803 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer100_sift_invnodevol_radius2_count 230102-18:11:26,211 nipype.workflow INFO: [Node] Finished "schaefer100_sift_invnodevol_radius2_count", elapsed time 45.201896s. 230102-18:11:26,850 nipype.workflow INFO: [Job 12] Completed (mrtrix_atlasgraph.schaefer100_sift_invnodevol_radius2_count). 230102-18:11:26,851 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:11:26,984 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer100_radius2_meanlength" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer100_radius2_meanlength". 230102-18:11:27,15 nipype.workflow INFO: [Node] Executing "schaefer100_radius2_meanlength" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:11:28,853 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer100_radius2_meanlength 230102-18:12:06,231 nipype.workflow INFO: [Node] Finished "schaefer100_radius2_meanlength", elapsed time 39.214615s. 230102-18:12:06,893 nipype.workflow INFO: [Job 13] Completed (mrtrix_atlasgraph.schaefer100_radius2_meanlength). 230102-18:12:06,895 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:12:07,29 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer100_radius2_count" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer100_radius2_count". 230102-18:12:07,60 nipype.workflow INFO: [Node] Executing "schaefer100_radius2_count" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:12:08,897 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer100_radius2_count 230102-18:12:43,257 nipype.workflow INFO: [Node] Finished "schaefer100_radius2_count", elapsed time 36.195579s. 230102-18:12:44,934 nipype.workflow INFO: [Job 14] Completed (mrtrix_atlasgraph.schaefer100_radius2_count). 230102-18:12:44,935 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:12:45,75 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer100_sift_radius2_count" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer100_sift_radius2_count". 230102-18:12:45,106 nipype.workflow INFO: [Node] Executing "schaefer100_sift_radius2_count" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:12:46,936 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer100_sift_radius2_count 230102-18:13:29,924 nipype.workflow INFO: [Node] Finished "schaefer100_sift_radius2_count", elapsed time 44.816169s. 230102-18:13:30,983 nipype.workflow INFO: [Job 15] Completed (mrtrix_atlasgraph.schaefer100_sift_radius2_count). 230102-18:13:30,984 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:13:31,123 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.brainnetome246_sift_invnodevol_radius2_count" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/brainnetome246_sift_invnodevol_radius2_count". 230102-18:13:31,254 nipype.workflow INFO: [Node] Executing "brainnetome246_sift_invnodevol_radius2_count" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:13:32,986 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.brainnetome246_sift_invnodevol_radius2_count 230102-18:14:15,655 nipype.workflow INFO: [Node] Finished "brainnetome246_sift_invnodevol_radius2_count", elapsed time 44.400634s. 230102-18:14:17,32 nipype.workflow INFO: [Job 16] Completed (mrtrix_atlasgraph.brainnetome246_sift_invnodevol_radius2_count). 230102-18:14:17,33 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:14:17,171 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.brainnetome246_radius2_meanlength" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/brainnetome246_radius2_meanlength". 230102-18:14:17,204 nipype.workflow INFO: [Node] Executing "brainnetome246_radius2_meanlength" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:14:19,34 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.brainnetome246_radius2_meanlength 230102-18:14:55,978 nipype.workflow INFO: [Node] Finished "brainnetome246_radius2_meanlength", elapsed time 38.772258s. 230102-18:14:57,74 nipype.workflow INFO: [Job 17] Completed (mrtrix_atlasgraph.brainnetome246_radius2_meanlength). 230102-18:14:57,75 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:14:57,213 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.brainnetome246_radius2_count" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/brainnetome246_radius2_count". 230102-18:14:57,246 nipype.workflow INFO: [Node] Executing "brainnetome246_radius2_count" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:14:59,76 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.brainnetome246_radius2_count 230102-18:15:33,613 nipype.workflow INFO: [Node] Finished "brainnetome246_radius2_count", elapsed time 36.365844s. 230102-18:15:35,114 nipype.workflow INFO: [Job 18] Completed (mrtrix_atlasgraph.brainnetome246_radius2_count). 230102-18:15:35,115 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:15:35,243 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.brainnetome246_sift_radius2_count" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/brainnetome246_sift_radius2_count". 230102-18:15:35,277 nipype.workflow INFO: [Node] Executing "brainnetome246_sift_radius2_count" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:15:37,117 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.brainnetome246_sift_radius2_count 230102-18:16:22,361 nipype.workflow INFO: [Node] Finished "brainnetome246_sift_radius2_count", elapsed time 47.082844s. 230102-18:16:23,165 nipype.workflow INFO: [Job 19] Completed (mrtrix_atlasgraph.brainnetome246_sift_radius2_count). 