Wed Feb 10 06:24:33 UTC 2021 /output/january_2021/subject1 /opt/freesurfer/bin/recon-all -s subject1 -i /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0101 -sd /output/january_2021 -all -qcache -parallel subjid subject1 setenv SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Actual FREESURFER_HOME /opt/freesurfer build-stamp.txt: freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux cputime unlimited filesize unlimited datasize unlimited stacksize 8192 kbytes coredumpsize unlimited memoryuse unlimited vmemoryuse unlimited descriptors 1048576 memorylocked 16384 kbytes maxproc unlimited maxlocks unlimited maxsignal 2063164 maxmessage 819200 maxnice 0 maxrtprio 0 maxrttime unlimited total used free shared buff/cache available Mem: 528244576 172224492 101512608 465320 254507476 350731400 Swap: 67108860 17874944 49233916 ######################################## program versions used $Id: recon-all,v 1.580.2.16 2017/01/18 14:11:24 zkaufman Exp $ $Id: mri_motion_correct.fsl,v 1.15 2016/02/16 17:17:20 zkaufman Exp $ mri_convert.bin -all-info ProgramName: mri_convert.bin ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:33-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 FLIRT version 5.5 $Id: talairach_avi,v 1.13 2015/12/23 04:25:17 greve Exp $ mri_convert.bin --version stable6 ProgramName: tkregister2_cmdl ProgramArguments: --all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:33-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: tkregister2.c,v 1.132.2.1 2016/08/02 21:17:29 greve Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 Program nu_correct, built from: Package MNI N3, version 1.12.0, compiled by nicks@terrier (x86_64-unknown-linux-gnu) on 2015-06-19 at 01:25:34 ProgramName: mri_make_uchar ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:33-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_make_uchar.c,v 1.4 2011/03/02 00:04:14 nicks Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_normalize ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2021/02/10-06:24:33-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_normalize.c,v 1.88.2.3 2016/12/27 16:47:13 zkaufman Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_watershed ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:33-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_watershed.cpp,v 1.103 2016/06/17 18:00:49 zkaufman Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_gcut ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:33-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_gcut.cpp,v 1.14 2011/03/02 00:04:16 nicks Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_segment ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_segment.c,v 1.43.2.1 2016/10/27 22:24:52 zkaufman Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_label2label.bin ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_label2label.c,v 1.48.2.2 2016/12/12 14:15:26 zkaufman Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_em_register ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_em_register.c,v 1.105.2.1 2016/10/27 22:25:10 zkaufman Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_ca_normalize ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_ca_normalize.c,v 1.67.2.2 2016/10/27 22:25:09 zkaufman Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_ca_register ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_ca_register.c,v 1.96.2.3 2016/10/27 22:25:10 zkaufman Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_ca_label ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_ca_label.c,v 1.113.2.2 2016/10/27 22:25:10 zkaufman Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_pretess ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_pretess.c,v 1.22 2013/08/30 18:12:25 mreuter Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_fill ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_fill.c,v 1.119 2011/10/25 14:09:58 fischl Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_tessellate ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_tessellate.c,v 1.38.2.1 2016/07/26 18:46:38 zkaufman Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_concatenate_lta.bin ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_concatenate_lta.c,v 1.16 2015/11/21 00:06:20 greve Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_normalize_tp2 ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_normalize_tp2.c,v 1.8 2011/03/02 00:04:23 nicks Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_smooth ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mris_smooth.c,v 1.30 2014/01/21 18:48:21 fischl Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_inflate ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mris_inflate.c,v 1.45 2016/01/20 23:42:15 greve Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_curvature ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mris_curvature.c,v 1.31 2011/03/02 00:04:30 nicks Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_sphere ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mris_sphere.c,v 1.61 2016/01/20 23:42:15 greve Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_fix_topology ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mris_fix_topology.c,v 1.50.2.1 2016/10/27 22:25:58 zkaufman Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_topo_fixer ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mris_topo_fixer.cpp,v 1.29 2011/03/02 00:04:34 nicks Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_ca_label ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mris_ca_label.c,v 1.37 2014/02/04 17:46:42 fischl Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_euler_number ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mris_euler_number.c,v 1.10 2013/01/14 22:39:14 greve Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_make_surfaces ProgramArguments: -all-info ProgramVersion: $Name: $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mris_make_surfaces.c,v 1.164.2.4 2016/12/13 22:26:32 zkaufman Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_register ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mris_register.c,v 1.63 2016/01/20 23:43:04 greve Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_volmask ProgramArguments: --all-info ProgramVersion: $Name: $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mris_volmask.cpp,v 1.26.2.2 2016/11/18 20:05:18 zkaufman Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_anatomical_stats ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mris_anatomical_stats.c,v 1.79 2016/03/14 15:15:34 greve Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mrisp_paint ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mrisp_paint.c,v 1.12 2016/03/22 14:47:57 fischl Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_curvature_stats ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mris_curvature_stats.c,v 1.65 2015/06/04 20:50:51 nicks Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mris_calc ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mris_calc.c,v 1.54.2.1 2016/09/27 18:51:28 greve Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 $Id: mri_robust_register.cpp,v 1.77 2016/01/20 23:36:17 greve Exp $ ProgramName: mri_robust_register.bin ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_robust_register.cpp,v 1.77 2016/01/20 23:36:17 greve Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 $Id: mri_robust_template.cpp,v 1.54 2016/05/05 21:17:08 mreuter Exp $ ProgramName: mri_robust_template ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_robust_template.cpp,v 1.54 2016/05/05 21:17:08 mreuter Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_and ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_and.c,v 1.4 2011/03/02 00:04:13 nicks Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_or ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_or.c,v 1.5 2013/03/20 15:03:29 lzollei Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_fuse_segmentations ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_fuse_segmentations.c,v 1.8 2011/03/02 00:04:15 nicks Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_segstats ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ProgramName: mri_relabel_hypointensities ProgramArguments: -all-info ProgramVersion: $Name: stable6 $ TimeStamp: 2021/02/10-06:24:34-GMT BuildTimeStamp: Oct 20 2017 13:59:15 CVS: $Id: mri_relabel_hypointensities.c,v 1.13 2015/05/15 18:44:10 nicks Exp $ User: root Machine: 85b04e758063 Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 40400 ####################################### GCADIR /opt/freesurfer/average GCA RB_all_2016-05-10.vc700.gca GCASkull RB_all_withskull_2016-05-10.vc700.gca AvgCurvTif folding.atlas.acfb40.noaparc.i12.2016-08-02.tif GCSDIR /opt/freesurfer/average GCS DKaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ####################################### /output/january_2021/subject1 mri_convert /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0101 /output/january_2021/subject1/mri/orig/001.mgz mri_convert.bin /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0101 /output/january_2021/subject1/mri/orig/001.mgz $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0101... Starting DICOMRead2() dcmfile = /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0101 dcmdir = /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0101 break DICOMRead.c:5228 Ref Series No = 7 Found 202 files, checking for dicoms ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0001 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0002 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0003 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0004 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0005 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0006 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0007 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0008 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0009 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0010 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0011 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0012 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0013 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0014 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0015 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0016 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0017 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0018 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0019 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0020 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0021 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0022 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0023 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0024 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0025 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0026 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0027 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0028 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0029 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0030 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0031 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0032 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0033 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0034 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0035 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0036 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0037 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0038 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0039 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0040 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0041 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0042 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0043 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0044 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0045 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0046 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0047 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0048 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0049 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0050 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0051 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0052 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0053 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0054 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0055 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0056 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0057 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0058 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0059 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0060 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0061 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0062 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0063 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0064 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0065 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0066 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0067 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0068 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0069 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0070 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0071 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0072 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0073 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0074 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0075 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0076 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0077 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0078 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0079 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0080 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0081 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0082 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0083 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0084 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0085 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0086 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0087 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0088 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0089 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0090 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0091 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0092 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0093 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0094 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0095 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0096 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0097 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0098 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0099 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0100 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0101 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0102 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0103 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0104 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0105 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0106 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0107 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0108 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0109 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0110 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0111 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0112 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0113 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0114 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0115 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0116 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0117 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0118 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0119 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0120 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0121 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0122 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0123 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0124 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0125 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0126 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0127 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0128 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0129 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0130 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0131 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0132 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0133 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0134 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0135 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0136 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0137 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0138 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0139 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0140 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0141 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0142 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0143 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0144 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0145 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0146 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0147 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0148 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0149 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0150 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0151 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0152 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0153 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0154 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0155 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0156 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0157 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0158 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0159 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0160 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0161 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0162 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0163 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0164 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0165 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0166 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0167 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0168 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0169 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0170 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0171 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0172 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0173 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0174 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0175 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0176 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0177 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0178 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0179 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0180 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0181 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0182 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0183 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0184 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0185 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0186 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0187 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0188 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0189 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0190 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0191 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0192 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0193 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0194 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0195 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0196 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0197 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0198 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0199 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0200 break DICOMRead.c:5228 Found 200 dicom files in series. ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0001 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0002 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0003 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0004 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0005 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0006 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0007 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0008 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0009 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0010 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0011 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0012 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0013 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0014 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0015 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0016 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0017 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0018 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0019 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0020 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0021 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0022 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0023 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0024 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0025 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0026 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0027 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0028 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0029 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0030 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0031 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0032 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0033 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0034 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0035 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0036 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0037 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0038 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0039 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0040 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0041 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0042 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0043 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0044 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0045 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0046 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0047 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0048 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0049 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0050 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0051 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0052 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0053 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0054 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0055 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0056 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0057 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0058 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0059 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0060 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0061 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0062 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0063 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0064 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0065 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0066 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0067 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0068 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0069 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0070 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0071 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0072 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0073 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0074 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0075 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0076 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0077 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0078 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0079 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0080 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0081 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0082 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0083 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0084 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0085 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0086 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0087 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0088 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0089 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0090 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0091 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0092 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0093 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0094 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0095 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0096 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0097 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0098 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0099 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0100 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0101 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0102 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0103 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0104 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0105 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0106 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0107 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0108 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0109 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0110 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0111 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0112 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0113 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0114 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0115 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0116 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0117 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0118 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0119 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0120 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0121 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0122 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0123 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0124 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0125 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0126 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0127 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0128 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0129 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0130 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0131 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0132 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0133 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0134 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0135 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0136 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0137 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0138 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0139 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0140 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0141 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0142 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0143 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0144 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0145 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0146 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0147 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0148 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0149 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0150 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0151 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0152 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0153 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0154 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0155 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0156 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0157 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0158 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0159 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0160 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0161 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0162 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0163 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0164 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0165 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0166 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0167 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0168 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0169 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0170 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0171 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0172 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0173 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0174 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0175 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0176 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0177 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0178 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0179 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0180 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0181 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0182 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0183 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0184 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0185 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0186 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0187 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0188 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0189 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0190 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0191 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0192 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0193 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0194 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0195 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0196 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0197 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0198 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0199 break DICOMRead.c:5228 ERROR: don't know how to get DWI parameters from --TOSHIBA_MEC -- ERROR: GetDICOMInfo(): dcmGetDWIParams() 1 DICOM File: /input/january_2021/subject1/export-250121-120852/PAT1/20210125/3_MR/IM0200 break DICOMRead.c:5228 First Sorting Computing Slice Direction Vs: 0.9998 0 -0.0185 Vs: 0.999829 0 -0.0185005 Second Sorting IsDWI = 0, IsPhilipsDWI = 0 Counting frames nframes = 1 nslices = 200 ndcmfiles = 200 PE Dir = ROW (dicom read) Loading pixel data TR=12.00, TE=5.00, TI=300.00, flip angle=18.00 i_ras = (-0, -1, 0) j_ras = (0.0184365, -0, -0.99983) k_ras = (-0.999829, -0, -0.0185005) writing to /output/january_2021/subject1/mri/orig/001.mgz... #-------------------------------------------- #@# MotionCor Wed Feb 10 06:24:43 UTC 2021 Found 1 runs /output/january_2021/subject1/mri/orig/001.mgz Checking for (invalid) multi-frame inputs... WARNING: only one run found. This is OK, but motion correction cannot be performed on one run, so I'll copy the run to rawavg and continue. cp /output/january_2021/subject1/mri/orig/001.mgz /output/january_2021/subject1/mri/rawavg.mgz /output/january_2021/subject1 mri_convert /output/january_2021/subject1/mri/rawavg.mgz /output/january_2021/subject1/mri/orig.mgz --conform mri_convert.bin /output/january_2021/subject1/mri/rawavg.mgz /output/january_2021/subject1/mri/orig.mgz --conform $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from /output/january_2021/subject1/mri/rawavg.mgz... TR=12.00, TE=5.00, TI=300.00, flip angle=18.00 i_ras = (-0, -1, 0) j_ras = (0.0184365, -0, -0.99983) k_ras = (-0.999829, -0, -0.0185005) changing data type from short to uchar (noscale = 0)... MRIchangeType: Building histogram Reslicing using trilinear interpolation writing to /output/january_2021/subject1/mri/orig.mgz... mri_add_xform_to_header -c /output/january_2021/subject1/mri/transforms/talairach.xfm /output/january_2021/subject1/mri/orig.mgz /output/january_2021/subject1/mri/orig.mgz INFO: extension is mgz #-------------------------------------------- #@# Talairach Wed Feb 10 06:24:54 UTC 2021 /output/january_2021/subject1/mri mri_nu_correct.mni --no-rescale --i orig.mgz --o orig_nu.mgz --n 1 --proto-iters 1000 --distance 50 /output/january_2021/subject1/mri /opt/freesurfer/bin/mri_nu_correct.mni --no-rescale --i orig.mgz --o orig_nu.mgz --n 1 --proto-iters 1000 --distance 50 nIters 1 $Id: mri_nu_correct.mni,v 1.27 2016/02/26 16:19:49 mreuter Exp $ Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux Wed Feb 10 06:24:54 UTC 2021 Program nu_correct, built from: Package MNI N3, version 1.12.0, compiled by nicks@terrier (x86_64-unknown-linux-gnu) on 2015-06-19 at 01:25:34 /usr/bin/bc tmpdir is ./tmp.mri_nu_correct.mni.12366 /output/january_2021/subject1/mri mri_convert orig.mgz ./tmp.mri_nu_correct.mni.12366/nu0.mnc -odt float mri_convert.bin orig.mgz ./tmp.mri_nu_correct.mni.12366/nu0.mnc -odt float $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from orig.mgz... TR=12.00, TE=5.00, TI=300.00, flip angle=18.