array id: 14 subject id: sub-261269 250927-08:25:25,339 nipype.workflow IMPORTANT: Running QSIRecon version 1.1.2.dev0+gfa8673957.d20250819 License NOTICE ################################################## QSIRecon 1.1.2.dev0+gfa8673957.d20250819 Copyright The PennLINC Developers. This product includes software developed by the NiPreps Community (https://nipreps.org/). Portions of this software were developed at the Department of Psychology at Stanford University, Stanford, CA, US. This software is also distributed as a Docker container image. The bootstrapping file for the image ("Dockerfile") is licensed under the MIT License. This software may be distributed through an add-on package called "Docker Wrapper" that is under the BSD 3-clause License. ################################################################# 250927-08:25:25,452 nipype.workflow IMPORTANT: Building QSIRecon's workflow: * BIDS dataset path: /data. * Participant list: ['261269']. * Run identifier: 20250927-082509_f8a066a4-6136-4fee-982f-f3d3e2c9e6c7. * Pre-run FreeSurfer's SUBJECTS_DIR: /output/derivatives/freesurfer. 250927-08:25:33,502 nipype.utils INFO: Collected anatomical data: acpc_aparc: null acpc_aseg: /data/sub-261269/anat/sub-261269_space-ACPC_desc-aseg_dseg.nii.gz acpc_brain_mask: /data/sub-261269/anat/sub-261269_space-ACPC_desc-brain_mask.nii.gz acpc_csf_probseg: null acpc_gm_probseg: null acpc_preproc: /data/sub-261269/anat/sub-261269_space-ACPC_desc-preproc_T1w.nii.gz acpc_seg: /data/sub-261269/anat/sub-261269_space-ACPC_dseg.nii.gz acpc_to_template_xfm: /data/sub-261269/anat/sub-261269_from-ACPC_to-MNI152NLin2009cAsym_mode-image_xfm.h5 acpc_wm_probseg: null orig_to_acpc_xfm: null template_to_acpc_xfm: /data/sub-261269/anat/sub-261269_from-MNI152NLin2009cAsym_to-ACPC_mode-image_xfm.h5 250927-08:25:33,503 nipype.workflow INFO: Anatomical data available for /data/sub-261269/anat/sub-261269_space-ACPC_desc-preproc_T1w.nii.gz: acpc_aparc: null acpc_aseg: /data/sub-261269/anat/sub-261269_space-ACPC_desc-aseg_dseg.nii.gz acpc_brain_mask: /data/sub-261269/anat/sub-261269_space-ACPC_desc-brain_mask.nii.gz acpc_csf_probseg: null acpc_gm_probseg: null acpc_preproc: /data/sub-261269/anat/sub-261269_space-ACPC_desc-preproc_T1w.nii.gz acpc_seg: /data/sub-261269/anat/sub-261269_space-ACPC_dseg.nii.gz acpc_to_template_xfm: /data/sub-261269/anat/sub-261269_from-ACPC_to-MNI152NLin2009cAsym_mode-image_xfm.h5 acpc_wm_probseg: null orig_to_acpc_xfm: null template_to_acpc_xfm: /data/sub-261269/anat/sub-261269_from-MNI152NLin2009cAsym_to-ACPC_mode-image_xfm.h5 250927-08:25:33,507 nipype.workflow INFO: Found high-res anatomical data in preprocessed inputs for 261269. 250927-08:25:33,507 nipype.workflow INFO: Freesurfer directory /output/derivatives/freesurfer/sub-261269 exists for 261269 250927-08:25:33,507 nipype.workflow INFO: acpc_aparc (): None () 250927-08:25:33,507 nipype.workflow INFO: acpc_seg (): /data/sub-261269/anat/sub-261269_space-ACPC_dseg.nii.gz () 250927-08:25:33,508 nipype.workflow INFO: acpc_aseg (): /data/sub-261269/anat/sub-261269_space-ACPC_desc-aseg_dseg.nii.gz () 250927-08:25:33,508 nipype.workflow INFO: acpc_brain_mask (): /data/sub-261269/anat/sub-261269_space-ACPC_desc-brain_mask.nii.gz () 250927-08:25:33,508 nipype.workflow INFO: acpc_preproc (): /data/sub-261269/anat/sub-261269_space-ACPC_desc-preproc_T1w.nii.gz () 250927-08:25:33,508 nipype.workflow INFO: acpc_csf_probseg (): None () 250927-08:25:33,508 nipype.workflow INFO: acpc_gm_probseg (): None () 250927-08:25:33,508 nipype.workflow INFO: acpc_wm_probseg (): None () 250927-08:25:33,508 nipype.workflow INFO: orig_to_acpc_xfm (): None () 250927-08:25:33,508 nipype.workflow INFO: template_to_acpc_xfm (): /data/sub-261269/anat/sub-261269_from-MNI152NLin2009cAsym_to-ACPC_mode-image_xfm.h5 () 250927-08:25:33,508 nipype.workflow INFO: acpc_to_template_xfm (): /data/sub-261269/anat/sub-261269_from-ACPC_to-MNI152NLin2009cAsym_mode-image_xfm.h5 () 250927-08:25:33,508 nipype.workflow INFO: Found 1 high-res anatomicals to process 250927-08:25:33,515 nipype.workflow INFO: Transforming ODF ROIs into DWI space for visual report. 