230102-18:16:23,166 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:16:23,308 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer400_sift_invnodevol_radius2_count" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer400_sift_invnodevol_radius2_count". 230102-18:16:23,470 nipype.workflow INFO: [Node] Executing "schaefer400_sift_invnodevol_radius2_count" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:16:25,168 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer400_sift_invnodevol_radius2_count 230102-18:17:08,583 nipype.workflow INFO: [Node] Finished "schaefer400_sift_invnodevol_radius2_count", elapsed time 45.111227s. 230102-18:17:09,214 nipype.workflow INFO: [Job 20] Completed (mrtrix_atlasgraph.schaefer400_sift_invnodevol_radius2_count). 230102-18:17:09,216 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:17:09,358 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer400_radius2_meanlength" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer400_radius2_meanlength". 230102-18:17:09,394 nipype.workflow INFO: [Node] Executing "schaefer400_radius2_meanlength" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:17:11,217 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer400_radius2_meanlength 230102-18:17:48,357 nipype.workflow INFO: [Node] Finished "schaefer400_radius2_meanlength", elapsed time 38.962022s. 230102-18:17:49,257 nipype.workflow INFO: [Job 21] Completed (mrtrix_atlasgraph.schaefer400_radius2_meanlength). 230102-18:17:49,259 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:17:49,399 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer400_radius2_count" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer400_radius2_count". 230102-18:17:49,437 nipype.workflow INFO: [Node] Executing "schaefer400_radius2_count" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:17:51,260 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer400_radius2_count 230102-18:18:25,475 nipype.workflow INFO: [Node] Finished "schaefer400_radius2_count", elapsed time 36.037616s. 230102-18:18:27,298 nipype.workflow INFO: [Job 22] Completed (mrtrix_atlasgraph.schaefer400_radius2_count). 230102-18:18:27,300 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:18:27,441 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer400_sift_radius2_count" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer400_sift_radius2_count". 230102-18:18:27,480 nipype.workflow INFO: [Node] Executing "schaefer400_sift_radius2_count" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:18:29,301 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer400_sift_radius2_count 230102-18:19:12,6 nipype.workflow INFO: [Node] Finished "schaefer400_sift_radius2_count", elapsed time 44.52494s. 230102-18:19:13,349 nipype.workflow INFO: [Job 23] Completed (mrtrix_atlasgraph.schaefer400_sift_radius2_count). 230102-18:19:13,350 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:19:13,491 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer200_sift_invnodevol_radius2_count" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer200_sift_invnodevol_radius2_count". 230102-18:19:13,528 nipype.workflow INFO: [Node] Executing "schaefer200_sift_invnodevol_radius2_count" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:19:15,351 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer200_sift_invnodevol_radius2_count 230102-18:19:56,901 nipype.workflow INFO: [Node] Finished "schaefer200_sift_invnodevol_radius2_count", elapsed time 43.37116s. 230102-18:19:57,397 nipype.workflow INFO: [Job 24] Completed (mrtrix_atlasgraph.schaefer200_sift_invnodevol_radius2_count). 230102-18:19:57,398 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:19:57,532 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer200_radius2_meanlength" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer200_radius2_meanlength". 230102-18:19:57,564 nipype.workflow INFO: [Node] Executing "schaefer200_radius2_meanlength" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:19:59,399 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer200_radius2_meanlength 230102-18:20:36,45 nipype.workflow INFO: [Node] Finished "schaefer200_radius2_meanlength", elapsed time 38.480165s. 230102-18:20:37,440 nipype.workflow INFO: [Job 25] Completed (mrtrix_atlasgraph.schaefer200_radius2_meanlength). 230102-18:20:37,441 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:20:37,581 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer200_radius2_count" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer200_radius2_count". 230102-18:20:37,615 nipype.workflow INFO: [Node] Executing "schaefer200_radius2_count" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:20:39,443 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer200_radius2_count 230102-18:21:14,665 nipype.workflow INFO: [Node] Finished "schaefer200_radius2_count", elapsed time 37.049286s. 230102-18:21:15,481 nipype.workflow INFO: [Job 26] Completed (mrtrix_atlasgraph.schaefer200_radius2_count). 230102-18:21:15,482 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:21:15,621 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer200_sift_radius2_count" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer200_sift_radius2_count". 