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) changing data type from uchar to float (noscale = 0)... writing to ./tmp.mri_nu_correct.mni.12366/nu0.mnc... -------------------------------------------------------- Iteration 1 Wed Feb 10 06:24:56 UTC 2021 nu_correct -clobber ./tmp.mri_nu_correct.mni.12366/nu0.mnc ./tmp.mri_nu_correct.mni.12366/nu1.mnc -tmpdir ./tmp.mri_nu_correct.mni.12366/0/ -iterations 1000 -distance 50 [root@85b04e758063:/output/january_2021/subject1/mri/] [2021-02-10 06:24:56] running: /opt/freesurfer/mni/bin/nu_estimate_np_and_em -parzen -log -sharpen 0.15 0.01 -iterations 1000 -stop 0.001 -shrink 4 -auto_mask -nonotify -b_spline 1.0e-7 -distance 50 -quiet -execute -clobber -nokeeptmp -tmpdir ./tmp.mri_nu_correct.mni.12366/0/ ./tmp.mri_nu_correct.mni.12366/nu0.mnc ./tmp.mri_nu_correct.mni.12366/nu1.imp Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done 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Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Processing:.................................................................Done Number of iterations: 85 CV of field change: 0.00098599 mri_convert ./tmp.mri_nu_correct.mni.12366/nu1.mnc orig_nu.mgz --like orig.mgz --conform mri_convert.bin ./tmp.mri_nu_correct.mni.12366/nu1.mnc orig_nu.mgz --like orig.mgz --conform $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from ./tmp.mri_nu_correct.mni.12366/nu1.mnc... TR=0.00, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) INFO: transform src into the like-volume: orig.mgz changing data type from float to uchar (noscale = 0)... MRIchangeType: Building histogram writing to orig_nu.mgz... Wed Feb 10 06:26:44 UTC 2021 mri_nu_correct.mni done talairach_avi --i orig_nu.mgz --xfm transforms/talairach.auto.xfm talairach_avi log file is transforms/talairach_avi.log... Started at Wed Feb 10 06:26:44 UTC 2021 Ended at Wed Feb 10 06:27:10 UTC 2021 talairach_avi done cp transforms/talairach.auto.xfm transforms/talairach.xfm #-------------------------------------------- #@# Talairach Failure Detection Wed Feb 10 06:27:12 UTC 2021 /output/january_2021/subject1/mri talairach_afd -T 0.005 -xfm transforms/talairach.xfm talairach_afd: Talairach Transform: transforms/talairach.xfm OK (p=0.6888, pval=0.4932 >= threshold=0.0050) awk -f /opt/freesurfer/bin/extract_talairach_avi_QA.awk /output/january_2021/subject1/mri/transforms/talairach_avi.log tal_QC_AZS /output/january_2021/subject1/mri/transforms/talairach_avi.log TalAviQA: 0.96986 z-score: -1 #-------------------------------------------- #@# Nu Intensity Correction Wed Feb 10 06:27:13 UTC 2021 mri_nu_correct.mni --i orig.mgz --o nu.mgz --uchar transforms/talairach.xfm --n 2 /output/january_2021/subject1/mri /opt/freesurfer/bin/mri_nu_correct.mni --i orig.mgz --o nu.mgz --uchar transforms/talairach.xfm --n 2 nIters 2 $Id: mri_nu_correct.mni,v 1.27 2016/02/26 16:19:49 mreuter Exp $ Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux Wed Feb 10 06:27:13 UTC 2021 Program nu_correct, built from: Package MNI N3, version 1.12.0, compiled by nicks@terrier (x86_64-unknown-linux-gnu) on 2015-06-19 at 01:25:34 /usr/bin/bc tmpdir is ./tmp.mri_nu_correct.mni.27195 /output/january_2021/subject1/mri mri_convert orig.mgz ./tmp.mri_nu_correct.mni.27195/nu0.mnc -odt float mri_convert.bin orig.mgz ./tmp.mri_nu_correct.mni.27195/nu0.mnc -odt float $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from orig.mgz... TR=12.00, TE=5.00, TI=300.00, flip angle=18.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) changing data type from uchar to float (noscale = 0)... writing to ./tmp.mri_nu_correct.mni.27195/nu0.mnc... -------------------------------------------------------- Iteration 1 Wed Feb 10 06:27:15 UTC 2021 nu_correct -clobber ./tmp.mri_nu_correct.mni.27195/nu0.mnc ./tmp.mri_nu_correct.mni.27195/nu1.mnc -tmpdir ./tmp.mri_nu_correct.mni.27195/0/ [root@85b04e758063:/output/january_2021/subject1/mri/] [2021-02-10 06:27:15] running: /opt/freesurfer/mni/bin/nu_estimate_np_and_em -parzen -log -sharpen 0.15 0.01 -iterations 50 -stop 0.001 -shrink 4 -auto_mask -nonotify -b_spline 1.0e-7 -distance 200 -quiet -execute -clobber -nokeeptmp -tmpdir ./tmp.mri_nu_correct.mni.27195/0/ ./tmp.mri_nu_correct.mni.27195/nu0.mnc ./tmp.mri_nu_correct.mni.27195/nu1.imp Processing:.................................................................Done 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Processing:.................................................................Done Number of iterations: 50 CV of field change: 0.00157285 -------------------------------------------------------- Iteration 2 Wed Feb 10 06:28:11 UTC 2021 nu_correct -clobber ./tmp.mri_nu_correct.mni.27195/nu1.mnc ./tmp.mri_nu_correct.mni.27195/nu2.mnc -tmpdir ./tmp.mri_nu_correct.mni.27195/1/ [root@85b04e758063:/output/january_2021/subject1/mri/] [2021-02-10 06:28:11] running: /opt/freesurfer/mni/bin/nu_estimate_np_and_em -parzen -log -sharpen 0.15 0.01 -iterations 50 -stop 0.001 -shrink 4 -auto_mask -nonotify -b_spline 1.0e-7 -distance 200 -quiet -execute -clobber -nokeeptmp -tmpdir ./tmp.mri_nu_correct.mni.27195/1/ ./tmp.mri_nu_correct.mni.27195/nu1.mnc ./tmp.mri_nu_correct.mni.27195/nu2.imp Processing:.................................................................Done Processing:.................................................................Done 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./tmp.mri_nu_correct.mni.27195/nu2.mnc --min -1 --o ./tmp.mri_nu_correct.mni.27195/ones.mgz $Id: mri_binarize.c,v 1.43 2016/06/09 20:46:21 greve Exp $ cwd /output/january_2021/subject1/mri cmdline mri_binarize.bin --i ./tmp.mri_nu_correct.mni.27195/nu2.mnc --min -1 --o ./tmp.mri_nu_correct.mni.27195/ones.mgz sysname Linux hostname 85b04e758063 machine x86_64 user root input ./tmp.mri_nu_correct.mni.27195/nu2.mnc frame 0 nErode3d 0 nErode2d 0 output ./tmp.mri_nu_correct.mni.27195/ones.mgz Binarizing based on threshold min -1 max +infinity binval 1 binvalnot 0 fstart = 0, fend = 0, nframes = 1 Found 16777216 values in range Counting number of voxels in first frame Found 16777216 voxels in final mask Count: 16777216 16777216.000000 16777216 100.000000 mri_binarize done mri_segstats --id 1 --seg ./tmp.mri_nu_correct.mni.27195/ones.mgz --i orig.mgz --sum ./tmp.mri_nu_correct.mni.27195/sum.junk --avgwf ./tmp.mri_nu_correct.mni.27195/input.mean.dat $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ cwd cmdline mri_segstats --id 1 --seg ./tmp.mri_nu_correct.mni.27195/ones.mgz --i orig.mgz --sum ./tmp.mri_nu_correct.mni.27195/sum.junk --avgwf ./tmp.mri_nu_correct.mni.27195/input.mean.dat sysname Linux hostname 85b04e758063 machine x86_64 user root UseRobust 0 Loading ./tmp.mri_nu_correct.mni.27195/ones.mgz Loading orig.mgz Voxel Volume is 1 mm^3 Generating list of segmentation ids Found 1 segmentations Computing statistics for each segmentation Reporting on 1 segmentations Using PrintSegStat Computing spatial average of each frame 0 Writing to ./tmp.mri_nu_correct.mni.27195/input.mean.dat mri_segstats done mri_segstats --id 1 --seg ./tmp.mri_nu_correct.mni.27195/ones.mgz --i ./tmp.mri_nu_correct.mni.27195/nu2.mnc --sum ./tmp.mri_nu_correct.mni.27195/sum.junk --avgwf ./tmp.mri_nu_correct.mni.27195/output.mean.dat $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ cwd cmdline mri_segstats --id 1 --seg ./tmp.mri_nu_correct.mni.27195/ones.mgz --i ./tmp.mri_nu_correct.mni.27195/nu2.mnc --sum ./tmp.mri_nu_correct.mni.27195/sum.junk --avgwf ./tmp.mri_nu_correct.mni.27195/output.mean.dat sysname Linux hostname 85b04e758063 machine x86_64 user root UseRobust 0 Loading ./tmp.mri_nu_correct.mni.27195/ones.mgz Loading ./tmp.mri_nu_correct.mni.27195/nu2.mnc Voxel Volume is 1 mm^3 Generating list of segmentation ids Found 1 segmentations Computing statistics for each segmentation Reporting on 1 segmentations Using PrintSegStat Computing spatial average of each frame 0 Writing to ./tmp.mri_nu_correct.mni.27195/output.mean.dat mri_segstats done mris_calc -o ./tmp.mri_nu_correct.mni.27195/nu2.mnc ./tmp.mri_nu_correct.mni.27195/nu2.mnc mul 1.06746494738638908182 Saving result to './tmp.mri_nu_correct.mni.27195/nu2.mnc' (type = MINC ) [ ok ] mri_convert ./tmp.mri_nu_correct.mni.27195/nu2.mnc nu.mgz --like orig.mgz mri_convert.bin ./tmp.mri_nu_correct.mni.27195/nu2.mnc nu.mgz --like orig.mgz $Id: mri_convert.c,v 1.226 2016/02/26 16:15:24 mreuter Exp $ reading from ./tmp.mri_nu_correct.mni.27195/nu2.mnc... TR=0.00, TE=0.00, TI=0.00, flip angle=0.00 i_ras = (-1, 0, 0) j_ras = (0, 0, -1) k_ras = (0, 1, 0) INFO: transform src into the like-volume: orig.mgz writing to nu.mgz... mri_make_uchar nu.mgz transforms/talairach.xfm nu.mgz type change took 0 minutes and 11 seconds. mapping (26, 139) to ( 3, 110) Wed Feb 10 06:29:44 UTC 2021 mri_nu_correct.mni done mri_add_xform_to_header -c /output/january_2021/subject1/mri/transforms/talairach.xfm nu.mgz nu.mgz INFO: extension is mgz #-------------------------------------------- #@# Intensity Normalization Wed Feb 10 06:29:45 UTC 2021 /output/january_2021/subject1/mri mri_normalize -g 1 -mprage nu.mgz T1.mgz using max gradient = 1.000 assuming input volume is MGH (Van der Kouwe) MP-RAGE reading from nu.mgz... normalizing image... talairach transform 0.99958 -0.03769 0.00255 -0.44144; 0.05447 1.00078 0.31763 -22.06095; -0.02022 -0.31460 1.08319 -38.89346; 0.00000 0.00000 0.00000 1.00000; processing without aseg, no1d=0 MRInormInit(): INFO: Modifying talairach volume c_(r,a,s) based on average_305 MRInormalize(): MRIsplineNormalize(): npeaks = 10 Starting OpenSpline(): npoints = 10 building Voronoi diagram... performing soap bubble smoothing, sigma = 8... Iterating 2 times --------------------------------- 3d normalization pass 1 of 2 white matter peak found at 110 white matter peak found at 109 gm peak at 87 (87), valley at 77 (77) csf peak at 62, setting threshold to 78 building Voronoi diagram... performing soap bubble smoothing, sigma = 8... --------------------------------- 3d normalization pass 2 of 2 white matter peak found at 110 white matter peak found at 110 gm peak at 88 (88), valley at 78 (78) csf peak at 58, setting threshold to 78 building Voronoi diagram... performing soap bubble smoothing, sigma = 8... Done iterating --------------------------------- writing output to T1.mgz 3D bias adjustment took 1 minutes and 55 seconds. #-------------------------------------------- #@# Skull Stripping Wed Feb 10 06:31:40 UTC 2021 /output/january_2021/subject1/mri mri_em_register -rusage /output/january_2021/subject1/touch/rusage.mri_em_register.skull.dat -skull nu.mgz /opt/freesurfer/average/RB_all_withskull_2016-05-10.vc700.gca transforms/talairach_with_skull.lta aligning to atlas containing skull, setting unknown_nbr_spacing = 5 == Number of threads available to mri_em_register for OpenMP = 4 == reading 1 input volumes... logging results to talairach_with_skull.log reading '/opt/freesurfer/average/RB_all_withskull_2016-05-10.vc700.gca'... average std = 22.9 using min determinant for regularization = 52.6 0 singular and 9002 ill-conditioned covariance matrices regularized reading 'nu.mgz'... freeing gibbs priors...done. accounting for voxel sizes in initial transform bounding unknown intensity as < 8.7 or > 569.1 total sample mean = 77.6 (1399 zeros) ************************************************ spacing=8, using 3243 sample points, tol=1.00e-05... ************************************************ register_mri: find_optimal_transform find_optimal_transform: nsamples 3243, passno 0, spacing 8 resetting wm mean[0]: 100 --> 108 resetting gm mean[0]: 61 --> 61 input volume #1 is the most T1-like using real data threshold=13.0 skull bounding box = (48, 19, 25) --> (211, 230, 222) using (102, 89, 124) as brain centroid... mean wm in atlas = 108, using box (82,63,100) --> (122, 115,148) to find MRI wm before smoothing, mri peak at 113 robust fit to distribution - 113 +- 6.7 after smoothing, mri peak at 113, scaling input intensities by 0.956 scaling channel 0 by 0.955752 initial log_p = -4.745 ************************************************ First Search limited to translation only. ************************************************ max log p = -4.421322 @ (-9.091, 27.273, -9.091) max log p = -4.304946 @ (4.545, -4.545, -4.545) max log p = -4.280910 @ (2.273, 2.273, -2.273) max log p = -4.247898 @ (1.136, 1.136, 3.409) max log p = -4.243741 @ (-0.568, -0.568, -1.705) max log p = -4.243741 @ (0.000, 0.000, 0.000) Found translation: (-1.7, 25.6, -14.2): log p = -4.244 **************************************** Nine parameter search. iteration 0 nscales = 0 ... **************************************** Result so far: scale 1.000: max_log_p=-4.118, old_max_log_p =-4.244 (thresh=-4.2) 1.06375 0.00000 0.00000 -9.77401; 0.00000 1.11081 0.29764 -17.09673; 0.00000 -0.27823 1.03837 13.43762; 0.00000 0.00000 0.00000 1.00000; **************************************** Nine parameter search. iteration 1 nscales = 0 ... **************************************** Result so far: scale 1.000: max_log_p=-4.113, old_max_log_p =-4.118 (thresh=-4.1) 1.06375 0.00000 0.00000 -9.77401; 0.00000 1.22295 0.17153 -13.89852; 0.00000 -0.13086 1.06834 -6.51742; 0.00000 0.00000 0.00000 1.00000; **************************************** Nine parameter search. iteration 2 nscales = 0 ... **************************************** Result so far: scale 1.000: max_log_p=-4.113, old_max_log_p =-4.113 (thresh=-4.1) 1.06375 0.00000 0.00000 -9.77401; 0.00000 1.22295 0.17153 -13.89852; 0.00000 -0.13086 1.06834 -6.51742; 0.00000 0.00000 0.00000 1.00000; reducing scale to 0.2500 **************************************** Nine parameter search. iteration 3 nscales = 1 ... **************************************** Result so far: scale 0.250: max_log_p=-4.043, old_max_log_p =-4.113 (thresh=-4.1) 1.00036 0.05600 0.08303 -20.05193; -0.06768 1.11823 0.31932 -13.89808; -0.06596 -0.32129 1.00415 32.63457; 0.00000 0.00000 0.00000 1.00000; **************************************** Nine parameter search. iteration 4 nscales = 1 ... **************************************** Result so far: scale 0.250: max_log_p=-4.043, old_max_log_p =-4.043 (thresh=-4.0) 1.00036 0.05600 0.08303 -20.05193; -0.06768 1.11823 0.31932 -13.89808; -0.06596 -0.32129 1.00415 32.63457; 0.00000 0.00000 0.00000 1.00000; reducing scale to 0.0625 **************************************** Nine parameter search. iteration 5 nscales = 2 ... **************************************** Result so far: scale 0.062: max_log_p=-4.026, old_max_log_p =-4.043 (thresh=-4.0) 1.00014 0.06110 0.06648 -18.58643; -0.06784 1.11953 0.31968 -13.60183; -0.04975 -0.32146 1.00891 29.99004; 0.00000 0.00000 0.00000 1.00000; **************************************** Nine parameter search. iteration 6 nscales = 2 ... **************************************** Result so far: scale 0.062: max_log_p=-4.023, old_max_log_p =-4.026 (thresh=-4.0) 1.00248 0.06124 0.06664 -18.92267; -0.06800 1.12216 0.32043 -13.96693; -0.04987 -0.32221 1.01128 29.80035; 0.00000 0.00000 0.00000 1.00000; min search scale 0.025000 reached *********************************************** Computing MAP estimate using 3243 samples... *********************************************** dt = 5.00e-06, momentum=0.80, tol=1.00e-05 l_intensity = 1.0000 Aligning input volume to GCA... Transform matrix 1.00248 0.06124 0.06664 -18.92267; -0.06800 1.12216 0.32043 -13.96693; -0.04987 -0.32221 1.01128 29.80035; 0.00000 0.00000 0.00000 1.00000; nsamples 3243 Quasinewton: input matrix 1.00248 0.06124 0.06664 -18.92267; -0.06800 1.12216 0.32043 -13.96693; -0.04987 -0.32221 1.01128 29.80035; 0.00000 0.00000 0.00000 1.00000; outof QuasiNewtonEMA: 009: -log(p) = -0.0 tol 0.000010 Resulting transform: 1.00248 0.06124 0.06664 -18.92267; -0.06800 1.12216 0.32043 -13.96693; -0.04987 -0.32221 1.01128 29.80035; 0.00000 0.00000 0.00000 1.00000; pass 1, spacing 8: log(p) = -4.023 (old=-4.745) transform before final EM align: 1.00248 0.06124 0.06664 -18.92267; -0.06800 1.12216 0.32043 -13.96693; -0.04987 -0.32221 1.01128 29.80035; 0.00000 0.00000 0.00000 1.00000; ************************************************** EM alignment process ... Computing final MAP estimate using 364799 samples. ************************************************** dt = 5.00e-06, momentum=0.80, tol=1.00e-07 l_intensity = 1.0000 Aligning input volume to GCA... Transform matrix 1.00248 0.06124 0.06664 -18.92267; -0.06800 1.12216 0.32043 -13.96693; -0.04987 -0.32221 1.01128 29.80035; 0.00000 0.00000 0.00000 1.00000; nsamples 364799 Quasinewton: input matrix 1.00248 0.06124 0.06664 -18.92267; -0.06800 1.12216 0.32043 -13.96693; -0.04987 -0.32221 1.01128 29.80035; 0.00000 0.00000 0.00000 1.00000; dfp_em_step_func: 010: -log(p) = 4.3 after pass:transform: ( 1.00, 0.06, 0.07, -18.92) ( -0.07, 1.12, 0.32, -13.97) ( -0.05, -0.32, 1.01, 29.80) dfp_em_step_func: 011: -log(p) = 4.3 after pass:transform: ( 1.00, 0.06, 0.07, -18.92) ( -0.07, 1.12, 0.32, -13.97) ( -0.05, -0.32, 1.01, 29.80) dfp_em_step_func: 012: -log(p) = 4.3 after pass:transform: ( 1.00, 0.06, 0.07, -18.92) ( -0.07, 1.12, 0.32, -13.97) ( -0.05, -0.32, 1.01, 29.80) dfp_em_step_func: 013: -log(p) = 4.3 after pass:transform: ( 1.00, 0.06, 0.07, -18.92) ( -0.07, 1.12, 0.32, -13.97) ( -0.05, -0.32, 1.01, 29.80) dfp_em_step_func: 014: -log(p) = 4.3 after pass:transform: ( 1.00, 0.06, 0.07, -18.92) ( -0.07, 1.12, 0.32, -13.97) ( -0.05, -0.32, 1.01, 29.80) dfp_em_step_func: 015: -log(p) = 4.3 after pass:transform: ( 1.00, 0.06, 0.07, -18.92) ( -0.07, 1.12, 0.32, -13.97) ( -0.05, -0.32, 1.01, 29.80) dfp_em_step_func: 016: -log(p) = 4.3 after pass:transform: ( 1.00, 0.06, 0.07, -18.92) ( -0.07, 1.12, 0.32, -13.97) ( -0.05, -0.32, 1.01, 29.80) pass 2 through quasi-newton minimization... outof QuasiNewtonEMA: 018: -log(p) = 4.3 tol 0.000000 final transform: 1.00325 0.06171 0.06726 -18.92267; -0.06760 1.12224 0.32077 -13.96693; -0.04976 -0.32206 1.01132 29.80035; 0.00000 0.00000 0.00000 1.00000; writing output transformation to transforms/talairach_with_skull.lta... mri_em_register utimesec 2013.127313 mri_em_register stimesec 5.783431 mri_em_register ru_maxrss 613980 mri_em_register ru_ixrss 0 mri_em_register ru_idrss 0 mri_em_register ru_isrss 0 mri_em_register ru_minflt 1484178 mri_em_register ru_majflt 0 mri_em_register ru_nswap 0 mri_em_register ru_inblock 0 mri_em_register ru_oublock 32 mri_em_register ru_msgsnd 0 mri_em_register ru_msgrcv 0 mri_em_register ru_nsignals 0 mri_em_register ru_nvcsw 121372 mri_em_register ru_nivcsw 41687 registration took 13 minutes and 18 seconds. mri_watershed -rusage /output/january_2021/subject1/touch/rusage.mri_watershed.dat -T1 -brain_atlas /opt/freesurfer/average/RB_all_withskull_2016-05-10.vc700.gca transforms/talairach_with_skull.lta T1.mgz brainmask.auto.mgz Mode: T1 normalized volume Mode: Use the information of atlas (default parms, --help for details) ********************************************************* The input file is T1.mgz The output file is brainmask.auto.mgz Weighting the input with atlas information before watershed *************************WATERSHED************************** Sorting... first estimation of the COG coord: x=127 y=77 z=126 r=89 first estimation of the main basin volume: 3053433 voxels Looking for seedpoints 2 found in the cerebellum 13 found in the rest of the brain global maximum in x=109, y=81, z=83, Imax=255 CSF=15, WM_intensity=110, WM_VARIANCE=5 WM_MIN=110, WM_HALF_MIN=110, WM_HALF_MAX=110, WM_MAX=110 preflooding height equal to 10 percent done. Analyze... main basin size=375927387 voxels, voxel volume =1.000 = 375927387 mmm3 = 375927.392 cm3 done. PostAnalyze...Basin Prior 223 basins merged thanks to atlas ***** 0 basin(s) merged in 1 iteration(s) ***** 0 voxel(s) added to the main basin done. Weighting the input with prior template ****************TEMPLATE DEFORMATION**************** second estimation of the COG coord: x=129,y=95, z=111, r=8956 iterations ^^^^^^^^ couldn't find WM with original limits - expanding ^^^^^^ GLOBAL CSF_MIN=1, CSF_intensity=2, CSF_MAX=4 , nb = 44505 RIGHT_CER CSF_MIN=1, CSF_intensity=2, CSF_MAX=4 , nb = -1039861288 LEFT_CER CSF_MIN=1, CSF_intensity=2, CSF_MAX=4 , nb = -1054937914 RIGHT_BRAIN CSF_MIN=1, CSF_intensity=2, CSF_MAX=4 , nb = 1051633016 LEFT_BRAIN CSF_MIN=1, CSF_intensity=2, CSF_MAX=4 , nb = 1076429762 OTHER CSF_MIN=4, CSF_intensity=11, CSF_MAX=31 , nb = 1075732422 CSF_MAX TRANSITION GM_MIN GM GLOBAL before analyzing : 4, 4, 4, 88 after analyzing : 4, 18, 25, 35 RIGHT_CER before analyzing : 4, 5, 39, 88 after analyzing : 4, 27, 39, 42 LEFT_CER before analyzing : 4, 8, 22, 28 after analyzing : 4, 19, 25, 21 RIGHT_BRAIN before analyzing : 4, 4, 5, 88 after analyzing : 4, 18, 25, 35 LEFT_BRAIN before analyzing : 4, 3, 3, 88 after analyzing : 3, 17, 25, 34 OTHER before analyzing : 31, 25, 4, 88 after analyzing : 20, 25, 25, 40 mri_strip_skull: done peeling brain highly tesselated surface with 10242 vertices matching...60 iterations *********************VALIDATION********************* curvature mean = -0.013, std = 0.010 curvature mean = 71.514, std = 7.073 No Rigid alignment: -atlas Mode Off (basic atlas / no registration) before rotation: sse = 3.81, sigma = 6.11 after rotation: sse = 3.81, sigma = 6.11 Localization of inacurate regions: Erosion-Dilation steps the sse mean is 4.44, its var is 9.02 before Erosion-Dilatation 1.72% of inacurate vertices after Erosion-Dilatation 0.00% of inacurate vertices Validation of the shape of the surface done. Scaling of atlas fields onto current surface fields ********FINAL ITERATIVE TEMPLATE DEFORMATION******** Compute Local values csf/gray Fine Segmentation...26 iterations mri_strip_skull: done peeling brain Brain Size = 1663862 voxels, voxel volume = 1.000 mm3 = 1663862 mmm3 = 1663.862 cm3 ****************************** Saving brainmask.auto.mgz done mri_watershed utimesec 32.114963 mri_watershed stimesec 0.917913 mri_watershed ru_maxrss 836320 mri_watershed ru_ixrss 0 mri_watershed ru_idrss 0 mri_watershed ru_isrss 0 mri_watershed ru_minflt 518500 mri_watershed ru_majflt 0 mri_watershed ru_nswap 0 mri_watershed ru_inblock 0 mri_watershed ru_oublock 2728 mri_watershed ru_msgsnd 0 mri_watershed ru_msgrcv 0 mri_watershed ru_nsignals 0 mri_watershed ru_nvcsw 3167 mri_watershed ru_nivcsw 946 mri_watershed done cp brainmask.auto.mgz brainmask.mgz #------------------------------------- #@# EM Registration Wed Feb 10 06:45:28 UTC 2021 /output/january_2021/subject1/mri mri_em_register -rusage /output/january_2021/subject1/touch/rusage.mri_em_register.dat -uns 3 -mask brainmask.mgz nu.mgz /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca transforms/talairach.lta setting unknown_nbr_spacing = 3 using MR volume brainmask.mgz to mask input volume... == Number of threads available to mri_em_register for OpenMP = 4 == reading 1 input volumes... logging results to talairach.log reading '/opt/freesurfer/average/RB_all_2016-05-10.vc700.gca'... average std = 7.3 using min determinant for regularization = 5.3 0 singular and 841 ill-conditioned covariance matrices regularized reading 'nu.mgz'... freeing gibbs priors...done. accounting for voxel sizes in initial transform bounding unknown intensity as < 6.3 or > 503.7 total sample mean = 78.8 (1011 zeros) ************************************************ spacing=8, using 2830 sample points, tol=1.00e-05... ************************************************ register_mri: find_optimal_transform find_optimal_transform: nsamples 2830, passno 0, spacing 8 resetting wm mean[0]: 98 --> 107 resetting gm mean[0]: 61 --> 61 input volume #1 is the most T1-like using real data threshold=18.0 skull bounding box = (58, 33, 41) --> (183, 170, 194) using (100, 79, 118) as brain centroid... mean wm in atlas = 107, using box (85,62,99) --> (115, 95,136) to find MRI wm before smoothing, mri peak at 115 robust fit to distribution - 115 +- 5.3 after smoothing, mri peak at 115, scaling input intensities by 0.930 scaling channel 0 by 0.930435 initial log_p = -4.741 ************************************************ First Search limited to translation only. ************************************************ max log p = -4.021941 @ (-9.091, 27.273, -9.091) max log p = -3.905465 @ (4.545, -4.545, -4.545) max log p = -3.865376 @ (2.273, 2.273, 2.273) max log p = -3.841608 @ (-1.136, -1.136, -1.136) max log p = -3.839363 @ (1.705, 0.568, -0.568) max log p = -3.828475 @ (-0.284, 0.284, -0.284) Found translation: (-2.0, 24.7, -13.4): log p = -3.828 **************************************** Nine parameter search. iteration 0 nscales = 0 ... **************************************** Result so far: scale 1.000: max_log_p=-3.777, old_max_log_p =-3.828 (thresh=-3.8) 1.00000 0.00000 0.00000 -1.98864; 0.00000 1.03837 0.27823 -11.96577; 0.00000 -0.25882 0.96593 22.67321; 0.00000 0.00000 0.00000 1.00000; **************************************** Nine parameter search. iteration 1 nscales = 0 ... **************************************** Result so far: scale 1.000: max_log_p=-3.777, old_max_log_p =-3.777 (thresh=-3.8) 1.00000 0.00000 0.00000 -1.98864; 0.00000 1.03837 0.27823 -11.96577; 0.00000 -0.25882 0.96593 22.67321; 0.00000 0.00000 0.00000 1.00000; reducing scale to 0.2500 **************************************** Nine parameter search. iteration 2 nscales = 1 ... **************************************** Result so far: scale 0.250: max_log_p=-3.680, old_max_log_p =-3.777 (thresh=-3.8) 1.01820 -0.00895 0.03340 -9.06946; 0.00000 1.07731 0.28866 -13.13787; -0.03211 -0.26335 0.98283 27.23238; 0.00000 0.00000 0.00000 1.00000; **************************************** Nine parameter search. iteration 3 nscales = 1 ... **************************************** Result so far: scale 0.250: max_log_p=-3.677, old_max_log_p =-3.680 (thresh=-3.7) 0.99850 -0.02646 -0.03962 4.97682; 0.03331 1.07700 0.28750 -17.33354; 0.03456 -0.26337 0.98291 16.64266; 0.00000 0.00000 0.00000 1.00000; reducing scale to 0.0625 **************************************** Nine parameter search. iteration 4 nscales = 2 ... **************************************** Result so far: scale 0.062: max_log_p=-3.644, old_max_log_p =-3.677 (thresh=-3.7) 1.00078 -0.00862 -0.00031 -2.74428; 0.00885 1.07914 0.29667 -15.85156; 0.00173 -0.27149 0.98244 22.61638; 0.00000 0.00000 0.00000 1.00000; **************************************** Nine parameter search. iteration 5 nscales = 2 ... **************************************** Result so far: scale 0.062: max_log_p=-3.636, old_max_log_p =-3.644 (thresh=-3.6) 1.00431 -0.00865 -0.00031 -3.19984; 0.00885 1.07914 0.29667 -15.85156; 0.00173 -0.27149 0.98244 22.61638; 0.00000 0.00000 0.00000 1.00000; **************************************** Nine parameter search. iteration 6 nscales = 2 ... **************************************** Result so far: scale 0.062: max_log_p=-3.636, old_max_log_p =-3.636 (thresh=-3.6) 1.00431 -0.00865 -0.00031 -3.19984; 0.00885 1.07914 0.29667 -15.85156; 0.00173 -0.27149 0.98244 22.61638; 0.00000 0.00000 0.00000 1.00000; min search scale 0.025000 reached *********************************************** Computing MAP estimate using 2830 samples... *********************************************** dt = 5.00e-06, momentum=0.80, tol=1.00e-05 l_intensity = 1.0000 Aligning input volume to GCA... Transform matrix 1.00431 -0.00865 -0.00031 -3.19984; 0.00885 1.07914 0.29667 -15.85156; 0.00173 -0.27149 0.98244 22.61638; 0.00000 0.00000 0.00000 1.00000; nsamples 2830 Quasinewton: input matrix 1.00431 -0.00865 -0.00031 -3.19984; 0.00885 1.07914 0.29667 -15.85156; 0.00173 -0.27149 0.98244 22.61638; 0.00000 0.00000 0.00000 1.00000; outof QuasiNewtonEMA: 009: -log(p) = -0.0 tol 0.000010 Resulting transform: 1.00431 -0.00865 -0.00031 -3.19984; 0.00885 1.07914 0.29667 -15.85156; 0.00173 -0.27149 0.98244 22.61638; 0.00000 0.00000 0.00000 1.00000; pass 1, spacing 8: log(p) = -3.636 (old=-4.741) transform before final EM align: 1.00431 -0.00865 -0.00031 -3.19984; 0.00885 1.07914 0.29667 -15.85156; 0.00173 -0.27149 0.98244 22.61638; 0.00000 0.00000 0.00000 1.00000; ************************************************** EM alignment process ... Computing final MAP estimate using 315557 samples. ************************************************** dt = 5.00e-06, momentum=0.80, tol=1.00e-07 l_intensity = 1.0000 Aligning input volume to GCA... Transform matrix 1.00431 -0.00865 -0.00031 -3.19984; 0.00885 1.07914 0.29667 -15.85156; 0.00173 -0.27149 0.98244 22.61638; 0.00000 0.00000 0.00000 1.00000; nsamples 315557 Quasinewton: input matrix 1.00431 -0.00865 -0.00031 -3.19984; 0.00885 1.07914 0.29667 -15.85156; 0.00173 -0.27149 0.98244 22.61638; 0.00000 0.00000 0.00000 1.00000; outof QuasiNewtonEMA: 011: -log(p) = 4.0 tol 0.000000 final transform: 1.00431 -0.00865 -0.00031 -3.19984; 0.00885 1.07914 0.29667 -15.85156; 0.00173 -0.27149 0.98244 22.61638; 0.00000 0.00000 0.00000 1.00000; writing output transformation to transforms/talairach.lta... mri_em_register utimesec 1855.773026 mri_em_register stimesec 6.082945 mri_em_register ru_maxrss 603208 mri_em_register ru_ixrss 0 mri_em_register ru_idrss 0 mri_em_register ru_isrss 0 mri_em_register ru_minflt 1369030 mri_em_register ru_majflt 0 mri_em_register ru_nswap 0 mri_em_register ru_inblock 0 mri_em_register ru_oublock 24 mri_em_register ru_msgsnd 0 mri_em_register ru_msgrcv 0 mri_em_register ru_nsignals 0 mri_em_register ru_nvcsw 71097 mri_em_register ru_nivcsw 26438 registration took 10 minutes and 16 seconds. #-------------------------------------- #@# CA Normalize Wed Feb 10 06:55:44 UTC 2021 /output/january_2021/subject1/mri mri_ca_normalize -c ctrl_pts.mgz -mask brainmask.mgz nu.mgz /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca transforms/talairach.lta norm.mgz writing control point volume to ctrl_pts.mgz using MR volume brainmask.mgz to mask input volume... reading 1 input volume reading atlas from '/opt/freesurfer/average/RB_all_2016-05-10.vc700.gca'... reading transform from 'transforms/talairach.lta'... reading input volume from nu.mgz... resetting wm mean[0]: 98 --> 107 resetting gm mean[0]: 61 --> 61 input volume #1 is the most T1-like using real data threshold=18.0 skull bounding box = (58, 33, 41) --> (183, 170, 194) using (100, 79, 118) as brain centroid... mean wm in atlas = 107, using box (85,62,99) --> (115, 95,136) to find MRI wm before smoothing, mri peak at 115 robust fit to distribution - 115 +- 5.3 after smoothing, mri peak at 115, scaling input intensities by 0.930 scaling channel 0 by 0.930435 using 246344 sample points... INFO: compute sample coordinates transform 1.00431 -0.00865 -0.00031 -3.19984; 0.00885 1.07914 0.29667 -15.85156; 0.00173 -0.27149 0.98244 22.61638; 0.00000 0.00000 0.00000 1.00000; INFO: transform used finding control points in Left_Cerebral_White_Matter.... found 39915 control points for structure... bounding box (130, 34, 36) --> (195, 141, 197) Left_Cerebral_White_Matter: limiting intensities to 88.0 --> 132.0 0 of 2113 (0.0%) samples deleted finding control points in Right_Cerebral_White_Matter.... found 39557 control points for structure... bounding box (66, 34, 35) --> (131, 135, 197) Right_Cerebral_White_Matter: limiting intensities to 88.0 --> 132.0 1 of 2404 (0.0%) samples deleted finding control points in Left_Cerebellum_White_Matter.... found 3059 control points for structure... bounding box (132, 118, 65) --> (180, 156, 118) Left_Cerebellum_White_Matter: limiting intensities to 129.0 --> 132.0 9 of 9 (100.0%) samples deleted finding control points in Right_Cerebellum_White_Matter.... found 2705 control points for structure... bounding box (86, 118, 63) --> (130, 155, 118) Right_Cerebellum_White_Matter: limiting intensities to 88.0 --> 132.0 0 of 9 (0.0%) samples deleted finding control points in Brain_Stem.... found 3518 control points for structure... bounding box (114, 104, 100) --> (148, 167, 129) Brain_Stem: limiting intensities to 88.0 --> 132.0 9 of 9 (100.0%) samples deleted using 4544 total control points for intensity normalization... bias field = 1.020 +- 0.046 1 of 4525 control points discarded finding control points in Left_Cerebral_White_Matter.... found 39915 control points for structure... bounding box (130, 34, 36) --> (195, 141, 197) Left_Cerebral_White_Matter: limiting intensities to 88.0 --> 132.0 301 of 2224 (13.5%) samples deleted finding control points in Right_Cerebral_White_Matter.... found 39557 control points for structure... bounding box (66, 34, 35) --> (131, 135, 197) Right_Cerebral_White_Matter: limiting intensities to 88.0 --> 132.0 19 of 2598 (0.7%) samples deleted finding control points in Left_Cerebellum_White_Matter.... found 3059 control points for structure... bounding box (132, 118, 65) --> (180, 156, 118) Left_Cerebellum_White_Matter: limiting intensities to 153.0 --> 132.0 52 of 52 (100.0%) samples deleted finding control points in Right_Cerebellum_White_Matter.... found 2705 control points for structure... bounding box (86, 118, 63) --> (130, 155, 118) Right_Cerebellum_White_Matter: limiting intensities to 88.0 --> 132.0 41 of 68 (60.3%) samples deleted finding control points in Brain_Stem.... found 3518 control points for structure... bounding box (114, 104, 100) --> (148, 167, 129) Brain_Stem: limiting intensities to 88.0 --> 132.0 106 of 110 (96.4%) samples deleted using 5052 total control points for intensity normalization... bias field = 1.005 +- 0.046 1 of 4506 control points discarded finding control points in Left_Cerebral_White_Matter.... found 39915 control points for structure... bounding box (130, 34, 36) --> (195, 141, 197) Left_Cerebral_White_Matter: limiting intensities to 88.0 --> 122.0 277 of 2224 (12.5%) samples deleted finding control points in Right_Cerebral_White_Matter.... found 39557 control points for structure... bounding box (66, 34, 35) --> (131, 135, 197) Right_Cerebral_White_Matter: limiting intensities to 88.0 --> 132.0 48 of 2866 (1.7%) samples deleted finding control points in Left_Cerebellum_White_Matter.... found 3059 control points for structure... bounding box (132, 118, 65) --> (180, 156, 118) Left_Cerebellum_White_Matter: limiting intensities to 130.0 --> 132.0 63 of 63 (100.0%) samples deleted finding control points in Right_Cerebellum_White_Matter.... found 2705 control points for structure... bounding box (86, 118, 63) --> (130, 155, 118) Right_Cerebellum_White_Matter: limiting intensities to 97.0 --> 132.0 61 of 67 (91.0%) samples deleted finding control points in Brain_Stem.... found 3518 control points for structure... bounding box (114, 104, 100) --> (148, 167, 129) Brain_Stem: limiting intensities to 88.0 --> 132.0 112 of 115 (97.4%) samples deleted using 5335 total control points for intensity normalization... bias field = 0.999 +- 0.045 2 of 4705 control points discarded writing normalized volume to norm.mgz... writing control points to ctrl_pts.mgz freeing GCA...done. normalization took 1 minutes and 54 seconds. #-------------------------------------- #@# CA Reg Wed Feb 10 06:57:38 UTC 2021 /output/january_2021/subject1/mri mri_ca_register -rusage /output/january_2021/subject1/touch/rusage.mri_ca_register.dat -nobigventricles -T transforms/talairach.lta -align-after -mask brainmask.mgz norm.mgz /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca transforms/talairach.m3z not handling expanded ventricles... using previously computed transform transforms/talairach.lta renormalizing sequences with structure alignment, equivalent to: -renormalize -regularize_mean 0.500 -regularize 0.500 using MR volume brainmask.mgz to mask input volume... == Number of threads available to mri_ca_register for OpenMP = 4 == reading 1 input volumes... logging