250927-08:25:33,520 nipype.workflow INFO: skipping ODF plots for msmt_csd 250927-08:25:33,521 nipype.interface INFO: Response configuration: {'algorithm': 'dhollander', 'nthreads': 8} 250927-08:25:33,521 nipype.interface INFO: Using 8 threads in MRtrix3 250927-08:25:33,532 nipype.workflow INFO: skipping ODF plots for track_ifod2 250927-08:25:33,537 nipype.workflow INFO: skipping ODF plots for pyafq_tractometry 250927-08:25:37,884 nipype.workflow INFO: QSIRecon workflow graph with 53 nodes built successfully. 250927-08:25:52,133 nipype.workflow IMPORTANT: QSIRecon started! 250927-08:25:55,882 nipype.workflow INFO: [Node] Setting-up "qsirecon_1_1_wf.sub-261269_mrtrix_multishell_msmt_pyafq_tractometry.sub_261269_space_ACPC_desc_preproc_ingressed_dwi_data" in "/work/qsirecon_1_1_wf/sub-261269_mrtrix_multishell_msmt_pyafq_tractometry/sub_261269_space_ACPC_desc_preproc_ingressed_dwi_data". 250927-08:25:56,33 nipype.workflow INFO: [Node] Executing "sub_261269_space_ACPC_desc_preproc_ingressed_dwi_data" 250927-08:25:56,41 nipype.workflow INFO: [Node] Finished "sub_261269_space_ACPC_desc_preproc_ingressed_dwi_data", elapsed time 0.002877s. 250927-08:25:56,305 nipype.workflow INFO: [Node] Setting-up "qsirecon_1_1_wf.sub-261269_mrtrix_multishell_msmt_pyafq_tractometry.sub_261269_space_ACPC_desc_preproc_dwi_specific_anat_wf.get_template" in "/work/qsirecon_1_1_wf/sub-261269_mrtrix_multishell_msmt_pyafq_tractometry/sub_261269_space_ACPC_desc_preproc_dwi_specific_anat_wf/get_template". 250927-08:25:56,337 nipype.workflow INFO: [Node] Executing "get_template" 250927-08:25:56,363 nipype.workflow INFO: [Node] Finished "get_template", elapsed time 0.021919s. 250927-08:25:56,437 nipype.workflow INFO: [Node] Setting-up "qsirecon_1_1_wf.sub-261269_mrtrix_multishell_msmt_pyafq_tractometry.sub_261269_space_ACPC_desc_preproc_dwi_specific_anat_wf.resample_mask" in "/work/qsirecon_1_1_wf/sub-261269_mrtrix_multishell_msmt_pyafq_tractometry/sub_261269_space_ACPC_desc_preproc_dwi_specific_anat_wf/resample_mask". 250927-08:25:56,439 nipype.workflow INFO: [Node] Setting-up "qsirecon_1_1_wf.sub-261269_mrtrix_multishell_msmt_pyafq_tractometry.sub_261269_space_ACPC_desc_preproc_dwi_specific_anat_wf.odf_rois" in "/work/qsirecon_1_1_wf/sub-261269_mrtrix_multishell_msmt_pyafq_tractometry/sub_261269_space_ACPC_desc_preproc_dwi_specific_anat_wf/odf_rois". 250927-08:25:56,473 nipype.workflow INFO: [Node] Executing "resample_mask" 250927-08:25:56,479 nipype.workflow INFO: [Node] Executing "odf_rois" 250927-08:25:58,721 nipype.workflow INFO: [Node] Finished "resample_mask", elapsed time 1.116331s. 250927-08:25:58,837 nipype.workflow INFO: [Node] Setting-up "qsirecon_1_1_wf.sub-261269_mrtrix_multishell_msmt_pyafq_tractometry.sub_261269_space_ACPC_desc_preproc_dwi_specific_anat_wf.output_grid_wf.voxel_size_chooser" in "/work/qsirecon_1_1_wf/sub-261269_mrtrix_multishell_msmt_pyafq_tractometry/sub_261269_space_ACPC_desc_preproc_dwi_specific_anat_wf/output_grid_wf/voxel_size_chooser". 250927-08:25:58,941 nipype.workflow INFO: [Node] Executing "voxel_size_chooser" 250927-08:25:58,943 nipype.workflow INFO: [Node] Finished "voxel_size_chooser", elapsed time 9.7e-05s. 250927-08:25:59,834 nipype.workflow INFO: [Node] Setting-up "qsirecon_1_1_wf.sub-261269_mrtrix_multishell_msmt_pyafq_tractometry.sub_261269_space_ACPC_desc_preproc_dwi_specific_anat_wf.mask_template" in "/work/qsirecon_1_1_wf/sub-261269_mrtrix_multishell_msmt_pyafq_tractometry/sub_261269_space_ACPC_desc_preproc_dwi_specific_anat_wf/mask_template". 250927-08:26:00,634 nipype.interface WARNING: Changing /output/sub-261269/dwi/sub-261269_space-ACPC_desc-brain_mask.nii.gz dtype from float64 to float64 250927-08:26:01,163 nipype.workflow INFO: [Node] Executing "mask_template" 250927-08:26:03,337 nipype.workflow INFO: [Node] Finished "mask_template", elapsed time 2.167768s. 250927-08:26:04,430 nipype.workflow INFO: [Node] Setting-up "qsirecon_1_1_wf.sub-261269_mrtrix_multishell_msmt_pyafq_tractometry.sub_261269_space_ACPC_desc_preproc_dwi_specific_anat_wf.reorient_to_lps" in "/work/qsirecon_1_1_wf/sub-261269_mrtrix_multishell_msmt_pyafq_tractometry/sub_261269_space_ACPC_desc_preproc_dwi_specific_anat_wf/reorient_to_lps". 