2023-06-29T15:31:33 tedana.tedana_workflow INFO Using output directory: /scratch/st-toddrebe-1/tedana/fcd_derivatives/tedana/sub-013/task-1 2023-06-29T15:31:33 tedana.tedana_workflow INFO Loading input data: ['/arc/project/st-toddrebe-1/FCD/BIDS_datasets/MAC2_dataset_230525_1/derivatives/sub-013/func/sub-013_task-rest_run-1_echo-1_desc-preproc_bold.nii.gz', '/arc/project/st-toddrebe-1/FCD/BIDS_datasets/MAC2_dataset_230525_1/derivatives/sub-013/func/sub-013_task-rest_run-1_echo-2_desc-preproc_bold.nii.gz', '/arc/project/st-toddrebe-1/FCD/BIDS_datasets/MAC2_dataset_230525_1/derivatives/sub-013/func/sub-013_task-rest_run-1_echo-3_desc-preproc_bold.nii.gz'] 2023-06-29T15:31:48 io.__init__ INFO Generating figures directory: /scratch/st-toddrebe-1/tedana/fcd_derivatives/tedana/sub-013/task-1/figures 2023-06-29T15:31:48 tedana.tedana_workflow INFO Computing EPI mask from first echo 2023-06-29T15:31:49 tedana.tedana_workflow INFO Computing T2* map 2023-06-29T15:33:38 combine.make_optcom INFO Optimally combining data with voxel-wise T2* estimates 2023-06-29T15:33:43 tedana.tedana_workflow INFO Writing optimally combined data set: /scratch/st-toddrebe-1/tedana/fcd_derivatives/tedana/sub-013/task-1/sub-013_task-1_space-Native_desc-optcom_bold.nii.gz 2023-06-29T15:33:43 pca.tedpca INFO Computing PCA of optimally combined multi-echo data with selection criteria: kundu 2023-06-29T15:33:44 collect.generate_metrics INFO Calculating weight maps 2023-06-29T15:33:46 collect.generate_metrics INFO Calculating parameter estimate maps for optimally combined data 2023-06-29T15:33:58 collect.generate_metrics INFO Calculating z-statistic maps 2023-06-29T15:34:03 collect.generate_metrics INFO Calculating F-statistic maps 2023-06-29T15:34:31 collect.generate_metrics INFO Thresholding z-statistic maps 2023-06-29T15:34:37 collect.generate_metrics INFO Calculating T2* F-statistic maps 2023-06-29T15:34:42 collect.generate_metrics INFO Calculating S0 F-statistic maps 2023-06-29T15:34:50 collect.generate_metrics INFO Counting significant voxels in T2* F-statistic maps 2023-06-29T15:34:50 collect.generate_metrics INFO Counting significant voxels in S0 F-statistic maps 2023-06-29T15:34:50 collect.generate_metrics INFO Thresholding optimal combination beta maps to match T2* F-statistic maps 2023-06-29T15:35:07 collect.generate_metrics INFO Thresholding optimal combination beta maps to match S0 F-statistic maps 2023-06-29T15:35:20 collect.generate_metrics INFO Calculating kappa and rho 2023-06-29T15:35:20 collect.generate_metrics INFO Calculating variance explained 2023-06-29T15:35:20 collect.generate_metrics INFO Calculating normalized variance explained 2023-06-29T15:35:20 collect.generate_metrics INFO Calculating DSI between thresholded T2* F-statistic and optimal combination beta maps 2023-06-29T15:35:20 utils.dice WARNING 174 of 192 components have empty maps, resulting in Dice values of 0. Please check your component table for dice columns with 0-values. 2023-06-29T15:35:20 collect.generate_metrics INFO Calculating DSI between thresholded S0 F-statistic and optimal combination beta maps 2023-06-29T15:35:20 utils.dice WARNING 174 of 192 components have empty maps, resulting in Dice values of 0. Please check your component table for dice columns with 0-values. 2023-06-29T15:35:20 collect.generate_metrics INFO Calculating signal-noise t-statistics 2023-06-29T15:35:21 collect.generate_metrics INFO Counting significant noise voxels from z-statistic maps 2023-06-29T15:35:21 collect.generate_metrics INFO Calculating decision table score 2023-06-29T15:37:42 tedpca.kundu_tedpca INFO Performing PCA component selection with Kundu decision tree 2023-06-29T15:37:42 tedpca.kundu_tedpca INFO Selected 187 components with Kappa threshold: 14.28, Rho threshold: 21.08 2023-06-29T16:03:09 ica.tedica WARNING ICA with random seed 2023 failed to converge after 1000 iterations 2023-06-29T16:03:09 ica.tedica WARNING Random seed updated to 2024 2023-06-29T16:29:18 ica.tedica WARNING ICA with random seed 2024 failed to converge after 1000 iterations 2023-06-29T16:29:18 ica.tedica WARNING Random seed updated to 2025 2023-06-29T16:51:08 ica.tedica WARNING ICA with random seed 2025 failed to converge after 1000 iterations 2023-06-29T16:51:08 ica.tedica WARNING Random seed updated to 2026 2023-06-29T17:11:12 ica.tedica WARNING ICA with random seed 2026 failed to converge after 1000 iterations 2023-06-29T17:11:12 ica.tedica WARNING Random seed updated to 2027 2023-06-29T17:30:15 ica.tedica WARNING ICA with random seed 2027 failed to converge after 1000 iterations 2023-06-29T17:30:15 ica.tedica WARNING Random seed updated to 2028 2023-06-29T17:49:04 ica.tedica WARNING ICA with random seed 2028 failed to converge after 1000 iterations 2023-06-29T17:49:04 ica.tedica WARNING Random seed updated to 2029 2023-06-29T18:06:44 ica.tedica WARNING ICA with random seed 2029 failed to converge after 1000 iterations 2023-06-29T18:06:44 ica.tedica WARNING Random seed updated to 2030 2023-06-29T18:24:34 ica.tedica WARNING ICA with random seed 2030 failed to converge after 1000 iterations 2023-06-29T18:24:34 ica.tedica WARNING Random seed updated to 2031 2023-06-29T18:41:27 ica.tedica WARNING ICA with random seed 2031 failed to converge after 1000 iterations 2023-06-29T18:41:27 ica.tedica WARNING Random seed updated to 2032 2023-06-29T18:57:58 ica.tedica WARNING ICA with random seed 2032 failed to converge after 1000 iterations 2023-06-29T18:57:58 ica.tedica WARNING Random seed updated to 2033 2023-06-29T19:14:00 ica.tedica WARNING ICA with random seed 2033 failed to converge after 1000 iterations 2023-06-29T19:14:00 ica.tedica WARNING Random seed updated to 2034 2023-06-29T19:29:25 ica.tedica WARNING ICA with random seed 2034 failed to converge after 1000 iterations 2023-06-29T19:29:26 ica.tedica WARNING Random seed updated to 2035 2023-06-29T19:44:13 ica.tedica WARNING ICA with random seed 2035 failed to converge after 1000 iterations 2023-06-29T19:44:13 ica.tedica WARNING Random seed updated to 2036 2023-06-29T20:00:50 ica.tedica WARNING ICA with random seed 2036 failed to converge after 1000 iterations 2023-06-29T20:00:50 ica.tedica WARNING Random seed updated to 2037 2023-06-29T20:17:38 ica.tedica WARNING ICA with random seed 2037 failed to converge after 1000 iterations 2023-06-29T20:17:38 ica.tedica WARNING Random seed updated to 2038