results to talairach.log reading input volume 'norm.mgz'... reading GCA '/opt/freesurfer/average/RB_all_2016-05-10.vc700.gca'... label assignment complete, 0 changed (0.00%) det(m_affine) = 1.15 (predicted orig area = 7.0) label assignment complete, 0 changed (0.00%) freeing gibbs priors...done. average std[0] = 5.0 **************** pass 1 of 1 ************************ enabling zero nodes setting smoothness coefficient to 0.039 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.953, neg=0, invalid=762 0001: dt=222.879469, rms=0.893 (6.341%), neg=0, invalid=762 0002: dt=422.459694, rms=0.862 (3.454%), neg=0, invalid=762 0003: dt=168.787565, rms=0.851 (1.297%), neg=0, invalid=762 0004: dt=517.888000, rms=0.839 (1.361%), neg=0, invalid=762 0005: dt=148.622222, rms=0.835 (0.526%), neg=0, invalid=762 0006: dt=1479.680000, rms=0.821 (1.621%), neg=0, invalid=762 0007: dt=129.472000, rms=0.817 (0.495%), neg=0, invalid=762 0008: dt=517.888000, rms=0.814 (0.363%), neg=0, invalid=762 0009: dt=887.808000, rms=0.809 (0.636%), neg=0, invalid=762 0010: dt=129.472000, rms=0.807 (0.202%), neg=0, invalid=762 0011: dt=129.472000, rms=0.807 (0.057%), neg=0, invalid=762 0012: dt=129.472000, rms=0.806 (0.077%), neg=0, invalid=762 0013: dt=129.472000, rms=0.805 (0.129%), neg=0, invalid=762 0014: dt=129.472000, rms=0.803 (0.210%), neg=0, invalid=762 0015: dt=129.472000, rms=0.801 (0.260%), neg=0, invalid=762 0016: dt=129.472000, rms=0.799 (0.264%), neg=0, invalid=762 0017: dt=129.472000, rms=0.797 (0.266%), neg=0, invalid=762 0018: dt=129.472000, rms=0.795 (0.269%), neg=0, invalid=762 0019: dt=129.472000, rms=0.793 (0.222%), neg=0, invalid=762 0020: dt=129.472000, rms=0.792 (0.193%), neg=0, invalid=762 0021: dt=129.472000, rms=0.790 (0.189%), neg=0, invalid=762 0022: dt=129.472000, rms=0.788 (0.212%), neg=0, invalid=762 0023: dt=129.472000, rms=0.787 (0.229%), neg=0, invalid=762 0024: dt=129.472000, rms=0.785 (0.245%), neg=0, invalid=762 0025: dt=129.472000, rms=0.783 (0.221%), neg=0, invalid=762 0026: dt=129.472000, rms=0.782 (0.176%), neg=0, invalid=762 0027: dt=129.472000, rms=0.781 (0.125%), neg=0, invalid=762 0028: dt=129.472000, rms=0.780 (0.093%), neg=0, invalid=762 0029: dt=887.808000, rms=0.779 (0.119%), neg=0, invalid=762 0030: dt=369.920000, rms=0.778 (0.092%), neg=0, invalid=762 0031: dt=369.920000, rms=0.778 (-0.004%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.780, neg=0, invalid=762 0032: dt=295.936000, rms=0.777 (0.416%), neg=0, invalid=762 0033: dt=129.472000, rms=0.776 (0.053%), neg=0, invalid=762 0034: dt=129.472000, rms=0.776 (0.035%), neg=0, invalid=762 0035: dt=129.472000, rms=0.776 (0.034%), neg=0, invalid=762 0036: dt=129.472000, rms=0.776 (0.047%), neg=0, invalid=762 0037: dt=129.472000, rms=0.775 (0.025%), neg=0, invalid=762 0038: dt=1479.680000, rms=0.775 (0.112%), neg=0, invalid=762 0039: dt=129.472000, rms=0.774 (0.048%), neg=0, invalid=762 setting smoothness coefficient to 0.154 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.791, neg=0, invalid=762 0040: dt=208.108844, rms=0.771 (2.440%), neg=0, invalid=762 0041: dt=36.288000, rms=0.763 (1.032%), neg=0, invalid=762 0042: dt=31.104000, rms=0.760 (0.482%), neg=0, invalid=762 0043: dt=0.567000, rms=0.760 (0.018%), neg=0, invalid=762 0044: dt=0.141750, rms=0.760 (0.002%), neg=0, invalid=762 0045: dt=0.008859, rms=0.760 (0.000%), neg=0, invalid=762 0046: dt=0.001107, rms=0.760 (0.000%), neg=0, invalid=762 0047: dt=0.000000, rms=0.760 (0.000%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.761, neg=0, invalid=762 0048: dt=160.706625, rms=0.752 (1.270%), neg=0, invalid=762 0049: dt=134.918919, rms=0.747 (0.634%), neg=0, invalid=762 0050: dt=73.632990, rms=0.744 (0.450%), neg=0, invalid=762 0051: dt=84.389381, rms=0.741 (0.331%), neg=0, invalid=762 0052: dt=62.208000, rms=0.739 (0.291%), neg=0, invalid=762 0053: dt=124.416000, rms=0.737 (0.309%), neg=0, invalid=762 0054: dt=36.288000, rms=0.735 (0.260%), neg=0, invalid=762 0055: dt=580.608000, rms=0.728 (0.940%), neg=0, invalid=762 0056: dt=36.288000, rms=0.724 (0.589%), neg=0, invalid=762 0057: dt=36.288000, rms=0.722 (0.176%), neg=0, invalid=762 0058: dt=36.288000, rms=0.722 (0.071%), neg=0, invalid=762 0059: dt=36.288000, rms=0.721 (0.119%), neg=0, invalid=762 0060: dt=36.288000, rms=0.720 (0.151%), neg=0, invalid=762 0061: dt=36.288000, rms=0.719 (0.186%), neg=0, invalid=762 0062: dt=36.288000, rms=0.717 (0.219%), neg=0, invalid=762 0063: dt=36.288000, rms=0.715 (0.230%), neg=0, invalid=762 0064: dt=36.288000, rms=0.714 (0.252%), neg=0, invalid=762 0065: dt=36.288000, rms=0.712 (0.268%), neg=0, invalid=762 0066: dt=36.288000, rms=0.710 (0.275%), neg=0, invalid=762 0067: dt=36.288000, rms=0.709 (0.061%), neg=0, invalid=762 0068: dt=36.288000, rms=0.709 (0.083%), neg=0, invalid=762 0069: dt=36.288000, rms=0.708 (0.031%), neg=0, invalid=762 0070: dt=580.608000, rms=0.707 (0.152%), neg=0, invalid=762 0071: dt=124.416000, rms=0.707 (0.093%), neg=0, invalid=762 0072: dt=124.416000, rms=0.705 (0.248%), neg=0, invalid=762 0073: dt=124.416000, rms=0.704 (0.123%), neg=0, invalid=762 0074: dt=124.416000, rms=0.704 (-0.137%), neg=0, invalid=762 0075: dt=36.288000, rms=0.703 (0.089%), neg=0, invalid=762 0076: dt=82.944000, rms=0.703 (0.020%), neg=0, invalid=762 setting smoothness coefficient to 0.588 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.748, neg=0, invalid=762 0077: dt=11.200000, rms=0.745 (0.481%), neg=0, invalid=762 0078: dt=11.200000, rms=0.743 (0.201%), neg=0, invalid=762 0079: dt=11.200000, rms=0.742 (0.153%), neg=0, invalid=762 0080: dt=11.200000, rms=0.741 (0.187%), neg=0, invalid=762 0081: dt=11.200000, rms=0.740 (0.112%), neg=0, invalid=762 0082: dt=11.200000, rms=0.739 (0.116%), neg=0, invalid=762 0083: dt=11.200000, rms=0.736 (0.381%), neg=0, invalid=762 0084: dt=11.200000, rms=0.732 (0.548%), neg=0, invalid=762 0085: dt=11.200000, rms=0.731 (0.128%), neg=0, invalid=762 0086: dt=11.200000, rms=0.730 (0.201%), neg=0, invalid=762 0087: dt=11.200000, rms=0.728 (0.247%), neg=0, invalid=762 0088: dt=11.200000, rms=0.728 (0.068%), neg=0, invalid=762 0089: dt=11.200000, rms=0.727 (0.126%), neg=0, invalid=762 0090: dt=11.200000, rms=0.725 (0.173%), neg=0, invalid=762 0091: dt=11.200000, rms=0.725 (0.036%), neg=0, invalid=762 0092: dt=11.200000, rms=0.725 (0.056%), neg=0, invalid=762 0093: dt=11.200000, rms=0.724 (0.052%), neg=0, invalid=762 0094: dt=11.200000, rms=0.724 (0.052%), neg=0, invalid=762 0095: dt=2.800000, rms=0.724 (0.008%), neg=0, invalid=762 0096: dt=2.800000, rms=0.724 (0.010%), neg=0, invalid=762 0097: dt=0.002734, rms=0.724 (0.000%), neg=0, invalid=762 0098: dt=0.001367, rms=0.724 (0.000%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.725, neg=0, invalid=762 0099: dt=0.000000, rms=0.724 (0.223%), neg=0, invalid=762 0100: dt=0.000000, rms=0.724 (0.000%), neg=0, invalid=762 setting smoothness coefficient to 2.000 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.803, neg=0, invalid=762 0101: dt=0.720000, rms=0.801 (0.209%), neg=0, invalid=762 0102: dt=0.216000, rms=0.801 (0.003%), neg=0, invalid=762 0103: dt=0.216000, rms=0.801 (-0.002%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.803, neg=0, invalid=762 0104: dt=0.252000, rms=0.801 (0.189%), neg=0, invalid=762 0105: dt=0.180000, rms=0.801 (0.002%), neg=0, invalid=762 0106: dt=0.180000, rms=0.801 (-0.002%), neg=0, invalid=762 setting smoothness coefficient to 5.000 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.933, neg=0, invalid=762 0107: dt=1.792000, rms=0.917 (1.737%), neg=0, invalid=762 0108: dt=1.792000, rms=0.908 (0.998%), neg=0, invalid=762 0109: dt=1.280000, rms=0.903 (0.527%), neg=0, invalid=762 0110: dt=1.280000, rms=0.900 (0.367%), neg=0, invalid=762 0111: dt=1.536000, rms=0.896 (0.414%), neg=0, invalid=762 0112: dt=1.024000, rms=0.894 (0.219%), neg=0, invalid=762 0113: dt=1.024000, rms=0.892 (0.249%), neg=0, invalid=762 0114: dt=1.024000, rms=0.890 (0.281%), neg=0, invalid=762 0115: dt=1.024000, rms=0.887 (0.270%), neg=0, invalid=762 0116: dt=1.024000, rms=0.886 (0.144%), neg=0, invalid=762 0117: dt=1.024000, rms=0.885 (0.122%), neg=0, invalid=762 0118: dt=1.024000, rms=0.884 (0.057%), neg=0, invalid=762 0119: dt=1.792000, rms=0.882 (0.268%), neg=0, invalid=762 0120: dt=1.536000, rms=0.880 (0.262%), neg=0, invalid=762 0121: dt=0.448000, rms=0.879 (0.100%), neg=0, invalid=762 0122: dt=0.448000, rms=0.878 (0.046%), neg=0, invalid=762 0123: dt=0.448000, rms=0.878 (0.077%), neg=0, invalid=762 0124: dt=0.448000, rms=0.877 (0.105%), neg=0, invalid=762 0125: dt=0.448000, rms=0.875 (0.143%), neg=0, invalid=762 0126: dt=0.448000, rms=0.874 (0.162%), neg=0, invalid=762 0127: dt=0.448000, rms=0.873 (0.154%), neg=0, invalid=762 0128: dt=0.448000, rms=0.871 (0.145%), neg=0, invalid=762 0129: dt=0.448000, rms=0.870 (0.136%), neg=0, invalid=762 0130: dt=0.448000, rms=0.869 (0.115%), neg=0, invalid=762 0131: dt=0.448000, rms=0.869 (0.086%), neg=0, invalid=762 0132: dt=0.448000, rms=0.868 (0.002%), neg=0, invalid=762 0133: dt=0.448000, rms=0.868 (0.002%), neg=0, invalid=762 0134: dt=0.448000, rms=0.868 (0.004%), neg=0, invalid=762 0135: dt=0.448000, rms=0.868 (0.005%), neg=0, invalid=762 0136: dt=0.448000, rms=0.868 (0.012%), neg=0, invalid=762 0137: dt=0.448000, rms=0.868 (0.018%), neg=0, invalid=762 0138: dt=0.448000, rms=0.868 (0.021%), neg=0, invalid=762 0139: dt=0.448000, rms=0.868 (0.026%), neg=0, invalid=762 0140: dt=0.448000, rms=0.867 (0.029%), neg=0, invalid=762 0141: dt=0.448000, rms=0.867 (0.028%), neg=0, invalid=762 0142: dt=0.448000, rms=0.867 (0.032%), neg=0, invalid=762 0143: dt=0.448000, rms=0.867 (0.032%), neg=0, invalid=762 0144: dt=0.448000, rms=0.866 (0.031%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.868, neg=0, invalid=762 0145: dt=1.280000, rms=0.866 (0.240%), neg=0, invalid=762 0146: dt=0.000000, rms=0.866 (-0.001%), neg=0, invalid=762 resetting metric properties... setting smoothness coefficient to 10.000 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.844, neg=0, invalid=762 0147: dt=0.955722, rms=0.823 (2.540%), neg=0, invalid=762 0148: dt=0.112000, rms=0.821 (0.183%), neg=0, invalid=762 0149: dt=0.112000, rms=0.821 (-0.065%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.822, neg=0, invalid=762 0150: dt=0.064000, rms=0.821 (0.192%), neg=0, invalid=762 0151: dt=0.001000, rms=0.821 (0.001%), neg=0, invalid=762 0152: dt=0.001000, rms=0.821 (-0.000%), neg=0, invalid=762 renormalizing by structure alignment.... renormalizing input #0 gca peak = 0.10027 (20) mri peak = 0.11946 (23) Left_Lateral_Ventricle (4): linear fit = 1.10 x + 0.0 (2344 voxels, overlap=0.590) Left_Lateral_Ventricle (4): linear fit = 1.10 x + 0.0 (2344 voxels, peak = 22), gca=21.9 gca peak = 0.15565 (16) mri peak = 0.07814 (25) Right_Lateral_Ventricle (43): linear fit = 1.36 x + 0.0 (1575 voxels, overlap=0.700) Right_Lateral_Ventricle (43): linear fit = 1.36 x + 0.0 (1575 voxels, peak = 22), gca=21.7 gca peak = 0.26829 (96) mri peak = 0.12881 (76) Right_Pallidum (52): linear fit = 0.80 x + 0.0 (1058 voxels, overlap=0.023) Right_Pallidum (52): linear fit = 0.80 x + 0.0 (1058 voxels, peak = 76), gca=76.3 gca peak = 0.20183 (93) mri peak = 0.16335 (75) Left_Pallidum: unreasonable value (74.9/75.0), not in range [75, 135] - rejecting gca peak = 0.21683 (55) mri peak = 0.17694 (51) Right_Hippocampus: unreasonable value (49.2/51.0), not in range [50, 90] - rejecting gca peak = 0.30730 (58) mri peak = 0.07591 (56) Left_Hippocampus (17): linear fit = 0.96 x + 0.0 (831 voxels, overlap=0.975) Left_Hippocampus (17): linear fit = 0.96 x + 0.0 (831 voxels, peak = 56), gca=56.0 gca peak = 0.11430 (101) mri peak = 0.07248 (109) Right_Cerebral_White_Matter (41): linear fit = 1.07 x + 0.0 (73986 voxels, overlap=0.687) Right_Cerebral_White_Matter (41): linear fit = 1.07 x + 0.0 (73986 voxels, peak = 108), gca=107.6 gca peak = 0.12076 (102) mri peak = 0.06676 (108) Left_Cerebral_White_Matter (2): linear fit = 1.09 x + 0.0 (76827 voxels, overlap=0.587) Left_Cerebral_White_Matter (2): linear fit = 1.09 x + 0.0 (76827 voxels, peak = 111), gca=110.7 gca peak = 0.14995 (59) mri peak = 0.03808 (86) Left_Cerebral_Cortex (3): linear fit = 1.47 x + 0.0 (25134 voxels, overlap=0.000) Left_Cerebral_Cortex (3): linear fit = 1.47 x + 0.0 (25134 voxels, peak = 86), gca=86.4 gca peak = 0.15082 (58) mri peak = 0.03553 (83) Right_Cerebral_Cortex (42): linear fit = 1.50 x + 0.0 (29117 voxels, overlap=0.000) Right_Cerebral_Cortex (42): linear fit = 1.50 x + 0.0 (29117 voxels, peak = 87), gca=86.7 gca peak = 0.14161 (67) mri peak = 0.09642 (86) Right_Caudate (50): linear fit = 1.36 x + 0.0 (761 voxels, overlap=0.018) Right_Caudate (50): linear fit = 1.36 x + 0.0 (761 voxels, peak = 91), gca=90.8 gca peak = 0.15243 (71) mri peak = 0.11800 (98) Left_Caudate (11): linear fit = 1.27 x + 0.0 (1062 voxels, overlap=0.016) Left_Caudate (11): linear fit = 1.27 x + 0.0 (1062 voxels, peak = 91), gca=90.5 gca peak = 0.13336 (57) mri peak = 0.02964 (55) Left_Cerebellum_Cortex (8): linear fit = 1.04 x + 0.0 (16687 voxels, overlap=0.559) Left_Cerebellum_Cortex (8): linear fit = 1.04 x + 0.0 (16687 voxels, peak = 60), gca=59.6 gca peak = 0.13252 (56) mri peak = 0.03365 (53) Right_Cerebellum_Cortex (47): linear fit = 1.04 x + 0.0 (26619 voxels, overlap=0.943) Right_Cerebellum_Cortex (47): linear fit = 1.04 x + 0.0 (26619 voxels, peak = 59), gca=58.5 gca peak = 0.18181 (84) mri peak = 0.02680 (78) Left_Cerebellum_White_Matter (7): linear fit = 0.93 x + 0.0 (7521 voxels, overlap=0.050) Left_Cerebellum_White_Matter (7): linear fit = 0.93 x + 0.0 (7521 voxels, peak = 78), gca=77.7 gca peak = 0.20573 (83) mri peak = 0.04749 (75) Right_Cerebellum_White_Matter (46): linear fit = 0.94 x + 0.0 (8075 voxels, overlap=0.880) Right_Cerebellum_White_Matter (46): linear fit = 0.94 x + 0.0 (8075 voxels, peak = 78), gca=77.6 gca peak = 0.21969 (57) mri peak = 0.15948 (56) Left_Amygdala (18): linear fit = 0.99 x + 0.0 (391 voxels, overlap=0.996) Left_Amygdala (18): linear fit = 0.99 x + 0.0 (391 voxels, peak = 56), gca=56.1 gca peak = 0.39313 (56) mri peak = 0.32776 (51) Right_Amygdala: unreasonable value (49.6/51.0), not in range [50, 90] - rejecting gca peak = 0.14181 (85) mri peak = 0.10381 (75) Left_Thalamus_Proper (10): linear fit = 0.92 x + 0.0 (5154 voxels, overlap=0.582) Left_Thalamus_Proper (10): linear fit = 0.92 x + 0.0 (5154 voxels, peak = 78), gca=77.8 gca peak = 0.11978 (83) mri peak = 0.16592 (75) Right_Thalamus_Proper (49): linear fit = 0.95 x + 0.0 (3992 voxels, overlap=0.450) Right_Thalamus_Proper (49): linear fit = 0.95 x + 0.0 (3992 voxels, peak = 79), gca=79.3 gca peak = 0.13399 (79) mri peak = 0.04724 (72) Left_Putamen (12): linear fit = 0.82 x + 0.0 (2694 voxels, overlap=0.881) Left_Putamen (12): linear fit = 0.82 x + 0.0 (2694 voxels, peak = 65), gca=65.2 gca peak = 0.14159 (79) mri peak = 0.05479 (81) Right_Putamen (51): linear fit = 1.01 x + 0.0 (2642 voxels, overlap=0.924) Right_Putamen (51): linear fit = 1.01 x + 0.0 (2642 voxels, peak = 80), gca=80.2 gca peak = 0.10025 (80) mri peak = 0.19336 (80) Brain_Stem (16): linear fit = 1.05 x + 0.0 (12426 voxels, overlap=0.401) Brain_Stem (16): linear fit = 1.05 x + 0.0 (12426 voxels, peak = 84), gca=84.4 gca peak = 0.13281 (86) uniform distribution in MR - rejecting arbitrary fit gca peak = 0.12801 (89) mri peak = 0.47059 (81) Left_VentralDC (28): linear fit = 0.93 x + 0.0 (1721 voxels, overlap=0.315) Left_VentralDC (28): linear fit = 0.93 x + 0.0 (1721 voxels, peak = 82), gca=82.3 gca peak = 0.20494 (23) mri peak = 0.40000 ( 5) gca peak = 0.15061 (21) mri peak = 0.15016 ( 8) Fourth_Ventricle (15): linear fit = 0.44 x + 0.0 (237 voxels, overlap=0.224) Fourth_Ventricle (15): linear fit = 0.44 x + 0.0 (237 voxels, peak = 9), gca=9.1 gca peak Unknown = 0.94835 ( 0) gca peak Left_Inf_Lat_Vent = 0.18056 (32) gca peak Left_Thalamus = 0.64095 (94) gca peak Left_Pallidum = 0.20183 (93) gca peak Third_Ventricle = 0.20494 (23) gca peak Fourth_Ventricle = 0.15061 (21) gca peak CSF = 0.20999 (34) gca peak Left_Accumbens_area = 0.39030 (62) gca peak Left_undetermined = 0.95280 (25) gca peak Left_vessel = 0.67734 (53) gca peak Left_choroid_plexus = 0.09433 (44) gca peak Right_Inf_Lat_Vent = 0.23544 (26) gca peak Right_Hippocampus = 0.21683 (55) gca peak Right_Amygdala = 0.39313 (56) gca peak Right_Accumbens_area = 0.30312 (64) gca peak Right_VentralDC = 0.13281 (86) gca peak Right_vessel = 0.46315 (51) gca peak Right_choroid_plexus = 0.14086 (44) gca peak Fifth_Ventricle = 0.51669 (36) gca peak WM_hypointensities = 0.09722 (76) gca peak non_WM_hypointensities = 0.11899 (47) gca peak Optic_Chiasm = 0.39033 (72) label assignment complete, 0 changed (0.00%) not using caudate to estimate GM means setting label Right_Hippocampus based on Left_Hippocampus = 0.96 x + 0: 56 setting label Right_Amygdala based on Left_Amygdala = 0.99 x + 0: 56 setting label Left_Pallidum based on Right_Pallidum = 0.80 x + 0: 76 setting label Right_VentralDC based on Left_VentralDC = 0.93 x + 0: 82 estimating mean gm scale to be 1.14 x + 0.0 estimating mean wm scale to be 1.08 x + 0.0 estimating mean csf scale to be 1.23 x + 0.0 saving intensity scales to talairach.label_intensities.txt **************** pass 1 of 1 ************************ enabling zero nodes setting smoothness coefficient to 0.008 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.924, neg=0, invalid=762 0153: dt=135.430712, rms=0.882 (4.574%), neg=0, invalid=762 0154: dt=369.920000, rms=0.867 (1.600%), neg=0, invalid=762 0155: dt=517.888000, rms=0.858 (1.146%), neg=0, invalid=762 0156: dt=110.976000, rms=0.854 (0.391%), neg=0, invalid=762 0157: dt=517.888000, rms=0.851 (0.430%), neg=0, invalid=762 0158: dt=443.904000, rms=0.843 (0.920%), neg=0, invalid=762 0159: dt=92.480000, rms=0.841 (0.142%), neg=0, invalid=762 0160: dt=129.472000, rms=0.841 (0.090%), neg=0, invalid=762 0161: dt=1479.680000, rms=0.831 (1.195%), neg=0, invalid=762 0162: dt=8.092000, rms=0.831 (0.012%), neg=0, invalid=762 0163: dt=2.023000, rms=0.831 (-0.002%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.833, neg=0, invalid=762 0164: dt=8.092000, rms=0.830 (0.269%), neg=0, invalid=762 0165: dt=2.023000, rms=0.830 (0.008%), neg=0, invalid=762 0166: dt=0.505750, rms=0.830 (0.002%), neg=0, invalid=762 0167: dt=0.063219, rms=0.830 (0.000%), neg=0, invalid=762 0168: dt=0.031609, rms=0.830 (0.000%), neg=0, invalid=762 0169: dt=0.007902, rms=0.830 (0.000%), neg=0, invalid=762 setting smoothness coefficient to 0.031 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.833, neg=0, invalid=762 0170: dt=0.000000, rms=0.831 (0.233%), neg=0, invalid=762 0171: dt=0.000000, rms=0.831 (0.000%), neg=0, invalid=762 0172: dt=0.000110, rms=0.831 (0.000%), neg=0, invalid=762 0173: dt=0.000001, rms=0.831 (0.000%), neg=0, invalid=762 0174: dt=0.000000, rms=0.831 (0.000%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.833, neg=0, invalid=762 0175: dt=0.000000, rms=0.831 (0.233%), neg=0, invalid=762 0176: dt=0.000000, rms=0.831 (0.000%), neg=0, invalid=762 0177: dt=0.000000, rms=0.831 (0.000%), neg=0, invalid=762 0178: dt=0.000000, rms=0.831 (-0.000%), neg=0, invalid=762 setting smoothness coefficient to 0.118 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.838, neg=0, invalid=762 0179: dt=0.000000, rms=0.836 (0.230%), neg=0, invalid=762 0180: dt=0.000000, rms=0.836 (0.000%), neg=0, invalid=762 0181: dt=0.000000, rms=0.836 (0.000%), neg=0, invalid=762 0182: dt=0.000000, rms=0.836 (0.000%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.838, neg=0, invalid=762 0183: dt=0.000000, rms=0.836 (0.230%), neg=0, invalid=762 0184: dt=0.000000, rms=0.836 (0.000%), neg=0, invalid=762 0185: dt=0.000000, rms=0.836 (0.000%), neg=0, invalid=762 0186: dt=0.000000, rms=0.836 (0.000%), neg=0, invalid=762 setting smoothness coefficient to 0.400 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.853, neg=0, invalid=762 0187: dt=0.000000, rms=0.851 (0.223%), neg=0, invalid=762 0188: dt=0.000000, rms=0.851 (0.000%), neg=0, invalid=762 0189: dt=0.000000, rms=0.851 (-0.000%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.853, neg=0, invalid=762 0190: dt=0.000000, rms=0.851 (0.223%), neg=0, invalid=762 0191: dt=0.000000, rms=0.851 (0.000%), neg=0, invalid=762 0192: dt=0.000000, rms=0.851 (0.000%), neg=0, invalid=762 0193: dt=0.000000, rms=0.851 (0.000%), neg=0, invalid=762 setting smoothness coefficient to 1.000 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.883, neg=0, invalid=762 0194: dt=1.792000, rms=0.847 (4.112%), neg=0, invalid=762 0195: dt=1.792000, rms=0.822 (2.874%), neg=0, invalid=762 0196: dt=1.792000, rms=0.806 (1.970%), neg=0, invalid=762 0197: dt=1.792000, rms=0.795 (1.333%), neg=0, invalid=762 0198: dt=1.792000, rms=0.788 (0.955%), neg=0, invalid=762 0199: dt=1.792000, rms=0.782 (0.705%), neg=0, invalid=762 0200: dt=1.792000, rms=0.778 (0.541%), neg=0, invalid=762 0201: dt=1.792000, rms=0.775 (0.435%), neg=0, invalid=762 0202: dt=1.792000, rms=0.772 (0.361%), neg=0, invalid=762 0203: dt=1.792000, rms=0.769 (0.314%), neg=0, invalid=762 0204: dt=1.792000, rms=0.767 (0.266%), neg=0, invalid=762 0205: dt=1.792000, rms=0.766 (0.229%), neg=0, invalid=762 0206: dt=1.792000, rms=0.764 (0.208%), neg=0, invalid=762 0207: dt=1.792000, rms=0.763 (0.185%), neg=0, invalid=762 0208: dt=1.792000, rms=0.761 (0.171%), neg=0, invalid=762 0209: dt=2.000000, rms=0.760 (0.169%), neg=0, invalid=762 0210: dt=1.792000, rms=0.759 (0.136%), neg=0, invalid=762 0211: dt=1.792000, rms=0.758 (0.124%), neg=0, invalid=762 0212: dt=1.792000, rms=0.757 (0.122%), neg=0, invalid=762 0213: dt=1.792000, rms=0.756 (0.111%), neg=0, invalid=762 0214: dt=1.792000, rms=0.755 (0.103%), neg=0, invalid=762 0215: dt=1.792000, rms=0.755 (0.091%), neg=0, invalid=762 0216: dt=1.792000, rms=0.754 (0.095%), neg=0, invalid=762 0217: dt=1.792000, rms=0.753 (0.077%), neg=0, invalid=762 0218: dt=1.792000, rms=0.753 (0.078%), neg=0, invalid=762 0219: dt=1.792000, rms=0.752 (0.075%), neg=0, invalid=762 0220: dt=1.792000, rms=0.752 (0.067%), neg=0, invalid=762 0221: dt=1.792000, rms=0.751 (0.064%), neg=0, invalid=762 0222: dt=1.792000, rms=0.751 (0.059%), neg=0, invalid=762 0223: dt=1.792000, rms=0.750 (0.061%), neg=0, invalid=762 0224: dt=1.792000, rms=0.750 (0.050%), neg=0, invalid=762 0225: dt=1.792000, rms=0.750 (0.056%), neg=0, invalid=762 0226: dt=1.792000, rms=0.749 (0.100%), neg=0, invalid=762 0227: dt=1.792000, rms=0.748 (0.130%), neg=0, invalid=762 0228: dt=1.792000, rms=0.747 (0.160%), neg=0, invalid=762 0229: dt=1.792000, rms=0.745 (0.166%), neg=0, invalid=762 0230: dt=1.792000, rms=0.744 (0.164%), neg=0, invalid=762 0231: dt=1.792000, rms=0.743 (0.130%), neg=0, invalid=762 0232: dt=1.792000, rms=0.743 (-0.014%), neg=0, invalid=762 0233: dt=0.000000, rms=0.743 (0.000%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.745, neg=0, invalid=762 0234: dt=1.792000, rms=0.741 (0.493%), neg=0, invalid=762 0235: dt=1.792000, rms=0.740 (0.131%), neg=0, invalid=762 0236: dt=1.792000, rms=0.740 (0.067%), neg=0, invalid=762 0237: dt=1.792000, rms=0.740 (0.037%), neg=0, invalid=762 0238: dt=1.792000, rms=0.739 (0.021%), neg=0, invalid=762 0239: dt=1.792000, rms=0.739 (0.030%), neg=0, invalid=762 0240: dt=1.792000, rms=0.739 (0.019%), neg=0, invalid=762 0241: dt=1.792000, rms=0.739 (-0.017%), neg=0, invalid=762 0242: dt=0.448000, rms=0.739 (0.000%), neg=0, invalid=762 0243: dt=1.792000, rms=0.739 (0.003%), neg=0, invalid=762 0244: dt=1.792000, rms=0.739 (0.004%), neg=0, invalid=762 0245: dt=1.792000, rms=0.739 (0.012%), neg=0, invalid=762 0246: dt=1.792000, rms=0.739 (0.003%), neg=0, invalid=762 resetting metric properties... setting smoothness coefficient to 2.000 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.706, neg=0, invalid=762 0247: dt=0.384000, rms=0.689 (2.469%), neg=0, invalid=762 0248: dt=0.448000, rms=0.679 (1.361%), neg=0, invalid=762 0249: dt=0.384000, rms=0.675 (0.627%), neg=0, invalid=762 0250: dt=0.320000, rms=0.672 (0.379%), neg=0, invalid=762 0251: dt=0.320000, rms=0.670 (0.310%), neg=0, invalid=762 0252: dt=0.320000, rms=0.669 (0.247%), neg=0, invalid=762 0253: dt=0.320000, rms=0.667 (0.214%), neg=0, invalid=762 0254: dt=0.112000, rms=0.667 (0.061%), neg=0, invalid=762 0255: dt=0.384000, rms=0.665 (0.213%), neg=0, invalid=762 0256: dt=0.112000, rms=0.665 (0.060%), neg=0, invalid=762 0257: dt=0.320000, rms=0.664 (0.136%), neg=0, invalid=762 0258: dt=0.320000, rms=0.663 (0.123%), neg=0, invalid=762 0259: dt=0.326087, rms=0.663 (0.110%), neg=0, invalid=762 0260: dt=0.320000, rms=0.662 (0.098%), neg=0, invalid=762 0261: dt=0.112000, rms=0.662 (0.039%), neg=0, invalid=762 0262: dt=0.112000, rms=0.662 (0.029%), neg=0, invalid=762 0263: dt=0.112000, rms=0.661 (0.064%), neg=0, invalid=762 0264: dt=0.112000, rms=0.661 (0.082%), neg=0, invalid=762 0265: dt=0.112000, rms=0.660 (0.093%), neg=0, invalid=762 0266: dt=0.112000, rms=0.659 (0.109%), neg=0, invalid=762 0267: dt=0.112000, rms=0.658 (0.115%), neg=0, invalid=762 0268: dt=0.112000, rms=0.658 (0.121%), neg=0, invalid=762 0269: dt=0.112000, rms=0.657 (0.110%), neg=0, invalid=762 0270: dt=0.112000, rms=0.656 (0.103%), neg=0, invalid=762 0271: dt=0.112000, rms=0.656 (0.096%), neg=0, invalid=762 0272: dt=0.112000, rms=0.655 (0.092%), neg=0, invalid=762 0273: dt=0.112000, rms=0.655 (0.075%), neg=0, invalid=762 0274: dt=0.112000, rms=0.654 (0.069%), neg=0, invalid=762 0275: dt=0.112000, rms=0.654 (0.059%), neg=0, invalid=762 0276: dt=0.112000, rms=0.653 (0.048%), neg=0, invalid=762 0277: dt=0.112000, rms=0.653 (0.040%), neg=0, invalid=762 0278: dt=0.112000, rms=0.653 (0.037%), neg=0, invalid=762 0279: dt=0.112000, rms=0.653 (-0.002%), neg=0, invalid=762 0280: dt=0.028000, rms=0.653 (0.000%), neg=0, invalid=762 0281: dt=0.028000, rms=0.653 (-0.001%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.655, neg=0, invalid=762 0282: dt=0.112000, rms=0.651 (0.531%), neg=0, invalid=762 0283: dt=0.153409, rms=0.650 (0.243%), neg=0, invalid=762 0284: dt=0.112000, rms=0.649 (0.125%), neg=0, invalid=762 0285: dt=0.112000, rms=0.648 (0.098%), neg=0, invalid=762 0286: dt=0.112000, rms=0.648 (0.072%), neg=0, invalid=762 0287: dt=0.112000, rms=0.648 (0.058%), neg=0, invalid=762 0288: dt=0.112000, rms=0.647 (0.044%), neg=0, invalid=762 0289: dt=0.112000, rms=0.647 (0.034%), neg=0, invalid=762 0290: dt=0.112000, rms=0.647 (0.053%), neg=0, invalid=762 0291: dt=0.112000, rms=0.646 (0.048%), neg=0, invalid=762 0292: dt=0.112000, rms=0.646 (0.035%), neg=0, invalid=762 0293: dt=0.112000, rms=0.646 (0.010%), neg=0, invalid=762 0294: dt=0.112000, rms=0.646 (-0.029%), neg=0, invalid=762 0295: dt=0.000000, rms=0.646 (0.000%), neg=0, invalid=762 label assignment complete, 0 changed (0.00%) ********************* ALLOWING NEGATIVE NODES IN DEFORMATION******************************** **************** pass 1 of 1 ************************ enabling zero nodes setting smoothness coefficient to 0.008 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.642, neg=0, invalid=762 0296: dt=8.092000, rms=0.639 (0.325%), neg=0, invalid=762 0297: dt=6.936000, rms=0.639 (-0.002%), neg=0, invalid=762 0298: dt=6.936000, rms=0.639 (0.002%), neg=0, invalid=762 0299: dt=6.936000, rms=0.639 (-0.003%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.641, neg=0, invalid=762 0300: dt=55.488000, rms=0.639 (0.361%), neg=0, invalid=762 0301: dt=55.488000, rms=0.639 (0.015%), neg=0, invalid=762 0302: dt=55.488000, rms=0.639 (0.002%), neg=0, invalid=762 0303: dt=55.488000, rms=0.639 (-0.036%), neg=0, invalid=762 setting smoothness coefficient to 0.031 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.641, neg=0, invalid=762 iter 0, gcam->neg = 5 after 4 iterations, nbhd size=0, neg = 0 0304: dt=24.000000, rms=0.638 (0.473%), neg=0, invalid=762 iter 0, gcam->neg = 7 after 13 iterations, nbhd size=1, neg = 0 0305: dt=15.552000, rms=0.638 (0.032%), neg=0, invalid=762 iter 0, gcam->neg = 28 after 16 iterations, nbhd size=1, neg = 0 0306: dt=15.552000, rms=0.638 (-0.000%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.640, neg=0, invalid=762 iter 0, gcam->neg = 7 after 1 iterations, nbhd size=0, neg = 0 0307: dt=85.080868, rms=0.634 (0.884%), neg=0, invalid=762 iter 0, gcam->neg = 2 after 1 iterations, nbhd size=0, neg = 0 0308: dt=36.288000, rms=0.633 (0.268%), neg=0, invalid=762 iter 0, gcam->neg = 81 after 15 iterations, nbhd size=1, neg = 0 0309: dt=145.152000, rms=0.631 (0.327%), neg=0, invalid=762 iter 0, gcam->neg = 18 after 4 iterations, nbhd size=0, neg = 0 0310: dt=36.288000, rms=0.630 (0.136%), neg=0, invalid=762 iter 0, gcam->neg = 16 after 16 iterations, nbhd size=1, neg = 0 0311: dt=36.288000, rms=0.630 (0.039%), neg=0, invalid=762 iter 0, gcam->neg = 27 after 13 iterations, nbhd size=1, neg = 0 0312: dt=36.288000, rms=0.629 (0.078%), neg=0, invalid=762 iter 0, gcam->neg = 61 after 15 iterations, nbhd size=1, neg = 0 0313: dt=36.288000, rms=0.628 (0.103%), neg=0, invalid=762 iter 0, gcam->neg = 82 after 18 iterations, nbhd size=1, neg = 0 0314: dt=36.288000, rms=0.628 (0.133%), neg=0, invalid=762 iter 0, gcam->neg = 109 after 14 iterations, nbhd size=1, neg = 0 0315: dt=36.288000, rms=0.627 (0.124%), neg=0, invalid=762 iter 0, gcam->neg = 117 after 17 iterations, nbhd size=1, neg = 0 0316: dt=36.288000, rms=0.626 (0.101%), neg=0, invalid=762 iter 0, gcam->neg = 38 after 15 iterations, nbhd size=1, neg = 0 0317: dt=145.152000, rms=0.626 (0.074%), neg=0, invalid=762 iter 0, gcam->neg = 31 after 16 iterations, nbhd size=1, neg = 0 0318: dt=145.152000, rms=0.625 (0.044%), neg=0, invalid=762 iter 0, gcam->neg = 129 after 14 iterations, nbhd size=1, neg = 0 0319: dt=145.152000, rms=0.624 (0.157%), neg=0, invalid=762 iter 0, gcam->neg = 197 after 20 iterations, nbhd size=1, neg = 0 0320: dt=145.152000, rms=0.624 (0.044%), neg=0, invalid=762 iter 0, gcam->neg = 297 after 18 iterations, nbhd size=1, neg = 0 0321: dt=145.152000, rms=0.624 (0.039%), neg=0, invalid=762 iter 0, gcam->neg = 13 after 10 iterations, nbhd size=1, neg = 0 0322: dt=36.288000, rms=0.622 (0.280%), neg=0, invalid=762 iter 0, gcam->neg = 29 after 13 iterations, nbhd size=1, neg = 0 0323: dt=145.152000, rms=0.622 (0.045%), neg=0, invalid=762 iter 0, gcam->neg = 65 after 7 iterations, nbhd size=0, neg = 0 0324: dt=145.152000, rms=0.622 (-0.027%), neg=0, invalid=762 setting smoothness coefficient to 0.118 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.627, neg=0, invalid=762 iter 0, gcam->neg = 562 after 19 iterations, nbhd size=1, neg = 0 0325: dt=42.292398, rms=0.619 (1.379%), neg=0, invalid=762 iter 0, gcam->neg = 762 after 25 iterations, nbhd size=1, neg = 0 0326: dt=38.400000, rms=0.612 (1.093%), neg=0, invalid=762 iter 0, gcam->neg = 476 after 27 iterations, nbhd size=1, neg = 0 0327: dt=23.272727, rms=0.609 (0.514%), neg=0, invalid=762 iter 0, gcam->neg = 576 after 21 iterations, nbhd size=1, neg = 0 0328: dt=44.800000, rms=0.605 (0.550%), neg=0, invalid=762 iter 0, gcam->neg = 488 after 22 iterations, nbhd size=1, neg = 0 0329: dt=32.000000, rms=0.603 (0.368%), neg=0, invalid=762 iter 0, gcam->neg = 349 after 23 iterations, nbhd size=1, neg = 0 0330: dt=32.000000, rms=0.601 (0.294%), neg=0, invalid=762 iter 0, gcam->neg = 284 after 20 iterations, nbhd size=1, neg = 0 0331: dt=32.000000, rms=0.600 (0.255%), neg=0, invalid=762 iter 0, gcam->neg = 287 after 25 iterations, nbhd size=1, neg = 0 0332: dt=25.600000, rms=0.599 (0.172%), neg=0, invalid=762 iter 0, gcam->neg = 135 after 19 iterations, nbhd size=1, neg = 0 0333: dt=25.600000, rms=0.598 (0.188%), neg=0, invalid=762 iter 0, gcam->neg = 398 after 30 iterations, nbhd size=1, neg = 0 0334: dt=25.600000, rms=0.596 (0.196%), neg=0, invalid=762 iter 0, gcam->neg = 721 after 30 iterations, nbhd size=1, neg = 0 0335: dt=25.600000, rms=0.595 (0.254%), neg=0, invalid=762 iter 0, gcam->neg = 943 after 29 iterations, nbhd size=1, neg = 0 0336: dt=25.600000, rms=0.594 (0.216%), neg=0, invalid=762 iter 0, gcam->neg = 1302 after 33 iterations, nbhd size=1, neg = 0 0337: dt=25.600000, rms=0.592 (0.268%), neg=0, invalid=762 iter 0, gcam->neg = 1737 after 37 iterations, nbhd size=1, neg = 0 0338: dt=25.600000, rms=0.591 (0.104%), neg=0, invalid=762 iter 0, gcam->neg = 1983 after 34 iterations, nbhd size=1, neg = 0 0339: dt=25.600000, rms=0.591 (0.123%), neg=0, invalid=762 iter 0, gcam->neg = 1893 after 37 iterations, nbhd size=1, neg = 0 0340: dt=25.600000, rms=0.590 (0.142%), neg=0, invalid=762 iter 0, gcam->neg = 2244 after 36 iterations, nbhd size=1, neg = 0 0341: dt=25.600000, rms=0.589 (0.180%), neg=0, invalid=762 iter 0, gcam->neg = 1983 after 41 iterations, nbhd size=1, neg = 0 0342: dt=25.600000, rms=0.589 (-0.118%), neg=0, invalid=762 iter 0, gcam->neg = 182 after 30 iterations, nbhd size=1, neg = 0 0343: dt=25.600000, rms=0.588 (0.157%), neg=0, invalid=762 iter 0, gcam->neg = 335 after 31 iterations, nbhd size=1, neg = 0 0344: dt=44.800000, rms=0.587 (0.275%), neg=0, invalid=762 iter 0, gcam->neg = 16 after 10 iterations, nbhd size=1, neg = 0 0345: dt=6.400000, rms=0.587 (-0.041%), neg=0, invalid=762 iter 0, gcam->neg = 16 after 10 iterations, nbhd size=1, neg = 0 0346: dt=6.400000, rms=0.587 (0.010%), neg=0, invalid=762 iter 0, gcam->neg = 51 after 24 iterations, nbhd size=2, neg = 0 0347: dt=6.400000, rms=0.587 (0.010%), neg=0, invalid=762 iter 0, gcam->neg = 62 after 19 iterations, nbhd size=1, neg = 0 0348: dt=6.400000, rms=0.587 (-0.038%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.589, neg=0, invalid=762 iter 0, gcam->neg = 36 after 15 iterations, nbhd size=1, neg = 0 0349: dt=32.000000, rms=0.585 (0.632%), neg=0, invalid=762 iter 0, gcam->neg = 288 after 26 iterations, nbhd size=1, neg = 0 0350: dt=44.800000, rms=0.583 (0.406%), neg=0, invalid=762 iter 0, gcam->neg = 30 after 25 iterations, nbhd size=1, neg = 0 0351: dt=25.600000, rms=0.582 (0.049%), neg=0, invalid=762 iter 0, gcam->neg = 40 after 17 iterations, nbhd size=1, neg = 0 0352: dt=25.600000, rms=0.582 (0.109%), neg=0, invalid=762 iter 0, gcam->neg = 103 after 16 iterations, nbhd size=1, neg = 0 0353: dt=25.600000, rms=0.581 (0.128%), neg=0, invalid=762 iter 0, gcam->neg = 90 after 18 iterations, nbhd size=1, neg = 0 0354: dt=25.600000, rms=0.580 (0.153%), neg=0, invalid=762 iter 0, gcam->neg = 154 after 19 iterations, nbhd size=1, neg = 0 0355: dt=25.600000, rms=0.579 (0.125%), neg=0, invalid=762 iter 0, gcam->neg = 309 after 26 iterations, nbhd size=1, neg = 0 0356: dt=25.600000, rms=0.579 (0.109%), neg=0, invalid=762 iter 0, gcam->neg = 511 after 28 iterations, nbhd size=1, neg = 0 0357: dt=25.600000, rms=0.579 (0.042%), neg=0, invalid=762 iter 0, gcam->neg = 138 after 25 iterations, nbhd size=1, neg = 0 0358: dt=38.400000, rms=0.578 (0.102%), neg=0, invalid=762 iter 0, gcam->neg = 251 after 25 iterations, nbhd size=1, neg = 0 0359: dt=44.800000, rms=0.577 (0.151%), neg=0, invalid=762 iter 0, gcam->neg = 45 after 19 iterations, nbhd size=1, neg = 0 0360: dt=25.600000, rms=0.577 (0.040%), neg=0, invalid=762 iter 0, gcam->neg = 36 after 26 iterations, nbhd size=2, neg = 0 0361: dt=25.600000, rms=0.577 (-0.019%), neg=0, invalid=762 setting smoothness coefficient to 0.400 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.607, neg=0, invalid=762 iter 0, gcam->neg = 18 after 11 iterations, nbhd size=1, neg = 0 0362: dt=3.456000, rms=0.605 (0.431%), neg=0, invalid=762 iter 0, gcam->neg = 18 after 15 iterations, nbhd size=1, neg = 0 0363: dt=2.880000, rms=0.605 (0.036%), neg=0, invalid=762 iter 0, gcam->neg = 14 after 12 iterations, nbhd size=1, neg = 0 0364: dt=2.880000, rms=0.604 (0.016%), neg=0, invalid=762 iter 0, gcam->neg = 29 after 19 iterations, nbhd size=1, neg = 0 0365: dt=2.880000, rms=0.605 (-0.092%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.607, neg=0, invalid=762 iter 0, gcam->neg = 35 after 6 iterations, nbhd size=0, neg = 0 0366: dt=5.333333, rms=0.604 (0.426%), neg=0, invalid=762 iter 0, gcam->neg = 41 after 14 iterations, nbhd size=1, neg = 0 0367: dt=5.250000, rms=0.604 (0.060%), neg=0, invalid=762 iter 0, gcam->neg = 86 after 16 iterations, nbhd size=1, neg = 0 0368: dt=5.250000, rms=0.603 (0.033%), neg=0, invalid=762 iter 0, gcam->neg = 146 after 21 iterations, nbhd size=1, neg = 0 0369: dt=5.250000, rms=0.603 (0.064%), neg=0, invalid=762 iter 0, gcam->neg = 210 after 20 iterations, nbhd size=1, neg = 0 0370: dt=5.250000, rms=0.603 (-0.019%), neg=0, invalid=762 setting smoothness coefficient to 1.000 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.638, neg=0, invalid=762 0371: dt=0.000040, rms=0.636 (0.318%), neg=0, invalid=762 0372: dt=0.000000, rms=0.636 (0.000%), neg=0, invalid=762 0373: dt=0.100000, rms=0.636 (-0.011%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.638, neg=0, invalid=762 0374: dt=0.448000, rms=0.636 (0.331%), neg=0, invalid=762 iter 0, gcam->neg = 1 after 1 iterations, nbhd size=0, neg = 0 0375: dt=0.448000, rms=0.636 (0.010%), neg=0, invalid=762 iter 0, gcam->neg = 1 after 0 iterations, nbhd size=0, neg = 0 0376: dt=0.448000, rms=0.635 (0.012%), neg=0, invalid=762 0377: dt=0.448000, rms=0.635 (-0.005%), neg=0, invalid=762 resetting metric properties... setting smoothness coefficient to 2.000 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.588, neg=0, invalid=762 iter 0, gcam->neg = 3344 after 18 iterations, nbhd size=1, neg = 0 0378: dt=1.350057, rms=0.558 (5.091%), neg=0, invalid=762 0379: dt=0.000013, rms=0.558 (-0.002%), neg=0, invalid=762 0380: dt=0.000013, rms=0.558 (0.000%), neg=0, invalid=762 0381: dt=0.000013, rms=0.558 (-0.000%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.560, neg=0, invalid=762 0382: dt=0.028000, rms=0.558 (0.406%), neg=0, invalid=762 0383: dt=0.007000, rms=0.558 (0.003%), neg=0, invalid=762 0384: dt=0.007000, rms=0.558 (-0.000%), neg=0, invalid=762 label assignment complete, 0 changed (0.00%) label assignment complete, 0 changed (0.00%) ***************** morphing with label term set to 0 ******************************* **************** pass 1 of 1 ************************ enabling zero nodes setting smoothness coefficient to 0.008 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.551, neg=0, invalid=762 0385: dt=0.000000, rms=0.551 (0.000%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.551, neg=0, invalid=762 0386: dt=32.368000, rms=0.551 (0.008%), neg=0, invalid=762 0387: dt=18.496000, rms=0.551 (0.001%), neg=0, invalid=762 0388: dt=18.496000, rms=0.551 (-0.000%), neg=0, invalid=762 setting smoothness coefficient to 0.031 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.551, neg=0, invalid=762 iter 0, gcam->neg = 15 after 5 iterations, nbhd size=0, neg = 0 0389: dt=21.142857, rms=0.551 (0.087%), neg=0, invalid=762 iter 0, gcam->neg = 15 after 21 iterations, nbhd size=2, neg = 0 0390: dt=9.072000, rms=0.551 (-0.050%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.551, neg=0, invalid=762 iter 0, gcam->neg = 93 after 15 iterations, nbhd size=1, neg = 0 0391: dt=74.954955, rms=0.549 (0.210%), neg=0, invalid=762 iter 0, gcam->neg = 66 after 23 iterations, nbhd size=1, neg = 0 0392: dt=62.208000, rms=0.549 (0.063%), neg=0, invalid=762 iter 0, gcam->neg = 66 after 15 iterations, nbhd size=1, neg = 0 0393: dt=62.208000, rms=0.548 (0.094%), neg=0, invalid=762 iter 0, gcam->neg = 134 after 30 iterations, nbhd size=1, neg = 0 0394: dt=62.208000, rms=0.548 (0.019%), neg=0, invalid=762 iter 0, gcam->neg = 179 after 24 iterations, nbhd size=1, neg = 0 0395: dt=62.208000, rms=0.548 (-0.033%), neg=0, invalid=762 setting smoothness coefficient to 0.118 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.549, neg=0, invalid=762 iter 0, gcam->neg = 598 after 25 iterations, nbhd size=1, neg = 0 0396: dt=25.600000, rms=0.546 (0.603%), neg=0, invalid=762 iter 0, gcam->neg = 845 after 25 iterations, nbhd size=1, neg = 0 0397: dt=38.400000, rms=0.543 (0.403%), neg=0, invalid=762 iter 0, gcam->neg = 469 after 27 iterations, nbhd size=1, neg = 0 0398: dt=24.832808, rms=0.543 (0.042%), neg=0, invalid=762 iter 0, gcam->neg = 330 after 31 iterations, nbhd size=1, neg = 0 0399: dt=24.832808, rms=0.543 (0.054%), neg=0, invalid=762 iter 0, gcam->neg = 712 after 34 iterations, nbhd size=1, neg = 0 0400: dt=24.832808, rms=0.543 (0.021%), neg=0, invalid=762 iter 0, gcam->neg = 1309 after 43 iterations, nbhd size=1, neg = 0 0401: dt=24.832808, rms=0.543 (-0.321%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.543, neg=0, invalid=762 iter 0, gcam->neg = 205 after 26 iterations, nbhd size=1, neg = 0 0402: dt=44.800000, rms=0.538 (0.840%), neg=0, invalid=762 iter 0, gcam->neg = 301 after 26 iterations, nbhd size=1, neg = 0 0403: dt=36.879433, rms=0.537 (0.292%), neg=0, invalid=762 iter 0, gcam->neg = 201 after 27 iterations, nbhd size=1, neg = 0 0404: dt=38.400000, rms=0.535 (0.247%), neg=0, invalid=762 iter 0, gcam->neg = 307 after 28 iterations, nbhd size=1, neg = 0 0405: dt=38.400000, rms=0.535 (0.115%), neg=0, invalid=762 iter 0, gcam->neg = 434 after 32 iterations, nbhd size=1, neg = 0 0406: dt=38.400000, rms=0.534 (0.190%), neg=0, invalid=762 iter 0, gcam->neg = 638 after 39 iterations, nbhd size=1, neg = 0 0407: dt=38.400000, rms=0.534 (-0.123%), neg=0, invalid=762 iter 0, gcam->neg = 153 after 27 iterations, nbhd size=1, neg = 0 0408: dt=32.000000, rms=0.534 (0.019%), neg=0, invalid=762 iter 0, gcam->neg = 190 after 25 iterations, nbhd size=1, neg = 0 0409: dt=25.600000, rms=0.533 (0.103%), neg=0, invalid=762 iter 0, gcam->neg = 138 after 25 iterations, nbhd size=1, neg = 0 0410: dt=32.000000, rms=0.533 (-0.073%), neg=0, invalid=762 setting smoothness coefficient to 0.400 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.541, neg=0, invalid=762 iter 0, gcam->neg = 397 after 30 iterations, nbhd size=1, neg = 0 0411: dt=9.027027, rms=0.539 (0.261%), neg=0, invalid=762 iter 0, gcam->neg = 457 after 28 iterations, nbhd size=1, neg = 0 0412: dt=8.559350, rms=0.538 (0.236%), neg=0, invalid=762 iter 0, gcam->neg = 468 after 30 iterations, nbhd size=1, neg = 0 0413: dt=8.559350, rms=0.537 (0.222%), neg=0, invalid=762 iter 0, gcam->neg = 1118 after 28 iterations, nbhd size=1, neg = 0 0414: dt=8.559350, rms=0.537 (-0.029%), neg=0, invalid=762 iter 0, gcam->neg = 665 after 34 iterations, nbhd size=2, neg = 0 0415: dt=9.500000, rms=0.537 (0.005%), neg=0, invalid=762 iter 0, gcam->neg = 509 after 33 iterations, nbhd size=1, neg = 0 0416: dt=8.380952, rms=0.537 (-0.031%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.537, neg=0, invalid=762 iter 0, gcam->neg = 509 after 35 iterations, nbhd size=1, neg = 0 0417: dt=10.192741, rms=0.534 (0.582%), neg=0, invalid=762 iter 0, gcam->neg = 373 after 29 iterations, nbhd size=1, neg = 0 0418: dt=8.311688, rms=0.533 (0.179%), neg=0, invalid=762 iter 0, gcam->neg = 279 after 32 iterations, nbhd size=1, neg = 0 0419: dt=8.311688, rms=0.531 (0.255%), neg=0, invalid=762 iter 0, gcam->neg = 719 after 32 iterations, nbhd size=1, neg = 0 0420: dt=8.311688, rms=0.531 (0.131%), neg=0, invalid=762 iter 0, gcam->neg = 1118 after 35 iterations, nbhd size=1, neg = 0 0421: dt=8.311688, rms=0.531 (-0.069%), neg=0, invalid=762 iter 0, gcam->neg = 278 after 25 iterations, nbhd size=1, neg = 0 0422: dt=7.852156, rms=0.530 (0.084%), neg=0, invalid=762 iter 0, gcam->neg = 260 after 28 iterations, nbhd size=1, neg = 0 0423: dt=8.064343, rms=0.530 (0.094%), neg=0, invalid=762 iter 0, gcam->neg = 254 after 21 iterations, nbhd size=1, neg = 0 0424: dt=8.625337, rms=0.529 (0.143%), neg=0, invalid=762 iter 0, gcam->neg = 53 after 35 iterations, nbhd size=3, neg = 0 0425: dt=4.032000, rms=0.529 (-0.467%), neg=0, invalid=762 setting smoothness coefficient to 1.000 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.540, neg=0, invalid=762 0426: dt=0.000040, rms=0.540 (0.000%), neg=0, invalid=762 0427: dt=0.000000, rms=0.540 (0.000%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.540, neg=0, invalid=762 0428: dt=0.000000, rms=0.540 (0.000%), neg=0, invalid=762 resetting metric properties... setting smoothness coefficient to 2.000 blurring input image with Gaussian with sigma=2.000... 0000: dt=0.000, rms=0.522, neg=0, invalid=762 iter 0, gcam->neg = 1284 after 33 iterations, nbhd size=1, neg = 0 0429: dt=0.559172, rms=0.517 (0.927%), neg=0, invalid=762 iter 0, gcam->neg = 87 after 11 iterations, nbhd size=1, neg = 0 0430: dt=0.320000, rms=0.515 (0.282%), neg=0, invalid=762 iter 0, gcam->neg = 49 after 9 iterations, nbhd size=1, neg = 0 0431: dt=0.320000, rms=0.514 (0.246%), neg=0, invalid=762 iter 0, gcam->neg = 39 after 10 iterations, nbhd size=1, neg = 0 0432: dt=0.320000, rms=0.513 (0.139%), neg=0, invalid=762 iter 0, gcam->neg = 109 after 18 iterations, nbhd size=1, neg = 0 0433: dt=0.320000, rms=0.512 (0.163%), neg=0, invalid=762 iter 0, gcam->neg = 166 after 18 iterations, nbhd size=1, neg = 0 0434: dt=0.320000, rms=0.512 (0.167%), neg=0, invalid=762 iter 0, gcam->neg = 258 after 21 iterations, nbhd size=1, neg = 0 0435: dt=0.320000, rms=0.511 (0.073%), neg=0, invalid=762 iter 0, gcam->neg = 359 after 21 iterations, nbhd size=1, neg = 0 0436: dt=0.320000, rms=0.511 (-0.106%), neg=0, invalid=762 0437: dt=0.112000, rms=0.511 (0.071%), neg=0, invalid=762 iter 0, gcam->neg = 19 after 20 iterations, nbhd size=1, neg = 0 0438: dt=0.256000, rms=0.511 (0.007%), neg=0, invalid=762 blurring input image with Gaussian with sigma=0.500... 0000: dt=0.000, rms=0.511, neg=0, invalid=762 iter 0, gcam->neg = 471 after 17 iterations, nbhd size=1, neg = 0 0439: dt=0.453901, rms=0.508 (0.609%), neg=0, invalid=762 iter 0, gcam->neg = 10 after 7 iterations, nbhd size=1, neg = 0 0440: dt=0.256000, rms=0.507 (0.179%), neg=0, invalid=762 iter 0, gcam->neg = 11 after 1 iterations, nbhd size=0, neg = 0 0441: dt=0.256000, rms=0.506 (0.120%), neg=0, invalid=762 iter 0, gcam->neg = 38 after 10 iterations, nbhd size=1, neg = 0 0442: dt=0.256000, rms=0.506 (0.132%), neg=0, invalid=762 iter 0, gcam->neg = 76 after 18 iterations, nbhd size=1, neg = 0 0443: dt=0.256000, rms=0.505 (0.027%), neg=0, invalid=762 iter 0, gcam->neg = 114 after 29 iterations, nbhd size=2, neg = 0 0444: dt=0.256000, rms=0.505 (-0.374%), neg=0, invalid=762 0445: dt=0.112000, rms=0.505 (0.040%), neg=0, invalid=762 0446: dt=0.192000, rms=0.505 (0.034%), neg=0, invalid=762 writing output transformation to transforms/talairach.m3z... GCAMwrite mri_ca_register took 3 hours, 8 minutes and 34 seconds. mri_ca_register utimesec 13747.037888 mri_ca_register stimesec 95.848901 mri_ca_register ru_maxrss 1332672 mri_ca_register ru_ixrss 0 mri_ca_register ru_idrss 0 mri_ca_register ru_isrss 0 mri_ca_register ru_minflt 87607513 mri_ca_register ru_majflt 6 mri_ca_register ru_nswap 0 mri_ca_register ru_inblock 624 mri_ca_register ru_oublock 65704 mri_ca_register ru_msgsnd 0 mri_ca_register ru_msgrcv 0 mri_ca_register ru_nsignals 0 mri_ca_register ru_nvcsw 54759 mri_ca_register ru_nivcsw 36324 FSRUNTIME@ mri_ca_register 3.1428 hours 4 threads #-------------------------------------- #@# SubCort Seg Wed Feb 10 10:06:13 UTC 2021 mri_ca_label -relabel_unlikely 9 .3 -prior 0.5 -align norm.mgz transforms/talairach.m3z /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca aseg.auto_noCCseg.mgz sysname Linux hostname 85b04e758063 machine x86_64 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/mri mri_ca_label -relabel_unlikely 9 .3 -prior 0.5 -align norm.mgz transforms/talairach.m3z /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca aseg.auto_noCCseg.mgz == Number of threads available to mri_ca_label for OpenMP = 4 == relabeling unlikely voxels with window_size = 9 and prior threshold 0.30 using Gibbs prior factor = 0.500 renormalizing sequences with structure alignment, equivalent to: -renormalize -renormalize_mean 0.500 -regularize 0.500 reading 1 input volumes reading classifier array from /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca reading input volume from norm.mgz average std[0] = 7.3 reading transform from transforms/talairach.m3z setting orig areas to linear transform determinant scaled 6.98 Atlas used for the 3D morph was /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca average std = 7.3 using min determinant for regularization = 5.3 0 singular and 0 ill-conditioned covariance matrices regularized labeling volume... renormalizing by structure alignment.... renormalizing input #0 gca peak = 0.16259 (20) mri peak = 0.11680 (23) Left_Lateral_Ventricle (4): linear fit = 1.20 x + 0.0 (3445 voxels, overlap=0.718) Left_Lateral_Ventricle (4): linear fit = 1.20 x + 0.0 (3445 voxels, peak = 24), gca=23.9 gca peak = 0.17677 (13) mri peak = 0.09911 (24) Right_Lateral_Ventricle (43): linear fit = 1.60 x + 0.0 (3184 voxels, overlap=0.381) Right_Lateral_Ventricle (43): linear fit = 1.50 x + 0.0 (3184 voxels, peak = 21), gca=19.5 gca peak = 0.28129 (95) mri peak = 0.12245 (81) Right_Pallidum (52): linear fit = 0.95 x + 0.0 (99 voxels, overlap=0.469) Right_Pallidum (52): linear fit = 0.95 x + 0.0 (99 voxels, peak = 91), gca=90.7 gca peak = 0.16930 (96) mri peak = 0.12683 (78) Left_Pallidum (13): linear fit = 0.83 x + 0.0 (225 voxels, overlap=0.027) Left_Pallidum (13): linear fit = 0.83 x + 0.0 (225 voxels, peak = 80), gca=80.2 gca peak = 0.24553 (55) mri peak = 0.07392 (51) Right_Hippocampus (53): linear fit = 1.02 x + 0.0 (3505 voxels, overlap=1.009) Right_Hippocampus (53): linear fit = 1.02 x + 0.0 (3505 voxels, peak = 56), gca=56.4 gca peak = 0.30264 (59) mri peak = 0.07248 (56) Left_Hippocampus (17): linear fit = 1.04 x + 0.0 (1362 voxels, overlap=1.019) Left_Hippocampus (17): linear fit = 1.04 x + 0.0 (1362 voxels, peak = 62), gca=61.7 gca peak = 0.07580 (103) mri peak = 0.09752 (109) Right_Cerebral_White_Matter (41): linear fit = 1.07 x + 0.0 (32351 voxels, overlap=0.548) Right_Cerebral_White_Matter (41): linear fit = 1.07 x + 0.0 (32351 voxels, peak = 110), gca=109.7 gca peak = 0.07714 (104) mri peak = 0.07581 (108) Left_Cerebral_White_Matter (2): linear fit = 1.08 x + 0.0 (31567 voxels, overlap=0.413) Left_Cerebral_White_Matter (2): linear fit = 1.08 x + 0.0 (31567 voxels, peak = 112), gca=111.8 gca peak = 0.09712 (58) mri peak = 0.03793 (86) Left_Cerebral_Cortex (3): linear fit = 1.47 x + 0.0 (33509 voxels, overlap=0.000) Left_Cerebral_Cortex (3): linear fit = 1.47 x + 0.0 (33509 voxels, peak = 85), gca=85.0 gca peak = 0.11620 (58) mri peak = 0.04319 (85) Right_Cerebral_Cortex (42): linear fit = 1.47 x + 0.0 (29996 voxels, overlap=0.000) Right_Cerebral_Cortex (42): linear fit = 1.47 x + 0.0 (29996 voxels, peak = 85), gca=85.0 gca peak = 0.30970 (66) mri peak = 0.09736 (89) Right_Caudate (50): linear fit = 1.33 x + 0.0 (725 voxels, overlap=0.024) Right_Caudate (50): linear fit = 1.33 x + 0.0 (725 voxels, peak = 87), gca=87.5 gca peak = 0.15280 (69) mri peak = 0.14132 (98) Left_Caudate (11): linear fit = 1.25 x + 0.0 (774 voxels, overlap=0.019) Left_Caudate (11): linear fit = 1.25 x + 0.0 (774 voxels, peak = 87), gca=86.6 gca peak = 0.13902 (56) mri peak = 0.03359 (55) Left_Cerebellum_Cortex (8): linear fit = 1.04 x + 0.0 (17627 voxels, overlap=0.728) Left_Cerebellum_Cortex (8): linear fit = 1.04 x + 0.0 (17627 voxels, peak = 59), gca=58.5 gca peak = 0.14777 (55) mri peak = 0.04053 (53) Right_Cerebellum_Cortex (47): linear fit = 1.04 x + 0.0 (26024 voxels, overlap=0.987) Right_Cerebellum_Cortex (47): linear fit = 1.04 x + 0.0 (26024 voxels, peak = 57), gca=57.5 gca peak = 0.16765 (84) mri peak = 0.06032 (78) Left_Cerebellum_White_Matter (7): linear fit = 0.92 x + 0.0 (4306 voxels, overlap=0.471) Left_Cerebellum_White_Matter (7): linear fit = 0.92 x + 0.0 (4306 voxels, peak = 77), gca=76.9 gca peak = 0.18739 (84) mri peak = 0.04709 (73) Right_Cerebellum_White_Matter (46): linear fit = 0.98 x + 0.0 (6978 voxels, overlap=0.860) Right_Cerebellum_White_Matter (46): linear fit = 0.98 x + 0.0 (6978 voxels, peak = 82), gca=81.9 gca peak = 0.29869 (57) mri peak = 0.10760 (57) Left_Amygdala (18): linear fit = 0.98 x + 0.0 (512 voxels, overlap=1.032) Left_Amygdala (18): linear fit = 0.98 x + 0.0 (512 voxels, peak = 56), gca=55.6 gca peak = 0.33601 (57) mri peak = 0.17637 (52) Right_Amygdala (54): linear fit = 0.89 x + 0.0 (656 voxels, overlap=1.011) Right_Amygdala (54): linear fit = 0.89 x + 0.0 (656 voxels, peak = 51), gca=51.0 gca peak = 0.11131 (90) mri peak = 0.08600 (75) Left_Thalamus_Proper (10): linear fit = 0.95 x + 0.0 (4269 voxels, overlap=0.972) Left_Thalamus_Proper (10): linear fit = 0.95 x + 0.0 (4269 voxels, peak = 86), gca=85.9 gca peak = 0.11793 (83) mri peak = 0.09946 (81) Right_Thalamus_Proper (49): linear fit = 0.99 x + 0.0 (2049 voxels, overlap=0.979) Right_Thalamus_Proper (49): linear fit = 0.99 x + 0.0 (2049 voxels, peak = 82), gca=81.8 gca peak = 0.08324 (81) mri peak = 0.05250 (66) Left_Putamen (12): linear fit = 0.98 x + 0.0 (878 voxels, overlap=0.894) Left_Putamen (12): linear fit = 0.98 x + 0.0 (878 voxels, peak = 79), gca=79.0 gca peak = 0.10360 (77) mri peak = 0.07526 (81) Right_Putamen (51): linear fit = 1.09 x + 0.0 (443 voxels, overlap=0.753) Right_Putamen (51): linear fit = 1.09 x + 0.0 (443 voxels, peak = 84), gca=83.5 gca peak = 0.08424 (78) mri peak = 0.19429 (80) Brain_Stem: unreasonable value (79.2/80.0), not in range [80, 110] - rejecting gca peak = 0.12631 (89) mri peak = 0.39344 (81) Right_VentralDC (60): linear fit = 0.94 x + 0.0 (1728 voxels, overlap=0.267) Right_VentralDC (60): linear fit = 0.94 x + 0.0 (1728 voxels, peak = 83), gca=83.2 gca peak = 0.14500 (87) mri peak = 0.30075 (81) Left_VentralDC (28): linear fit = 0.93 x + 0.0 (1197 voxels, overlap=0.673) Left_VentralDC (28): linear fit = 0.93 x + 0.0 (1197 voxels, peak = 80), gca=80.5 gca peak = 0.14975 (24) mri peak = 0.10743 (14) Third_Ventricle (14): linear fit = 1.82 x + 0.0 (89 voxels, overlap=0.039) Third_Ventricle (14): linear fit = 1.82 x + 0.0 (89 voxels, peak = 44), gca=43.6 gca peak = 0.19357 (14) mri peak = 0.12732 ( 8) Fourth_Ventricle (15): linear fit = 0.44 x + 0.0 (283 voxels, overlap=0.065) Fourth_Ventricle (15): linear fit = 0.44 x + 0.0 (283 voxels, peak = 6), gca=6.1 gca peak Unknown = 0.94835 ( 0) gca peak Left_Inf_Lat_Vent = 0.16825 (27) gca peak Left_Thalamus = 1.00000 (94) gca peak Third_Ventricle = 0.14975 (24) gca peak Fourth_Ventricle = 0.19357 (14) gca peak Brain_Stem = 0.08424 (78) gca peak CSF = 0.23379 (36) gca peak Left_Accumbens_area = 0.70037 (62) gca peak Left_undetermined = 1.00000 (26) gca peak Left_vessel = 0.75997 (52) gca peak Left_choroid_plexus = 0.12089 (35) gca peak Right_Inf_Lat_Vent = 0.24655 (23) gca peak Right_Accumbens_area = 0.45042 (65) gca peak Right_vessel = 0.82168 (52) gca peak Right_choroid_plexus = 0.14516 (37) gca peak Fifth_Ventricle = 0.65475 (32) gca peak WM_hypointensities = 0.07854 (76) gca peak non_WM_hypointensities = 0.08491 (43) gca peak Optic_Chiasm = 0.71127 (75) not using caudate to estimate GM means estimating mean gm scale to be 1.15 x + 0.0 estimating mean wm scale to be 1.07 x + 0.0 estimating mean csf scale to be 1.35 x + 0.0 saving intensity scales to aseg.auto_noCCseg.label_intensities.txt renormalizing by structure alignment.... renormalizing input #0 gca peak = 0.15914 (22) mri peak = 0.11680 (23) Left_Lateral_Ventricle (4): linear fit = 0.94 x + 0.0 (3445 voxels, overlap=0.823) Left_Lateral_Ventricle (4): linear fit = 0.94 x + 0.0 (3445 voxels, peak = 21), gca=20.6 gca peak = 0.13759 (19) mri peak = 0.09911 (24) Right_Lateral_Ventricle (43): linear fit = 1.13 x + 0.0 (3184 voxels, overlap=0.655) Right_Lateral_Ventricle (43): linear fit = 1.13 x + 0.0 (3184 voxels, peak = 22), gca=21.6 gca peak = 0.24040 (90) mri peak = 0.12245 (81) Right_Pallidum (52): linear fit = 1.00 x + 0.0 (99 voxels, overlap=1.016) Right_Pallidum (52): linear fit = 1.00 x + 0.0 (99 voxels, peak = 90), gca=90.0 gca peak = 0.17468 (81) mri peak = 0.12683 (78) Left_Pallidum (13): linear fit = 0.99 x + 0.0 (225 voxels, overlap=0.983) Left_Pallidum (13): linear fit = 0.99 x + 0.0 (225 voxels, peak = 80), gca=79.8 gca peak = 0.26434 (57) mri peak = 0.07392 (51) Right_Hippocampus (53): linear fit = 0.94 x + 0.0 (3505 voxels, overlap=0.972) Right_Hippocampus (53): linear fit = 0.94 x + 0.0 (3505 voxels, peak = 54), gca=53.9 gca peak = 0.29231 (59) mri peak = 0.07248 (56) Left_Hippocampus (17): linear fit = 0.93 x + 0.0 (1362 voxels, overlap=0.974) Left_Hippocampus (17): linear fit = 0.93 x + 0.0 (1362 voxels, peak = 55), gca=54.6 gca peak = 0.07457 (110) mri peak = 0.09752 (109) Right_Cerebral_White_Matter (41): linear fit = 1.00 x + 0.0 (32351 voxels, overlap=0.815) Right_Cerebral_White_Matter (41): linear fit = 1.00 x + 0.0 (32351 voxels, peak = 110), gca=110.0 gca peak = 0.07324 (112) mri peak = 0.07581 (108) Left_Cerebral_White_Matter (2): linear fit = 1.00 x + 0.0 (31567 voxels, overlap=0.734) Left_Cerebral_White_Matter (2): linear fit = 1.00 x + 0.0 (31567 voxels, peak = 112), gca=112.0 gca peak = 0.06718 (85) mri peak = 0.03793 (86) Left_Cerebral_Cortex (3): linear fit = 0.99 x + 0.0 (33509 voxels, overlap=0.587) Left_Cerebral_Cortex (3): linear fit = 0.99 x + 0.0 (33509 voxels, peak = 84), gca=83.7 gca peak = 0.08237 (85) mri peak = 0.04319 (85) Right_Cerebral_Cortex (42): linear fit = 1.00 x + 0.0 (29996 voxels, overlap=0.812) Right_Cerebral_Cortex (42): linear fit = 1.00 x + 0.0 (29996 voxels, peak = 85), gca=85.0 gca peak = 0.20989 (87) mri peak = 0.09736 (89) Right_Caudate (50): linear fit = 1.00 x + 0.0 (725 voxels, overlap=1.000) Right_Caudate (50): linear fit = 1.00 x + 0.0 (725 voxels, peak = 87), gca=87.0 gca peak = 0.15797 (97) mri peak = 0.14132 (98) Left_Caudate (11): linear fit = 1.00 x + 0.0 (774 voxels, overlap=0.705) Left_Caudate (11): linear fit = 1.00 x + 0.0 (774 voxels, peak = 97), gca=97.0 gca peak = 0.13179 (57) mri peak = 0.03359 (55) Left_Cerebellum_Cortex (8): linear fit = 0.94 x + 0.0 (17627 voxels, overlap=0.542) Left_Cerebellum_Cortex (8): linear fit = 0.94 x + 0.0 (17627 voxels, peak = 54), gca=53.9 gca peak = 0.14534 (57) mri peak = 0.04053 (53) Right_Cerebellum_Cortex (47): linear fit = 0.99 x + 0.0 (26024 voxels, overlap=0.962) Right_Cerebellum_Cortex (47): linear fit = 0.99 x + 0.0 (26024 voxels, peak = 56), gca=56.1 gca peak = 0.18854 (77) mri peak = 0.06032 (78) Left_Cerebellum_White_Matter (7): linear fit = 1.01 x + 0.0 (4306 voxels, overlap=0.957) Left_Cerebellum_White_Matter (7): linear fit = 1.01 x + 0.0 (4306 voxels, peak = 78), gca=78.2 gca peak = 0.18539 (82) mri peak = 0.04709 (73) Right_Cerebellum_White_Matter (46): linear fit = 1.00 x + 0.0 (6978 voxels, overlap=0.985) Right_Cerebellum_White_Matter (46): linear fit = 1.00 x + 0.0 (6978 voxels, peak = 82), gca=81.6 gca peak = 0.29787 (57) mri peak = 0.10760 (57) Left_Amygdala (18): linear fit = 1.01 x + 0.0 (512 voxels, overlap=0.973) Left_Amygdala (18): linear fit = 1.01 x + 0.0 (512 voxels, peak = 58), gca=57.9 gca peak = 0.32328 (51) mri peak = 0.17637 (52) Right_Amygdala (54): linear fit = 1.00 x + 0.0 (656 voxels, overlap=0.864) Right_Amygdala (54): linear fit = 1.00 x + 0.0 (656 voxels, peak = 51), gca=51.0 gca peak = 0.10851 (86) mri peak = 0.08600 (75) Left_Thalamus_Proper (10): linear fit = 0.99 x + 0.0 (4269 voxels, overlap=0.957) Left_Thalamus_Proper (10): linear fit = 0.99 x + 0.0 (4269 voxels, peak = 85), gca=84.7 gca peak = 0.10425 (79) mri peak = 0.09946 (81) Right_Thalamus_Proper (49): linear fit = 0.98 x + 0.0 (2049 voxels, overlap=0.944) Right_Thalamus_Proper (49): linear fit = 0.98 x + 0.0 (2049 voxels, peak = 77), gca=77.0 gca peak = 0.08611 (77) mri peak = 0.05250 (66) Left_Putamen (12): linear fit = 0.98 x + 0.0 (878 voxels, overlap=0.946) Left_Putamen (12): linear fit = 0.98 x + 0.0 (878 voxels, peak = 75), gca=75.1 gca peak = 0.08482 (85) mri peak = 0.07526 (81) Right_Putamen (51): linear fit = 0.99 x + 0.0 (443 voxels, overlap=0.992) Right_Putamen (51): linear fit = 0.99 x + 0.0 (443 voxels, peak = 84), gca=83.7 gca peak = 0.08105 (84) mri peak = 0.19429 (80) Brain_Stem: unreasonable value (78.5/80.0), not in range [80, 110] - rejecting gca peak = 0.11135 (84) mri peak = 0.39344 (81) Right_VentralDC (60): linear fit = 1.00 x + 0.0 (1728 voxels, overlap=0.568) Right_VentralDC (60): linear fit = 1.00 x + 0.0 (1728 voxels, peak = 84), gca=84.0 gca peak = 0.14942 (79) mri peak = 0.30075 (81) Left_VentralDC: unreasonable value (79.0/81.0), not in range [80, 110] - rejecting gca peak = 0.12947 (34) mri peak = 0.10743 (14) Third_Ventricle (14): linear fit = 0.35 x + 0.0 (89 voxels, overlap=0.039) Third_Ventricle (14): linear fit = 0.35 x + 0.0 (89 voxels, peak = 12), gca=12.1 gca peak = 0.15119 (20) mri peak = 0.12732 ( 8) Fourth_Ventricle (15): linear fit = 0.32 x + 0.0 (283 voxels, overlap=0.027) Fourth_Ventricle (15): linear fit = 0.32 x + 0.0 (283 voxels, peak = 6), gca=6.5 gca peak Unknown = 0.94835 ( 0) gca peak Left_Inf_Lat_Vent = 0.18393 (35) gca peak Left_Thalamus = 0.72551 (108) gca peak Third_Ventricle = 0.12947 (34) gca peak Fourth_Ventricle = 0.15119 (20) gca peak Brain_Stem = 0.08105 (84) gca peak CSF = 0.19061 (49) gca peak Left_Accumbens_area = 0.57319 (78) gca peak Left_VentralDC = 0.14942 (79) gca peak Left_undetermined = 0.98573 (27) gca peak Left_vessel = 0.75962 (52) gca peak Left_choroid_plexus = 0.11914 (35) gca peak Right_Inf_Lat_Vent = 0.18678 (24) gca peak Right_Accumbens_area = 0.34572 (86) gca peak Right_vessel = 0.83204 (52) gca peak Right_choroid_plexus = 0.14509 (37) gca peak Fifth_Ventricle = 0.75707 (42) gca peak WM_hypointensities = 0.07016 (81) gca peak non_WM_hypointensities = 0.07883 (46) gca peak Optic_Chiasm = 0.69151 (75) not using caudate to estimate GM means setting label Left_VentralDC based on Right_VentralDC = 1.00 x + 0: 84 estimating mean gm scale to be 0.98 x + 0.0 estimating mean wm scale to be 1.00 x + 0.0 estimating mean csf scale to be 1.03 x + 0.0 saving intensity scales to aseg.auto_noCCseg.label_intensities.txt saving sequentially combined intensity scales to aseg.auto_noCCseg.label_intensities.txt 98762 voxels changed in iteration 0 of unlikely voxel relabeling 463 voxels changed in iteration 1 of unlikely voxel relabeling 8 voxels changed in iteration 2 of unlikely voxel relabeling 0 voxels changed in iteration 3 of unlikely voxel relabeling 79900 gm and wm labels changed (%38 to gray, %62 to white out of all changed labels) 702 hippocampal voxels changed. 0 amygdala voxels changed. pass 1: 92726 changed. image ll: -2.235, PF=0.500 pass 2: 28200 changed. image ll: -2.233, PF=0.500 pass 3: 10381 changed. pass 4: 4576 changed. 75051 voxels changed in iteration 0 of unlikely voxel relabeling 484 voxels changed in iteration 1 of unlikely voxel relabeling 9 voxels changed in iteration 2 of unlikely voxel relabeling 0 voxels changed in iteration 3 of unlikely voxel relabeling 9989 voxels changed in iteration 0 of unlikely voxel relabeling 133 voxels changed in iteration 1 of unlikely voxel relabeling 13 voxels changed in iteration 2 of unlikely voxel relabeling 0 voxels changed in iteration 3 of unlikely voxel relabeling 9690 voxels changed in iteration 0 of unlikely voxel relabeling 189 voxels changed in iteration 1 of unlikely voxel relabeling 8 voxels changed in iteration 2 of unlikely voxel relabeling 0 voxels changed in iteration 3 of unlikely voxel relabeling 8910 voxels changed in iteration 0 of unlikely voxel relabeling 45 voxels changed in iteration 1 of unlikely voxel relabeling 13 voxels changed in iteration 2 of unlikely voxel relabeling 1 voxels changed in iteration 3 of unlikely voxel relabeling 0 voxels changed in iteration 4 of unlikely voxel relabeling MRItoUCHAR: min=0, max=85 MRItoUCHAR: converting to UCHAR writing labeled volume to aseg.auto_noCCseg.mgz mri_ca_label utimesec 5164.081696 mri_ca_label stimesec 61.446751 mri_ca_label ru_maxrss 2094996 mri_ca_label ru_ixrss 0 mri_ca_label ru_idrss 0 mri_ca_label ru_isrss 0 mri_ca_label ru_minflt 36357707 mri_ca_label ru_majflt 3 mri_ca_label ru_nswap 0 mri_ca_label ru_inblock 104 mri_ca_label ru_oublock 448 mri_ca_label ru_msgsnd 0 mri_ca_label ru_msgrcv 0 mri_ca_label ru_nsignals 0 mri_ca_label ru_nvcsw 739 mri_ca_label ru_nivcsw 9869 auto-labeling took 86 minutes and 26 seconds. mri_cc -aseg aseg.auto_noCCseg.mgz -o aseg.auto.mgz -lta /output/january_2021/subject1/mri/transforms/cc_up.lta subject1 will read input aseg from aseg.auto_noCCseg.mgz writing aseg with cc labels to aseg.auto.mgz will write lta as /output/january_2021/subject1/mri/transforms/cc_up.lta reading aseg from /output/january_2021/subject1/mri/aseg.auto_noCCseg.mgz reading norm from /output/january_2021/subject1/mri/norm.mgz 22939 voxels in left wm, 34111 in right wm, xrange [125, 133] searching rotation angles z=[-7 7], y=[-5 9] searching scale 1 Z rot -7.0 searching scale 1 Z rot -6.8 searching scale 1 Z rot -6.5 searching scale 1 Z rot -6.3 searching scale 1 Z rot -6.0 searching scale 1 Z rot -5.8 searching scale 1 Z rot -5.5 searching scale 1 Z rot -5.3 searching scale 1 Z rot -5.0 searching scale 1 Z rot -4.8 searching scale 1 Z rot -4.5 searching scale 1 Z rot -4.3 searching scale 1 Z rot -4.0 searching scale 1 Z rot -3.8 searching scale 1 Z rot -3.5 searching scale 1 Z rot -3.3 searching scale 1 Z rot -3.0 searching scale 1 Z rot -2.8 searching scale 1 Z rot -2.5 searching scale 1 Z rot -2.3 searching scale 1 Z rot -2.0 searching scale 1 Z rot -1.8 searching scale 1 Z rot -1.5 searching scale 1 Z rot -1.3 searching scale 1 Z rot -1.0 searching scale 1 Z rot -0.8 searching scale 1 Z rot -0.5 searching scale 1 Z rot -0.3 searching scale 1 Z rot -0.0 searching scale 1 Z rot 0.2 searching scale 1 Z rot 0.5 searching scale 1 Z rot 0.7 searching scale 1 Z rot 1.0 searching scale 1 Z rot 1.2 searching scale 1 Z rot 1.5 searching scale 1 Z rot 1.7 searching scale 1 Z rot 2.0 searching scale 1 Z rot 2.2 searching scale 1 Z rot 2.5 searching scale 1 Z rot 2.7 searching scale 1 Z rot 3.0 searching scale 1 Z rot 3.2 searching scale 1 Z rot 3.5 searching scale 1 Z rot 3.7 searching scale 1 Z rot 4.0 searching scale 1 Z rot 4.2 searching scale 1 Z rot 4.5 searching scale 1 Z rot 4.7 searching scale 1 Z rot 5.0 searching scale 1 Z rot 5.2 searching scale 1 Z rot 5.5 searching scale 1 Z rot 5.7 searching scale 1 Z rot 6.0 searching scale 1 Z rot 6.2 searching scale 1 Z rot 6.5 searching scale 1 Z rot 6.7 global minimum found at slice 129.5, rotations (2.35, -0.00) final transformation (x=129.5, yr=2.352, zr=-0.005): 0.99916 0.00008 0.04105 -5.78141; -0.00008 1.00000 -0.00000 49.01096; -0.04105 0.00000 0.99916 26.40545; 0.00000 0.00000 0.00000 1.00000; updating x range to be [125, 131] in xformed coordinates best xformed slice 128 cc center is found at 128 79 107 eigenvectors: -0.00161 0.00052 1.00000; -0.06983 -0.99756 0.00041; 0.99756 -0.06983 0.00164; writing aseg with callosum to /output/january_2021/subject1/mri/aseg.auto.mgz... corpus callosum segmentation took 0.7 minutes #-------------------------------------- #@# Merge ASeg Wed Feb 10 11:33:19 UTC 2021 cp aseg.auto.mgz aseg.presurf.mgz #-------------------------------------------- #@# Intensity Normalization2 Wed Feb 10 11:33:19 UTC 2021 /output/january_2021/subject1/mri mri_normalize -mprage -aseg aseg.presurf.mgz -mask brainmask.mgz norm.mgz brain.mgz assuming input volume is MGH (Van der Kouwe) MP-RAGE using segmentation for initial intensity normalization using MR volume brainmask.mgz to mask input volume... reading from norm.mgz... Reading aseg aseg.presurf.mgz normalizing image... processing with aseg removing outliers in the aseg WM... 1295 control points removed Building bias image building Voronoi diagram... performing soap bubble smoothing, sigma = 0... Smoothing with sigma 8 Applying bias correction building Voronoi diagram... performing soap bubble smoothing, sigma = 8... Iterating 2 times --------------------------------- 3d normalization pass 1 of 2 white matter peak found at 110 white matter peak found at 109 gm peak at 87 (87), valley at 68 (68) csf peak at 28, setting threshold to 67 building Voronoi diagram... performing soap bubble smoothing, sigma = 8... --------------------------------- 3d normalization pass 2 of 2 white matter peak found at 110 white matter peak found at 110 gm peak at 88 (88), valley at 36 (36) csf peak at 47, setting threshold to 74 building Voronoi diagram... performing soap bubble smoothing, sigma = 8... Done iterating --------------------------------- writing output to brain.mgz 3D bias adjustment took 4 minutes and 10 seconds. #-------------------------------------------- #@# Mask BFS Wed Feb 10 11:37:31 UTC 2021 /output/january_2021/subject1/mri mri_mask -T 5 brain.mgz brainmask.mgz brain.finalsurfs.mgz threshold mask volume at 5 DoAbs = 0 Found 1588523 voxels in mask (pct= 9.47) Writing masked volume to brain.finalsurfs.mgz...done. #-------------------------------------------- #@# WM Segmentation Wed Feb 10 11:37:33 UTC 2021 mri_segment -mprage brain.mgz wm.seg.mgz doing initial intensity segmentation... using local statistics to label ambiguous voxels... computing class statistics for intensity windows... WM (103.0): 104.3 +- 5.0 [79.0 --> 125.0] GM (73.0) : 71.1 +- 15.1 [30.0 --> 95.0] setting bottom of white matter range to 86.2 setting top of gray matter range to 101.3 doing initial intensity segmentation... using local statistics to label ambiguous voxels... using local geometry to label remaining ambiguous voxels... reclassifying voxels using Gaussian border classifier... removing voxels with positive offset direction... smoothing T1 volume with sigma = 0.250 removing 1-dimensional structures... 7318 sparsely connected voxels removed... thickening thin strands.... 20 segments, 2676 filled 1013 bright non-wm voxels segmented. 