250927-08:26:04,460 nipype.workflow INFO: [Node] Executing "reorient_to_lps" 250927-08:26:05,109 nipype.workflow INFO: [Node] Finished "reorient_to_lps", elapsed time 0.648237s. 250927-08:26:06,399 nipype.workflow INFO: [Node] Setting-up "qsirecon_1_1_wf.sub-261269_mrtrix_multishell_msmt_pyafq_tractometry.sub_261269_space_ACPC_desc_preproc_dwi_specific_anat_wf.output_grid_wf.autobox_template" in "/work/qsirecon_1_1_wf/sub-261269_mrtrix_multishell_msmt_pyafq_tractometry/sub_261269_space_ACPC_desc_preproc_dwi_specific_anat_wf/output_grid_wf/autobox_template". 250927-08:26:06,454 nipype.workflow INFO: [Node] Executing "autobox_template" 250927-08:26:07,97 nipype.workflow INFO: [Node] Finished "autobox_template", elapsed time 0.643037s. 250927-08:26:08,402 nipype.workflow INFO: [Node] Setting-up "qsirecon_1_1_wf.sub-261269_mrtrix_multishell_msmt_pyafq_tractometry.sub_261269_space_ACPC_desc_preproc_dwi_specific_anat_wf.output_grid_wf.deoblique_autobox" in "/work/qsirecon_1_1_wf/sub-261269_mrtrix_multishell_msmt_pyafq_tractometry/sub_261269_space_ACPC_desc_preproc_dwi_specific_anat_wf/output_grid_wf/deoblique_autobox". 250927-08:26:08,580 nipype.workflow INFO: [Node] Executing "deoblique_autobox" 250927-08:26:09,830 nipype.workflow INFO: [Node] Finished "deoblique_autobox", elapsed time 1.2494830000000001s. 250927-08:26:10,403 nipype.workflow INFO: [Node] Setting-up "qsirecon_1_1_wf.sub-261269_mrtrix_multishell_msmt_pyafq_tractometry.sub_261269_space_ACPC_desc_preproc_dwi_specific_anat_wf.output_grid_wf.resample_to_voxel_size" in "/work/qsirecon_1_1_wf/sub-261269_mrtrix_multishell_msmt_pyafq_tractometry/sub_261269_space_ACPC_desc_preproc_dwi_specific_anat_wf/output_grid_wf/resample_to_voxel_size". 250927-08:26:10,485 nipype.workflow INFO: [Node] Executing "resample_to_voxel_size" 250927-08:26:10,882 nipype.workflow INFO: [Node] Finished "resample_to_voxel_size", elapsed time 0.396558s. 250927-08:26:49,780 nipype.workflow INFO: [Node] Finished "odf_rois", elapsed time 52.17193s. 250927-08:26:50,479 nipype.workflow INFO: [Node] Setting-up "qsirecon_1_1_wf.sub-261269_mrtrix_multishell_msmt_pyafq_tractometry.sub_261269_space_ACPC_desc_preproc_recon_inputs" in "/work/qsirecon_1_1_wf/sub-261269_mrtrix_multishell_msmt_pyafq_tractometry/sub_261269_space_ACPC_desc_preproc_recon_inputs". 250927-08:26:50,958 nipype.workflow INFO: [Node] Executing "sub_261269_space_ACPC_desc_preproc_recon_inputs" 250927-08:26:50,961 nipype.workflow INFO: [Node] Finished "sub_261269_space_ACPC_desc_preproc_recon_inputs", elapsed time 0.000356s. 250927-08:26:52,453 nipype.workflow INFO: [Node] Setting-up "qsirecon_1_1_wf.sub-261269_mrtrix_multishell_msmt_pyafq_tractometry.sub_261269_space_ACPC_desc_preproc_recon_wf.msmt_csd.create_mif" in "/work/qsirecon_1_1_wf/sub-261269_mrtrix_multishell_msmt_pyafq_tractometry/sub_261269_space_ACPC_desc_preproc_recon_wf/msmt_csd/create_mif". 250927-08:26:52,533 nipype.workflow INFO: [Node] Executing "create_mif" 250927-08:27:03,391 nipype.interface INFO: stderr 2025-09-27T08:27:03.391304:[?7l mrconvert: [ 0%] uncompressing image "/data/sub-261269/dwi/sub-261269_space-ACPC_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 1%] uncompressing image "/data/sub-261269/dwi/sub-261269_space-ACPC_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 2%] uncompressing image "/data/sub-261269/dwi/sub-261269_space-ACPC_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 3%] uncompressing image "/data/sub-261269/dwi/sub-261269_space-ACPC_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 4%] uncompressing image "/data/sub-261269/dwi/sub-261269_space-ACPC_desc-preproc_dwi.nii.gz"...[?7h[?7l mrconvert: [ 5%] uncompressing image "/data/sub-261269/dwi/sub-261269_space-ACPC_desc-preproc_dwi.nii.gz"...