230102-18:21:15,652 nipype.workflow INFO: [Node] Executing "schaefer200_sift_radius2_count" <qsiprep.interfaces.mrtrix.BuildConnectome> 230102-18:21:17,483 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer200_sift_radius2_count 230102-18:22:00,450 nipype.workflow INFO: [Node] Finished "schaefer200_sift_radius2_count", elapsed time 44.796983s. 230102-18:22:01,531 nipype.workflow INFO: [Job 27] Completed (mrtrix_atlasgraph.schaefer200_sift_radius2_count). 230102-18:22:01,533 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 30 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:22:01,670 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.aicha384_sift_invnodevol_radius2_count_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/aicha384_sift_invnodevol_radius2_count_c2t". 230102-18:22:01,703 nipype.workflow INFO: [Node] Executing "aicha384_sift_invnodevol_radius2_count_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-18:22:03,534 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 29 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.aicha384_sift_invnodevol_radius2_count_c2t 230102-18:31:01,388 nipype.workflow INFO: [Node] Finished "aicha384_sift_invnodevol_radius2_count_c2t", elapsed time 539.683918s. 230102-18:31:02,116 nipype.workflow INFO: [Job 28] Completed (mrtrix_atlasgraph.aicha384_sift_invnodevol_radius2_count_c2t). 230102-18:31:02,117 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 29 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:31:02,256 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.aicha384_radius2_meanlength_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/aicha384_radius2_meanlength_c2t". 230102-18:31:02,295 nipype.workflow INFO: [Node] Executing "aicha384_radius2_meanlength_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-18:31:04,118 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 28 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.aicha384_radius2_meanlength_c2t 230102-18:40:07,145 nipype.workflow INFO: [Node] Finished "aicha384_radius2_meanlength_c2t", elapsed time 544.848177s. 230102-18:40:08,702 nipype.workflow INFO: [Job 29] Completed (mrtrix_atlasgraph.aicha384_radius2_meanlength_c2t). 230102-18:40:08,704 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 28 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:40:08,843 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.aicha384_radius2_count_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/aicha384_radius2_count_c2t". 230102-18:40:08,882 nipype.workflow INFO: [Node] Executing "aicha384_radius2_count_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-18:40:10,705 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 27 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.aicha384_radius2_count_c2t 230102-18:49:14,700 nipype.workflow INFO: [Node] Finished "aicha384_radius2_count_c2t", elapsed time 545.8164s. 230102-18:49:15,283 nipype.workflow INFO: [Job 30] Completed (mrtrix_atlasgraph.aicha384_radius2_count_c2t). 230102-18:49:15,285 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 27 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:49:15,425 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.aicha384_sift_radius2_count_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/aicha384_sift_radius2_count_c2t". 230102-18:49:15,466 nipype.workflow INFO: [Node] Executing "aicha384_sift_radius2_count_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-18:49:17,286 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 26 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.aicha384_sift_radius2_count_c2t 230102-18:58:19,675 nipype.workflow INFO: [Node] Finished "aicha384_sift_radius2_count_c2t", elapsed time 544.20815s. 230102-18:58:19,869 nipype.workflow INFO: [Job 31] Completed (mrtrix_atlasgraph.aicha384_sift_radius2_count_c2t). 230102-18:58:19,870 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 26 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-18:58:20,4 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.gordon333_sift_invnodevol_radius2_count_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/gordon333_sift_invnodevol_radius2_count_c2t". 230102-18:58:20,36 nipype.workflow INFO: [Node] Executing "gordon333_sift_invnodevol_radius2_count_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-18:58:21,871 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 25 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.gordon333_sift_invnodevol_radius2_count_c2t 230102-19:06:42,30 nipype.workflow INFO: [Node] Finished "gordon333_sift_invnodevol_radius2_count_c2t", elapsed time 501.993696s. 230102-19:06:42,407 nipype.workflow INFO: [Job 32] Completed (mrtrix_atlasgraph.gordon333_sift_invnodevol_radius2_count_c2t). 230102-19:06:42,409 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 25 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-19:06:42,541 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.gordon333_radius2_meanlength_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/gordon333_radius2_meanlength_c2t". 