5004 diagonally connected voxels added... white matter segmentation took 2.2 minutes writing output to wm.seg.mgz... assuming input volume is MGH (Van der Kouwe) MP-RAGE mri_edit_wm_with_aseg -keep-in wm.seg.mgz brain.mgz aseg.presurf.mgz wm.asegedit.mgz preserving editing changes in input volume... auto filling took 2.91 minutes reading wm segmentation from wm.seg.mgz... 5798 voxels added to wm to prevent paths from MTL structures to cortex 5828 additional wm voxels added 0 additional wm voxels added SEG EDIT: 71732 voxels turned on, 11924 voxels turned off. propagating editing to output volume from wm.seg.mgz 115,126,128 old 0 new 0 115,126,128 old 0 new 0 writing edited volume to wm.asegedit.mgz.... mri_pretess wm.asegedit.mgz wm norm.mgz wm.mgz Iteration Number : 1 pass 1 (xy+): 109 found - 109 modified | TOTAL: 109 pass 2 (xy+): 0 found - 109 modified | TOTAL: 109 pass 1 (xy-): 162 found - 162 modified | TOTAL: 271 pass 2 (xy-): 0 found - 162 modified | TOTAL: 271 pass 1 (yz+): 86 found - 86 modified | TOTAL: 357 pass 2 (yz+): 0 found - 86 modified | TOTAL: 357 pass 1 (yz-): 113 found - 113 modified | TOTAL: 470 pass 2 (yz-): 0 found - 113 modified | TOTAL: 470 pass 1 (xz+): 79 found - 79 modified | TOTAL: 549 pass 2 (xz+): 0 found - 79 modified | TOTAL: 549 pass 1 (xz-): 97 found - 97 modified | TOTAL: 646 pass 2 (xz-): 0 found - 97 modified | TOTAL: 646 Iteration Number : 1 pass 1 (+++): 36 found - 36 modified | TOTAL: 36 pass 2 (+++): 0 found - 36 modified | TOTAL: 36 pass 1 (+++): 63 found - 63 modified | TOTAL: 99 pass 2 (+++): 0 found - 63 modified | TOTAL: 99 pass 1 (+++): 59 found - 59 modified | TOTAL: 158 pass 2 (+++): 0 found - 59 modified | TOTAL: 158 pass 1 (+++): 57 found - 57 modified | TOTAL: 215 pass 2 (+++): 0 found - 57 modified | TOTAL: 215 Iteration Number : 1 pass 1 (++): 166 found - 166 modified | TOTAL: 166 pass 2 (++): 0 found - 166 modified | TOTAL: 166 pass 1 (+-): 173 found - 173 modified | TOTAL: 339 pass 2 (+-): 3 found - 176 modified | TOTAL: 342 pass 3 (+-): 0 found - 176 modified | TOTAL: 342 pass 1 (--): 161 found - 161 modified | TOTAL: 503 pass 2 (--): 2 found - 163 modified | TOTAL: 505 pass 3 (--): 0 found - 163 modified | TOTAL: 505 pass 1 (-+): 123 found - 123 modified | TOTAL: 628 pass 2 (-+): 0 found - 123 modified | TOTAL: 628 Iteration Number : 2 pass 1 (xy+): 19 found - 19 modified | TOTAL: 19 pass 2 (xy+): 0 found - 19 modified | TOTAL: 19 pass 1 (xy-): 23 found - 23 modified | TOTAL: 42 pass 2 (xy-): 0 found - 23 modified | TOTAL: 42 pass 1 (yz+): 19 found - 19 modified | TOTAL: 61 pass 2 (yz+): 0 found - 19 modified | TOTAL: 61 pass 1 (yz-): 21 found - 21 modified | TOTAL: 82 pass 2 (yz-): 0 found - 21 modified | TOTAL: 82 pass 1 (xz+): 14 found - 14 modified | TOTAL: 96 pass 2 (xz+): 0 found - 14 modified | TOTAL: 96 pass 1 (xz-): 26 found - 26 modified | TOTAL: 122 pass 2 (xz-): 0 found - 26 modified | TOTAL: 122 Iteration Number : 2 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 4 found - 4 modified | TOTAL: 4 pass 2 (+++): 0 found - 4 modified | TOTAL: 4 pass 1 (+++): 3 found - 3 modified | TOTAL: 7 pass 2 (+++): 0 found - 3 modified | TOTAL: 7 pass 1 (+++): 5 found - 5 modified | TOTAL: 12 pass 2 (+++): 0 found - 5 modified | TOTAL: 12 Iteration Number : 2 pass 1 (++): 17 found - 17 modified | TOTAL: 17 pass 2 (++): 0 found - 17 modified | TOTAL: 17 pass 1 (+-): 9 found - 9 modified | TOTAL: 26 pass 2 (+-): 1 found - 10 modified | TOTAL: 27 pass 3 (+-): 0 found - 10 modified | TOTAL: 27 pass 1 (--): 8 found - 8 modified | TOTAL: 35 pass 2 (--): 0 found - 8 modified | TOTAL: 35 pass 1 (-+): 8 found - 8 modified | TOTAL: 43 pass 2 (-+): 0 found - 8 modified | TOTAL: 43 Iteration Number : 3 pass 1 (xy+): 2 found - 2 modified | TOTAL: 2 pass 2 (xy+): 0 found - 2 modified | TOTAL: 2 pass 1 (xy-): 1 found - 1 modified | TOTAL: 3 pass 2 (xy-): 0 found - 1 modified | TOTAL: 3 pass 1 (yz+): 0 found - 0 modified | TOTAL: 3 pass 1 (yz-): 0 found - 0 modified | TOTAL: 3 pass 1 (xz+): 3 found - 3 modified | TOTAL: 6 pass 2 (xz+): 0 found - 3 modified | TOTAL: 6 pass 1 (xz-): 0 found - 0 modified | TOTAL: 6 Iteration Number : 3 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 Iteration Number : 3 pass 1 (++): 0 found - 0 modified | TOTAL: 0 pass 1 (+-): 0 found - 0 modified | TOTAL: 0 pass 1 (--): 0 found - 0 modified | TOTAL: 0 pass 1 (-+): 1 found - 1 modified | TOTAL: 1 pass 2 (-+): 0 found - 1 modified | TOTAL: 1 Iteration Number : 4 pass 1 (xy+): 0 found - 0 modified | TOTAL: 0 pass 1 (xy-): 1 found - 1 modified | TOTAL: 1 pass 2 (xy-): 0 found - 1 modified | TOTAL: 1 pass 1 (yz+): 0 found - 0 modified | TOTAL: 1 pass 1 (yz-): 0 found - 0 modified | TOTAL: 1 pass 1 (xz+): 0 found - 0 modified | TOTAL: 1 pass 1 (xz-): 0 found - 0 modified | TOTAL: 1 Iteration Number : 4 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 Iteration Number : 4 pass 1 (++): 0 found - 0 modified | TOTAL: 0 pass 1 (+-): 1 found - 1 modified | TOTAL: 1 pass 2 (+-): 0 found - 1 modified | TOTAL: 1 pass 1 (--): 0 found - 0 modified | TOTAL: 1 pass 1 (-+): 0 found - 0 modified | TOTAL: 1 Iteration Number : 5 pass 1 (xy+): 0 found - 0 modified | TOTAL: 0 pass 1 (xy-): 0 found - 0 modified | TOTAL: 0 pass 1 (yz+): 0 found - 0 modified | TOTAL: 0 pass 1 (yz-): 0 found - 0 modified | TOTAL: 0 pass 1 (xz+): 0 found - 0 modified | TOTAL: 0 pass 1 (xz-): 0 found - 0 modified | TOTAL: 0 Iteration Number : 5 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 Iteration Number : 5 pass 1 (++): 0 found - 0 modified | TOTAL: 0 pass 1 (+-): 0 found - 0 modified | TOTAL: 0 pass 1 (--): 0 found - 0 modified | TOTAL: 0 pass 1 (-+): 0 found - 0 modified | TOTAL: 0 Total Number of Modified Voxels = 1675 (out of 549033: 0.305082) binarizing input wm segmentation... Ambiguous edge configurations... mri_pretess done #-------------------------------------------- #@# Fill Wed Feb 10 11:42:44 UTC 2021 /output/january_2021/subject1/mri mri_fill -a ../scripts/ponscc.cut.log -xform transforms/talairach.lta -segmentation aseg.auto_noCCseg.mgz wm.mgz filled.mgz logging cutting plane coordinates to ../scripts/ponscc.cut.log... INFO: Using transforms/talairach.lta and its offset for Talairach volume ... using segmentation aseg.auto_noCCseg.mgz... reading input volume...done. searching for cutting planes...voxel to talairach voxel transform 1.00430 -0.00865 -0.00031 -3.19983; 0.00885 1.07914 0.29667 -15.85155; 0.00173 -0.27149 0.98244 22.61639; 0.00000 0.00000 0.00000 1.00000; voxel to talairach voxel transform 1.00430 -0.00865 -0.00031 -3.19983; 0.00885 1.07914 0.29667 -15.85155; 0.00173 -0.27149 0.98244 22.61639; 0.00000 0.00000 0.00000 1.00000; reading segmented volume aseg.auto_noCCseg.mgz... Looking for area (min, max) = (350, 1400) area[0] = 1338 (min = 350, max = 1400), aspect = 0.60 (min = 0.10, max = 0.75) no need to search using seed (124, 120, 151), TAL = (4.0, 23.0, 8.0) talairach voxel to voxel transform 0.99565 0.00749 -0.00195 3.34877; -0.00714 0.86118 -0.26006 19.50973; -0.00373 0.23796 0.94601 -17.63516; 0.00000 0.00000 0.00000 1.00000; segmentation indicates cc at (124, 120, 151) --> (4.0, 23.0, 8.0) done. writing output to filled.mgz... filling took 0.8 minutes talairach cc position changed to (4.00, 23.00, 8.00) Erasing brainstem...done. seed_search_size = 9, min_neighbors = 5 search rh wm seed point around talairach space:(22.00, 23.00, 8.00) SRC: (109.49, 82.83, 153.37) search lh wm seed point around talairach space (-14.00, 23.00, 8.00), SRC: (145.34, 82.57, 153.24) compute mri_fill using aseg Erasing Brain Stem and Cerebellum ... Define left and right masks using aseg: Building Voronoi diagram ... Using the Voronoi diagram to separate WM into two hemispheres ... Find the largest connected component for each hemisphere ... #-------------------------------------------- #@# Tessellate lh Wed Feb 10 11:43:34 UTC 2021 /output/january_2021/subject1/scripts mri_pretess ../mri/filled.mgz 255 ../mri/norm.mgz ../mri/filled-pretess255.mgz Iteration Number : 1 pass 1 (xy+): 6 found - 6 modified | TOTAL: 6 pass 2 (xy+): 0 found - 6 modified | TOTAL: 6 pass 1 (xy-): 2 found - 2 modified | TOTAL: 8 pass 2 (xy-): 0 found - 2 modified | TOTAL: 8 pass 1 (yz+): 3 found - 3 modified | TOTAL: 11 pass 2 (yz+): 0 found - 3 modified | TOTAL: 11 pass 1 (yz-): 6 found - 6 modified | TOTAL: 17 pass 2 (yz-): 0 found - 6 modified | TOTAL: 17 pass 1 (xz+): 3 found - 3 modified | TOTAL: 20 pass 2 (xz+): 0 found - 3 modified | TOTAL: 20 pass 1 (xz-): 4 found - 4 modified | TOTAL: 24 pass 2 (xz-): 0 found - 4 modified | TOTAL: 24 Iteration Number : 1 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 Iteration Number : 1 pass 1 (++): 3 found - 3 modified | TOTAL: 3 pass 2 (++): 0 found - 3 modified | TOTAL: 3 pass 1 (+-): 1 found - 1 modified | TOTAL: 4 pass 2 (+-): 0 found - 1 modified | TOTAL: 4 pass 1 (--): 2 found - 2 modified | TOTAL: 6 pass 2 (--): 0 found - 2 modified | TOTAL: 6 pass 1 (-+): 1 found - 1 modified | TOTAL: 7 pass 2 (-+): 0 found - 1 modified | TOTAL: 7 Iteration Number : 2 pass 1 (xy+): 1 found - 1 modified | TOTAL: 1 pass 2 (xy+): 0 found - 1 modified | TOTAL: 1 pass 1 (xy-): 0 found - 0 modified | TOTAL: 1 pass 1 (yz+): 0 found - 0 modified | TOTAL: 1 pass 1 (yz-): 0 found - 0 modified | TOTAL: 1 pass 1 (xz+): 0 found - 0 modified | TOTAL: 1 pass 1 (xz-): 0 found - 0 modified | TOTAL: 1 Iteration Number : 2 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 Iteration Number : 2 pass 1 (++): 0 found - 0 modified | TOTAL: 0 pass 1 (+-): 0 found - 0 modified | TOTAL: 0 pass 1 (--): 0 found - 0 modified | TOTAL: 0 pass 1 (-+): 0 found - 0 modified | TOTAL: 0 Iteration Number : 3 pass 1 (xy+): 0 found - 0 modified | TOTAL: 0 pass 1 (xy-): 0 found - 0 modified | TOTAL: 0 pass 1 (yz+): 0 found - 0 modified | TOTAL: 0 pass 1 (yz-): 0 found - 0 modified | TOTAL: 0 pass 1 (xz+): 0 found - 0 modified | TOTAL: 0 pass 1 (xz-): 0 found - 0 modified | TOTAL: 0 Iteration Number : 3 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 Iteration Number : 3 pass 1 (++): 0 found - 0 modified | TOTAL: 0 pass 1 (+-): 0 found - 0 modified | TOTAL: 0 pass 1 (--): 0 found - 0 modified | TOTAL: 0 pass 1 (-+): 0 found - 0 modified | TOTAL: 0 Total Number of Modified Voxels = 32 (out of 270439: 0.011833) Ambiguous edge configurations... mri_pretess done mri_tessellate ../mri/filled-pretess255.mgz 255 ../surf/lh.orig.nofix $Id: mri_tessellate.c,v 1.38.2.1 2016/07/26 18:46:38 zkaufman Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ slice 50: 2954 vertices, 3153 faces slice 60: 12452 vertices, 12891 faces slice 70: 22718 vertices, 23098 faces slice 80: 32362 vertices, 32749 faces slice 90: 42571 vertices, 43021 faces slice 100: 53386 vertices, 53932 faces slice 110: 64865 vertices, 65437 faces slice 120: 75557 vertices, 76090 faces slice 130: 86459 vertices, 87050 faces slice 140: 95983 vertices, 96548 faces slice 150: 105001 vertices, 105519 faces slice 160: 112992 vertices, 113547 faces slice 170: 120458 vertices, 120917 faces slice 180: 126869 vertices, 127327 faces slice 190: 131814 vertices, 132181 faces slice 200: 132726 vertices, 132982 faces slice 210: 132726 vertices, 132982 faces slice 220: 132726 vertices, 132982 faces slice 230: 132726 vertices, 132982 faces slice 240: 132726 vertices, 132982 faces slice 250: 132726 vertices, 132982 faces using the conformed surface RAS to save vertex points... writing ../surf/lh.orig.nofix using vox2ras matrix: -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 1.00000 -128.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; rm -f ../mri/filled-pretess255.mgz mris_extract_main_component ../surf/lh.orig.nofix ../surf/lh.orig.nofix counting number of connected components... 132718 voxel in cpt #1: X=-258 [v=132718,e=398928,f=265952] located at (-28.058455, -15.842621, 40.791565) 8 voxel in cpt #2: X=2 [v=8,e=18,f=12] located at (0.000000, 30.000000, 44.000000) For the whole surface: X=-256 [v=132726,e=398946,f=265964] 2 components have been found keeping component #1 with 132718 vertices done #-------------------------------------------- #@# Tessellate rh Wed Feb 10 11:43:42 UTC 2021 /output/january_2021/subject1/scripts mri_pretess ../mri/filled.mgz 127 ../mri/norm.mgz ../mri/filled-pretess127.mgz Iteration Number : 1 pass 1 (xy+): 6 found - 6 modified | TOTAL: 6 pass 2 (xy+): 0 found - 6 modified | TOTAL: 6 pass 1 (xy-): 2 found - 2 modified | TOTAL: 8 pass 2 (xy-): 0 found - 2 modified | TOTAL: 8 pass 1 (yz+): 5 found - 5 modified | TOTAL: 13 pass 2 (yz+): 0 found - 5 modified | TOTAL: 13 pass 1 (yz-): 6 found - 6 modified | TOTAL: 19 pass 2 (yz-): 0 found - 6 modified | TOTAL: 19 pass 1 (xz+): 6 found - 6 modified | TOTAL: 25 pass 2 (xz+): 0 found - 6 modified | TOTAL: 25 pass 1 (xz-): 9 found - 9 modified | TOTAL: 34 pass 2 (xz-): 0 found - 9 modified | TOTAL: 34 Iteration Number : 1 pass 1 (+++): 2 found - 2 modified | TOTAL: 2 pass 2 (+++): 0 found - 2 modified | TOTAL: 2 pass 1 (+++): 1 found - 1 modified | TOTAL: 3 pass 2 (+++): 0 found - 1 modified | TOTAL: 3 pass 1 (+++): 0 found - 0 modified | TOTAL: 3 pass 1 (+++): 2 found - 2 modified | TOTAL: 5 pass 2 (+++): 0 found - 2 modified | TOTAL: 5 Iteration Number : 1 pass 1 (++): 0 found - 0 modified | TOTAL: 0 pass 1 (+-): 3 found - 3 modified | TOTAL: 3 pass 2 (+-): 0 found - 3 modified | TOTAL: 3 pass 1 (--): 3 found - 3 modified | TOTAL: 6 pass 2 (--): 0 found - 3 modified | TOTAL: 6 pass 1 (-+): 3 found - 3 modified | TOTAL: 9 pass 2 (-+): 0 found - 3 modified | TOTAL: 9 Iteration Number : 2 pass 1 (xy+): 0 found - 0 modified | TOTAL: 0 pass 1 (xy-): 1 found - 1 modified | TOTAL: 1 pass 2 (xy-): 0 found - 1 modified | TOTAL: 1 pass 1 (yz+): 0 found - 0 modified | TOTAL: 1 pass 1 (yz-): 0 found - 0 modified | TOTAL: 1 pass 1 (xz+): 0 found - 0 modified | TOTAL: 1 pass 1 (xz-): 1 found - 1 modified | TOTAL: 2 pass 2 (xz-): 0 found - 1 modified | TOTAL: 2 Iteration Number : 2 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 Iteration Number : 2 pass 1 (++): 0 found - 0 modified | TOTAL: 0 pass 1 (+-): 0 found - 0 modified | TOTAL: 0 pass 1 (--): 0 found - 0 modified | TOTAL: 0 pass 1 (-+): 3 found - 3 modified | TOTAL: 3 pass 2 (-+): 0 found - 3 modified | TOTAL: 3 Iteration Number : 3 pass 1 (xy+): 0 found - 0 modified | TOTAL: 0 pass 1 (xy-): 0 found - 0 modified | TOTAL: 0 pass 1 (yz+): 0 found - 0 modified | TOTAL: 0 pass 1 (yz-): 0 found - 0 modified | TOTAL: 0 pass 1 (xz+): 0 found - 0 modified | TOTAL: 0 pass 1 (xz-): 0 found - 0 modified | TOTAL: 0 Iteration Number : 3 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 pass 1 (+++): 0 found - 0 modified | TOTAL: 0 Iteration Number : 3 pass 1 (++): 0 found - 0 modified | TOTAL: 0 pass 1 (+-): 0 found - 0 modified | TOTAL: 0 pass 1 (--): 0 found - 0 modified | TOTAL: 0 pass 1 (-+): 0 found - 0 modified | TOTAL: 0 Total Number of Modified Voxels = 53 (out of 275832: 0.019215) Ambiguous edge configurations... mri_pretess done mri_tessellate ../mri/filled-pretess127.mgz 127 ../surf/rh.orig.nofix $Id: mri_tessellate.c,v 1.38.2.1 2016/07/26 18:46:38 zkaufman Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ slice 50: 4536 vertices, 4824 faces slice 60: 15708 vertices, 16150 faces slice 70: 27881 vertices, 28305 faces slice 80: 39127 vertices, 39576 faces slice 90: 50230 vertices, 50688 faces slice 100: 60710 vertices, 61185 faces slice 110: 71417 vertices, 71905 faces slice 120: 82351 vertices, 82980 faces slice 130: 93788 vertices, 94456 faces slice 140: 103891 vertices, 104477 faces slice 150: 111379 vertices, 111900 faces slice 160: 118430 vertices, 118998 faces slice 170: 125896 vertices, 126473 faces slice 180: 131949 vertices, 132446 faces slice 190: 136166 vertices, 136585 faces slice 200: 136992 vertices, 137308 faces slice 210: 136992 vertices, 137308 faces slice 220: 136992 vertices, 137308 faces slice 230: 136992 vertices, 137308 faces slice 240: 136992 vertices, 137308 faces slice 250: 136992 vertices, 137308 faces using the conformed surface RAS to save vertex points... writing ../surf/rh.orig.nofix using vox2ras matrix: -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 1.00000 -128.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; rm -f ../mri/filled-pretess127.mgz mris_extract_main_component ../surf/rh.orig.nofix ../surf/rh.orig.nofix counting number of connected components... 136992 voxel in cpt #1: X=-316 [v=136992,e=411924,f=274616] located at (25.454603, -19.679586, 41.590969) For the whole surface: X=-316 [v=136992,e=411924,f=274616] One single component has been found nothing to do done #-------------------------------------------- #@# Smooth1 lh Wed Feb 10 11:43:50 UTC 2021 /output/january_2021/subject1/scripts mris_smooth -nw -seed 1234 ../surf/lh.orig.nofix ../surf/lh.smoothwm.nofix #-------------------------------------------- #@# Smooth1 rh Wed Feb 10 11:43:50 UTC 2021 /output/january_2021/subject1/scripts mris_smooth -nw -seed 1234 ../surf/rh.orig.nofix ../surf/rh.smoothwm.nofix Waiting for PID 78008 of (78008 78013) to complete... Waiting for PID 78013 of (78008 78013) to complete... mris_smooth -nw -seed 1234 ../surf/lh.orig.nofix ../surf/lh.smoothwm.nofix setting seed for random number generator to 1234 smoothing surface tessellation for 10 iterations... smoothing complete - recomputing first and second fundamental forms... mris_smooth -nw -seed 1234 ../surf/rh.orig.nofix ../surf/rh.smoothwm.nofix setting seed for random number generator to 1234 smoothing surface tessellation for 10 iterations... smoothing complete - recomputing first and second fundamental forms... PIDs (78008 78013) completed and logs appended. #-------------------------------------------- #@# Inflation1 lh Wed Feb 10 11:43:58 UTC 2021 /output/january_2021/subject1/scripts mris_inflate -no-save-sulc ../surf/lh.smoothwm.nofix ../surf/lh.inflated.nofix #-------------------------------------------- #@# Inflation1 rh Wed Feb 10 11:43:58 UTC 2021 /output/january_2021/subject1/scripts mris_inflate -no-save-sulc ../surf/rh.smoothwm.nofix ../surf/rh.inflated.nofix Waiting for PID 78072 of (78072 78075) to complete... Waiting for PID 78075 of (78072 78075) to complete... mris_inflate -no-save-sulc ../surf/lh.smoothwm.nofix ../surf/lh.inflated.nofix Not saving sulc Reading ../surf/lh.smoothwm.nofix avg radius = 47.1 mm, total surface area = 67685 mm^2 writing inflated surface to ../surf/lh.inflated.nofix inflation took 0.7 minutes step 000: RMS=0.176 (target=0.015) step 005: RMS=0.138 (target=0.015) step 010: RMS=0.113 (target=0.015) step 015: RMS=0.100 (target=0.015) step 020: RMS=0.092 (target=0.015) step 025: RMS=0.086 (target=0.015) step 030: RMS=0.082 (target=0.015) step 035: RMS=0.079 (target=0.015) step 040: RMS=0.078 (target=0.015) step 045: RMS=0.077 (target=0.015) step 050: RMS=0.076 (target=0.015) step 055: RMS=0.075 (target=0.015) step 060: RMS=0.075 (target=0.015) inflation complete. Not saving sulc mris_inflate utimesec 69.965571 mris_inflate stimesec 0.867546 mris_inflate ru_maxrss 210988 mris_inflate ru_ixrss 0 mris_inflate ru_idrss 0 mris_inflate ru_isrss 0 mris_inflate ru_minflt 638243 mris_inflate ru_majflt 0 mris_inflate ru_nswap 0 mris_inflate ru_inblock 0 mris_inflate ru_oublock 9368 mris_inflate ru_msgsnd 0 mris_inflate ru_msgrcv 0 mris_inflate ru_nsignals 0 mris_inflate ru_nvcsw 3900 mris_inflate ru_nivcsw 2962 mris_inflate -no-save-sulc ../surf/rh.smoothwm.nofix ../surf/rh.inflated.nofix Not saving sulc Reading ../surf/rh.smoothwm.nofix avg radius = 47.5 mm, total surface area = 69868 mm^2 writing inflated surface to ../surf/rh.inflated.nofix inflation took 0.5 minutes step 000: RMS=0.177 (target=0.015) step 005: RMS=0.138 (target=0.015) step 010: RMS=0.113 (target=0.015) step 015: RMS=0.102 (target=0.015) step 020: RMS=0.095 (target=0.015) step 025: RMS=0.089 (target=0.015) step 030: RMS=0.085 (target=0.015) step 035: RMS=0.082 (target=0.015) step 040: RMS=0.081 (target=0.015) step 045: RMS=0.079 (target=0.015) step 050: RMS=0.078 (target=0.015) step 055: RMS=0.078 (target=0.015) step 060: RMS=0.078 (target=0.015) inflation complete. Not saving sulc mris_inflate utimesec 68.968438 mris_inflate stimesec 0.963302 mris_inflate ru_maxrss 218128 mris_inflate ru_ixrss 0 mris_inflate ru_idrss 0 mris_inflate ru_isrss 0 mris_inflate ru_minflt 380471 mris_inflate ru_majflt 0 mris_inflate ru_nswap 0 mris_inflate ru_inblock 0 mris_inflate ru_oublock 9672 mris_inflate ru_msgsnd 0 mris_inflate ru_msgrcv 0 mris_inflate ru_nsignals 0 mris_inflate ru_nvcsw 11756 mris_inflate ru_nivcsw 1761 PIDs (78072 78075) completed and logs appended. #-------------------------------------------- #@# QSphere lh Wed Feb 10 11:44:39 UTC 2021 /output/january_2021/subject1/scripts mris_sphere -q -seed 1234 ../surf/lh.inflated.nofix ../surf/lh.qsphere.nofix #-------------------------------------------- #@# QSphere rh Wed Feb 10 11:44:39 UTC 2021 /output/january_2021/subject1/scripts mris_sphere -q -seed 1234 ../surf/rh.inflated.nofix ../surf/rh.qsphere.nofix Waiting for PID 78194 of (78194 78200) to complete... Waiting for PID 78200 of (78194 78200) to complete... mris_sphere -q -seed 1234 ../surf/lh.inflated.nofix ../surf/lh.qsphere.nofix doing quick spherical unfolding. setting seed for random number genererator to 1234 $Id: mris_sphere.c,v 1.61 2016/01/20 23:42:15 greve Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading original vertex positions... unfolding cortex into spherical form... surface projected - minimizing metric distortion... vertex spacing 0.98 +- 0.66 (0.00-->7.95) (max @ vno 63391 --> 63397) face area 0.03 +- 0.05 (-0.34-->1.22) == Number of threads available to mris_sphere for OpenMP = 4 == scaling brain by 0.347... inflating to sphere (rms error < 2.00) 000: dt: 0.0000, rms radial error=175.221, avgs=0 005/300: dt: 0.9000, rms radial error=174.962, avgs=0 010/300: dt: 0.9000, rms radial error=174.407, avgs=0 015/300: dt: 0.9000, rms radial error=173.677, avgs=0 020/300: dt: 0.9000, rms radial error=172.847, avgs=0 025/300: dt: 0.9000, rms radial error=171.958, avgs=0 030/300: dt: 0.9000, rms radial error=171.038, avgs=0 035/300: dt: 0.9000, rms radial error=170.102, avgs=0 040/300: dt: 0.9000, rms radial error=169.157, avgs=0 045/300: dt: 0.9000, rms radial error=168.210, avgs=0 050/300: dt: 0.9000, rms radial error=167.264, avgs=0 055/300: dt: 0.9000, rms radial error=166.321, avgs=0 060/300: dt: 0.9000, rms radial error=165.381, avgs=0 065/300: dt: 0.9000, rms radial error=164.446, avgs=0 070/300: dt: 0.9000, rms radial error=163.516, avgs=0 075/300: dt: 0.9000, rms radial error=162.591, avgs=0 080/300: dt: 0.9000, rms radial error=161.671, avgs=0 085/300: dt: 0.9000, rms radial error=160.755, avgs=0 090/300: dt: 0.9000, rms radial error=159.845, avgs=0 095/300: dt: 0.9000, rms radial error=158.939, avgs=0 100/300: dt: 0.9000, rms radial error=158.039, avgs=0 105/300: dt: 0.9000, rms radial error=157.143, avgs=0 110/300: dt: 0.9000, rms radial error=156.253, avgs=0 115/300: dt: 0.9000, rms radial error=155.367, avgs=0 120/300: dt: 0.9000, rms radial error=154.487, avgs=0 125/300: dt: 0.9000, rms radial error=153.612, avgs=0 130/300: dt: 0.9000, rms radial error=152.741, avgs=0 135/300: dt: 0.9000, rms radial error=151.875, avgs=0 140/300: dt: 0.9000, rms radial error=151.014, avgs=0 145/300: dt: 0.9000, rms radial error=150.157, avgs=0 150/300: dt: 0.9000, rms radial error=149.305, avgs=0 155/300: dt: 0.9000, rms radial error=148.458, avgs=0 160/300: dt: 0.9000, rms radial error=147.617, avgs=0 165/300: dt: 0.9000, rms radial error=146.784, avgs=0 170/300: dt: 0.9000, rms radial error=145.954, avgs=0 175/300: dt: 0.9000, rms radial error=145.130, avgs=0 180/300: dt: 0.9000, rms radial error=144.310, avgs=0 185/300: dt: 0.9000, rms radial error=143.494, avgs=0 190/300: dt: 0.9000, rms radial error=142.683, avgs=0 195/300: dt: 0.9000, rms radial error=141.877, avgs=0 200/300: dt: 0.9000, rms radial error=141.075, avgs=0 205/300: dt: 0.9000, rms radial error=140.277, avgs=0 210/300: dt: 0.9000, rms radial error=139.484, avgs=0 215/300: dt: 0.9000, rms radial error=138.695, avgs=0 220/300: dt: 0.9000, rms radial error=137.910, avgs=0 225/300: dt: 0.9000, rms radial error=137.130, avgs=0 230/300: dt: 0.9000, rms radial error=136.355, avgs=0 235/300: dt: 0.9000, rms radial error=135.583, avgs=0 240/300: dt: 0.9000, rms radial error=134.816, avgs=0 245/300: dt: 0.9000, rms radial error=134.053, avgs=0 250/300: dt: 0.9000, rms radial error=133.294, avgs=0 255/300: dt: 0.9000, rms radial error=132.540, avgs=0 260/300: dt: 0.9000, rms radial error=131.790, avgs=0 265/300: dt: 0.9000, rms radial error=131.044, avgs=0 270/300: dt: 0.9000, rms radial error=130.303, avgs=0 275/300: dt: 0.9000, rms radial error=129.565, avgs=0 280/300: dt: 0.9000, rms radial error=128.832, avgs=0 285/300: dt: 0.9000, rms radial error=128.102, avgs=0 290/300: dt: 0.9000, rms radial error=127.377, avgs=0 295/300: dt: 0.9000, rms radial error=126.656, avgs=0 300/300: dt: 0.9000, rms radial error=125.939, avgs=0 spherical inflation complete. epoch 1 (K=10.0), pass 1, starting sse = 15331.74 taking momentum steps... taking momentum steps... taking momentum steps... pass 1 complete, delta sse/iter = 0.00/10 = 0.00017 epoch 2 (K=40.0), pass 1, starting sse = 2666.89 taking momentum steps... taking momentum steps... taking momentum steps... pass 1 complete, delta sse/iter = 0.01/10 = 0.00052 epoch 3 (K=160.0), pass 1, starting sse = 359.36 taking momentum steps... taking momentum steps... taking momentum steps... pass 1 complete, delta sse/iter = 0.04/10 = 0.00404 epoch 4 (K=640.0), pass 1, starting sse = 75.10 taking momentum steps... taking momentum steps... taking momentum steps... pass 1 complete, delta sse/iter = 0.15/12 = 0.01237 final distance error %29.12 writing spherical brain to ../surf/lh.qsphere.nofix spherical transformation took 0.06 hours mris_sphere utimesec 368.614637 mris_sphere stimesec 2.976725 mris_sphere ru_maxrss 211584 mris_sphere ru_ixrss 0 mris_sphere ru_idrss 0 mris_sphere ru_isrss 0 mris_sphere ru_minflt 1814997 mris_sphere ru_majflt 0 mris_sphere ru_nswap 0 mris_sphere ru_inblock 0 mris_sphere ru_oublock 9392 mris_sphere ru_msgsnd 0 mris_sphere ru_msgrcv 0 mris_sphere ru_nsignals 0 mris_sphere ru_nvcsw 25772 mris_sphere ru_nivcsw 16825 FSRUNTIME@ mris_sphere 0.0603 hours 1 threads mris_sphere -q -seed 1234 ../surf/rh.inflated.nofix ../surf/rh.qsphere.nofix doing quick spherical unfolding. setting seed for random number genererator to 1234 $Id: mris_sphere.c,v 1.61 2016/01/20 23:42:15 greve Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading original vertex positions... unfolding cortex into spherical form... surface projected - minimizing metric distortion... vertex spacing 0.97 +- 0.65 (0.00-->7.77) (max @ vno 90002 --> 90013) face area 0.03 +- 0.05 (-0.31-->1.02) == Number of threads available to mris_sphere for OpenMP = 4 == scaling brain by 0.338... inflating to sphere (rms error < 2.00) 000: dt: 0.0000, rms radial error=175.366, avgs=0 005/300: dt: 0.9000, rms radial error=175.107, avgs=0 010/300: dt: 0.9000, rms radial error=174.552, avgs=0 015/300: dt: 0.9000, rms radial error=173.823, avgs=0 020/300: dt: 0.9000, rms radial error=172.993, avgs=0 025/300: dt: 0.9000, rms radial error=172.104, avgs=0 030/300: dt: 0.9000, rms radial error=171.182, avgs=0 035/300: dt: 0.9000, rms radial error=170.242, avgs=0 040/300: dt: 0.9000, rms radial error=169.294, avgs=0 045/300: dt: 0.9000, rms radial error=168.350, avgs=0 050/300: dt: 0.9000, rms radial error=167.407, avgs=0 055/300: dt: 0.9000, rms radial error=166.466, avgs=0 060/300: dt: 0.9000, rms radial error=165.529, avgs=0 065/300: dt: 0.9000, rms radial error=164.596, avgs=0 070/300: dt: 0.9000, rms radial error=163.667, avgs=0 075/300: dt: 0.9000, rms radial error=162.743, avgs=0 080/300: dt: 0.9000, rms radial error=161.825, avgs=0 085/300: dt: 0.9000, rms radial error=160.911, avgs=0 090/300: dt: 0.9000, rms radial error=160.003, avgs=0 095/300: dt: 0.9000, rms radial error=159.100, avgs=0 100/300: dt: 0.9000, rms radial error=158.201, avgs=0 105/300: dt: 0.9000, rms radial error=157.308, avgs=0 110/300: dt: 0.9000, rms radial error=156.420, avgs=0 115/300: dt: 0.9000, rms radial error=155.536, avgs=0 120/300: dt: 0.9000, rms radial error=154.659, avgs=0 125/300: dt: 0.9000, rms radial error=153.786, avgs=0 130/300: dt: 0.9000, rms radial error=152.919, avgs=0 135/300: dt: 0.9000, rms radial error=152.056, avgs=0 140/300: dt: 0.9000, rms radial error=151.198, avgs=0 145/300: dt: 0.9000, rms radial error=150.345, avgs=0 150/300: dt: 0.9000, rms radial error=149.496, avgs=0 155/300: dt: 0.9000, rms radial error=148.653, avgs=0 160/300: dt: 0.9000, rms radial error=147.815, avgs=0 165/300: dt: 0.9000, rms radial error=146.981, avgs=0 170/300: dt: 0.9000, rms radial error=146.153, avgs=0 175/300: dt: 0.9000, rms radial error=145.329, avgs=0 180/300: dt: 0.9000, rms radial error=144.509, avgs=0 185/300: dt: 0.9000, rms radial error=143.695, avgs=0 190/300: dt: 0.9000, rms radial error=142.884, avgs=0 195/300: dt: 0.9000, rms radial error=142.079, avgs=0 200/300: dt: 0.9000, rms radial error=141.278, avgs=0 205/300: dt: 0.9000, rms radial error=140.482, avgs=0 210/300: dt: 0.9000, rms radial error=139.690, avgs=0 215/300: dt: 0.9000, rms radial error=138.903, avgs=0 220/300: dt: 0.9000, rms radial error=138.120, avgs=0 225/300: dt: 0.9000, rms radial error=137.341, avgs=0 230/300: dt: 0.9000, rms radial error=136.567, avgs=0 235/300: dt: 0.9000, rms radial error=135.798, avgs=0 240/300: dt: 0.9000, rms radial error=135.032, avgs=0 245/300: dt: 0.9000, rms radial error=134.271, avgs=0 250/300: dt: 0.9000, rms radial error=133.514, avgs=0 255/300: dt: 0.9000, rms radial error=132.761, avgs=0 260/300: dt: 0.9000, rms radial error=132.013, avgs=0 265/300: dt: 0.9000, rms radial error=131.269, avgs=0 270/300: dt: 0.9000, rms radial error=130.528, avgs=0 275/300: dt: 0.9000, rms radial error=129.792, avgs=0 280/300: dt: 0.9000, rms radial error=129.061, avgs=0 285/300: dt: 0.9000, rms radial error=128.333, avgs=0 290/300: dt: 0.9000, rms radial error=127.609, avgs=0 295/300: dt: 0.9000, rms radial error=126.889, avgs=0 300/300: dt: 0.9000, rms radial error=126.174, avgs=0 spherical inflation complete. epoch 1 (K=10.0), pass 1, starting sse = 15961.50 taking momentum steps... taking momentum steps... taking momentum steps... pass 1 complete, delta sse/iter = 0.00/10 = 0.00012 epoch 2 (K=40.0), pass 1, starting sse = 2835.46 taking momentum steps... taking momentum steps... taking momentum steps... pass 1 complete, delta sse/iter = 0.01/10 = 0.00056 epoch 3 (K=160.0), pass 1, starting sse = 397.54 taking momentum steps... taking momentum steps... taking momentum steps... pass 1 complete, delta sse/iter = 0.06/11 = 0.00590 epoch 4 (K=640.0), pass 1, starting sse = 73.87 taking momentum steps... taking momentum steps... taking momentum steps... pass 1 complete, delta sse/iter = 0.18/15 = 0.01194 final distance error %30.34 writing spherical brain to ../surf/rh.qsphere.nofix spherical transformation took 0.06 hours mris_sphere utimesec 395.869047 mris_sphere stimesec 2.697574 mris_sphere ru_maxrss 218600 mris_sphere ru_ixrss 0 mris_sphere ru_idrss 0 mris_sphere ru_isrss 0 mris_sphere ru_minflt 1664682 mris_sphere ru_majflt 0 mris_sphere ru_nswap 0 mris_sphere ru_inblock 0 mris_sphere ru_oublock 9704 mris_sphere ru_msgsnd 0 mris_sphere ru_msgrcv 0 mris_sphere ru_nsignals 0 mris_sphere ru_nvcsw 24144 mris_sphere ru_nivcsw 17655 FSRUNTIME@ mris_sphere 0.0626 hours 1 threads PIDs (78194 78200) completed and logs appended. #-------------------------------------------- #@# Fix Topology Copy lh Wed Feb 10 11:48:24 UTC 2021 /output/january_2021/subject1/scripts cp ../surf/lh.orig.nofix ../surf/lh.orig cp ../surf/lh.inflated.nofix ../surf/lh.inflated #-------------------------------------------- #@# Fix Topology Copy rh Wed Feb 10 11:48:25 UTC 2021 /output/january_2021/subject1/scripts cp ../surf/rh.orig.nofix ../surf/rh.orig cp ../surf/rh.inflated.nofix ../surf/rh.inflated #@# Fix Topology lh Wed Feb 10 11:48:25 UTC 2021 mris_fix_topology -rusage /output/january_2021/subject1/touch/rusage.mris_fix_topology.lh.dat -mgz -sphere qsphere.nofix -ga -seed 1234 subject1 lh #@# Fix Topology rh Wed Feb 10 11:48:25 UTC 2021 mris_fix_topology -rusage /output/january_2021/subject1/touch/rusage.mris_fix_topology.rh.dat -mgz -sphere qsphere.nofix -ga -seed 1234 subject1 rh Waiting for PID 78692 of (78692 78695) to complete... Waiting for PID 78695 of (78692 78695) to complete... mris_fix_topology -rusage /output/january_2021/subject1/touch/rusage.mris_fix_topology.lh.dat -mgz -sphere qsphere.nofix -ga -seed 1234 subject1 lh reading spherical homeomorphism from 'qsphere.nofix' using genetic algorithm with optimized parameters setting seed for random number genererator to 1234 ************************************************************* Topology Correction Parameters retessellation mode: genetic search number of patches/generation : 10 number of generations : 10 surface mri loglikelihood coefficient : 1.0 volume mri loglikelihood coefficient : 10.0 normal dot loglikelihood coefficient : 1.0 quadratic curvature loglikelihood coefficient : 1.0 volume resolution : 2 eliminate vertices during search : 1 initial patch selection : 1 select all defect vertices : 0 ordering dependant retessellation: 0 use precomputed edge table : 0 smooth retessellated patch : 2 match retessellated patch : 1 verbose mode : 0 ************************************************************* INFO: assuming .mgz format $Id: mris_fix_topology.c,v 1.50.2.1 2016/10/27 22:25:58 zkaufman Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ before topology correction, eno=-258 (nv=132718, nf=265952, ne=398928, g=130) using quasi-homeomorphic spherical map to tessellate cortical surface... Correction of the Topology Finding true center and radius of Spherical Surface...done Surface centered at (0,0,0) with radius 100.0 in 12 iterations marking ambiguous vertices... 32680 ambiguous faces found in tessellation segmenting defects... 