[?7h[?7l 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from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 1%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 2%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 3%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 4%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 5%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 6%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 7%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to 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"/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 53%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 54%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 55%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 56%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 57%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 58%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 59%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 60%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 61%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 62%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 63%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 64%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 65%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 66%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 67%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 68%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 69%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 70%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 71%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 72%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 73%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 74%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 75%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 76%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 77%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 78%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 79%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 80%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 81%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 82%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 83%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 84%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 85%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 86%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 87%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 88%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 89%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 90%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 91%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 92%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 93%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 94%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 95%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 96%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 97%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 98%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [ 99%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h[?7l mrconvert: [100%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif"...[?7h mrconvert: [100%] copying from "/data/sub-...CPC_desc-preproc_dwi.nii.gz" to "/work/qsir...e-ACPC_desc-preproc_dwi.mif" 250927-08:27:55,701 nipype.workflow INFO: [Node] Finished "create_mif", elapsed time 63.165804s. 250927-08:27:56,523 nipype.workflow INFO: [Node] Setting-up "qsirecon_1_1_wf.sub-261269_mrtrix_multishell_msmt_pyafq_tractometry.sub_261269_space_ACPC_desc_preproc_recon_wf.msmt_csd.estimate_response" in "/work/qsirecon_1_1_wf/sub-261269_mrtrix_multishell_msmt_pyafq_tractometry/sub_261269_space_ACPC_desc_preproc_recon_wf/msmt_csd/estimate_response". 250927-08:27:56,730 nipype.workflow INFO: [Node] Executing "estimate_response" 250927-08:32:48,182 nipype.workflow INFO: [Node] Finished "estimate_response", elapsed time 291.386228s. 250927-08:32:48,819 nipype.workflow INFO: [Node] Setting-up "qsirecon_1_1_wf.sub-261269_mrtrix_multishell_msmt_pyafq_tractometry.sub_261269_space_ACPC_desc_preproc_recon_wf.msmt_csd.estimate_fod" in "/work/qsirecon_1_1_wf/sub-261269_mrtrix_multishell_msmt_pyafq_tractometry/sub_261269_space_ACPC_desc_preproc_recon_wf/msmt_csd/estimate_fod". 