230102-19:06:42,572 nipype.workflow INFO: [Node] Executing "gordon333_radius2_meanlength_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-19:06:44,410 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 24 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.gordon333_radius2_meanlength_c2t 230102-19:15:03,626 nipype.workflow INFO: [Node] Finished "gordon333_radius2_meanlength_c2t", elapsed time 501.052602s. 230102-19:15:04,947 nipype.workflow INFO: [Job 33] Completed (mrtrix_atlasgraph.gordon333_radius2_meanlength_c2t). 230102-19:15:04,948 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 24 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-19:15:05,87 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.gordon333_radius2_count_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/gordon333_radius2_count_c2t". 230102-19:15:05,122 nipype.workflow INFO: [Node] Executing "gordon333_radius2_count_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-19:15:06,949 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 23 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.gordon333_radius2_count_c2t 230102-19:23:23,41 nipype.workflow INFO: [Node] Finished "gordon333_radius2_count_c2t", elapsed time 497.918211s. 230102-19:23:23,484 nipype.workflow INFO: [Job 34] Completed (mrtrix_atlasgraph.gordon333_radius2_count_c2t). 230102-19:23:23,486 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 23 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-19:23:23,619 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.gordon333_sift_radius2_count_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/gordon333_sift_radius2_count_c2t". 230102-19:23:23,663 nipype.workflow INFO: [Node] Executing "gordon333_sift_radius2_count_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-19:23:25,487 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 22 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.gordon333_sift_radius2_count_c2t 230102-19:31:24,838 nipype.workflow INFO: [Node] Finished "gordon333_sift_radius2_count_c2t", elapsed time 481.174015s. 230102-19:31:26,4 nipype.workflow INFO: [Job 35] Completed (mrtrix_atlasgraph.gordon333_sift_radius2_count_c2t). 230102-19:31:26,5 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 22 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-19:31:26,147 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.aal116_sift_invnodevol_radius2_count_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/aal116_sift_invnodevol_radius2_count_c2t". 230102-19:31:26,187 nipype.workflow INFO: [Node] Executing "aal116_sift_invnodevol_radius2_count_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-19:31:28,6 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 21 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.aal116_sift_invnodevol_radius2_count_c2t 230102-19:32:43,761 nipype.workflow INFO: [Node] Finished "aal116_sift_invnodevol_radius2_count_c2t", elapsed time 77.573277s. 230102-19:32:44,88 nipype.workflow INFO: [Job 36] Completed (mrtrix_atlasgraph.aal116_sift_invnodevol_radius2_count_c2t). 230102-19:32:44,89 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 21 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-19:32:44,229 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.aal116_radius2_meanlength_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/aal116_radius2_meanlength_c2t". 230102-19:32:44,267 nipype.workflow INFO: [Node] Executing "aal116_radius2_meanlength_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-19:32:46,91 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 20 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.aal116_radius2_meanlength_c2t 230102-19:34:00,116 nipype.workflow INFO: [Node] Finished "aal116_radius2_meanlength_c2t", elapsed time 75.847521s. 230102-19:34:00,170 nipype.workflow INFO: [Job 37] Completed (mrtrix_atlasgraph.aal116_radius2_meanlength_c2t). 230102-19:34:00,172 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 20 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-19:34:00,301 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.aal116_radius2_count_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/aal116_radius2_count_c2t". 230102-19:34:00,338 nipype.workflow INFO: [Node] Executing "aal116_radius2_count_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-19:34:02,173 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 19 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.aal116_radius2_count_c2t 230102-19:35:16,478 nipype.workflow INFO: [Node] Finished "aal116_radius2_count_c2t", elapsed time 76.138646s. 230102-19:35:18,253 nipype.workflow INFO: [Job 38] Completed (mrtrix_atlasgraph.aal116_radius2_count_c2t). 230102-19:35:18,255 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 19 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-19:35:18,395 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.aal116_sift_radius2_count_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/aal116_sift_radius2_count_c2t". 230102-19:35:18,433 nipype.workflow INFO: [Node] Executing "aal116_sift_radius2_count_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-19:35:20,256 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 18 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.aal116_sift_radius2_count_c2t 230102-19:36:35,35 nipype.workflow INFO: [Node] Finished "aal116_sift_radius2_count_c2t", elapsed time 76.6004s. 230102-19:36:36,336 nipype.workflow INFO: [Job 39] Completed (mrtrix_atlasgraph.aal116_sift_radius2_count_c2t). 