100 defects found, arbitrating ambiguous regions... analyzing neighboring defects... -merging segment 24 into 3 -merging segment 36 into 21 -merging segment 37 into 21 -merging segment 54 into 21 -merging segment 34 into 32 -merging segment 53 into 52 -merging segment 57 into 52 -merging segment 74 into 72 -merging segment 85 into 73 91 defects to be corrected 0 vertices coincident reading input surface /output/january_2021/subject1/surf/lh.qsphere.nofix... reading brain volume from brain... reading wm segmentation from wm... Computing Initial Surface Statistics -face loglikelihood: -8.9759 (-4.4880) -vertex loglikelihood: -6.2065 (-3.1032) -normal dot loglikelihood: -3.5529 (-3.5529) -quad curv loglikelihood: -6.0389 (-3.0195) Total Loglikelihood : -24.7742 CORRECTING DEFECT 0 (vertices=3600, convex hull=1007, v0=28) XL defect detected... After retessellation of defect 0 (v0=28), euler #=-86 (115278,341990,226626) : difference with theory (-88) = -2 CORRECTING DEFECT 1 (vertices=41, convex hull=55, v0=831) After retessellation of defect 1 (v0=831), euler #=-85 (115287,342036,226664) : difference with theory (-87) = -2 CORRECTING DEFECT 2 (vertices=539, convex hull=332, v0=873) After retessellation of defect 2 (v0=873), euler #=-85 (115526,342920,227309) : difference with theory (-86) = -1 CORRECTING DEFECT 3 (vertices=1700, convex hull=697, v0=2491) XL defect detected... After retessellation of defect 3 (v0=2491), euler #=-84 (115683,343771,228004) : difference with theory (-85) = -1 CORRECTING DEFECT 4 (vertices=25, convex hull=14, v0=3750) After retessellation of defect 4 (v0=3750), euler #=-83 (115684,343778,228011) : difference with theory (-84) = -1 CORRECTING DEFECT 5 (vertices=54, convex hull=86, v0=4281) After retessellation of defect 5 (v0=4281), euler #=-82 (115710,343890,228098) : difference with theory (-83) = -1 CORRECTING DEFECT 6 (vertices=60, convex hull=96, v0=6268) After retessellation of defect 6 (v0=6268), euler #=-81 (115744,344029,228204) : difference with theory (-82) = -1 CORRECTING DEFECT 7 (vertices=25, convex hull=59, v0=7298) After retessellation of defect 7 (v0=7298), euler #=-80 (115753,344078,228245) : difference with theory (-81) = -1 CORRECTING DEFECT 8 (vertices=31, convex hull=29, v0=7721) After retessellation of defect 8 (v0=7721), euler #=-79 (115757,344101,228265) : difference with theory (-80) = -1 CORRECTING DEFECT 9 (vertices=55, convex hull=86, v0=8673) After retessellation of defect 9 (v0=8673), euler #=-78 (115774,344186,228334) : difference with theory (-79) = -1 CORRECTING DEFECT 10 (vertices=21, convex hull=53, v0=11696) After retessellation of defect 10 (v0=11696), euler #=-77 (115783,344230,228370) : difference with theory (-78) = -1 CORRECTING DEFECT 11 (vertices=22, convex hull=83, v0=17684) After retessellation of defect 11 (v0=17684), euler #=-76 (115795,344297,228426) : difference with theory (-77) = -1 CORRECTING DEFECT 12 (vertices=73, convex hull=37, v0=18525) After retessellation of defect 12 (v0=18525), euler #=-75 (115803,344336,228458) : difference with theory (-76) = -1 CORRECTING DEFECT 13 (vertices=17, convex hull=31, v0=19499) After retessellation of defect 13 (v0=19499), euler #=-74 (115804,344351,228473) : difference with theory (-75) = -1 CORRECTING DEFECT 14 (vertices=55, convex hull=38, v0=19845) After retessellation of defect 14 (v0=19845), euler #=-73 (115810,344383,228500) : difference with theory (-74) = -1 CORRECTING DEFECT 15 (vertices=25, convex hull=21, v0=20777) After retessellation of defect 15 (v0=20777), euler #=-72 (115812,344395,228511) : difference with theory (-73) = -1 CORRECTING DEFECT 16 (vertices=27, convex hull=67, v0=21250) After retessellation of defect 16 (v0=21250), euler #=-71 (115826,344463,228566) : difference with theory (-72) = -1 CORRECTING DEFECT 17 (vertices=17, convex hull=15, v0=22636) After retessellation of defect 17 (v0=22636), euler #=-70 (115828,344471,228573) : difference with theory (-71) = -1 CORRECTING DEFECT 18 (vertices=109, convex hull=120, v0=26256) After retessellation of defect 18 (v0=26256), euler #=-69 (115851,344592,228672) : difference with theory (-70) = -1 CORRECTING DEFECT 19 (vertices=29, convex hull=25, v0=26829) After retessellation of defect 19 (v0=26829), euler #=-68 (115856,344613,228689) : difference with theory (-69) = -1 CORRECTING DEFECT 20 (vertices=31, convex hull=61, v0=28622) After retessellation of defect 20 (v0=28622), euler #=-67 (115873,344685,228745) : difference with theory (-68) = -1 CORRECTING DEFECT 21 (vertices=5416, convex hull=1365, v0=29184) XL defect detected... After retessellation of defect 21 (v0=29184), euler #=-67 (116381,346982,230534) : difference with theory (-67) = 0 CORRECTING DEFECT 22 (vertices=138, convex hull=116, v0=30242) After retessellation of defect 22 (v0=30242), euler #=-66 (116438,347205,230701) : difference with theory (-66) = 0 CORRECTING DEFECT 23 (vertices=74, convex hull=110, v0=31802) After retessellation of defect 23 (v0=31802), euler #=-65 (116482,347390,230843) : difference with theory (-65) = 0 CORRECTING DEFECT 24 (vertices=32, convex hull=63, v0=32029) After retessellation of defect 24 (v0=32029), euler #=-64 (116496,347455,230895) : difference with theory (-64) = 0 CORRECTING DEFECT 25 (vertices=20, convex hull=38, v0=32763) After retessellation of defect 25 (v0=32763), euler #=-63 (116509,347507,230935) : difference with theory (-63) = 0 CORRECTING DEFECT 26 (vertices=28, convex hull=13, v0=34099) After retessellation of defect 26 (v0=34099), euler #=-62 (116509,347508,230937) : difference with theory (-62) = 0 CORRECTING DEFECT 27 (vertices=93, convex hull=145, v0=35610) After retessellation of defect 27 (v0=35610), euler #=-61 (116567,347750,231122) : difference with theory (-61) = 0 CORRECTING DEFECT 28 (vertices=129, convex hull=115, v0=38205) After retessellation of defect 28 (v0=38205), euler #=-60 (116606,347920,231254) : difference with theory (-60) = 0 CORRECTING DEFECT 29 (vertices=29, convex hull=49, v0=42213) After retessellation of defect 29 (v0=42213), euler #=-59 (116621,347983,231303) : difference with theory (-59) = 0 CORRECTING DEFECT 30 (vertices=523, convex hull=264, v0=44199) After retessellation of defect 30 (v0=44199), euler #=-58 (116841,348797,231898) : difference with theory (-58) = 0 CORRECTING DEFECT 31 (vertices=163, convex hull=142, v0=44279) After retessellation of defect 31 (v0=44279), euler #=-56 (116894,349020,232070) : difference with theory (-57) = -1 CORRECTING DEFECT 32 (vertices=216, convex hull=96, v0=44518) After retessellation of defect 32 (v0=44518), euler #=-55 (116905,349103,232143) : difference with theory (-56) = -1 CORRECTING DEFECT 33 (vertices=131, convex hull=142, v0=45741) After retessellation of defect 33 (v0=45741), euler #=-54 (116933,349251,232264) : difference with theory (-55) = -1 CORRECTING DEFECT 34 (vertices=87, convex hull=120, v0=49422) After retessellation of defect 34 (v0=49422), euler #=-54 (116974,349434,232406) : difference with theory (-54) = 0 CORRECTING DEFECT 35 (vertices=30, convex hull=30, v0=51709) After retessellation of defect 35 (v0=51709), euler #=-53 (116977,349452,232422) : difference with theory (-53) = 0 CORRECTING DEFECT 36 (vertices=102, convex hull=97, v0=51739) After retessellation of defect 36 (v0=51739), euler #=-52 (117010,349592,232530) : difference with theory (-52) = 0 CORRECTING DEFECT 37 (vertices=25, convex hull=40, v0=51956) After retessellation of defect 37 (v0=51956), euler #=-51 (117019,349634,232564) : difference with theory (-51) = 0 CORRECTING DEFECT 38 (vertices=20, convex hull=28, v0=53151) After retessellation of defect 38 (v0=53151), euler #=-50 (117024,349657,232583) : difference with theory (-50) = 0 CORRECTING DEFECT 39 (vertices=11, convex hull=19, v0=56219) After retessellation of defect 39 (v0=56219), euler #=-49 (117026,349670,232595) : difference with theory (-49) = 0 CORRECTING DEFECT 40 (vertices=275, convex hull=58, v0=56487) After retessellation of defect 40 (v0=56487), euler #=-48 (117035,349717,232634) : difference with theory (-48) = 0 CORRECTING DEFECT 41 (vertices=83, convex hull=42, v0=57687) After retessellation of defect 41 (v0=57687), euler #=-47 (117047,349770,232676) : difference with theory (-47) = 0 CORRECTING DEFECT 42 (vertices=97, convex hull=29, v0=60763) After retessellation of defect 42 (v0=60763), euler #=-46 (117052,349794,232696) : difference with theory (-46) = 0 CORRECTING DEFECT 43 (vertices=202, convex hull=196, v0=60841) After retessellation of defect 43 (v0=60841), euler #=-45 (117069,349945,232831) : difference with theory (-45) = 0 CORRECTING DEFECT 44 (vertices=83, convex hull=100, v0=62014) After retessellation of defect 44 (v0=62014), euler #=-44 (117092,350056,232920) : difference with theory (-44) = 0 CORRECTING DEFECT 45 (vertices=26, convex hull=45, v0=62620) After retessellation of defect 45 (v0=62620), euler #=-43 (117103,350106,232960) : difference with theory (-43) = 0 CORRECTING DEFECT 46 (vertices=15, convex hull=18, v0=63108) After retessellation of defect 46 (v0=63108), euler #=-42 (117104,350111,232965) : difference with theory (-42) = 0 CORRECTING DEFECT 47 (vertices=29, convex hull=63, v0=66497) After retessellation of defect 47 (v0=66497), euler #=-41 (117118,350179,233020) : difference with theory (-41) = 0 CORRECTING DEFECT 48 (vertices=365, convex hull=319, v0=66644) After retessellation of defect 48 (v0=66644), euler #=-38 (117234,350696,233424) : difference with theory (-40) = -2 CORRECTING DEFECT 49 (vertices=6, convex hull=20, v0=71142) After retessellation of defect 49 (v0=71142), euler #=-37 (117237,350711,233437) : difference with theory (-39) = -2 CORRECTING DEFECT 50 (vertices=73, convex hull=82, v0=72141) After retessellation of defect 50 (v0=72141), euler #=-36 (117279,350867,233552) : difference with theory (-38) = -2 CORRECTING DEFECT 51 (vertices=24, convex hull=37, v0=77303) After retessellation of defect 51 (v0=77303), euler #=-35 (117285,350896,233576) : difference with theory (-37) = -2 CORRECTING DEFECT 52 (vertices=146, convex hull=112, v0=77468) After retessellation of defect 52 (v0=77468), euler #=-34 (117351,351144,233759) : difference with theory (-36) = -2 CORRECTING DEFECT 53 (vertices=5, convex hull=12, v0=77477) After retessellation of defect 53 (v0=77477), euler #=-33 (117352,351150,233765) : difference with theory (-35) = -2 CORRECTING DEFECT 54 (vertices=190, convex hull=110, v0=77507) After retessellation of defect 54 (v0=77507), euler #=-32 (117404,351356,233920) : difference with theory (-34) = -2 CORRECTING DEFECT 55 (vertices=339, convex hull=147, v0=78082) After retessellation of defect 55 (v0=78082), euler #=-31 (117469,351618,234118) : difference with theory (-33) = -2 CORRECTING DEFECT 56 (vertices=18, convex hull=39, v0=78268) After retessellation of defect 56 (v0=78268), euler #=-30 (117478,351657,234149) : difference with theory (-32) = -2 CORRECTING DEFECT 57 (vertices=9, convex hull=27, v0=79943) After retessellation of defect 57 (v0=79943), euler #=-29 (117480,351672,234163) : difference with theory (-31) = -2 CORRECTING DEFECT 58 (vertices=118, convex hull=59, v0=80318) After retessellation of defect 58 (v0=80318), euler #=-28 (117489,351723,234206) : difference with theory (-30) = -2 CORRECTING DEFECT 59 (vertices=26, convex hull=43, v0=81182) After retessellation of defect 59 (v0=81182), euler #=-28 (117500,351776,234248) : difference with theory (-29) = -1 CORRECTING DEFECT 60 (vertices=24, convex hull=44, v0=82163) After retessellation of defect 60 (v0=82163), euler #=-27 (117511,351826,234288) : difference with theory (-28) = -1 CORRECTING DEFECT 61 (vertices=12, convex hull=22, v0=82553) After retessellation of defect 61 (v0=82553), euler #=-26 (117513,351837,234298) : difference with theory (-27) = -1 CORRECTING DEFECT 62 (vertices=34, convex hull=21, v0=83472) After retessellation of defect 62 (v0=83472), euler #=-25 (117518,351857,234314) : difference with theory (-26) = -1 CORRECTING DEFECT 63 (vertices=59, convex hull=40, v0=83672) After retessellation of defect 63 (v0=83672), euler #=-24 (117524,351890,234342) : difference with theory (-25) = -1 CORRECTING DEFECT 64 (vertices=17, convex hull=20, v0=83757) After retessellation of defect 64 (v0=83757), euler #=-23 (117524,351893,234346) : difference with theory (-24) = -1 CORRECTING DEFECT 65 (vertices=67, convex hull=60, v0=86297) After retessellation of defect 65 (v0=86297), euler #=-21 (117542,351971,234408) : difference with theory (-23) = -2 CORRECTING DEFECT 66 (vertices=1437, convex hull=417, v0=87179) L defect detected... After retessellation of defect 66 (v0=87179), euler #=-22 (117653,352536,234861) : difference with theory (-22) = 0 CORRECTING DEFECT 67 (vertices=22, convex hull=21, v0=87889) After retessellation of defect 67 (v0=87889), euler #=-21 (117657,352553,234875) : difference with theory (-21) = 0 CORRECTING DEFECT 68 (vertices=61, convex hull=59, v0=90974) After retessellation of defect 68 (v0=90974), euler #=-20 (117676,352631,234935) : difference with theory (-20) = 0 CORRECTING DEFECT 69 (vertices=33, convex hull=52, v0=91056) After retessellation of defect 69 (v0=91056), euler #=-19 (117684,352675,234972) : difference with theory (-19) = 0 CORRECTING DEFECT 70 (vertices=46, convex hull=73, v0=93547) After retessellation of defect 70 (v0=93547), euler #=-18 (117710,352784,235056) : difference with theory (-18) = 0 CORRECTING DEFECT 71 (vertices=6, convex hull=28, v0=94718) After retessellation of defect 71 (v0=94718), euler #=-17 (117713,352802,235072) : difference with theory (-17) = 0 CORRECTING DEFECT 72 (vertices=36, convex hull=60, v0=97758) After retessellation of defect 72 (v0=97758), euler #=-16 (117724,352860,235120) : difference with theory (-16) = 0 CORRECTING DEFECT 73 (vertices=36, convex hull=29, v0=97872) After retessellation of defect 73 (v0=97872), euler #=-15 (117736,352913,235162) : difference with theory (-15) = 0 CORRECTING DEFECT 74 (vertices=6, convex hull=25, v0=98784) After retessellation of defect 74 (v0=98784), euler #=-14 (117736,352921,235171) : difference with theory (-14) = 0 CORRECTING DEFECT 75 (vertices=73, convex hull=26, v0=100176) After retessellation of defect 75 (v0=100176), euler #=-13 (117741,352943,235189) : difference with theory (-13) = 0 CORRECTING DEFECT 76 (vertices=44, convex hull=34, v0=101265) After retessellation of defect 76 (v0=101265), euler #=-12 (117745,352967,235210) : difference with theory (-12) = 0 CORRECTING DEFECT 77 (vertices=42, convex hull=43, v0=101495) After retessellation of defect 77 (v0=101495), euler #=-11 (117755,353013,235247) : difference with theory (-11) = 0 CORRECTING DEFECT 78 (vertices=31, convex hull=62, v0=102431) After retessellation of defect 78 (v0=102431), euler #=-10 (117772,353089,235307) : difference with theory (-10) = 0 CORRECTING DEFECT 79 (vertices=21, convex hull=32, v0=104116) After retessellation of defect 79 (v0=104116), euler #=-9 (117777,353113,235327) : difference with theory (-9) = 0 CORRECTING DEFECT 80 (vertices=23, convex hull=26, v0=104680) After retessellation of defect 80 (v0=104680), euler #=-8 (117780,353130,235342) : difference with theory (-8) = 0 CORRECTING DEFECT 81 (vertices=22, convex hull=33, v0=106547) After retessellation of defect 81 (v0=106547), euler #=-7 (117782,353146,235357) : difference with theory (-7) = 0 CORRECTING DEFECT 82 (vertices=11, convex hull=24, v0=107269) After retessellation of defect 82 (v0=107269), euler #=-6 (117786,353165,235373) : difference with theory (-6) = 0 CORRECTING DEFECT 83 (vertices=17, convex hull=49, v0=111058) After retessellation of defect 83 (v0=111058), euler #=-5 (117796,353214,235413) : difference with theory (-5) = 0 CORRECTING DEFECT 84 (vertices=47, convex hull=85, v0=111219) After retessellation of defect 84 (v0=111219), euler #=-4 (117814,353304,235486) : difference with theory (-4) = 0 CORRECTING DEFECT 85 (vertices=10, convex hull=13, v0=113347) After retessellation of defect 85 (v0=113347), euler #=-3 (117814,353306,235489) : difference with theory (-3) = 0 CORRECTING DEFECT 86 (vertices=24, convex hull=67, v0=121719) After retessellation of defect 86 (v0=121719), euler #=-2 (117823,353358,235533) : difference with theory (-2) = 0 CORRECTING DEFECT 87 (vertices=36, convex hull=82, v0=125079) After retessellation of defect 87 (v0=125079), euler #=-1 (117846,353459,235612) : difference with theory (-1) = 0 CORRECTING DEFECT 88 (vertices=26, convex hull=49, v0=127955) After retessellation of defect 88 (v0=127955), euler #=0 (117855,353503,235648) : difference with theory (0) = 0 CORRECTING DEFECT 89 (vertices=26, convex hull=71, v0=128989) After retessellation of defect 89 (v0=128989), euler #=1 (117867,353566,235700) : difference with theory (1) = 0 CORRECTING DEFECT 90 (vertices=40, convex hull=71, v0=129620) After retessellation of defect 90 (v0=129620), euler #=2 (117888,353658,235772) : difference with theory (2) = 0 computing original vertex metric properties... storing new metric properties... computing tessellation statistics... vertex spacing 0.90 +- 0.38 (0.03-->29.71) (max @ vno 39155 --> 51354) face area 0.00 +- 0.00 (0.00-->0.00) performing soap bubble on retessellated vertices for 0 iterations... vertex spacing 0.90 +- 0.38 (0.03-->29.71) (max @ vno 39155 --> 51354) face area 0.00 +- 0.00 (0.00-->0.00) tessellation finished, orienting corrected surface... 265 mutations (33.8%), 519 crossovers (66.2%), 2862 vertices were eliminated building final representation... 14830 vertices and 0 faces have been removed from triangulation after topology correction, eno=2 (nv=117888, nf=235772, ne=353658, g=0) writing corrected surface to /output/january_2021/subject1/surf/lh.orig... 0.000 % of the vertices (0 vertices) exhibit an orientation change topology fixing took 265.5 minutes 0 defective edges removing intersecting faces 000: 1574 intersecting 001: 230 intersecting 002: 147 intersecting 003: 76 intersecting 004: 72 intersecting expanding nbhd size to 2 005: 72 intersecting 006: 70 intersecting 007: 28 intersecting 008: 24 intersecting 009: 17 intersecting 010: 16 intersecting 011: 12 intersecting 012: 8 intersecting 013: 5 intersecting 014: 3 intersecting expanding nbhd size to 3 015: 3 intersecting mris_fix_topology utimesec 14749.845868 mris_fix_topology stimesec 50.599848 mris_fix_topology ru_maxrss 659416 mris_fix_topology ru_ixrss 0 mris_fix_topology ru_idrss 0 mris_fix_topology ru_isrss 0 mris_fix_topology ru_minflt 22093237 mris_fix_topology ru_majflt 0 mris_fix_topology ru_nswap 0 mris_fix_topology ru_inblock 0 mris_fix_topology ru_oublock 12224 mris_fix_topology ru_msgsnd 0 mris_fix_topology ru_msgrcv 0 mris_fix_topology ru_nsignals 0 mris_fix_topology ru_nvcsw 1268 mris_fix_topology ru_nivcsw 211687 FSRUNTIME@ mris_fix_topology lh 4.4253 hours 1 threads mris_fix_topology -rusage /output/january_2021/subject1/touch/rusage.mris_fix_topology.rh.dat -mgz -sphere qsphere.nofix -ga -seed 1234 subject1 rh reading spherical homeomorphism from 'qsphere.nofix' using genetic algorithm with optimized parameters setting seed for random number genererator to 1234 ************************************************************* Topology Correction Parameters retessellation mode: genetic search number of patches/generation : 10 number of generations : 10 surface mri loglikelihood coefficient : 1.0 volume mri loglikelihood coefficient : 10.0 normal dot loglikelihood coefficient : 1.0 quadratic curvature loglikelihood coefficient : 1.0 volume resolution : 2 eliminate vertices during search : 1 initial patch selection : 1 select all defect vertices : 0 ordering dependant retessellation: 0 use precomputed edge table : 0 smooth retessellated patch : 2 match retessellated patch : 1 verbose mode : 0 ************************************************************* INFO: assuming .mgz format $Id: mris_fix_topology.c,v 1.50.2.1 2016/10/27 22:25:58 zkaufman Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ before topology correction, eno=-316 (nv=136992, nf=274616, ne=411924, g=159) using quasi-homeomorphic spherical map to tessellate cortical surface... Correction of the Topology Finding true center and radius of Spherical Surface...done Surface centered at (0,0,0) with radius 100.0 in 8 iterations marking ambiguous vertices... 35366 ambiguous faces found in tessellation segmenting defects... 85 defects found, arbitrating ambiguous regions... analyzing neighboring defects... -merging segment 11 into 2 -merging segment 19 into 2 -merging segment 26 into 2 -merging segment 28 into 27 -merging segment 36 into 31 -merging segment 51 into 31 -merging segment 54 into 31 -merging segment 56 into 31 -merging segment 61 into 31 -merging segment 63 into 31 -merging segment 67 into 31 -merging segment 71 into 31 -merging segment 72 into 31 -merging segment 55 into 31 -merging segment 60 into 31 -merging segment 69 into 31 -merging segment 31 into 62 -merging segment 74 into 73 -merging segment 78 into 77 66 defects to be corrected 0 vertices coincident reading input surface /output/january_2021/subject1/surf/rh.qsphere.nofix... reading brain volume from brain... reading wm segmentation from wm... Computing Initial Surface Statistics -face loglikelihood: -8.8881 (-4.4441) -vertex loglikelihood: -6.1484 (-3.0742) -normal dot loglikelihood: -3.5181 (-3.5181) -quad curv loglikelihood: -6.2271 (-3.1135) Total Loglikelihood : -24.7817 CORRECTING DEFECT 0 (vertices=30, convex hull=84, v0=216) After retessellation of defect 0 (v0=216), euler #=-67 (117275,347501,230159) : difference with theory (-63) = 4 CORRECTING DEFECT 1 (vertices=36, convex hull=62, v0=2239) After retessellation of defect 1 (v0=2239), euler #=-66 (117291,347575,230218) : difference with theory (-62) = 4 CORRECTING DEFECT 2 (vertices=5837, convex hull=2048, v0=7411) XL defect detected... After retessellation of defect 2 (v0=7411), euler #=-68 (118724,353012,234220) : difference with theory (-61) = 7 CORRECTING DEFECT 3 (vertices=161, convex hull=175, v0=7883) After retessellation of defect 3 (v0=7883), euler #=-67 (118755,353188,234366) : difference with theory (-60) = 7 CORRECTING DEFECT 4 (vertices=119, convex hull=75, v0=9317) After retessellation of defect 4 (v0=9317), euler #=-66 (118779,353292,234447) : difference with theory (-59) = 7 CORRECTING DEFECT 5 (vertices=72, convex hull=74, v0=11025) After retessellation of defect 5 (v0=11025), euler #=-65 (118809,353413,234539) : difference with theory (-58) = 7 CORRECTING DEFECT 6 (vertices=43, convex hull=54, v0=11724) After retessellation of defect 6 (v0=11724), euler #=-64 (118816,353462,234582) : difference with theory (-57) = 7 CORRECTING DEFECT 7 (vertices=5, convex hull=21, v0=12825) After retessellation of defect 7 (v0=12825), euler #=-63 (118816,353468,234589) : difference with theory (-56) = 7 CORRECTING DEFECT 8 (vertices=49, convex hull=57, v0=15238) After retessellation of defect 8 (v0=15238), euler #=-62 (118828,353528,234638) : difference with theory (-55) = 7 CORRECTING DEFECT 9 (vertices=6, convex hull=20, v0=17738) After retessellation of defect 9 (v0=17738), euler #=-61 (118830,353540,234649) : difference with theory (-54) = 7 CORRECTING DEFECT 10 (vertices=24, convex hull=25, v0=19167) After retessellation of defect 10 (v0=19167), euler #=-60 (118834,353561,234667) : difference with theory (-53) = 7 CORRECTING DEFECT 11 (vertices=18, convex hull=33, v0=24020) After retessellation of defect 11 (v0=24020), euler #=-59 (118836,353576,234681) : difference with theory (-52) = 7 CORRECTING DEFECT 12 (vertices=93, convex hull=73, v0=26423) After retessellation of defect 12 (v0=26423), euler #=-58 (118849,353645,234738) : difference with theory (-51) = 7 CORRECTING DEFECT 13 (vertices=202, convex hull=169, v0=29174) After retessellation of defect 13 (v0=29174), euler #=-57 (118950,354030,235023) : difference with theory (-50) = 7 CORRECTING DEFECT 14 (vertices=35, convex hull=77, v0=31761) After retessellation of defect 14 (v0=31761), euler #=-56 (118971,354122,235095) : difference with theory (-49) = 7 CORRECTING DEFECT 15 (vertices=6, convex hull=24, v0=32881) After retessellation of defect 15 (v0=32881), euler #=-55 (118973,354135,235107) : difference with theory (-48) = 7 CORRECTING DEFECT 16 (vertices=42, convex hull=52, v0=34355) After retessellation of defect 16 (v0=34355), euler #=-54 (118989,354205,235162) : difference with theory (-47) = 7 CORRECTING DEFECT 17 (vertices=180, convex hull=31, v0=35070) After retessellation of defect 17 (v0=35070), euler #=-53 (118997,354241,235191) : difference with theory (-46) = 7 CORRECTING DEFECT 18 (vertices=35, convex hull=64, v0=37214) After retessellation of defect 18 (v0=37214), euler #=-52 (119012,354306,235242) : difference with theory (-45) = 7 CORRECTING DEFECT 19 (vertices=131, convex hull=126, v0=38835) After retessellation of defect 19 (v0=38835), euler #=-51 (119045,354458,235362) : difference with theory (-44) = 7 CORRECTING DEFECT 20 (vertices=260, convex hull=200, v0=38873) After retessellation of defect 20 (v0=38873), euler #=-50 (119144,354865,235671) : difference with theory (-43) = 7 CORRECTING DEFECT 21 (vertices=50, convex hull=84, v0=46242) After retessellation of defect 21 (v0=46242), euler #=-49 (119164,354963,235750) : difference with theory (-42) = 7 CORRECTING DEFECT 22 (vertices=8, convex hull=15, v0=47905) After retessellation of defect 22 (v0=47905), euler #=-48 (119165,354970,235757) : difference with theory (-41) = 7 CORRECTING DEFECT 23 (vertices=14, convex hull=30, v0=48049) After retessellation of defect 23 (v0=48049), euler #=-47 (119167,354986,235772) : difference with theory (-40) = 7 CORRECTING DEFECT 24 (vertices=73, convex hull=85, v0=49970) After retessellation of defect 24 (v0=49970), euler #=-45 (119188,355088,235855) : difference with theory (-39) = 6 CORRECTING DEFECT 25 (vertices=30, convex hull=57, v0=51625) After retessellation of defect 25 (v0=51625), euler #=-44 (119206,355163,235913) : difference with theory (-38) = 6 CORRECTING DEFECT 26 (vertices=46, convex hull=70, v0=51764) After retessellation of defect 26 (v0=51764), euler #=-43 (119223,355243,235977) : difference with theory (-37) = 6 CORRECTING DEFECT 27 (vertices=35, convex hull=25, v0=52756) After retessellation of defect 27 (v0=52756), euler #=-42 (119224,355252,235986) : difference with theory (-36) = 6 CORRECTING DEFECT 28 (vertices=5, convex hull=21, v0=53999) After retessellation of defect 28 (v0=53999), euler #=-41 (119224,355258,235993) : difference with theory (-35) = 6 CORRECTING DEFECT 29 (vertices=39, convex hull=26, v0=54861) After retessellation of defect 29 (v0=54861), euler #=-40 (119230,355284,236014) : difference with theory (-34) = 6 CORRECTING DEFECT 30 (vertices=44, convex hull=53, v0=54921) After retessellation of defect 30 (v0=54921), euler #=-39 (119240,355339,236060) : difference with theory (-33) = 6 CORRECTING DEFECT 31 (vertices=11, convex hull=26, v0=58203) After retessellation of defect 31 (v0=58203), euler #=-38 (119242,355352,236072) : difference with theory (-32) = 6 CORRECTING DEFECT 32 (vertices=32, convex hull=79, v0=59048) After retessellation of defect 32 (v0=59048), euler #=-37 (119264,355445,236144) : difference with theory (-31) = 6 CORRECTING DEFECT 33 (vertices=42, convex hull=35, v0=59480) After retessellation of defect 33 (v0=59480), euler #=-36 (119270,355472,236166) : difference with theory (-30) = 6 CORRECTING DEFECT 34 (vertices=5, convex hull=26, v0=60404) After retessellation of defect 34 (v0=60404), euler #=-35 (119271,355482,236176) : difference with theory (-29) = 6 CORRECTING DEFECT 35 (vertices=13, convex hull=25, v0=63608) After retessellation of defect 35 (v0=63608), euler #=-34 (119273,355495,236188) : difference with theory (-28) = 6 CORRECTING DEFECT 36 (vertices=11, convex hull=24, v0=63698) After retessellation of defect 36 (v0=63698), euler #=-33 (119276,355511,236202) : difference with theory (-27) = 6 CORRECTING DEFECT 37 (vertices=5, convex hull=12, v0=64947) After retessellation of defect 37 (v0=64947), euler #=-32 (119277,355518,236209) : difference with theory (-26) = 6 CORRECTING DEFECT 38 (vertices=18, convex hull=22, v0=67061) After retessellation of defect 38 (v0=67061), euler #=-31 (119279,355527,236217) : difference with theory (-25) = 6 CORRECTING DEFECT 39 (vertices=12, convex hull=24, v0=68415) After retessellation of defect 39 (v0=68415), euler #=-30 (119282,355545,236233) : difference with theory (-24) = 6 CORRECTING DEFECT 40 (vertices=29, convex hull=54, v0=69167) After retessellation of defect 40 (v0=69167), euler #=-29 (119291,355594,236274) : difference with theory (-23) = 6 CORRECTING DEFECT 41 (vertices=38, convex hull=52, v0=69251) After retessellation of defect 41 (v0=69251), euler #=-28 (119300,355643,236315) : difference with theory (-22) = 6 CORRECTING DEFECT 42 (vertices=972, convex hull=512, v0=72211) L defect detected... After retessellation of defect 42 (v0=72211), euler #=-27 (119346,356049,236676) : difference with theory (-21) = 6 CORRECTING DEFECT 43 (vertices=6, convex hull=14, v0=74128) After retessellation of defect 43 (v0=74128), euler #=-26 (119347,356055,236682) : difference with theory (-20) = 6 CORRECTING DEFECT 44 (vertices=52, convex hull=26, v0=75320) After retessellation of defect 44 (v0=75320), euler #=-25 (119351,356075,236699) : difference with theory (-19) = 6 CORRECTING DEFECT 45 (vertices=24, convex hull=72, v0=79524) After retessellation of defect 45 (v0=79524), euler #=-24 (119363,356138,236751) : difference with theory (-18) = 6 CORRECTING DEFECT 46 (vertices=639, convex hull=212, v0=79860) After retessellation of defect 46 (v0=79860), euler #=-23 (119411,356387,236953) : difference with theory (-17) = 6 CORRECTING DEFECT 47 (vertices=14, convex hull=27, v0=85366) After retessellation of defect 47 (v0=85366), euler #=-22 (119414,356401,236965) : difference with theory (-16) = 6 CORRECTING DEFECT 48 (vertices=8, convex hull=18, v0=86420) After retessellation of defect 48 (v0=86420), euler #=-21 (119416,356412,236975) : difference with theory (-15) = 6 CORRECTING DEFECT 49 (vertices=100, convex hull=67, v0=86494) After retessellation of defect 49 (v0=86494), euler #=-20 (119458,356566,237088) : difference with theory (-14) = 6 CORRECTING DEFECT 50 (vertices=9173, convex hull=2359, v0=92268) XL defect detected... After retessellation of defect 50 (v0=92268), euler #=-15 (120307,360514,240192) : difference with theory (-13) = 2 CORRECTING DEFECT 51 (vertices=26, convex hull=15, v0=93310) After retessellation of defect 51 (v0=93310), euler #=-14 (120310,360527,240203) : difference with theory (-12) = 2 CORRECTING DEFECT 52 (vertices=15, convex hull=19, v0=95795) After retessellation of defect 52 (v0=95795), euler #=-13 (120313,360542,240216) : difference with theory (-11) = 2 CORRECTING DEFECT 53 (vertices=46, convex hull=64, v0=96701) After retessellation of defect 53 (v0=96701), euler #=-12 (120339,360650,240299) : difference with theory (-10) = 2 CORRECTING DEFECT 54 (vertices=9, convex hull=32, v0=101882) After retessellation of defect 54 (v0=101882), euler #=-11 (120342,360666,240313) : difference with theory (-9) = 2 CORRECTING DEFECT 55 (vertices=34, convex hull=59, v0=102635) After retessellation of defect 55 (v0=102635), euler #=-10 (120353,360722,240359) : difference with theory (-8) = 2 CORRECTING DEFECT 56 (vertices=148, convex hull=134, v0=103815) After retessellation of defect 56 (v0=103815), euler #=-8 (120370,360832,240454) : difference with theory (-7) = 1 CORRECTING DEFECT 57 (vertices=34, convex hull=67, v0=108036) After retessellation of defect 57 (v0=108036), euler #=-7 (120385,360902,240510) : difference with theory (-6) = 1 CORRECTING DEFECT 58 (vertices=50, convex hull=75, v0=108511) After retessellation of defect 58 (v0=108511), euler #=-6 (120410,361008,240592) : difference with theory (-5) = 1 CORRECTING DEFECT 59 (vertices=51, convex hull=94, v0=109409) After retessellation of defect 59 (v0=109409), euler #=-4 (120441,361150,240705) : difference with theory (-4) = 0 CORRECTING DEFECT 60 (vertices=38, convex hull=61, v0=113304) After retessellation of defect 60 (v0=113304), euler #=-3 (120462,361236,240771) : difference with theory (-3) = 0 CORRECTING DEFECT 61 (vertices=25, convex hull=57, v0=116171) After retessellation of defect 61 (v0=116171), euler #=-2 (120479,361308,240827) : difference with theory (-2) = 0 CORRECTING DEFECT 62 (vertices=43, convex hull=66, v0=119213) After retessellation of defect 62 (v0=119213), euler #=-1 (120500,361399,240898) : difference with theory (-1) = 0 CORRECTING DEFECT 63 (vertices=32, convex hull=57, v0=119817) After retessellation of defect 63 (v0=119817), euler #=0 (120509,361448,240939) : difference with theory (0) = 0 CORRECTING DEFECT 64 (vertices=35, convex hull=78, v0=130509) After retessellation of defect 64 (v0=130509), euler #=1 (120528,361534,241007) : difference with theory (1) = 0 CORRECTING DEFECT 65 (vertices=199, convex hull=102, v0=131940) After retessellation of defect 65 (v0=131940), euler #=2 (120537,361605,241070) : difference with theory (2) = 0 computing original vertex metric properties... storing new metric properties... computing tessellation statistics... vertex spacing 0.90 +- 0.36 (0.05-->16.57) (max @ vno 62109 --> 74067) face area 0.00 +- 0.00 (0.00-->0.00) performing soap bubble on retessellated vertices for 0 iterations... vertex spacing 0.90 +- 0.36 (0.05-->16.57) (max @ vno 62109 --> 74067) face area 0.00 +- 0.00 (0.00-->0.00) tessellation finished, orienting corrected surface... 258 mutations (37.4%), 432 crossovers (62.6%), 2860 vertices were eliminated building final representation... 16455 vertices and 0 faces have been removed from triangulation after topology correction, eno=2 (nv=120537, nf=241070, ne=361605, g=0) writing corrected surface to /output/january_2021/subject1/surf/rh.orig... 0.000 % of the vertices (0 vertices) exhibit an orientation change topology fixing took 766.0 minutes 0 defective edges removing intersecting faces 000: 2023 intersecting 001: 194 intersecting 002: 95 intersecting 003: 63 intersecting 004: 40 intersecting 005: 36 intersecting 006: 28 intersecting expanding nbhd size to 2 007: 32 intersecting 008: 28 intersecting expanding nbhd size to 3 009: 31 intersecting 010: 19 intersecting 011: 17 intersecting 012: 12 intersecting expanding nbhd size to 4 013: 12 intersecting mris_fix_topology utimesec 45170.889364 mris_fix_topology stimesec 121.962786 mris_fix_topology ru_maxrss 1122688 mris_fix_topology ru_ixrss 0 mris_fix_topology ru_idrss 0 mris_fix_topology ru_isrss 0 mris_fix_topology ru_minflt 67517014 mris_fix_topology ru_majflt 0 mris_fix_topology ru_nswap 0 mris_fix_topology ru_inblock 0 mris_fix_topology ru_oublock 12296 mris_fix_topology ru_msgsnd 0 mris_fix_topology ru_msgrcv 0 mris_fix_topology ru_nsignals 0 mris_fix_topology ru_nvcsw 348 mris_fix_topology ru_nivcsw 214394 FSRUNTIME@ mris_fix_topology rh 12.7666 hours 1 threads PIDs (78692 78695) completed and logs appended. mris_euler_number ../surf/lh.orig euler # = v-e+f = 2g-2: 117888 - 353658 + 235772 = 2 --> 0 holes F =2V-4: 235772 = 235776-4 (0) 2E=3F: 707316 = 707316 (0) total defect index = 0 mris_euler_number ../surf/rh.orig euler # = v-e+f = 2g-2: 120537 - 361605 + 241070 = 2 --> 0 holes F =2V-4: 241070 = 241074-4 (0) 2E=3F: 723210 = 723210 (0) total defect index = 0 /output/january_2021/subject1/scripts mris_remove_intersection ../surf/lh.orig ../surf/lh.orig intersection removal took 0.00 hours removing intersecting faces 000: 561 intersecting 001: 178 intersecting 002: 119 intersecting 003: 87 intersecting 004: 85 intersecting 005: 64 intersecting expanding nbhd size to 2 006: 69 intersecting 007: 27 intersecting 008: 25 intersecting 009: 23 intersecting 010: 15 intersecting 011: 12 intersecting 012: 8 intersecting 013: 7 intersecting 014: 4 intersecting 015: 2 intersecting writing corrected surface to ../surf/lh.orig rm ../surf/lh.inflated /output/january_2021/subject1/scripts mris_remove_intersection ../surf/rh.orig ../surf/rh.orig intersection removal took 0.00 hours removing intersecting faces 000: 847 intersecting 001: 173 intersecting 002: 86 intersecting 003: 59 intersecting 004: 36 intersecting expanding nbhd size to 2 005: 36 intersecting 006: 27 intersecting 007: 26 intersecting expanding nbhd size to 3 008: 28 intersecting 009: 19 intersecting expanding nbhd size to 4 010: 28 intersecting 011: 10 intersecting writing corrected surface to ../surf/rh.orig rm ../surf/rh.inflated #-------------------------------------------- #@# Make White Surf lh Thu Feb 11 00:34:51 UTC 2021 /output/january_2021/subject1/scripts mris_make_surfaces -aseg ../mri/aseg.presurf -white white.preaparc -noaparc -whiteonly -mgz -T1 brain.finalsurfs subject1 lh #-------------------------------------------- #@# Make White Surf rh Thu Feb 11 00:34:51 UTC 2021 /output/january_2021/subject1/scripts mris_make_surfaces -aseg ../mri/aseg.presurf -white white.preaparc -noaparc -whiteonly -mgz -T1 brain.finalsurfs subject1 rh Waiting for PID 70293 of (70293 70296) to complete... Waiting for PID 70296 of (70293 70296) to complete... mris_make_surfaces -aseg ../mri/aseg.presurf -white white.preaparc -noaparc -whiteonly -mgz -T1 brain.finalsurfs subject1 lh using white.preaparc as white matter name... only generating white matter surface using aseg volume ../mri/aseg.presurf to prevent surfaces crossing the midline not using aparc to prevent surfaces crossing the midline INFO: assuming MGZ format for volumes. using brain.finalsurfs as T1 volume... $Id: mris_make_surfaces.c,v 1.164.2.4 2016/12/13 22:26:32 zkaufman Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading volume /output/january_2021/subject1/mri/filled.mgz... reading volume /output/january_2021/subject1/mri/brain.finalsurfs.mgz... reading volume /output/january_2021/subject1/mri/../mri/aseg.presurf.mgz... reading volume /output/january_2021/subject1/mri/wm.mgz... 21472 bright wm thresholded. 