250927-08:32:48,854 nipype.workflow INFO: [Node] Executing "estimate_fod" 250927-09:51:52,614 nipype.workflow INFO: [Node] Finished "estimate_fod", elapsed time 4743.674195s. 250927-09:51:53,482 nipype.workflow INFO: [Node] Setting-up "qsirecon_1_1_wf.sub-261269_mrtrix_multishell_msmt_pyafq_tractometry.sub_261269_space_ACPC_desc_preproc_recon_wf.msmt_csd.intensity_norm" in "/work/qsirecon_1_1_wf/sub-261269_mrtrix_multishell_msmt_pyafq_tractometry/sub_261269_space_ACPC_desc_preproc_recon_wf/msmt_csd/intensity_norm". 250927-09:51:53,546 nipype.workflow INFO: [Node] Executing "intensity_norm" 250927-09:53:29,654 nipype.workflow INFO: [Node] Finished "intensity_norm", elapsed time 96.105826s. 250927-09:54:08,123 nipype.workflow INFO: [Node] Setting-up "qsirecon_1_1_wf.sub-261269_mrtrix_multishell_msmt_pyafq_tractometry.sub_261269_space_ACPC_desc_preproc_recon_wf.track_ifod2.tractography" in "/work/qsirecon_1_1_wf/sub-261269_mrtrix_multishell_msmt_pyafq_tractometry/sub_261269_space_ACPC_desc_preproc_recon_wf/track_ifod2/tractography". 250927-09:54:08,164 nipype.workflow INFO: [Node] Executing "tractography" 250927-10:29:29,682 nipype.workflow INFO: [Node] Finished "tractography", elapsed time 2121.515279s. 250927-10:29:30,238 nipype.workflow INFO: [Node] Setting-up "qsirecon_1_1_wf.sub-261269_mrtrix_multishell_msmt_pyafq_tractometry.sub_261269_space_ACPC_desc_preproc_recon_wf.track_ifod2.tck_sift2" in "/work/qsirecon_1_1_wf/sub-261269_mrtrix_multishell_msmt_pyafq_tractometry/sub_261269_space_ACPC_desc_preproc_recon_wf/track_ifod2/tck_sift2". 250927-10:29:30,283 nipype.workflow INFO: [Node] Executing "tck_sift2" 250927-10:31:51,840 nipype.workflow INFO: [Node] Setting-up "qsirecon_1_1_wf.sub-261269_mrtrix_multishell_msmt_pyafq_tractometry.sub_261269_space_ACPC_desc_preproc_recon_wf.pyafq_tractometry.run_afq" in "/work/qsirecon_1_1_wf/sub-261269_mrtrix_multishell_msmt_pyafq_tractometry/sub_261269_space_ACPC_desc_preproc_recon_wf/pyafq_tractometry/run_afq". 250927-10:31:51,903 nipype.workflow INFO: [Node] Executing "run_afq" 250927-10:32:06,28 nipype.workflow INFO: [Node] Finished "run_afq", elapsed time 14.092814s. 250927-10:32:06,28 nipype.workflow WARNING: Storing result file without outputs 250927-10:32:06,35 nipype.workflow WARNING: [Node] Error on "qsirecon_1_1_wf.sub-261269_mrtrix_multishell_msmt_pyafq_tractometry.sub_261269_space_ACPC_desc_preproc_recon_wf.pyafq_tractometry.run_afq" (/work/qsirecon_1_1_wf/sub-261269_mrtrix_multishell_msmt_pyafq_tractometry/sub_261269_space_ACPC_desc_preproc_recon_wf/pyafq_tractometry/run_afq) 250927-10:32:07,968 nipype.workflow ERROR: Node run_afq failed to run on host cn1563.hw.accre.vu. 250927-10:32:07,978 nipype.workflow ERROR: Saving crash info to /output/sub-261269/log/20250927-082509_f8a066a4-6136-4fee-982f-f3d3e2c9e6c7/crash-20250927-103207-harrioem-run_afq-57d9e903-4b78-482c-9b55-4c7963dcba77.txt Traceback (most recent call last): File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/nipype/pipeline/plugins/multiproc.py", line 66, in run_node result["result"] = node.run(updatehash=updatehash) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/nipype/pipeline/engine/nodes.py", line 525, in run result = self._run_interface(execute=True) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/nipype/pipeline/engine/nodes.py", line 643, in _run_interface return self._run_command(execute) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/nipype/pipeline/engine/nodes.py", line 769, in _run_command raise NodeExecutionError(msg) nipype.pipeline.engine.nodes.NodeExecutionError: Exception raised while executing Node run_afq. Traceback: Traceback (most recent call last): File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/AFQ/tasks/data.py", line 340, in csd_params csdf = csd_fit_model( File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/AFQ/models/csd.py", line 67, in _fit return _model(gtab, data, response, sh_order, csd_fa_thr).fit( File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/AFQ/models/csd.py", line 56, in _model raise CsdNanResponseError AFQ.models.csd.CsdNanResponseError The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/nipype/interfaces/base/core.py", line 401, in run runtime = self._run_interface(runtime) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/qsirecon/interfaces/pyafq.py", line 114, in _run_interface myafq.export_all() File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/AFQ/api/participant.py", line 201, in export_all export_all_helper(self, xforms, indiv, viz) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/AFQ/api/utils.py", line 121, in export_all_helper api_afq_object.export("template_xform") File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/AFQ/api/participant.py", line 155, in export return self.wf_dict[section][attr_name] File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 470, in __getitem__ self._run_node(self.plan.efferents[k]) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 534, in _run_node if not found: res = node(self) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 90, in __call__ args.append(opts[name]) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 889, in __getitem__ return self._examine_val(k, ps.PMap.__getitem__(self, k)) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 885, in _examine_val val = val() File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 1164, in def curry_choice(k, args): return lambda:choose_fn(k, args) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 1133, in _choose_last return vs[-1][k] File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 470, in __getitem__ self._run_node(self.plan.efferents[k]) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 534, in _run_node if not found: res = node(self) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 90, in __call__ args.append(opts[name]) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 889, in __getitem__ return self._examine_val(k, ps.PMap.__getitem__(self, k)) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 885, in _examine_val val = val() File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 1164, in def curry_choice(k, args): return lambda:choose_fn(k, args) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 1133, in _choose_last return vs[-1][k] File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 470, in __getitem__ self._run_node(self.plan.efferents[k]) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 534, in _run_node if not found: res = node(self) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 91, in __call__ result = self.function(*args) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/AFQ/tasks/mapping.py", line 212, in get_reg_subject reg_subject_spec = data_imap[filename_dict[reg_subject_spec]] File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 470, in __getitem__ self._run_node(self.plan.efferents[k]) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 534, in _run_node if not found: res = node(self) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 90, in __call__ args.append(opts[name]) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 889, in __getitem__ return self._examine_val(k, ps.PMap.__getitem__(self, k)) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 885, in _examine_val val = val() File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 1164, in def curry_choice(k, args): return lambda:choose_fn(k, args) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 1133, in _choose_last return vs[-1][k] File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 470, in __getitem__ self._run_node(self.plan.efferents[k]) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 534, in _run_node if not found: res = node(self) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 91, in __call__ result = self.function(*args) File "", line 2, in wrapper_has_args_func File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/AFQ/tasks/decorators.py", line 146, in wrapper_as_file gen, meta = func(*args[:og_arg_count], **kwargs) File "", line 2, in wrapper_has_args_func File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/AFQ/tasks/decorators.py", line 216, in wrapper_as_img data, meta = func(*args[:og_arg_count], **kwargs) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/AFQ/tasks/data.py", line 347, in csd_params raise CsdNanResponseError( AFQ.models.csd.CsdNanResponseError: Could not compute CSD response function for file: data shape (161, 197, 171, 99) affine: [[ -1. 