230102-19:36:36,338 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 18 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-19:36:36,479 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer100_sift_invnodevol_radius2_count_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer100_sift_invnodevol_radius2_count_c2t". 230102-19:36:36,518 nipype.workflow INFO: [Node] Executing "schaefer100_sift_invnodevol_radius2_count_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-19:36:38,339 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 17 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer100_sift_invnodevol_radius2_count_c2t 230102-19:38:26,352 nipype.workflow INFO: [Node] Finished "schaefer100_sift_invnodevol_radius2_count_c2t", elapsed time 109.833618s. 230102-19:38:26,453 nipype.workflow INFO: [Job 40] Completed (mrtrix_atlasgraph.schaefer100_sift_invnodevol_radius2_count_c2t). 230102-19:38:26,455 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 17 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-19:38:26,587 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer100_radius2_meanlength_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer100_radius2_meanlength_c2t". 230102-19:38:26,627 nipype.workflow INFO: [Node] Executing "schaefer100_radius2_meanlength_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-19:38:28,456 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 16 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer100_radius2_meanlength_c2t 230102-19:40:15,653 nipype.workflow INFO: [Node] Finished "schaefer100_radius2_meanlength_c2t", elapsed time 109.025624s. 230102-19:40:16,572 nipype.workflow INFO: [Job 41] Completed (mrtrix_atlasgraph.schaefer100_radius2_meanlength_c2t). 230102-19:40:16,573 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 16 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-19:40:16,711 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer100_radius2_count_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer100_radius2_count_c2t". 230102-19:40:16,750 nipype.workflow INFO: [Node] Executing "schaefer100_radius2_count_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-19:40:18,574 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 15 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer100_radius2_count_c2t 230102-19:42:05,911 nipype.workflow INFO: [Node] Finished "schaefer100_radius2_count_c2t", elapsed time 109.159928s. 230102-19:42:06,689 nipype.workflow INFO: [Job 42] Completed (mrtrix_atlasgraph.schaefer100_radius2_count_c2t). 230102-19:42:06,690 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 15 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-19:42:06,829 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer100_sift_radius2_count_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer100_sift_radius2_count_c2t". 230102-19:42:06,868 nipype.workflow INFO: [Node] Executing "schaefer100_sift_radius2_count_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-19:42:08,691 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 14 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer100_sift_radius2_count_c2t 230102-19:43:55,468 nipype.workflow INFO: [Node] Finished "schaefer100_sift_radius2_count_c2t", elapsed time 108.598481s. 230102-19:43:56,807 nipype.workflow INFO: [Job 43] Completed (mrtrix_atlasgraph.schaefer100_sift_radius2_count_c2t). 230102-19:43:56,808 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 14 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-19:43:56,942 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.brainnetome246_sift_invnodevol_radius2_count_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/brainnetome246_sift_invnodevol_radius2_count_c2t". 230102-19:43:56,984 nipype.workflow INFO: [Node] Executing "brainnetome246_sift_invnodevol_radius2_count_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-19:43:58,809 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 13 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.brainnetome246_sift_invnodevol_radius2_count_c2t 230102-19:47:29,131 nipype.workflow INFO: [Node] Finished "brainnetome246_sift_invnodevol_radius2_count_c2t", elapsed time 212.146039s. 230102-19:47:31,36 nipype.workflow INFO: [Job 44] Completed (mrtrix_atlasgraph.brainnetome246_sift_invnodevol_radius2_count_c2t). 230102-19:47:31,37 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 13 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-19:47:31,176 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.brainnetome246_radius2_meanlength_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/brainnetome246_radius2_meanlength_c2t". 230102-19:47:31,213 nipype.workflow INFO: [Node] Executing "brainnetome246_radius2_meanlength_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-19:47:33,39 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 12 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.brainnetome246_radius2_meanlength_c2t 230102-19:51:03,449 nipype.workflow INFO: [Node] Finished "brainnetome246_radius2_meanlength_c2t", elapsed time 212.235533s. 230102-19:51:05,266 nipype.workflow INFO: [Job 45] Completed (mrtrix_atlasgraph.brainnetome246_radius2_meanlength_c2t). 