1554 bright non-wm voxels segmented. reading original surface position from /output/january_2021/subject1/surf/lh.orig... computing class statistics... border white: 265829 voxels (1.58%) border gray 271496 voxels (1.62%) WM (100.0): 99.8 +- 6.8 [70.0 --> 110.0] GM (84.0) : 80.7 +- 13.1 [30.0 --> 110.0] setting MIN_GRAY_AT_WHITE_BORDER to 72.9 (was 70) setting MAX_BORDER_WHITE to 108.8 (was 105) setting MIN_BORDER_WHITE to 86.0 (was 85) setting MAX_CSF to 59.9 (was 40) setting MAX_GRAY to 95.2 (was 95) setting MAX_GRAY_AT_CSF_BORDER to 72.9 (was 75) setting MIN_GRAY_AT_CSF_BORDER to 46.8 (was 40) repositioning cortical surface to gray/white boundary smoothing T1 volume with sigma = 2.000 vertex spacing 0.81 +- 0.27 (0.02-->10.61) (max @ vno 115952 --> 116177) face area 0.28 +- 0.20 (0.00-->27.04) mean absolute distance = 0.94 +- 1.33 5024 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... using class modes intead of means, discounting robust sigmas.... intensity peaks found at WM=102+-5.2, GM=86+-10.4 mean inside = 95.9, mean outside = 84.4 smoothing surface for 5 iterations... inhibiting deformation at non-cortical midline structures... removing 3 vertex label from ripped group removing 1 vertex label from ripped group mean border=92.4, 1240 (1239) missing vertices, mean dist -0.1 [1.2 (%45.0)->0.7 (%55.0))] %33 local maxima, %59 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=2.0, host=85b04, nav=4, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 complete_dist_mat 0 rms 0 smooth_averages 0 remove_neg 0 ico_order 0 which_surface 0 target_radius 0.000000 nfields 0 scale 0.000000 desired_rms_height 0.000000 momentum 0.000000 nbhd_size 0 max_nbrs 0 niterations 25 nsurfaces 0 SURFACES 3 flags 0 (0) use curv 0 no sulc 0 no rigid align 0 mris->nsize 2 mris->hemisphere 0 randomSeed 0 smoothing T1 volume with sigma = 1.000 vertex spacing 0.89 +- 0.30 (0.05-->9.74) (max @ vno 115952 --> 116177) face area 0.28 +- 0.19 (0.00-->21.77) mean absolute distance = 0.63 +- 1.07 5208 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=1705644.8, rms=7.287 001: dt: 0.5000, sse=1043669.7, rms=5.113 (29.843%) 002: dt: 0.5000, sse=790829.9, rms=3.820 (25.284%) 003: dt: 0.5000, sse=693720.0, rms=3.172 (16.974%) 004: dt: 0.5000, sse=664878.1, rms=2.881 (9.148%) 005: dt: 0.5000, sse=633672.8, rms=2.735 (5.081%) 006: dt: 0.5000, sse=623721.2, rms=2.638 (3.549%) 007: dt: 0.5000, sse=612564.3, rms=2.563 (2.840%) 008: dt: 0.5000, sse=608572.9, rms=2.507 (2.175%) rms = 2.47, time step reduction 1 of 3 to 0.250... 009: dt: 0.5000, sse=604743.4, rms=2.465 (1.678%) 010: dt: 0.2500, sse=580623.1, rms=2.182 (11.487%) rms = 2.13, time step reduction 2 of 3 to 0.125... 011: dt: 0.2500, sse=575717.6, rms=2.135 (2.164%) rms = 2.12, time step reduction 3 of 3 to 0.062... 012: dt: 0.1250, sse=579912.8, rms=2.120 (0.699%) positioning took 1.0 minutes inhibiting deformation at non-cortical midline structures... removing 2 vertex label from ripped group removing 3 vertex label from ripped group removing 3 vertex label from ripped group removing 3 vertex label from ripped group removing 1 vertex label from ripped group removing 2 vertex label from ripped group removing 3 vertex label from ripped group removing 2 vertex label from ripped group removing 2 vertex label from ripped group mean border=93.4, 1246 (905) missing vertices, mean dist -0.4 [1.0 (%51.3)->0.3 (%48.7))] %41 local maxima, %50 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=1.0, host=85b04, nav=2, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.500 vertex spacing 0.88 +- 0.30 (0.06-->9.68) (max @ vno 114416 --> 114418) face area 0.33 +- 0.23 (0.00-->26.14) mean absolute distance = 0.56 +- 0.70 3270 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=776779.3, rms=3.179 013: dt: 0.5000, sse=699845.4, rms=2.527 (20.501%) 014: dt: 0.5000, sse=673728.9, rms=2.295 (9.180%) 015: dt: 0.5000, sse=667038.0, rms=2.216 (3.464%) 016: dt: 0.5000, sse=661771.5, rms=2.154 (2.781%) rms = 2.16, time step reduction 1 of 3 to 0.250... 017: dt: 0.2500, sse=644807.7, rms=2.005 (6.910%) 018: dt: 0.2500, sse=640691.7, rms=1.929 (3.784%) rms = 1.91, time step reduction 2 of 3 to 0.125... 019: dt: 0.2500, sse=639082.0, rms=1.907 (1.144%) rms = 1.89, time step reduction 3 of 3 to 0.062... 020: dt: 0.1250, sse=633705.0, rms=1.893 (0.769%) positioning took 0.7 minutes inhibiting deformation at non-cortical midline structures... removing 1 vertex label from ripped group removing 2 vertex label from ripped group removing 1 vertex label from ripped group removing 3 vertex label from ripped group removing 2 vertex label from ripped group removing 2 vertex label from ripped group removing 4 vertex label from ripped group removing 4 vertex label from ripped group mean border=95.4, 1281 (847) missing vertices, mean dist -0.4 [0.7 (%64.6)->0.3 (%35.4))] %63 local maxima, %28 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=0.5, host=85b04, nav=1, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.250 vertex spacing 0.87 +- 0.30 (0.05-->9.44) (max @ vno 115952 --> 116177) face area 0.32 +- 0.24 (0.00-->27.34) mean absolute distance = 0.40 +- 0.51 3953 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=802857.5, rms=3.429 021: dt: 0.5000, sse=687540.0, rms=2.414 (29.589%) 022: dt: 0.5000, sse=657195.8, rms=2.092 (13.359%) 023: dt: 0.5000, sse=647428.6, rms=2.025 (3.212%) rms = 2.00, time step reduction 1 of 3 to 0.250... 024: dt: 0.5000, sse=641770.1, rms=1.999 (1.238%) 025: dt: 0.2500, sse=628884.8, rms=1.817 (9.146%) rms = 1.79, time step reduction 2 of 3 to 0.125... 026: dt: 0.2500, sse=624607.8, rms=1.789 (1.507%) rms = 1.78, time step reduction 3 of 3 to 0.062... 027: dt: 0.1250, sse=621003.4, rms=1.778 (0.624%) positioning took 0.6 minutes inhibiting deformation at non-cortical midline structures... removing 4 vertex label from ripped group removing 2 vertex label from ripped group removing 3 vertex label from ripped group removing 1 vertex label from ripped group removing 2 vertex label from ripped group removing 2 vertex label from ripped group removing 2 vertex label from ripped group removing 4 vertex label from ripped group removing 4 vertex label from ripped group mean border=96.3, 1347 (800) missing vertices, mean dist -0.2 [0.5 (%58.7)->0.3 (%41.3))] %74 local maxima, %17 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=0.2, host=85b04, nav=0, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 writing white matter surface to /output/january_2021/subject1/surf/lh.white.preaparc... writing smoothed curvature to lh.curv 000: dt: 0.0000, sse=646278.7, rms=2.219 028: dt: 0.5000, sse=613075.9, rms=1.705 (23.172%) rms = 1.80, time step reduction 1 of 3 to 0.250... rms = 1.66, time step reduction 2 of 3 to 0.125... 029: dt: 0.2500, sse=600875.8, rms=1.656 (2.871%) rms = 1.64, time step reduction 3 of 3 to 0.062... 030: dt: 0.1250, sse=599762.9, rms=1.643 (0.779%) positioning took 0.3 minutes generating cortex label... 25 non-cortical segments detected only using segment with 8878 vertices erasing segment 0 (vno[0] = 17729) erasing segment 1 (vno[0] = 23124) erasing segment 2 (vno[0] = 26921) erasing segment 3 (vno[0] = 28632) erasing segment 4 (vno[0] = 34724) erasing segment 5 (vno[0] = 34789) erasing segment 7 (vno[0] = 37257) erasing segment 8 (vno[0] = 37313) erasing segment 9 (vno[0] = 39931) erasing segment 10 (vno[0] = 40936) erasing segment 11 (vno[0] = 42328) erasing segment 12 (vno[0] = 43286) erasing segment 13 (vno[0] = 43446) erasing segment 14 (vno[0] = 43479) erasing segment 15 (vno[0] = 44414) erasing segment 16 (vno[0] = 44461) erasing segment 17 (vno[0] = 47859) erasing segment 18 (vno[0] = 52103) erasing segment 19 (vno[0] = 58370) erasing segment 20 (vno[0] = 58625) erasing segment 21 (vno[0] = 66682) erasing segment 22 (vno[0] = 82810) erasing segment 23 (vno[0] = 115941) erasing segment 24 (vno[0] = 115999) writing cortex label to /output/january_2021/subject1/label/lh.cortex.label... writing curvature file /output/january_2021/subject1/surf/lh.curv writing smoothed area to lh.area writing curvature file /output/january_2021/subject1/surf/lh.area vertex spacing 0.87 +- 0.32 (0.02-->9.39) (max @ vno 115952 --> 116177) face area 0.32 +- 0.23 (0.00-->26.86) refinement took 4.1 minutes mris_make_surfaces -aseg ../mri/aseg.presurf -white white.preaparc -noaparc -whiteonly -mgz -T1 brain.finalsurfs subject1 rh using white.preaparc as white matter name... only generating white matter surface using aseg volume ../mri/aseg.presurf to prevent surfaces crossing the midline not using aparc to prevent surfaces crossing the midline INFO: assuming MGZ format for volumes. using brain.finalsurfs as T1 volume... $Id: mris_make_surfaces.c,v 1.164.2.4 2016/12/13 22:26:32 zkaufman Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading volume /output/january_2021/subject1/mri/filled.mgz... reading volume /output/january_2021/subject1/mri/brain.finalsurfs.mgz... reading volume /output/january_2021/subject1/mri/../mri/aseg.presurf.mgz... reading volume /output/january_2021/subject1/mri/wm.mgz... 21472 bright wm thresholded. 1554 bright non-wm voxels segmented. reading original surface position from /output/january_2021/subject1/surf/rh.orig... computing class statistics... border white: 265829 voxels (1.58%) border gray 271496 voxels (1.62%) WM (100.0): 99.8 +- 6.8 [70.0 --> 110.0] GM (84.0) : 80.7 +- 13.1 [30.0 --> 110.0] setting MIN_GRAY_AT_WHITE_BORDER to 71.9 (was 70) setting MAX_BORDER_WHITE to 108.8 (was 105) setting MIN_BORDER_WHITE to 85.0 (was 85) setting MAX_CSF to 58.9 (was 40) setting MAX_GRAY to 95.2 (was 95) setting MAX_GRAY_AT_CSF_BORDER to 71.9 (was 75) setting MIN_GRAY_AT_CSF_BORDER to 45.8 (was 40) repositioning cortical surface to gray/white boundary smoothing T1 volume with sigma = 2.000 vertex spacing 0.82 +- 0.28 (0.03-->9.37) (max @ vno 62103 --> 119688) face area 0.28 +- 0.18 (0.00-->17.19) mean absolute distance = 0.95 +- 1.34 5219 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... using class modes intead of means, discounting robust sigmas.... intensity peaks found at WM=102+-5.2, GM=85+-7.8 mean inside = 95.7, mean outside = 84.3 smoothing surface for 5 iterations... inhibiting deformation at non-cortical midline structures... removing 4 vertex label from ripped group mean border=92.4, 1482 (1482) missing vertices, mean dist -0.2 [1.2 (%46.2)->0.7 (%53.8))] %36 local maxima, %56 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=2.0, host=85b04, nav=4, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 complete_dist_mat 0 rms 0 smooth_averages 0 remove_neg 0 ico_order 0 which_surface 0 target_radius 0.000000 nfields 0 scale 0.000000 desired_rms_height 0.000000 momentum 0.000000 nbhd_size 0 max_nbrs 0 niterations 25 nsurfaces 0 SURFACES 3 flags 0 (0) use curv 0 no sulc 0 no rigid align 0 mris->nsize 2 mris->hemisphere 1 randomSeed 0 smoothing T1 volume with sigma = 1.000 vertex spacing 0.89 +- 0.30 (0.08-->9.98) (max @ vno 62103 --> 119688) face area 0.28 +- 0.18 (0.00-->14.74) mean absolute distance = 0.63 +- 1.06 5479 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=1820498.2, rms=7.533 001: dt: 0.5000, sse=1135677.0, rms=5.358 (28.871%) 002: dt: 0.5000, sse=849813.8, rms=4.017 (25.036%) 003: dt: 0.5000, sse=758689.4, rms=3.260 (18.833%) 004: dt: 0.5000, sse=696154.2, rms=2.880 (11.662%) 005: dt: 0.5000, sse=660612.2, rms=2.711 (5.883%) 006: dt: 0.5000, sse=641066.8, rms=2.580 (4.803%) 007: dt: 0.5000, sse=630044.3, rms=2.489 (3.531%) 008: dt: 0.5000, sse=623809.4, rms=2.416 (2.936%) rms = 2.38, time step reduction 1 of 3 to 0.250... 009: dt: 0.5000, sse=642086.7, rms=2.380 (1.516%) 010: dt: 0.2500, sse=593951.0, rms=2.096 (11.900%) 011: dt: 0.2500, sse=588155.9, rms=2.039 (2.724%) rms = 2.02, time step reduction 2 of 3 to 0.125... 012: dt: 0.2500, sse=585003.4, rms=2.022 (0.844%) rms = 2.00, time step reduction 3 of 3 to 0.062... 013: dt: 0.1250, sse=581184.4, rms=1.997 (1.242%) positioning took 1.2 minutes inhibiting deformation at non-cortical midline structures... removing 1 vertex label from ripped group removing 2 vertex label from ripped group removing 1 vertex label from ripped group removing 1 vertex label from ripped group mean border=93.2, 1504 (1046) missing vertices, mean dist -0.3 [1.0 (%50.4)->0.3 (%49.6))] %43 local maxima, %48 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=1.0, host=85b04, nav=2, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.500 vertex spacing 0.88 +- 0.30 (0.02-->11.14) (max @ vno 118654 --> 118519) face area 0.33 +- 0.22 (0.00-->17.26) mean absolute distance = 0.57 +- 0.71 3444 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=788000.1, rms=3.075 014: dt: 0.5000, sse=727129.5, rms=2.388 (22.325%) 015: dt: 0.5000, sse=695182.9, rms=2.158 (9.621%) 016: dt: 0.5000, sse=679688.0, rms=2.095 (2.922%) rms = 2.05, time step reduction 1 of 3 to 0.250... 017: dt: 0.5000, sse=674321.2, rms=2.047 (2.311%) 018: dt: 0.2500, sse=661380.4, rms=1.868 (8.723%) rms = 1.84, time step reduction 2 of 3 to 0.125... 019: dt: 0.2500, sse=659751.2, rms=1.836 (1.719%) rms = 1.81, time step reduction 3 of 3 to 0.062... 020: dt: 0.1250, sse=651124.1, rms=1.814 (1.216%) positioning took 0.6 minutes inhibiting deformation at non-cortical midline structures... removing 1 vertex label from ripped group removing 4 vertex label from ripped group removing 1 vertex label from ripped group removing 4 vertex label from ripped group mean border=95.2, 1530 (930) missing vertices, mean dist -0.4 [0.7 (%65.3)->0.3 (%34.7))] %65 local maxima, %26 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=0.5, host=85b04, nav=1, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.250 vertex spacing 0.87 +- 0.30 (0.03-->11.63) (max @ vno 118654 --> 118519) face area 0.32 +- 0.22 (0.00-->17.62) mean absolute distance = 0.42 +- 0.52 3274 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=839910.8, rms=3.490 021: dt: 0.5000, sse=715565.6, rms=2.457 (29.602%) 022: dt: 0.5000, sse=673706.7, rms=2.083 (15.220%) rms = 2.04, time step reduction 1 of 3 to 0.250... 023: dt: 0.5000, sse=688887.9, rms=2.038 (2.162%) 024: dt: 0.2500, sse=654646.2, rms=1.830 (10.236%) rms = 1.80, time step reduction 2 of 3 to 0.125... 025: dt: 0.2500, sse=652861.9, rms=1.805 (1.366%) rms = 1.78, time step reduction 3 of 3 to 0.062... 026: dt: 0.1250, sse=654943.3, rms=1.775 (1.612%) positioning took 0.5 minutes inhibiting deformation at non-cortical midline structures... removing 1 vertex label from ripped group removing 4 vertex label from ripped group removing 1 vertex label from ripped group removing 2 vertex label from ripped group mean border=96.2, 1612 (875) missing vertices, mean dist -0.2 [0.5 (%59.8)->0.3 (%40.2))] %76 local maxima, %16 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=0.2, host=85b04, nav=0, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 writing white matter surface to /output/january_2021/subject1/surf/rh.white.preaparc... writing smoothed curvature to rh.curv 000: dt: 0.0000, sse=692619.3, rms=2.329 027: dt: 0.5000, sse=670025.1, rms=1.767 (24.097%) rms = 1.80, time step reduction 1 of 3 to 0.250... 028: dt: 0.2500, sse=630397.4, rms=1.687 (4.549%) rms = 1.66, time step reduction 2 of 3 to 0.125... 029: dt: 0.2500, sse=636957.4, rms=1.664 (1.372%) rms = 1.62, time step reduction 3 of 3 to 0.062... 030: dt: 0.1250, sse=620038.9, rms=1.619 (2.725%) positioning took 0.4 minutes generating cortex label... 20 non-cortical segments detected only using segment with 10548 vertices erasing segment 0 (vno[0] = 22063) erasing segment 1 (vno[0] = 26451) erasing segment 2 (vno[0] = 33241) erasing segment 4 (vno[0] = 43118) erasing segment 5 (vno[0] = 44192) erasing segment 6 (vno[0] = 47584) erasing segment 7 (vno[0] = 48401) erasing segment 8 (vno[0] = 52249) erasing segment 9 (vno[0] = 53189) erasing segment 10 (vno[0] = 61970) erasing segment 11 (vno[0] = 63684) erasing segment 12 (vno[0] = 65330) erasing segment 13 (vno[0] = 65350) erasing segment 14 (vno[0] = 66905) erasing segment 15 (vno[0] = 75611) erasing segment 16 (vno[0] = 78425) erasing segment 17 (vno[0] = 85808) erasing segment 18 (vno[0] = 88830) erasing segment 19 (vno[0] = 120157) writing cortex label to /output/january_2021/subject1/label/rh.cortex.label... writing curvature file /output/january_2021/subject1/surf/rh.curv writing smoothed area to rh.area writing curvature file /output/january_2021/subject1/surf/rh.area vertex spacing 0.87 +- 0.32 (0.03-->11.77) (max @ vno 118519 --> 118654) face area 0.32 +- 0.22 (0.00-->17.22) refinement took 4.3 minutes PIDs (70293 70296) completed and logs appended. #-------------------------------------------- #@# Smooth2 lh Thu Feb 11 00:39:07 UTC 2021 /output/january_2021/subject1/scripts mris_smooth -n 3 -nw -seed 1234 ../surf/lh.white.preaparc ../surf/lh.smoothwm #-------------------------------------------- #@# Smooth2 rh Thu Feb 11 00:39:07 UTC 2021 /output/january_2021/subject1/scripts mris_smooth -n 3 -nw -seed 1234 ../surf/rh.white.preaparc ../surf/rh.smoothwm Waiting for PID 70819 of (70819 70822) to complete... Waiting for PID 70822 of (70819 70822) to complete... mris_smooth -n 3 -nw -seed 1234 ../surf/lh.white.preaparc ../surf/lh.smoothwm smoothing for 3 iterations setting seed for random number generator to 1234 smoothing surface tessellation for 3 iterations... smoothing complete - recomputing first and second fundamental forms... mris_smooth -n 3 -nw -seed 1234 ../surf/rh.white.preaparc ../surf/rh.smoothwm smoothing for 3 iterations setting seed for random number generator to 1234 smoothing surface tessellation for 3 iterations... smoothing complete - recomputing first and second fundamental forms... PIDs (70819 70822) completed and logs appended. #-------------------------------------------- #@# Inflation2 lh Thu Feb 11 00:39:12 UTC 2021 /output/january_2021/subject1/scripts mris_inflate -rusage /output/january_2021/subject1/touch/rusage.mris_inflate.lh.dat ../surf/lh.smoothwm ../surf/lh.inflated #-------------------------------------------- #@# Inflation2 rh Thu Feb 11 00:39:12 UTC 2021 /output/january_2021/subject1/scripts mris_inflate -rusage /output/january_2021/subject1/touch/rusage.mris_inflate.rh.dat ../surf/rh.smoothwm ../surf/rh.inflated Waiting for PID 70877 of (70877 70880) to complete... Waiting for PID 70880 of (70877 70880) to complete... mris_inflate -rusage /output/january_2021/subject1/touch/rusage.mris_inflate.lh.dat ../surf/lh.smoothwm ../surf/lh.inflated Reading ../surf/lh.smoothwm avg radius = 47.1 mm, total surface area = 67399 mm^2 writing inflated surface to ../surf/lh.inflated writing sulcal depths to ../surf/lh.sulc step 000: RMS=0.182 (target=0.015) step 005: RMS=0.131 (target=0.015) step 010: RMS=0.101 (target=0.015) step 015: RMS=0.083 (target=0.015) step 020: RMS=0.071 (target=0.015) step 025: RMS=0.061 (target=0.015) step 030: RMS=0.052 (target=0.015) step 035: RMS=0.046 (target=0.015) step 040: RMS=0.042 (target=0.015) step 045: RMS=0.039 (target=0.015) step 050: RMS=0.035 (target=0.015) step 055: RMS=0.033 (target=0.015) step 060: RMS=0.032 (target=0.015) inflation complete. inflation took 0.4 minutes mris_inflate utimesec 60.593537 mris_inflate stimesec 1.099447 mris_inflate ru_maxrss 188776 mris_inflate ru_ixrss 0 mris_inflate ru_idrss 0 mris_inflate ru_isrss 0 mris_inflate ru_minflt 289304 mris_inflate ru_majflt 3 mris_inflate ru_nswap 0 mris_inflate ru_inblock 104 mris_inflate ru_oublock 9232 mris_inflate ru_msgsnd 0 mris_inflate ru_msgrcv 0 mris_inflate ru_nsignals 0 mris_inflate ru_nvcsw 20592 mris_inflate ru_nivcsw 135 mris_inflate -rusage /output/january_2021/subject1/touch/rusage.mris_inflate.rh.dat ../surf/rh.smoothwm ../surf/rh.inflated Reading ../surf/rh.smoothwm avg radius = 48.1 mm, total surface area = 68835 mm^2 writing inflated surface to ../surf/rh.inflated writing sulcal depths to ../surf/rh.sulc step 000: RMS=0.179 (target=0.015) step 005: RMS=0.130 (target=0.015) step 010: RMS=0.101 (target=0.015) step 015: RMS=0.084 (target=0.015) step 020: RMS=0.071 (target=0.015) step 025: RMS=0.062 (target=0.015) step 030: RMS=0.052 (target=0.015) step 035: RMS=0.046 (target=0.015) step 040: RMS=0.041 (target=0.015) step 045: RMS=0.037 (target=0.015) step 050: RMS=0.034 (target=0.015) step 055: RMS=0.032 (target=0.015) step 060: RMS=0.031 (target=0.015) inflation complete. inflation took 0.4 minutes mris_inflate utimesec 62.019412 mris_inflate stimesec 0.859326 mris_inflate ru_maxrss 192728 mris_inflate ru_ixrss 0 mris_inflate ru_idrss 0 mris_inflate ru_isrss 0 mris_inflate ru_minflt 296826 mris_inflate ru_majflt 1 mris_inflate ru_nswap 0 mris_inflate ru_inblock 72 mris_inflate ru_oublock 9432 mris_inflate ru_msgsnd 0 mris_inflate ru_msgrcv 0 mris_inflate ru_nsignals 0 mris_inflate ru_nvcsw 21172 mris_inflate ru_nivcsw 219 PIDs (70877 70880) completed and logs appended. #-------------------------------------------- #@# Curv .H and .K lh Thu Feb 11 00:39:35 UTC 2021 /output/january_2021/subject1/surf mris_curvature -w lh.white.preaparc rm -f lh.white.H ln -s lh.white.preaparc.H lh.white.H rm -f lh.white.K ln -s lh.white.preaparc.K lh.white.K mris_curvature -thresh .999 -n -a 5 -w -distances 10 10 lh.inflated #-------------------------------------------- #@# Curv .H and .K rh Thu Feb 11 00:39:35 UTC 2021 /output/january_2021/subject1/surf mris_curvature -w rh.white.preaparc rm -f rh.white.H ln -s rh.white.preaparc.H rh.white.H rm -f rh.white.K ln -s rh.white.preaparc.K rh.white.K mris_curvature -thresh .999 -n -a 5 -w -distances 10 10 rh.inflated cd /output/january_2021/subject1/surf reconbatchjobs /output/january_2021/subject1/scripts/recon-all.log mris_curvature_white_lh.cmd rm_curvature_white_lh.H.cmd ln_curvature_white_lh.H.cmd rm_curvature_white_lh.K.cmd ln_curvature_white_lh.K.cmd mris_curvature_inflated_lh.cmd mris_curvature_white_rh.cmd rm_curvature_white_rh.H.cmd ln_curvature_white_rh.H.cmd rm_curvature_white_rh.K.cmd ln_curvature_white_rh.K.cmd mris_curvature_inflated_rh.cmd Waiting for PID 70998 of (70998 71001 71004 71007 71010 71013 71016 71019 71022 71025 71028 71031) to complete... Waiting for PID 71001 of (70998 71001 71004 71007 71010 71013 71016 71019 71022 71025 71028 71031) to complete... Waiting for PID 71004 of (70998 71001 71004 71007 71010 71013 71016 71019 71022 71025 71028 71031) to complete... Waiting for PID 71007 of (70998 71001 71004 71007 71010 71013 71016 71019 71022 71025 71028 71031) to complete... Waiting for PID 71010 of (70998 71001 71004 71007 71010 71013 71016 71019 71022 71025 71028 71031) to complete... Waiting for PID 71013 of (70998 71001 71004 71007 71010 71013 71016 71019 71022 71025 71028 71031) to complete... Waiting for PID 71016 of (70998 71001 71004 71007 71010 71013 71016 71019 71022 71025 71028 71031) to complete... Waiting for PID 71019 of (70998 71001 71004 71007 71010 71013 71016 71019 71022 71025 71028 71031) to complete... Waiting for PID 71022 of (70998 71001 71004 71007 71010 71013 71016 71019 71022 71025 71028 71031) to complete... Waiting for PID 71025 of (70998 71001 71004 71007 71010 71013 71016 71019 71022 71025 71028 71031) to complete... Waiting for PID 71028 of (70998 71001 71004 71007 71010 71013 71016 71019 71022 71025 71028 71031) to complete... Waiting for PID 71031 of (70998 71001 71004 71007 71010 71013 71016 71019 71022 71025 71028 71031) to complete... mris_curvature -w lh.white.preaparc total integrated curvature = 10.105*4pi (126.983) --> -9 handles ICI = 191.1, FI = 1689.7, variation=27629.797 writing Gaussian curvature to ./lh.white.preaparc.K...done. writing mean curvature to ./lh.white.preaparc.H...done. rm -f lh.white.H ln -s lh.white.preaparc.H lh.white.H rm -f lh.white.K ln -s lh.white.preaparc.K lh.white.K mris_curvature -thresh .999 -n -a 5 -w -distances 10 10 lh.inflated normalizing curvature values. averaging curvature patterns 5 times. sampling 10 neighbors out to a distance of 10 mm 117 vertices thresholded to be in k1 ~ [-0.57 0.53], k2 ~ [-0.24 0.14] total integrated curvature = 0.007*4pi (0.093) --> 1 handles ICI = 1.5, FI = 8.9, variation=164.307 100 vertices thresholded to be in [-0.04 0.05] writing Gaussian curvature to ./lh.inflated.K...thresholding curvature at 99.90% level curvature mean = 0.000, std = 0.003 110 vertices thresholded to be in [-0.26 0.22] done. writing mean curvature to ./lh.inflated.H...curvature mean = -0.022, std = 0.028 done. mris_curvature -w rh.white.preaparc total integrated curvature = 12.461*4pi (156.587) --> -11 handles ICI = 178.0, FI = 1539.8, variation=25250.113 writing Gaussian curvature to ./rh.white.preaparc.K...done. writing mean curvature to ./rh.white.preaparc.H...done. rm -f rh.white.H ln -s rh.white.preaparc.H rh.white.H rm -f rh.white.K ln -s rh.white.preaparc.K rh.white.K mris_curvature -thresh .999 -n -a 5 -w -distances 10 10 rh.inflated normalizing curvature values. averaging curvature patterns 5 times. sampling 10 neighbors out to a distance of 10 mm 137 vertices thresholded to be in k1 ~ [-0.94 1.01], k2 ~ [-0.37 0.16] total integrated curvature = -0.068*4pi (-0.855) --> 1 handles ICI = 1.4, FI = 9.3, variation=166.410 134 vertices thresholded to be in [-0.06 0.17] writing Gaussian curvature to ./rh.inflated.K...thresholding curvature at 99.90% level curvature mean = 0.000, std = 0.005 101 vertices thresholded to be in [-0.48 0.16] done. writing mean curvature to ./rh.inflated.H...curvature mean = -0.022, std = 0.033 done. PIDs (70998 71001 71004 71007 71010 71013 71016 71019 71022 71025 71028 71031) completed and logs appended. #----------------------------------------- #@# Curvature Stats lh Thu Feb 11 00:40:38 UTC 2021 /output/january_2021/subject1/surf mris_curvature_stats -m --writeCurvatureFiles -G -o ../stats/lh.curv.stats -F smoothwm subject1 lh curv sulc Toggling save flag on curvature files [ ok ] Outputting results using filestem [ ../stats/lh.curv.stats ] Toggling save flag on curvature files [ ok ] Setting surface [ subject1/lh.smoothwm ] Reading surface... [ ok ] Setting texture [ curv ] Reading texture... [ ok ] Setting texture [ sulc ] Reading texture...Gb_filter = 0 [ ok ] Calculating Discrete Principal Curvatures... Determining geometric order for vertex faces... [####################] [ ok ] Determining KH curvatures... [####################] [ ok ] Determining k1k2 curvatures... [####################] [ ok ] deltaViolations [ 246 ] Gb_filter = 0 WARN: S lookup min: -0.402179 WARN: S explicit min: 0.000000 vertex = 314 #----------------------------------------- #@# Curvature Stats rh Thu Feb 11 00:40:42 UTC 2021 /output/january_2021/subject1/surf mris_curvature_stats -m --writeCurvatureFiles -G -o ../stats/rh.curv.stats -F smoothwm subject1 rh curv sulc Toggling save flag on curvature files [ ok ] Outputting results using filestem [ ../stats/rh.curv.stats ] Toggling save flag on curvature files [ ok ] Setting surface [ subject1/rh.smoothwm ] Reading surface... [ ok ] Setting texture [ curv ] Reading texture... [ ok ] Setting texture [ sulc ] Reading texture...Gb_filter = 0 [ ok ] Calculating Discrete Principal Curvatures... Determining geometric order for vertex faces... [####################] [ ok ] Determining KH curvatures... [####################] [ ok ] Determining k1k2 curvatures... [####################] [ ok ] deltaViolations [ 238 ] Gb_filter = 0 WARN: S lookup min: -0.639201 WARN: S explicit min: 0.000000 vertex = 93 #-------------------------------------------- #@# Sphere lh Thu Feb 11 00:40:46 UTC 2021 /output/january_2021/subject1/scripts mris_sphere -rusage /output/january_2021/subject1/touch/rusage.mris_sphere.lh.dat -seed 1234 ../surf/lh.inflated ../surf/lh.sphere #-------------------------------------------- #@# Sphere rh Thu Feb 11 00:40:46 UTC 2021 /output/january_2021/subject1/scripts mris_sphere -rusage /output/january_2021/subject1/touch/rusage.mris_sphere.rh.dat -seed 1234 ../surf/rh.inflated ../surf/rh.sphere Waiting for PID 71278 of (71278 71281) to complete... Waiting for PID 71281 of (71278 71281) to complete... mris_sphere -rusage /output/january_2021/subject1/touch/rusage.mris_sphere.lh.dat -seed 1234 ../surf/lh.inflated ../surf/lh.sphere setting seed for random number genererator to 1234 $Id: mris_sphere.c,v 1.61 2016/01/20 23:42:15 greve Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading original vertex positions... unfolding cortex into spherical form... surface projected - minimizing metric distortion... == Number of threads available to mris_sphere for OpenMP = 4 == scaling brain by 0.335... MRISunfold() max_passes = 1 ------- tol=5.0e-01, sigma=0.0, host=85b04, nav=1024, nbrs=2, l_area=1.000, l_dist=1.000 using quadratic fit line minimization complete_dist_mat 0 rms 0 smooth_averages 0 remove_neg 0 ico_order 0 which_surface 0 target_radius 0.000000 nfields 0 scale 1.000000 desired_rms_height -1.000000 momentum 0.900000 nbhd_size 7 max_nbrs 8 niterations 25 nsurfaces 0 SURFACES 3 flags 0 (0) use curv 0 no sulc 0 no rigid align 0 mris->nsize 2 mris->hemisphere 0 randomSeed 1234 -------------------- mrisRemoveNegativeArea() pass 1: epoch 1 of 3 starting distance error %21.52 pass 1: epoch 2 of 3 starting distance error %21.36 unfolding complete - removing small folds... starting distance error %20.01 removing remaining folds... final distance error %20.08 MRISunfold() return, current seed 1234 -01: dt=0.0000, 569 negative triangles 312: dt=0.9900, 569 negative triangles 313: dt=0.9900, 345 negative triangles 314: dt=0.9900, 307 negative triangles 315: dt=0.9900, 258 negative triangles 316: dt=0.9900, 262 negative triangles 317: dt=0.9900, 252 negative triangles 318: dt=0.9900, 222 negative triangles 319: dt=0.9900, 219 negative triangles 320: dt=0.9900, 194 negative triangles 321: dt=0.9900, 181 negative triangles 322: dt=0.9900, 180 negative triangles 323: dt=0.9900, 184 negative triangles 324: dt=0.9900, 180 negative triangles 325: dt=0.9900, 157 negative triangles 326: dt=0.9900, 160 negative triangles 327: dt=0.9900, 155 negative triangles 328: dt=0.9900, 151 negative triangles 329: dt=0.9900, 140 negative triangles 330: dt=0.9900, 130 negative triangles 331: dt=0.9900, 139 negative triangles 332: dt=0.9900, 123 negative triangles 333: dt=0.9900, 127 negative triangles 334: dt=0.9900, 124 negative triangles 335: dt=0.9900, 112 negative triangles 336: dt=0.9900, 106 negative triangles 337: dt=0.9900, 106 negative triangles 338: dt=0.9900, 108 negative triangles 339: dt=0.9900, 100 negative triangles 340: dt=0.9900, 106 negative triangles 341: dt=0.9900, 103 negative triangles 342: dt=0.9900, 100 negative triangles 343: dt=0.9900, 98 negative triangles 344: dt=0.9900, 94 negative triangles 345: dt=0.9900, 90 negative triangles 346: dt=0.9900, 96 negative triangles 347: dt=0.9900, 95 negative triangles 348: dt=0.9900, 83 negative triangles 349: dt=0.9900, 91 negative triangles 350: dt=0.9900, 87 negative triangles 351: dt=0.9900, 84 negative triangles 352: dt=0.9900, 85 negative triangles 353: dt=0.9900, 79 negative triangles 354: dt=0.9900, 83 negative triangles 355: dt=0.9900, 86 negative triangles 356: dt=0.9900, 86 negative triangles 357: dt=0.9900, 83 negative triangles 358: dt=0.9900, 86 negative triangles 359: dt=0.9900, 82 negative triangles 360: dt=0.9900, 92 negative triangles 361: dt=0.9900, 86 negative triangles 362: dt=0.9900, 83 negative triangles 363: dt=0.9405, 80 negative triangles 364: dt=0.9405, 79 negative triangles 365: dt=0.9405, 80 negative triangles 366: dt=0.9405, 75 negative triangles 367: dt=0.9405, 76 negative triangles 368: dt=0.9405, 82 negative triangles 369: dt=0.9405, 72 negative triangles 370: dt=0.9405, 75 negative triangles 371: dt=0.9405, 72 negative triangles 372: dt=0.9405, 75 negative triangles 373: dt=0.9405, 77 negative triangles 374: dt=0.9405, 74 negative triangles 375: dt=0.9405, 69 negative triangles 376: dt=0.9405, 68 negative triangles 377: dt=0.9405, 74 negative triangles 378: dt=0.9405, 66 negative triangles 379: dt=0.9405, 73 negative triangles 380: dt=0.9405, 67 negative triangles 381: dt=0.9405, 77 negative triangles 382: dt=0.9405, 68 negative triangles 383: dt=0.9405, 72 negative triangles 384: dt=0.9405, 64 negative triangles 385: dt=0.9405, 60 negative triangles 386: dt=0.9405, 64 negative triangles 387: dt=0.9405, 59 negative triangles 388: dt=0.9405, 62 negative triangles 389: dt=0.9405, 63 negative triangles 390: dt=0.9405, 58 negative triangles 391: dt=0.9405, 62 negative triangles 392: dt=0.9405, 57 negative triangles 393: dt=0.9405, 58 negative triangles 394: dt=0.9405, 50 negative triangles 395: dt=0.9405, 55 negative triangles 396: dt=0.9405, 49 negative triangles 397: dt=0.9405, 47 negative triangles 398: dt=0.9405, 53 negative triangles 399: dt=0.9405, 46 negative triangles 400: dt=0.9405, 46 negative triangles 401: dt=0.9405, 46 negative triangles 402: dt=0.9405, 40 negative triangles 403: dt=0.9405, 38 negative triangles 404: dt=0.9405, 42 negative triangles 405: dt=0.9405, 42 negative triangles 406: dt=0.9405, 45 negative triangles 407: dt=0.9405, 40 negative triangles 408: dt=0.9405, 39 negative triangles 409: dt=0.9405, 38 negative triangles 410: dt=0.9405, 35 negative triangles 411: dt=0.9405, 38 negative triangles 412: dt=0.9405, 40 negative triangles 413: dt=0.9405, 37 negative triangles 414: dt=0.9405, 39 negative triangles 415: dt=0.9405, 37 negative triangles 416: dt=0.9405, 40 negative triangles 417: dt=0.9405, 41 negative triangles 418: dt=0.9405, 38 negative triangles 419: dt=0.9405, 36 negative triangles 420: dt=0.8935, 40 negative triangles 421: dt=0.8935, 39 negative triangles 422: dt=0.8935, 36 negative triangles 423: dt=0.8935, 37 negative triangles 424: dt=0.8935, 36 negative triangles 425: dt=0.8935, 39 negative triangles 426: dt=0.8935, 37 negative triangles 427: dt=0.8935, 36 negative triangles 428: dt=0.8935, 43 negative triangles 429: dt=0.8935, 36 negative triangles 430: dt=0.8935, 33 negative triangles 431: dt=0.8935, 39 negative triangles 432: dt=0.8935, 35 negative triangles 433: dt=0.8935, 34 negative triangles 434: dt=0.8935, 38 negative triangles 435: dt=0.8935, 37 negative triangles 436: dt=0.8935, 33 negative triangles 437: dt=0.8935, 37 negative triangles 438: dt=0.8935, 37 negative triangles 439: dt=0.8935, 34 negative triangles 440: dt=0.8488, 39 negative triangles 441: dt=0.8488, 38 negative triangles 442: dt=0.8488, 36 negative triangles 443: dt=0.8488, 37 negative triangles 444: dt=0.8488, 31 negative triangles 445: dt=0.8488, 24 negative triangles 446: dt=0.8488, 31 negative triangles 447: dt=0.8488, 30 negative triangles 448: dt=0.8488, 32 negative triangles 449: dt=0.8488, 28 negative triangles 450: dt=0.8488, 24 negative triangles 451: dt=0.8488, 29 negative triangles 452: dt=0.8488, 27 negative triangles 453: dt=0.8488, 29 negative triangles 454: dt=0.8488, 26 negative triangles 455: dt=0.8488, 22 negative triangles 456: dt=0.8488, 21 negative triangles 457: dt=0.8488, 22 negative triangles 458: dt=0.8488, 22 negative triangles 459: dt=0.8488, 19 negative triangles 460: dt=0.8488, 23 negative triangles 461: dt=0.8488, 25 negative triangles 462: dt=0.8488, 21 negative triangles 463: dt=0.8488, 17 negative triangles 464: dt=0.8488, 21 negative triangles 465: dt=0.8488, 21 negative triangles 466: dt=0.8488, 22 negative triangles 467: dt=0.8488, 17 negative triangles 468: dt=0.8488, 17 negative triangles 469: dt=0.8488, 19 negative triangles 470: dt=0.8488, 15 negative triangles 471: dt=0.8488, 16 negative triangles 472: dt=0.8488, 13 negative triangles 473: dt=0.8488, 17 negative triangles 474: dt=0.8488, 7 negative triangles 475: dt=0.8488, 11 negative triangles 476: dt=0.8488, 10 negative triangles 477: dt=0.8488, 8 negative triangles 478: dt=0.8488, 6 negative triangles 479: dt=0.8488, 9 negative triangles 480: dt=0.8488, 5 negative triangles 481: dt=0.8488, 7 negative triangles 482: dt=0.8488, 4 negative triangles 483: dt=0.8488, 6 negative triangles 484: dt=0.8488, 3 negative triangles 485: dt=0.8488, 7 negative triangles 486: dt=0.8488, 6 negative triangles 487: dt=0.8488, 9 negative triangles 488: dt=0.8488, 5 negative triangles 489: dt=0.8488, 1 negative triangles 490: dt=0.8488, 1 negative triangles writing spherical brain to ../surf/lh.sphere spherical transformation took 0.40 hours mris_sphere utimesec 4791.903114 mris_sphere stimesec 18.161358 mris_sphere ru_maxrss 260752 mris_sphere ru_ixrss 0 mris_sphere ru_idrss 0 mris_sphere ru_isrss 0 mris_sphere ru_minflt 14209030 mris_sphere ru_majflt 2 mris_sphere ru_nswap 0 mris_sphere ru_inblock 192 mris_sphere