Node: fmriprep_wf.single_subject_28_wf.func_preproc_ses_01_task_PSAP_wf.bold_std_trans_wf.bold_to_std_transform Working directory: /tmp/work/fmriprep_wf/single_subject_28_wf/func_preproc_ses_01_task_PSAP_wf/bold_std_trans_wf/_std_target_MNI152NLin2009cAsym./bold_to_std_transform Node inputs: args = copy_dtype = True default_value = 0.0 dimension = environ = {} float = True input_image = input_image_type = interpolation = LanczosWindowedSinc interpolation_parameters = invert_transform_flags = num_threads = 3 out_postfix = _trans output_image = print_out_composite_warp_file = reference_image = save_cmd = True transforms = Traceback (most recent call last): File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node result["result"] = node.run(updatehash=updatehash) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run result = self._run_interface(execute=True) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 635, in _run_interface return self._run_command(execute) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 741, in _run_command result = self._interface.run(cwd=outdir) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/interfaces/base/core.py", line 428, in run runtime = self._run_interface(runtime) File "/usr/local/miniconda/lib/python3.7/site-packages/niworkflows/interfaces/itk.py", line 172, in _run_interface zip(in_files, xfms_list) File "/usr/local/miniconda/lib/python3.7/concurrent/futures/_base.py", line 586, in result_iterator yield fs.pop().result() File "/usr/local/miniconda/lib/python3.7/concurrent/futures/_base.py", line 425, in result return self.__get_result() File "/usr/local/miniconda/lib/python3.7/concurrent/futures/_base.py", line 384, in __get_result raise self._exception File "/usr/local/miniconda/lib/python3.7/concurrent/futures/thread.py", line 57, in run result = self.fn(*self.args, **self.kwargs) File "/usr/local/miniconda/lib/python3.7/site-packages/niworkflows/interfaces/itk.py", line 234, in _applytfms runtime = xfm.run().runtime File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/interfaces/base/core.py", line 428, in run runtime = self._run_interface(runtime) File "/usr/local/miniconda/lib/python3.7/site-packages/niworkflows/interfaces/fixes.py", line 48, in _run_interface message="%s (niworkflows v%s)" % (self.__class__.__name__, __version__), File "/usr/local/miniconda/lib/python3.7/site-packages/niworkflows/interfaces/utils.py", line 239, in _copyxform newimg.to_filename(out_image) File "/usr/local/miniconda/lib/python3.7/site-packages/nibabel/filebasedimages.py", line 333, in to_filename self.to_file_map() File "/usr/local/miniconda/lib/python3.7/site-packages/nibabel/analyze.py", line 1007, in to_file_map data = np.asanyarray(self.dataobj) File "/usr/local/miniconda/lib/python3.7/site-packages/numpy/core/numeric.py", line 553, in asanyarray return array(a, dtype, copy=False, order=order, subok=True) File "/usr/local/miniconda/lib/python3.7/site-packages/nibabel/arrayproxy.py", line 391, in __array__ arr = self._get_scaled(dtype=dtype, slicer=()) File "/usr/local/miniconda/lib/python3.7/site-packages/nibabel/arrayproxy.py", line 358, in _get_scaled scaled = apply_read_scaling(self._get_unscaled(slicer=slicer), scl_slope, scl_inter) File "/usr/local/miniconda/lib/python3.7/site-packages/nibabel/arrayproxy.py", line 337, in _get_unscaled mmap=self._mmap) File "/usr/local/miniconda/lib/python3.7/site-packages/nibabel/volumeutils.py", line 519, in array_from_file infile.seek(offset) File "indexed_gzip/indexed_gzip.pyx", line 635, in indexed_gzip.indexed_gzip._IndexedGzipFile.seek indexed_gzip.indexed_gzip.CrcError: CRC/size validation failed - the GZIP data might be corrupt