230102-19:51:05,267 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 12 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-19:51:05,400 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.brainnetome246_radius2_count_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/brainnetome246_radius2_count_c2t". 230102-19:51:05,442 nipype.workflow INFO: [Node] Executing "brainnetome246_radius2_count_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-19:51:07,269 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 11 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.brainnetome246_radius2_count_c2t 230102-19:54:36,911 nipype.workflow INFO: [Node] Finished "brainnetome246_radius2_count_c2t", elapsed time 211.468004s. 230102-19:54:37,495 nipype.workflow INFO: [Job 46] Completed (mrtrix_atlasgraph.brainnetome246_radius2_count_c2t). 230102-19:54:37,497 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 11 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-19:54:37,630 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.brainnetome246_sift_radius2_count_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/brainnetome246_sift_radius2_count_c2t". 230102-19:54:37,668 nipype.workflow INFO: [Node] Executing "brainnetome246_sift_radius2_count_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-19:54:39,498 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 10 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.brainnetome246_sift_radius2_count_c2t 230102-19:58:10,153 nipype.workflow INFO: [Node] Finished "brainnetome246_sift_radius2_count_c2t", elapsed time 212.484476s. 230102-19:58:11,724 nipype.workflow INFO: [Job 47] Completed (mrtrix_atlasgraph.brainnetome246_sift_radius2_count_c2t). 230102-19:58:11,726 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 10 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-19:58:11,861 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer400_sift_invnodevol_radius2_count_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer400_sift_invnodevol_radius2_count_c2t". 230102-19:58:11,904 nipype.workflow INFO: [Node] Executing "schaefer400_sift_invnodevol_radius2_count_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-19:58:13,727 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 9 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer400_sift_invnodevol_radius2_count_c2t 230102-20:11:49,148 nipype.workflow INFO: [Node] Finished "schaefer400_sift_invnodevol_radius2_count_c2t", elapsed time 817.243225s. 230102-20:11:50,603 nipype.workflow INFO: [Job 48] Completed (mrtrix_atlasgraph.schaefer400_sift_invnodevol_radius2_count_c2t). 230102-20:11:50,605 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 9 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-20:11:50,737 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer400_radius2_meanlength_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer400_radius2_meanlength_c2t". 230102-20:11:50,774 nipype.workflow INFO: [Node] Executing "schaefer400_radius2_meanlength_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-20:11:52,606 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 8 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer400_radius2_meanlength_c2t 230102-20:25:32,567 nipype.workflow INFO: [Node] Finished "schaefer400_radius2_meanlength_c2t", elapsed time 821.791667s. 230102-20:25:33,489 nipype.workflow INFO: [Job 49] Completed (mrtrix_atlasgraph.schaefer400_radius2_meanlength_c2t). 230102-20:25:33,491 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 8 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-20:25:33,623 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer400_radius2_count_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer400_radius2_count_c2t". 230102-20:25:33,662 nipype.workflow INFO: [Node] Executing "schaefer400_radius2_count_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-20:25:35,492 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 7 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer400_radius2_count_c2t 230102-20:37:12,823 nipype.workflow INFO: [Node] Finished "schaefer400_radius2_count_c2t", elapsed time 699.160291s. 230102-20:37:14,245 nipype.workflow INFO: [Job 50] Completed (mrtrix_atlasgraph.schaefer400_radius2_count_c2t). 230102-20:37:14,247 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 7 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-20:37:14,386 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer400_sift_radius2_count_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer400_sift_radius2_count_c2t". 230102-20:37:14,426 nipype.workflow INFO: [Node] Executing "schaefer400_sift_radius2_count_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-20:37:16,248 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 6 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer400_sift_radius2_count_c2t 230102-20:50:54,476 nipype.workflow INFO: [Node] Finished "schaefer400_sift_radius2_count_c2t", elapsed time 820.048501s. 230102-20:50:55,133 nipype.workflow INFO: [Job 51] Completed (mrtrix_atlasgraph.schaefer400_sift_radius2_count_c2t). 230102-20:50:55,134 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 6 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-20:50:55,274 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer200_sift_invnodevol_radius2_count_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer200_sift_invnodevol_radius2_count_c2t". 