0. 0. 80.] [ 0. -1. 0. 81.] [ 0. 0. 1. -80.] [ 0. 0. 0. 1.]] metadata: object, endian='<' sizeof_hdr : 348 data_type : b'' db_name : b'' extents : 0 session_error : 0 regular : b'' dim_info : 0 dim : [ 4 161 197 171 99 1 1 1] intent_p1 : 0.0 intent_p2 : 0.0 intent_p3 : 0.0 intent_code : none datatype : float64 bitpix : 64 slice_start : 0 pixdim : [1. 1. 1. 1. 1. 1. 1. 1.] vox_offset : 0.0 scl_slope : nan scl_inter : nan slice_end : 0 slice_code : unknown xyzt_units : 0 cal_max : 0.0 cal_min : 0.0 slice_duration : 0.0 toffset : 0.0 glmax : 0 glmin : 0 descrip : b'' aux_file : b'' qform_code : unknown sform_code : aligned quatern_b : 0.0 quatern_c : 0.0 quatern_d : 1.0 qoffset_x : 80.0 qoffset_y : 81.0 qoffset_z : -80.0 srow_x : [-1. 0. 0. 80.] srow_y : [ 0. -1. 0. 81.] srow_z : [ 0. 0. 1. -80.] intent_name : b'' magic : b'n+1' . 250927-10:33:11,601 nipype.workflow INFO: [Node] Finished "tck_sift2", elapsed time 221.315984s. 250927-10:33:14,22 nipype.workflow ERROR: could not run node: qsirecon_1_1_wf.sub-261269_mrtrix_multishell_msmt_pyafq_tractometry.sub_261269_space_ACPC_desc_preproc_recon_wf.pyafq_tractometry.run_afq 250927-10:33:14,74 nipype.workflow CRITICAL: QSIRecon failed: Traceback (most recent call last): File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/nipype/pipeline/plugins/multiproc.py", line 66, in run_node result["result"] = node.run(updatehash=updatehash) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/nipype/pipeline/engine/nodes.py", line 525, in run result = self._run_interface(execute=True) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/nipype/pipeline/engine/nodes.py", line 643, in _run_interface return self._run_command(execute) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/nipype/pipeline/engine/nodes.py", line 769, in _run_command raise NodeExecutionError(msg) nipype.pipeline.engine.nodes.NodeExecutionError: Exception raised while executing Node run_afq. Traceback: Traceback (most recent call last): File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/AFQ/tasks/data.py", line 340, in csd_params csdf = csd_fit_model( File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/AFQ/models/csd.py", line 67, in _fit return _model(gtab, data, response, sh_order, csd_fa_thr).fit( File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/AFQ/models/csd.py", line 56, in _model raise CsdNanResponseError AFQ.models.csd.CsdNanResponseError The above exception was the direct cause of the following exception: Traceback (most recent call last): File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/nipype/interfaces/base/core.py", line 401, in run runtime = self._run_interface(runtime) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/qsirecon/interfaces/pyafq.py", line 114, in _run_interface myafq.export_all() File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/AFQ/api/participant.py", line 201, in export_all export_all_helper(self, xforms, indiv, viz) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/AFQ/api/utils.py", line 121, in export_all_helper api_afq_object.export("template_xform") File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/AFQ/api/participant.py", line 155, in export return self.wf_dict[section][attr_name] File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 470, in __getitem__ self._run_node(self.plan.efferents[k]) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 534, in _run_node if not found: res = node(self) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 90, in __call__ args.append(opts[name]) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 889, in __getitem__ return self._examine_val(k, ps.PMap.