230102-20:50:55,313 nipype.workflow INFO: [Node] Executing "schaefer200_sift_invnodevol_radius2_count_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-20:50:57,136 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 5 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer200_sift_invnodevol_radius2_count_c2t 230102-20:55:55,608 nipype.workflow INFO: [Node] Finished "schaefer200_sift_invnodevol_radius2_count_c2t", elapsed time 300.293874s. 230102-20:55:57,460 nipype.workflow INFO: [Job 52] Completed (mrtrix_atlasgraph.schaefer200_sift_invnodevol_radius2_count_c2t). 230102-20:55:57,462 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 5 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-20:55:57,601 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer200_radius2_meanlength_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer200_radius2_meanlength_c2t". 230102-20:55:57,641 nipype.workflow INFO: [Node] Executing "schaefer200_radius2_meanlength_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-20:55:59,463 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 4 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer200_radius2_meanlength_c2t 230102-21:00:56,611 nipype.workflow INFO: [Node] Finished "schaefer200_radius2_meanlength_c2t", elapsed time 298.969023s. 230102-21:00:57,785 nipype.workflow INFO: [Job 53] Completed (mrtrix_atlasgraph.schaefer200_radius2_meanlength_c2t). 230102-21:00:57,786 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 4 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-21:00:57,926 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer200_radius2_count_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer200_radius2_count_c2t". 230102-21:00:57,965 nipype.workflow INFO: [Node] Executing "schaefer200_radius2_count_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-21:00:59,787 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 3 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer200_radius2_count_c2t 230102-21:04:49,938 nipype.workflow INFO: [Node] Finished "schaefer200_radius2_count_c2t", elapsed time 231.972135s. 230102-21:04:50,35 nipype.workflow INFO: [Job 54] Completed (mrtrix_atlasgraph.schaefer200_radius2_count_c2t). 230102-21:04:50,37 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 3 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-21:04:50,170 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.schaefer200_sift_radius2_count_c2t" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/schaefer200_sift_radius2_count_c2t". 230102-21:04:50,208 nipype.workflow INFO: [Node] Executing "schaefer200_sift_radius2_count_c2t" <qsiprep.interfaces.mrtrix.Connectome2Tck> 230102-21:04:52,38 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 2 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 0/8. Currently running: * mrtrix_atlasgraph.schaefer200_sift_radius2_count_c2t 230102-21:09:48,385 nipype.workflow INFO: [Node] Finished "schaefer200_sift_radius2_count_c2t", elapsed time 298.175481s. 230102-21:09:50,357 nipype.workflow INFO: [Job 55] Completed (mrtrix_atlasgraph.schaefer200_sift_radius2_count_c2t). 230102-21:09:50,359 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 4 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-21:09:50,491 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.merge_mats" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/merge_mats". 230102-21:09:50,493 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.merge_csvs" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/merge_csvs". 230102-21:09:50,494 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.merge_tcks" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/merge_tcks". 230102-21:09:50,496 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.merge_weights" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/merge_weights". 230102-21:09:50,653 nipype.workflow INFO: [Node] Executing "merge_csvs" <nipype.interfaces.utility.base.Merge> 230102-21:09:50,655 nipype.workflow INFO: [Node] Finished "merge_csvs", elapsed time 0.000419s. 230102-21:09:50,655 nipype.workflow INFO: [Node] Executing "merge_mats" <nipype.interfaces.utility.base.Merge> 230102-21:09:50,657 nipype.workflow INFO: [Node] Finished "merge_mats", elapsed time 0.000354s. 230102-21:09:50,676 nipype.workflow INFO: [Node] Executing "merge_weights" <nipype.interfaces.utility.base.Merge> 230102-21:09:50,678 nipype.workflow INFO: [Node] Finished "merge_weights", elapsed time 0.000401s. 230102-21:09:50,678 nipype.workflow INFO: [Node] Executing "merge_tcks" <nipype.interfaces.utility.base.Merge> 230102-21:09:50,679 nipype.workflow INFO: [Node] Finished "merge_tcks", elapsed time 0.000387s. 230102-21:09:52,359 nipype.workflow INFO: [Job 56] Completed (mrtrix_atlasgraph.merge_mats). 230102-21:09:52,360 nipype.workflow INFO: [Job 57] Completed (mrtrix_atlasgraph.merge_csvs). 230102-21:09:52,361 nipype.workflow INFO: [Job 58] Completed (mrtrix_atlasgraph.merge_tcks). 230102-21:09:52,362 nipype.workflow INFO: [Job 59] Completed (mrtrix_atlasgraph.merge_weights). 230102-21:09:52,363 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 1 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-21:09:52,501 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.merge_exemplars" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/merge_exemplars". 230102-21:09:52,547 nipype.workflow INFO: [Node] Executing "merge_exemplars" <nipype.interfaces.utility.base.Merge> 230102-21:09:52,548 nipype.workflow INFO: [Node] Finished "merge_exemplars", elapsed time 0.000384s. 230102-21:09:54,361 nipype.workflow INFO: [Job 60] Completed (mrtrix_atlasgraph.merge_exemplars). 230102-21:09:54,363 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 1 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-21:09:54,493 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.compress_exemplars" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/compress_exemplars". 230102-21:09:54,546 nipype.workflow INFO: [Node] Executing "compress_exemplars" <qsiprep.interfaces.mrtrix.CompressConnectome2Tck> 230102-21:09:56,364 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 0 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 7/8. Currently running: * mrtrix_atlasgraph.compress_exemplars 230102-21:10:49,195 nipype.workflow INFO: [Node] Finished "compress_exemplars", elapsed time 54.647607s. 230102-21:10:50,420 nipype.workflow INFO: [Job 61] Completed (mrtrix_atlasgraph.compress_exemplars). 230102-21:10:50,421 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 0 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 8/8. 230102-21:10:53,192 nipype.workflow INFO: [Node] Setting-up "mrtrix_atlasgraph.compress_exemplars" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/calc_connectivity/mrtrix_atlasgraph/compress_exemplars". 230102-21:10:53,221 nipype.workflow INFO: [Node] Cached "mrtrix_atlasgraph.compress_exemplars" - collecting precomputed outputs 230102-21:10:53,221 nipype.workflow INFO: [Node] "mrtrix_atlasgraph.compress_exemplars" found cached. 230102-21:10:53,225 nipype.workflow INFO: [Node] Finished "calc_connectivity", elapsed time 11343.125702s. 230102-21:10:55,75 nipype.workflow INFO: [Job 52] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.mrtrix_conn.calc_connectivity). 230102-21:10:55,77 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 3 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-21:10:55,211 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.mrtrix_conn.ds_mrtrix_conn" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/ds_mrtrix_conn". 230102-21:10:55,262 nipype.workflow INFO: [Node] Executing "ds_mrtrix_conn" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-21:10:55,293 nipype.workflow INFO: [Node] Finished "ds_mrtrix_conn", elapsed time 0.030891s. 230102-21:10:55,311 nipype.workflow INFO: [Job 54] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.mrtrix_conn.ds_mrtrix_conn). 230102-21:10:55,452 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.mrtrix_conn.ds_exemplars" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/ds_exemplars". 230102-21:10:55,485 nipype.workflow INFO: [Node] Executing "ds_exemplars" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-21:10:58,230 nipype.workflow INFO: [Node] Finished "ds_exemplars", elapsed time 2.743897s. 230102-21:10:58,250 nipype.workflow INFO: [Job 55] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.mrtrix_conn.ds_exemplars). 230102-21:10:58,374 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 0 jobs ready. Free memory (GB): 226.47/226.67, Free processors: 8/16. Currently running: * qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.mrtrix_conn.plot_connectivity 230102-21:11:03,862 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.mrtrix_conn.plot_connectivity" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/plot_connectivity". 230102-21:11:03,909 nipype.workflow INFO: [Node] Executing "plot_connectivity" <qsiprep.interfaces.reports.ConnectivityReport> 230102-21:11:04,836 nipype.workflow INFO: [Node] Finished "plot_connectivity", elapsed time 0.90376s. 230102-21:11:06,382 nipype.workflow INFO: [Job 53] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.mrtrix_conn.plot_connectivity). 230102-21:11:06,383 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 1 jobs ready. Free memory (GB): 226.67/226.67, Free processors: 16/16. 230102-21:11:06,517 nipype.workflow INFO: [Node] Setting-up "qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.mrtrix_conn.ds_report_connectivity" in "/work/qsirecon_wf/sub-CAM003_mrtrix_multishell_msmt_noACT/sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf/mrtrix_conn/ds_report_connectivity". 230102-21:11:06,554 nipype.workflow INFO: [Node] Executing "ds_report_connectivity" <qsiprep.interfaces.bids.ReconDerivativesDataSink> 230102-21:11:06,566 nipype.workflow INFO: [Node] Finished "ds_report_connectivity", elapsed time 0.011882s. 230102-21:11:06,588 nipype.workflow INFO: [Job 56] Completed (qsirecon_wf.sub-CAM003_mrtrix_multishell_msmt_noACT.sub_CAM003_ses_01brain_dir_AP_space_T1w_desc_preproc_recon_wf.mrtrix_conn.ds_report_connectivity). INFO: Cleanup error: while unmounting /var/apptainer/mnt/session/underlay/usr directory: device or resource busy, while unmounting /var/apptainer/mnt/session/underlay/lib directory: device or resource busy, while unmounting /var/apptainer/mnt/session/final directory: device or resource busy Detailed performance metrics for this job will be available at https://metrics.hpc.arizona.edu/#job_viewer?action=show&realm=SUPREMM&resource_id=4&local_job_id=568102 by 8am on 2023/01/03.