__getitem__(self, k)) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 885, in _examine_val val = val() File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 1164, in def curry_choice(k, args): return lambda:choose_fn(k, args) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 1133, in _choose_last return vs[-1][k] File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 470, in __getitem__ self._run_node(self.plan.efferents[k]) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 534, in _run_node if not found: res = node(self) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 90, in __call__ args.append(opts[name]) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 889, in __getitem__ return self._examine_val(k, ps.PMap.__getitem__(self, k)) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 885, in _examine_val val = val() File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 1164, in def curry_choice(k, args): return lambda:choose_fn(k, args) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 1133, in _choose_last return vs[-1][k] File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 470, in __getitem__ self._run_node(self.plan.efferents[k]) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 534, in _run_node if not found: res = node(self) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 91, in __call__ result = self.function(*args) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/AFQ/tasks/mapping.py", line 212, in get_reg_subject reg_subject_spec = data_imap[filename_dict[reg_subject_spec]] File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 470, in __getitem__ self._run_node(self.plan.efferents[k]) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 534, in _run_node if not found: res = node(self) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 90, in __call__ args.append(opts[name]) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 889, in __getitem__ return self._examine_val(k, ps.PMap.__getitem__(self, k)) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 885, in _examine_val val = val() File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 1164, in def curry_choice(k, args): return lambda:choose_fn(k, args) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/util.py", line 1133, in _choose_last return vs[-1][k] File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 470, in __getitem__ self._run_node(self.plan.efferents[k]) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 534, in _run_node if not found: res = node(self) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/pimms/calculation.py", line 91, in __call__ result = self.function(*args) File "", line 2, in wrapper_has_args_func File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/AFQ/tasks/decorators.py", line 146, in wrapper_as_file gen, meta = func(*args[:og_arg_count], **kwargs) File "", line 2, in wrapper_has_args_func File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/AFQ/tasks/decorators.py", line 216, in wrapper_as_img data, meta = func(*args[:og_arg_count], **kwargs) File "/opt/conda/envs/qsiprep/lib/python3.10/site-packages/AFQ/tasks/data.py", line 347, in csd_params raise CsdNanResponseError( AFQ.models.csd.CsdNanResponseError: Could not compute CSD response function for file: data shape (161, 197, 171, 99) affine: [[ -1. 0. 0. 80.] [ 0. -1. 0. 81.] [ 0. 0. 1. -80.] [ 0. 0. 0. 1.]] metadata: object, endian='<' sizeof_hdr : 348 data_type : b'' db_name : b'' extents : 0 session_error : 0 regular : b'' dim_info : 0 dim : [ 4 161 197 171 99 1 1 1] intent_p1 : 0.0 intent_p2 : 0.0 intent_p3 : 0.0 intent_code : none datatype : float64 bitpix : 64 slice_start : 0 pixdim : [1. 1. 1. 1. 1. 1. 1. 1.] vox_offset : 0.0 scl_slope : nan scl_inter : nan slice_end : 0 slice_code : unknown xyzt_units : 0 cal_max : 0.0 cal_min : 0.0 slice_duration : 0.0 toffset : 0.0 glmax : 0 glmin : 0 descrip : b'' aux_file : b'' qform_code : unknown sform_code : aligned quatern_b : 0.0 quatern_c : 0.0 quatern_d : 1.0 qoffset_x : 80.0 qoffset_y : 81.0 qoffset_z : -80.0 srow_x : [-1. 0. 0. 80.] srow_y : [ 0. -1. 0. 81.] srow_z : [ 0. 0. 1. -80.] intent_name : b'' magic : b'n+1' . 250927-10:33:14,88 nipype.utils WARNING: DatasetType key not in /data/dataset_description.json. Assuming 'derivative'. 250927-10:33:15,213 nipype.utils WARNING: DatasetType key not in /data/dataset_description.json. Assuming 'derivative'. 250927-10:33:16,655 nipype.utils WARNING: DatasetType key not in /data/dataset_description.json. Assuming 'derivative'.