ru_oublock 8504 mris_sphere ru_msgsnd 0 mris_sphere ru_msgrcv 0 mris_sphere ru_nsignals 0 mris_sphere ru_nvcsw 104009 mris_sphere ru_nivcsw 14435 FSRUNTIME@ mris_sphere 0.3975 hours 1 threads mris_sphere -rusage /output/january_2021/subject1/touch/rusage.mris_sphere.rh.dat -seed 1234 ../surf/rh.inflated ../surf/rh.sphere setting seed for random number genererator to 1234 $Id: mris_sphere.c,v 1.61 2016/01/20 23:42:15 greve Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading original vertex positions... unfolding cortex into spherical form... surface projected - minimizing metric distortion... == Number of threads available to mris_sphere for OpenMP = 4 == scaling brain by 0.321... MRISunfold() max_passes = 1 ------- tol=5.0e-01, sigma=0.0, host=85b04, nav=1024, nbrs=2, l_area=1.000, l_dist=1.000 using quadratic fit line minimization complete_dist_mat 0 rms 0 smooth_averages 0 remove_neg 0 ico_order 0 which_surface 0 target_radius 0.000000 nfields 0 scale 1.000000 desired_rms_height -1.000000 momentum 0.900000 nbhd_size 7 max_nbrs 8 niterations 25 nsurfaces 0 SURFACES 3 flags 0 (0) use curv 0 no sulc 0 no rigid align 0 mris->nsize 2 mris->hemisphere 1 randomSeed 1234 -------------------- mrisRemoveNegativeArea() pass 1: epoch 1 of 3 starting distance error %23.03 pass 1: epoch 2 of 3 starting distance error %22.76 unfolding complete - removing small folds... starting distance error %21.02 removing remaining folds... final distance error %21.11 MRISunfold() return, current seed 1234 -01: dt=0.0000, 742 negative triangles 327: dt=0.9900, 742 negative triangles 328: dt=0.9900, 333 negative triangles 329: dt=0.9900, 254 negative triangles 330: dt=0.9900, 239 negative triangles 331: dt=0.9900, 211 negative triangles 332: dt=0.9900, 208 negative triangles 333: dt=0.9900, 187 negative triangles 334: dt=0.9900, 193 negative triangles 335: dt=0.9900, 169 negative triangles 336: dt=0.9900, 153 negative triangles 337: dt=0.9900, 156 negative triangles 338: dt=0.9900, 151 negative triangles 339: dt=0.9900, 151 negative triangles 340: dt=0.9900, 141 negative triangles 341: dt=0.9900, 125 negative triangles 342: dt=0.9900, 104 negative triangles 343: dt=0.9900, 99 negative triangles 344: dt=0.9900, 85 negative triangles 345: dt=0.9900, 88 negative triangles 346: dt=0.9900, 71 negative triangles 347: dt=0.9900, 66 negative triangles 348: dt=0.9900, 62 negative triangles 349: dt=0.9900, 56 negative triangles 350: dt=0.9900, 43 negative triangles 351: dt=0.9900, 52 negative triangles 352: dt=0.9900, 34 negative triangles 353: dt=0.9900, 38 negative triangles 354: dt=0.9900, 30 negative triangles 355: dt=0.9900, 35 negative triangles 356: dt=0.9900, 36 negative triangles 357: dt=0.9900, 33 negative triangles 358: dt=0.9900, 30 negative triangles 359: dt=0.9900, 25 negative triangles 360: dt=0.9900, 25 negative triangles 361: dt=0.9900, 20 negative triangles 362: dt=0.9900, 22 negative triangles 363: dt=0.9900, 25 negative triangles 364: dt=0.9900, 20 negative triangles 365: dt=0.9900, 22 negative triangles 366: dt=0.9900, 21 negative triangles 367: dt=0.9900, 23 negative triangles 368: dt=0.9900, 23 negative triangles 369: dt=0.9900, 19 negative triangles 370: dt=0.9900, 22 negative triangles 371: dt=0.9900, 19 negative triangles 372: dt=0.9900, 16 negative triangles 373: dt=0.9900, 17 negative triangles 374: dt=0.9900, 19 negative triangles 375: dt=0.9900, 18 negative triangles 376: dt=0.9900, 14 negative triangles 377: dt=0.9900, 16 negative triangles 378: dt=0.9900, 16 negative triangles 379: dt=0.9900, 11 negative triangles 380: dt=0.9900, 14 negative triangles 381: dt=0.9900, 15 negative triangles 382: dt=0.9900, 10 negative triangles 383: dt=0.9900, 10 negative triangles 384: dt=0.9900, 8 negative triangles 385: dt=0.9900, 4 negative triangles 386: dt=0.9900, 8 negative triangles 387: dt=0.9900, 5 negative triangles 388: dt=0.9900, 1 negative triangles 389: dt=0.9900, 5 negative triangles 390: dt=0.9900, 4 negative triangles 391: dt=0.9900, 4 negative triangles 392: dt=0.9900, 7 negative triangles 393: dt=0.9900, 5 negative triangles 394: dt=0.9900, 4 negative triangles 395: dt=0.9900, 5 negative triangles 396: dt=0.9900, 5 negative triangles 397: dt=0.9900, 4 negative triangles 398: dt=0.9405, 4 negative triangles 399: dt=0.9405, 3 negative triangles 400: dt=0.9405, 4 negative triangles 401: dt=0.9405, 3 negative triangles writing spherical brain to ../surf/rh.sphere spherical transformation took 0.36 hours mris_sphere utimesec 4243.412789 mris_sphere stimesec 16.422712 mris_sphere ru_maxrss 255532 mris_sphere ru_ixrss 0 mris_sphere ru_idrss 0 mris_sphere ru_isrss 0 mris_sphere ru_minflt 12496709 mris_sphere ru_majflt 1 mris_sphere ru_nswap 0 mris_sphere ru_inblock 8 mris_sphere ru_oublock 8592 mris_sphere ru_msgsnd 0 mris_sphere ru_msgrcv 0 mris_sphere ru_nsignals 0 mris_sphere ru_nvcsw 94827 mris_sphere ru_nivcsw 14880 FSRUNTIME@ mris_sphere 0.3589 hours 1 threads PIDs (71278 71281) completed and logs appended. #-------------------------------------------- #@# Surf Reg lh Thu Feb 11 01:04:37 UTC 2021 /output/january_2021/subject1/scripts mris_register -curv -rusage /output/january_2021/subject1/touch/rusage.mris_register.lh.dat ../surf/lh.sphere /opt/freesurfer/average/lh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif ../surf/lh.sphere.reg #-------------------------------------------- #@# Surf Reg rh Thu Feb 11 01:04:37 UTC 2021 /output/january_2021/subject1/scripts mris_register -curv -rusage /output/january_2021/subject1/touch/rusage.mris_register.rh.dat ../surf/rh.sphere /opt/freesurfer/average/rh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif ../surf/rh.sphere.reg Waiting for PID 74002 of (74002 74005) to complete... Waiting for PID 74005 of (74002 74005) to complete... mris_register -curv -rusage /output/january_2021/subject1/touch/rusage.mris_register.lh.dat ../surf/lh.sphere /opt/freesurfer/average/lh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif ../surf/lh.sphere.reg using smoothwm curvature for final alignment cwd /output/january_2021/subject1/scripts cmdline mris_register -curv -rusage /output/january_2021/subject1/touch/rusage.mris_register.lh.dat ../surf/lh.sphere /opt/freesurfer/average/lh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif ../surf/lh.sphere.reg 0 inflated.H 1 sulc 2 smoothwm (computed) $Id: mris_register.c,v 1.63 2016/01/20 23:43:04 greve Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading surface from ../surf/lh.sphere... reading template parameterization from /opt/freesurfer/average/lh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif... MRISregister() ------- max_passes = 4 min_degrees = 0.500000 max_degrees = 64.000000 nangles = 8 tol=5.0e-01, sigma=0.0, host=85b04, nav=1024, nbrs=1, l_extern=10000.000, l_parea=0.200, l_nlarea=1.000, l_corr=1.000, l_dist=5.000 using quadratic fit line minimization complete_dist_mat 0 rms 0 smooth_averages 0 remove_neg 0 ico_order 0 which_surface 0 target_radius 0.000000 nfields 0 scale 0.000000 desired_rms_height -1.000000 momentum 0.950000 nbhd_size -10 max_nbrs 10 niterations 25 nsurfaces 0 SURFACES 3 flags 16 (10) use curv 16 no sulc 0 no rigid align 0 mris->nsize 1 mris->hemisphere 0 randomSeed 0 tol=5.0e-01, sigma=0.0, host=85b04, nav=1024, nbrs=1, l_extern=10000.000, l_parea=0.200, l_nlarea=1.000, l_corr=1.000, l_dist=5.000 using quadratic fit line minimization -------------------- 1 Reading lh.sulc curvature mean = -0.000, std = 5.087 curvature mean = 0.033, std = 0.826 curvature mean = 0.026, std = 0.874 Starting MRISrigidBodyAlignGlobal() d=64.00 min @ (16.00, -16.00, 32.00) sse = 332528.2, tmin=1.1809 d=32.00 min @ (-8.00, -8.00, -24.00) sse = 328842.9, tmin=2.3729 d=16.00 min @ (4.00, 0.00, 0.00) sse = 326450.9, tmin=3.5697 d=4.00 min @ (0.00, 0.00, 1.00) sse = 326282.9, tmin=5.9554 d=2.00 min @ (-0.50, -0.50, 0.00) sse = 326165.8, tmin=7.1664 d=1.00 min @ (0.25, 0.00, -0.25) sse = 326151.8, tmin=8.3580 d=0.50 min @ (-0.12, 0.00, 0.12) sse = 326136.5, tmin=9.5446 tol=1.0e+00, sigma=0.5, host=85b04, nav=1024, nbrs=1, l_extern=10000.000, l_parea=0.200, l_nlarea=1.000, l_corr=0.050, l_spring=0.500, l_dist=5.000 using quadratic fit line minimization MRISrigidBodyAlignGlobal() done 9.54 min curvature mean = -0.003, std = 0.820 curvature mean = 0.014, std = 0.938 curvature mean = -0.011, std = 0.827 curvature mean = 0.005, std = 0.970 curvature mean = -0.012, std = 0.828 curvature mean = 0.001, std = 0.985 2 Reading smoothwm curvature mean = -0.033, std = 0.936 curvature mean = 0.036, std = 0.242 curvature mean = 0.018, std = 0.109 curvature mean = 0.031, std = 0.302 curvature mean = 0.007, std = 0.169 curvature mean = 0.031, std = 0.330 curvature mean = 0.010, std = 0.564 curvature mean = 0.031, std = 0.340 curvature mean = 0.002, std = 0.289 MRISregister() return, current seed 0 -01: dt=0.0000, 180 negative triangles 121: dt=0.9900, 180 negative triangles expanding nbhd size to 1 122: dt=0.9900, 242 negative triangles 123: dt=0.9900, 177 negative triangles 124: dt=0.9900, 172 negative triangles 125: dt=0.9900, 177 negative triangles 126: dt=0.9900, 161 negative triangles 127: dt=0.9900, 156 negative triangles 128: dt=0.9900, 151 negative triangles 129: dt=0.9900, 147 negative triangles 130: dt=0.9900, 139 negative triangles 131: dt=0.9900, 141 negative triangles 132: dt=0.9900, 120 negative triangles 133: dt=0.9900, 119 negative triangles 134: dt=0.9900, 110 negative triangles 135: dt=0.9900, 105 negative triangles 136: dt=0.9900, 98 negative triangles 137: dt=0.9900, 93 negative triangles 138: dt=0.9900, 93 negative triangles 139: dt=0.9900, 88 negative triangles 140: dt=0.9900, 86 negative triangles 141: dt=0.9900, 87 negative triangles 142: dt=0.9900, 94 negative triangles 143: dt=0.9900, 83 negative triangles 144: dt=0.9900, 81 negative triangles 145: dt=0.9900, 76 negative triangles 146: dt=0.9900, 73 negative triangles 147: dt=0.9900, 76 negative triangles 148: dt=0.9900, 68 negative triangles 149: dt=0.9900, 67 negative triangles 150: dt=0.9900, 70 negative triangles 151: dt=0.9900, 68 negative triangles 152: dt=0.9900, 66 negative triangles 153: dt=0.9900, 71 negative triangles 154: dt=0.9900, 63 negative triangles 155: dt=0.9900, 66 negative triangles 156: dt=0.9900, 63 negative triangles 157: dt=0.9900, 62 negative triangles 158: dt=0.9900, 60 negative triangles 159: dt=0.9900, 63 negative triangles 160: dt=0.9900, 55 negative triangles 161: dt=0.9900, 54 negative triangles 162: dt=0.9900, 51 negative triangles 163: dt=0.9900, 49 negative triangles 164: dt=0.9900, 50 negative triangles 165: dt=0.9900, 45 negative triangles 166: dt=0.9900, 45 negative triangles 167: dt=0.9900, 47 negative triangles 168: dt=0.9900, 45 negative triangles 169: dt=0.9900, 43 negative triangles 170: dt=0.9900, 43 negative triangles 171: dt=0.9900, 39 negative triangles 172: dt=0.9900, 36 negative triangles 173: dt=0.9900, 35 negative triangles 174: dt=0.9900, 31 negative triangles 175: dt=0.9900, 31 negative triangles 176: dt=0.9900, 28 negative triangles 177: dt=0.9900, 28 negative triangles 178: dt=0.9900, 29 negative triangles 179: dt=0.9900, 27 negative triangles 180: dt=0.9900, 27 negative triangles 181: dt=0.9900, 28 negative triangles 182: dt=0.9900, 29 negative triangles 183: dt=0.9900, 29 negative triangles 184: dt=0.9900, 27 negative triangles 185: dt=0.9900, 26 negative triangles 186: dt=0.9900, 25 negative triangles 187: dt=0.9900, 25 negative triangles 188: dt=0.9900, 30 negative triangles 189: dt=0.9900, 29 negative triangles 190: dt=0.9900, 27 negative triangles 191: dt=0.9900, 26 negative triangles 192: dt=0.9900, 25 negative triangles 193: dt=0.9900, 25 negative triangles 194: dt=0.9900, 25 negative triangles 195: dt=0.9900, 24 negative triangles 196: dt=0.9900, 27 negative triangles 197: dt=0.9900, 27 negative triangles 198: dt=0.9900, 25 negative triangles 199: dt=0.9900, 24 negative triangles 200: dt=0.9900, 25 negative triangles 201: dt=0.9900, 24 negative triangles 202: dt=0.9900, 25 negative triangles 203: dt=0.9900, 25 negative triangles 204: dt=0.9900, 24 negative triangles 205: dt=0.9405, 26 negative triangles 206: dt=0.9405, 23 negative triangles 207: dt=0.9405, 23 negative triangles 208: dt=0.9405, 22 negative triangles 209: dt=0.9405, 24 negative triangles 210: dt=0.9405, 21 negative triangles 211: dt=0.9405, 21 negative triangles 212: dt=0.9405, 18 negative triangles 213: dt=0.9405, 19 negative triangles 214: dt=0.9405, 20 negative triangles 215: dt=0.9405, 20 negative triangles 216: dt=0.9405, 19 negative triangles 217: dt=0.9405, 17 negative triangles 218: dt=0.9405, 18 negative triangles 219: dt=0.9405, 17 negative triangles 220: dt=0.9405, 18 negative triangles 221: dt=0.9405, 17 negative triangles 222: dt=0.9405, 17 negative triangles 223: dt=0.9405, 17 negative triangles 224: dt=0.9405, 15 negative triangles 225: dt=0.9405, 17 negative triangles 226: dt=0.9405, 15 negative triangles 227: dt=0.9405, 16 negative triangles 228: dt=0.9405, 14 negative triangles 229: dt=0.9405, 16 negative triangles 230: dt=0.9405, 17 negative triangles 231: dt=0.9405, 15 negative triangles 232: dt=0.9405, 16 negative triangles 233: dt=0.9405, 14 negative triangles 234: dt=0.9405, 15 negative triangles 235: dt=0.9405, 13 negative triangles 236: dt=0.9405, 14 negative triangles 237: dt=0.9405, 13 negative triangles 238: dt=0.9405, 16 negative triangles 239: dt=0.9405, 14 negative triangles 240: dt=0.9405, 13 negative triangles 241: dt=0.9405, 12 negative triangles 242: dt=0.9405, 8 negative triangles 243: dt=0.9405, 7 negative triangles 244: dt=0.9405, 4 negative triangles 245: dt=0.9405, 7 negative triangles 246: dt=0.9405, 4 negative triangles 247: dt=0.9405, 7 negative triangles 248: dt=0.9405, 3 negative triangles 249: dt=0.9405, 7 negative triangles 250: dt=0.9405, 2 negative triangles 251: dt=0.9405, 6 negative triangles 252: dt=0.9405, 2 negative triangles 253: dt=0.9405, 4 negative triangles 254: dt=0.9405, 2 negative triangles 255: dt=0.9405, 2 negative triangles 256: dt=0.9405, 1 negative triangles 257: dt=0.9405, 3 negative triangles 258: dt=0.9405, 2 negative triangles 259: dt=0.9405, 1 negative triangles 260: dt=0.9405, 3 negative triangles 261: dt=0.9405, 2 negative triangles 262: dt=0.9405, 1 negative triangles writing registered surface to ../surf/lh.sphere.reg... registration took 0.63 hours mris_register utimesec 6188.640687 mris_register stimesec 13.218010 mris_register ru_maxrss 242420 mris_register ru_ixrss 0 mris_register ru_idrss 0 mris_register ru_isrss 0 mris_register ru_minflt 9720559 mris_register ru_majflt 2 mris_register ru_nswap 0 mris_register ru_inblock 104 mris_register ru_oublock 8432 mris_register ru_msgsnd 0 mris_register ru_msgrcv 0 mris_register ru_nsignals 0 mris_register ru_nvcsw 55038 mris_register ru_nivcsw 12215 FSRUNTIME@ mris_register 0.6295 hours 1 threads mris_register -curv -rusage /output/january_2021/subject1/touch/rusage.mris_register.rh.dat ../surf/rh.sphere /opt/freesurfer/average/rh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif ../surf/rh.sphere.reg using smoothwm curvature for final alignment cwd /output/january_2021/subject1/scripts cmdline mris_register -curv -rusage /output/january_2021/subject1/touch/rusage.mris_register.rh.dat ../surf/rh.sphere /opt/freesurfer/average/rh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif ../surf/rh.sphere.reg 0 inflated.H 1 sulc 2 smoothwm (computed) $Id: mris_register.c,v 1.63 2016/01/20 23:43:04 greve Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading surface from ../surf/rh.sphere... reading template parameterization from /opt/freesurfer/average/rh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif... MRISregister() ------- max_passes = 4 min_degrees = 0.500000 max_degrees = 64.000000 nangles = 8 tol=5.0e-01, sigma=0.0, host=85b04, nav=1024, nbrs=1, l_extern=10000.000, l_parea=0.200, l_nlarea=1.000, l_corr=1.000, l_dist=5.000 using quadratic fit line minimization complete_dist_mat 0 rms 0 smooth_averages 0 remove_neg 0 ico_order 0 which_surface 0 target_radius 0.000000 nfields 0 scale 0.000000 desired_rms_height -1.000000 momentum 0.950000 nbhd_size -10 max_nbrs 10 niterations 25 nsurfaces 0 SURFACES 3 flags 16 (10) use curv 16 no sulc 0 no rigid align 0 mris->nsize 1 mris->hemisphere 1 randomSeed 0 tol=5.0e-01, sigma=0.0, host=85b04, nav=1024, nbrs=1, l_extern=10000.000, l_parea=0.200, l_nlarea=1.000, l_corr=1.000, l_dist=5.000 using quadratic fit line minimization -------------------- 1 Reading rh.sulc curvature mean = -0.000, std = 5.248 curvature mean = 0.020, std = 0.797 curvature mean = 0.028, std = 0.864 Starting MRISrigidBodyAlignGlobal() d=64.00 min @ (0.00, 0.00, 32.00) sse = 379587.1, tmin=1.2066 d=32.00 min @ (-8.00, -8.00, -16.00) sse = 371342.4, tmin=2.4158 d=16.00 min @ (4.00, 0.00, -4.00) sse = 366077.1, tmin=3.6335 d=8.00 min @ (0.00, 0.00, -2.00) sse = 365285.1, tmin=4.8532 d=4.00 min @ (-1.00, -1.00, 0.00) sse = 364747.8, tmin=6.0682 d=2.00 min @ (0.00, 0.50, 0.50) sse = 364634.2, tmin=7.3159 d=1.00 min @ (0.25, 0.00, -0.25) sse = 364621.6, tmin=8.5258 tol=1.0e+00, sigma=0.5, host=85b04, nav=1024, nbrs=1, l_extern=10000.000, l_parea=0.200, l_nlarea=1.000, l_corr=0.050, l_spring=0.500, l_dist=5.000 using quadratic fit line minimization MRISrigidBodyAlignGlobal() done 9.75 min curvature mean = -0.010, std = 0.798 curvature mean = 0.009, std = 0.939 curvature mean = -0.016, std = 0.804 curvature mean = 0.003, std = 0.973 curvature mean = -0.017, std = 0.805 curvature mean = 0.000, std = 0.989 2 Reading smoothwm curvature mean = -0.035, std = 0.409 curvature mean = 0.034, std = 0.236 curvature mean = 0.042, std = 0.247 curvature mean = 0.031, std = 0.296 curvature mean = 0.014, std = 0.382 curvature mean = 0.031, std = 0.322 curvature mean = 0.008, std = 0.487 curvature mean = 0.031, std = 0.333 curvature mean = 0.003, std = 0.574 MRISregister() return, current seed 0 -01: dt=0.0000, 169 negative triangles 128: dt=0.9900, 169 negative triangles expanding nbhd size to 1 129: dt=0.9900, 190 negative triangles 130: dt=0.9900, 138 negative triangles 131: dt=0.9900, 146 negative triangles 132: dt=0.9900, 144 negative triangles 133: dt=0.9900, 138 negative triangles 134: dt=0.9900, 132 negative triangles 135: dt=0.9900, 130 negative triangles 136: dt=0.9900, 129 negative triangles 137: dt=0.9900, 114 negative triangles 138: dt=0.9900, 108 negative triangles 139: dt=0.9900, 115 negative triangles 140: dt=0.9900, 108 negative triangles 141: dt=0.9900, 107 negative triangles 142: dt=0.9900, 103 negative triangles 143: dt=0.9900, 92 negative triangles 144: dt=0.9900, 101 negative triangles 145: dt=0.9900, 95 negative triangles 146: dt=0.9900, 88 negative triangles 147: dt=0.9900, 82 negative triangles 148: dt=0.9900, 87 negative triangles 149: dt=0.9900, 88 negative triangles 150: dt=0.9900, 83 negative triangles 151: dt=0.9900, 78 negative triangles 152: dt=0.9900, 71 negative triangles 153: dt=0.9900, 71 negative triangles 154: dt=0.9900, 66 negative triangles 155: dt=0.9900, 66 negative triangles 156: dt=0.9900, 56 negative triangles 157: dt=0.9900, 58 negative triangles 158: dt=0.9900, 51 negative triangles 159: dt=0.9900, 54 negative triangles 160: dt=0.9900, 50 negative triangles 161: dt=0.9900, 54 negative triangles 162: dt=0.9900, 52 negative triangles 163: dt=0.9900, 50 negative triangles 164: dt=0.9900, 46 negative triangles 165: dt=0.9900, 51 negative triangles 166: dt=0.9900, 54 negative triangles 167: dt=0.9900, 49 negative triangles 168: dt=0.9900, 49 negative triangles 169: dt=0.9900, 45 negative triangles 170: dt=0.9900, 51 negative triangles 171: dt=0.9900, 51 negative triangles 172: dt=0.9900, 45 negative triangles 173: dt=0.9900, 43 negative triangles 174: dt=0.9900, 39 negative triangles 175: dt=0.9900, 39 negative triangles 176: dt=0.9900, 40 negative triangles 177: dt=0.9900, 39 negative triangles 178: dt=0.9900, 40 negative triangles 179: dt=0.9900, 34 negative triangles 180: dt=0.9900, 39 negative triangles 181: dt=0.9900, 37 negative triangles 182: dt=0.9900, 41 negative triangles 183: dt=0.9900, 35 negative triangles 184: dt=0.9900, 34 negative triangles 185: dt=0.9900, 31 negative triangles 186: dt=0.9900, 32 negative triangles 187: dt=0.9900, 29 negative triangles 188: dt=0.9900, 29 negative triangles 189: dt=0.9900, 33 negative triangles 190: dt=0.9900, 33 negative triangles 191: dt=0.9900, 29 negative triangles 192: dt=0.9900, 30 negative triangles 193: dt=0.9900, 34 negative triangles 194: dt=0.9900, 25 negative triangles 195: dt=0.9900, 29 negative triangles 196: dt=0.9900, 22 negative triangles 197: dt=0.9900, 21 negative triangles 198: dt=0.9900, 19 negative triangles 199: dt=0.9900, 20 negative triangles 200: dt=0.9900, 15 negative triangles 201: dt=0.9900, 12 negative triangles 202: dt=0.9900, 13 negative triangles 203: dt=0.9900, 14 negative triangles 204: dt=0.9900, 17 negative triangles 205: dt=0.9900, 12 negative triangles 206: dt=0.9900, 12 negative triangles 207: dt=0.9900, 11 negative triangles 208: dt=0.9900, 9 negative triangles 209: dt=0.9900, 11 negative triangles 210: dt=0.9900, 11 negative triangles 211: dt=0.9900, 11 negative triangles 212: dt=0.9900, 15 negative triangles 213: dt=0.9900, 13 negative triangles 214: dt=0.9900, 12 negative triangles 215: dt=0.9900, 10 negative triangles 216: dt=0.9900, 10 negative triangles 217: dt=0.9900, 10 negative triangles 218: dt=0.9900, 7 negative triangles 219: dt=0.9900, 7 negative triangles 220: dt=0.9900, 7 negative triangles 221: dt=0.9900, 4 negative triangles 222: dt=0.9900, 5 negative triangles 223: dt=0.9900, 7 negative triangles 224: dt=0.9900, 4 negative triangles 225: dt=0.9900, 2 negative triangles 226: dt=0.9900, 2 negative triangles 227: dt=0.9900, 1 negative triangles 228: dt=0.9900, 3 negative triangles 229: dt=0.9900, 3 negative triangles 230: dt=0.9900, 1 negative triangles 231: dt=0.9900, 3 negative triangles writing registered surface to ../surf/rh.sphere.reg... registration took 0.61 hours mris_register utimesec 5854.881538 mris_register stimesec 17.825185 mris_register ru_maxrss 247532 mris_register ru_ixrss 0 mris_register ru_idrss 0 mris_register ru_isrss 0 mris_register ru_minflt 11510073 mris_register ru_majflt 2 mris_register ru_nswap 0 mris_register ru_inblock 120 mris_register ru_oublock 8608 mris_register ru_msgsnd 0 mris_register ru_msgrcv 0 mris_register ru_nsignals 0 mris_register ru_nvcsw 51382 mris_register ru_nivcsw 20514 FSRUNTIME@ mris_register 0.6126 hours 1 threads PIDs (74002 74005) completed and logs appended. #-------------------------------------------- #@# Jacobian white lh Thu Feb 11 01:42:23 UTC 2021 /output/january_2021/subject1/scripts mris_jacobian ../surf/lh.white.preaparc ../surf/lh.sphere.reg ../surf/lh.jacobian_white #-------------------------------------------- #@# Jacobian white rh Thu Feb 11 01:42:23 UTC 2021 /output/january_2021/subject1/scripts mris_jacobian ../surf/rh.white.preaparc ../surf/rh.sphere.reg ../surf/rh.jacobian_white Waiting for PID 78286 of (78286 78289) to complete... Waiting for PID 78289 of (78286 78289) to complete... mris_jacobian ../surf/lh.white.preaparc ../surf/lh.sphere.reg ../surf/lh.jacobian_white reading surface from ../surf/lh.white.preaparc... writing curvature file ../surf/lh.jacobian_white mris_jacobian ../surf/rh.white.preaparc ../surf/rh.sphere.reg ../surf/rh.jacobian_white reading surface from ../surf/rh.white.preaparc... writing curvature file ../surf/rh.jacobian_white PIDs (78286 78289) completed and logs appended. #-------------------------------------------- #@# AvgCurv lh Thu Feb 11 01:42:25 UTC 2021 /output/january_2021/subject1/scripts mrisp_paint -a 5 /opt/freesurfer/average/lh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif#6 ../surf/lh.sphere.reg ../surf/lh.avg_curv #-------------------------------------------- #@# AvgCurv rh Thu Feb 11 01:42:25 UTC 2021 /output/january_2021/subject1/scripts mrisp_paint -a 5 /opt/freesurfer/average/rh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif#6 ../surf/rh.sphere.reg ../surf/rh.avg_curv Waiting for PID 78338 of (78338 78341) to complete... Waiting for PID 78341 of (78338 78341) to complete... mrisp_paint -a 5 /opt/freesurfer/average/lh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif#6 ../surf/lh.sphere.reg ../surf/lh.avg_curv averaging curvature patterns 5 times... reading surface from ../surf/lh.sphere.reg... reading template parameterization from /opt/freesurfer/average/lh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif... writing curvature file to ../surf/lh.avg_curv... mrisp_paint -a 5 /opt/freesurfer/average/rh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif#6 ../surf/rh.sphere.reg ../surf/rh.avg_curv averaging curvature patterns 5 times... reading surface from ../surf/rh.sphere.reg... reading template parameterization from /opt/freesurfer/average/rh.folding.atlas.acfb40.noaparc.i12.2016-08-02.tif... writing curvature file to ../surf/rh.avg_curv... PIDs (78338 78341) completed and logs appended. #----------------------------------------- #@# Cortical Parc lh Thu Feb 11 01:42:27 UTC 2021 /output/january_2021/subject1/scripts mris_ca_label -l ../label/lh.cortex.label -aseg ../mri/aseg.presurf.mgz -seed 1234 subject1 lh ../surf/lh.sphere.reg /opt/freesurfer/average/lh.DKaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ../label/lh.aparc.annot #----------------------------------------- #@# Cortical Parc rh Thu Feb 11 01:42:27 UTC 2021 /output/january_2021/subject1/scripts mris_ca_label -l ../label/rh.cortex.label -aseg ../mri/aseg.presurf.mgz -seed 1234 subject1 rh ../surf/rh.sphere.reg /opt/freesurfer/average/rh.DKaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ../label/rh.aparc.annot Waiting for PID 78389 of (78389 78393) to complete... Waiting for PID 78393 of (78389 78393) to complete... mris_ca_label -l ../label/lh.cortex.label -aseg ../mri/aseg.presurf.mgz -seed 1234 subject1 lh ../surf/lh.sphere.reg /opt/freesurfer/average/lh.DKaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ../label/lh.aparc.annot setting seed for random number generator to 1234 using ../mri/aseg.presurf.mgz aseg volume to correct midline $Id: mris_ca_label.c,v 1.37 2014/02/04 17:46:42 fischl Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading atlas from /opt/freesurfer/average/lh.DKaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs... reading color table from GCSA file.... average std = 0.8 using min determinant for regularization = 0.006 0 singular and 342 ill-conditioned covariance matrices regularized input 0: MEAN CURVATURE, flags 0, avgs 5, name mean_curvature labeling surface... 1176 labels changed using aseg relabeling using gibbs priors... 000: 2947 changed, 117888 examined... 001: 749 changed, 12151 examined... 002: 192 changed, 4007 examined... 003: 62 changed, 1153 examined... 004: 16 changed, 386 examined... 005: 7 changed, 91 examined... 006: 5 changed, 47 examined... 007: 1 changed, 31 examined... 008: 0 changed, 9 examined... 271 labels changed using aseg 000: 107 total segments, 65 labels (298 vertices) changed 001: 43 total segments, 1 labels (3 vertices) changed 002: 41 total segments, 2 labels (4 vertices) changed 003: 39 total segments, 0 labels (0 vertices) changed 10 filter iterations complete (10 requested, 9 changed) rationalizing unknown annotations with cortex label relabeling unknown label... relabeling corpuscallosum label... 1419 vertices marked for relabeling... 1419 labels changed in reclassification. writing output to ../label/lh.aparc.annot... classification took 0 minutes and 13 seconds. mris_ca_label -l ../label/rh.cortex.label -aseg ../mri/aseg.presurf.mgz -seed 1234 subject1 rh ../surf/rh.sphere.reg /opt/freesurfer/average/rh.DKaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ../label/rh.aparc.annot setting seed for random number generator to 1234 using ../mri/aseg.presurf.mgz aseg volume to correct midline $Id: mris_ca_label.c,v 1.37 2014/02/04 17:46:42 fischl Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading atlas from /opt/freesurfer/average/rh.DKaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs... reading color table from GCSA file.... average std = 0.7 using min determinant for regularization = 0.004 0 singular and 309 ill-conditioned covariance matrices regularized input 0: MEAN CURVATURE, flags 0, avgs 5, name mean_curvature labeling surface... 2032 labels changed using aseg relabeling using gibbs priors... 000: 2587 changed, 120537 examined... 001: 629 changed, 11240 examined... 002: 177 changed, 3474 examined... 003: 53 changed, 986 examined... 004: 19 changed, 308 examined... 005: 10 changed, 124 examined... 006: 8 changed, 60 examined... 007: 6 changed, 42 examined... 008: 2 changed, 33 examined... 009: 2 changed, 16 examined... 010: 1 changed, 12 examined... 011: 0 changed, 7 examined... 337 labels changed using aseg 000: 124 total segments, 86 labels (699 vertices) changed 001: 41 total segments, 3 labels (5 vertices) changed 002: 38 total segments, 0 labels (0 vertices) changed 10 filter iterations complete (10 requested, 1 changed) rationalizing unknown annotations with cortex label relabeling unknown label... relabeling corpuscallosum label... 1144 vertices marked for relabeling... 1144 labels changed in reclassification. writing output to ../label/rh.aparc.annot... classification took 0 minutes and 13 seconds. PIDs (78389 78393) completed and logs appended. #-------------------------------------------- #@# Make Pial Surf lh Thu Feb 11 01:42:40 UTC 2021 /output/january_2021/subject1/scripts mris_make_surfaces -orig_white white.preaparc -orig_pial white.preaparc -aseg ../mri/aseg.presurf -mgz -T1 brain.finalsurfs subject1 lh #-------------------------------------------- #@# Make Pial Surf rh Thu Feb 11 01:42:40 UTC 2021 /output/january_2021/subject1/scripts mris_make_surfaces -orig_white white.preaparc -orig_pial white.preaparc -aseg ../mri/aseg.presurf -mgz -T1 brain.finalsurfs subject1 rh Waiting for PID 78462 of (78462 78465) to complete... Waiting for PID 78465 of (78462 78465) to complete... mris_make_surfaces -orig_white white.preaparc -orig_pial white.preaparc -aseg ../mri/aseg.presurf -mgz -T1 brain.finalsurfs subject1 lh using white.preaparc starting white location... using white.preaparc starting pial locations... using aseg volume ../mri/aseg.presurf to prevent surfaces crossing the midline INFO: assuming MGZ format for volumes. using brain.finalsurfs as T1 volume... $Id: mris_make_surfaces.c,v 1.164.2.4 2016/12/13 22:26:32 zkaufman Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading volume /output/january_2021/subject1/mri/filled.mgz... reading volume /output/january_2021/subject1/mri/brain.finalsurfs.mgz... reading volume /output/january_2021/subject1/mri/../mri/aseg.presurf.mgz... reading volume /output/january_2021/subject1/mri/wm.mgz... 21472 bright wm thresholded. 1554 bright non-wm voxels segmented. reading original surface position from /output/january_2021/subject1/surf/lh.orig... computing class statistics... border white: 265829 voxels (1.58%) border gray 271496 voxels (1.62%) WM (100.0): 99.8 +- 6.8 [70.0 --> 110.0] GM (84.0) : 80.7 +- 13.1 [30.0 --> 110.0] setting MIN_GRAY_AT_WHITE_BORDER to 72.9 (was 70) setting MAX_BORDER_WHITE to 108.8 (was 105) setting MIN_BORDER_WHITE to 86.0 (was 85) setting MAX_CSF to 59.9 (was 40) setting MAX_GRAY to 95.2 (was 95) setting MAX_GRAY_AT_CSF_BORDER to 72.9 (was 75) setting MIN_GRAY_AT_CSF_BORDER to 46.8 (was 40) using class modes intead of means, discounting robust sigmas.... intensity peaks found at WM=102+-5.2, GM=86+-10.4 mean inside = 95.9, mean outside = 84.4 smoothing surface for 5 iterations... reading initial white vertex positions from white.preaparc... reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) repositioning cortical surface to gray/white boundary smoothing T1 volume with sigma = 2.000 vertex spacing 0.87 +- 0.32 (0.02-->9.39) (max @ vno 115952 --> 116177) face area 0.32 +- 0.23 (0.00-->26.88) mean absolute distance = 0.96 +- 1.23 4358 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... inhibiting deformation at non-cortical midline structures... deleting segment 0 with 187 points - only 0.00% unknown removing 1 vertex label from ripped group deleting segment 1 with 1 points - only 0.00% unknown deleting segment 2 with 47 points - only 0.00% unknown deleting segment 3 with 22 points - only 0.00% unknown deleting segment 4 with 43 points - only 0.00% unknown deleting segment 5 with 120 points - only 0.00% unknown deleting segment 6 with 189 points - only 0.00% unknown deleting segment 7 with 19 points - only 0.00% unknown deleting segment 8 with 6 points - only 0.00% unknown deleting segment 9 with 73 points - only 0.00% unknown deleting segment 10 with 5 points - only 0.00% unknown deleting segment 11 with 38 points - only 0.00% unknown deleting segment 12 with 63 points - only 0.00% unknown deleting segment 13 with 37 points - only 0.00% unknown removing 3 vertex label from ripped group deleting segment 14 with 3 points - only 0.00% unknown deleting segment 16 with 16 points - only 0.00% unknown deleting segment 17 with 90 points - only 0.00% unknown removing 3 vertex label from ripped group removing 4 vertex label from ripped group deleting segment 20 with 4 points - only 0.00% unknown deleting segment 21 with 151 points - only 0.00% unknown deleting segment 22 with 14 points - only 0.00% unknown deleting segment 23 with 705 points - only 0.00% unknown deleting segment 24 with 15 points - only 0.00% unknown deleting segment 25 with 8 points - only 0.00% unknown removing 3 vertex label from ripped group deleting segment 26 with 3 points - only 0.00% unknown mean border=92.5, 1369 (1261) missing vertices, mean dist 0.3 [1.9 (%18.0)->0.8 (%82.0))] %34 local maxima, %59 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=2.0, host=85b04, nav=4, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 complete_dist_mat 0 rms 0 smooth_averages 0 remove_neg 0 ico_order 0 which_surface 0 target_radius 0.000000 nfields 0 scale 0.000000 desired_rms_height 0.000000 momentum 0.000000 nbhd_size 0 max_nbrs 0 niterations 25 nsurfaces 0 SURFACES 3 flags 0 (0) use curv 0 no sulc 0 no rigid align 0 mris->nsize 2 mris->hemisphere 0 randomSeed 0 smoothing T1 volume with sigma = 1.000 vertex spacing 0.89 +- 0.30 (0.06-->10.18) (max @ vno 115952 --> 116177) face area 0.32 +- 0.22 (0.00-->26.59) mean absolute distance = 0.62 +- 1.06 5599 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=1194392.5, rms=5.340 001: dt: 0.5000, sse=871678.0, rms=3.772 (29.370%) 002: dt: 0.5000, sse=742417.8, rms=2.964 (21.417%) 003: dt: 0.5000, sse=707786.7, rms=2.646 (10.724%) 004: dt: 0.5000, sse=678028.7, rms=2.449 (7.464%) 005: dt: 0.5000, sse=675803.0, rms=2.376 (2.949%) 006: dt: 0.5000, sse=662038.1, rms=2.287 (3.752%) rms = 2.28, time step reduction 1 of 3 to 0.250... 007: dt: 0.5000, sse=668402.0, rms=2.283 (0.190%) 008: dt: 0.2500, sse=642850.4, rms=2.003 (12.275%) rms = 1.96, time step reduction 2 of 3 to 0.125... 009: dt: 0.2500, sse=631871.8, rms=1.958 (2.237%) rms = 1.94, time step reduction 3 of 3 to 0.062... 010: dt: 0.1250, sse=630394.6, rms=1.944 (0.727%) positioning took 1.2 minutes inhibiting deformation at non-cortical midline structures... deleting segment 0 with 300 points - only 0.00% unknown deleting segment 1 with 32 points - only 0.00% unknown deleting segment 2 with 13 points - only 0.00% unknown deleting segment 3 with 9 points - only 0.00% unknown deleting segment 4 with 14 points - only 0.00% unknown deleting segment 5 with 38 points - only 0.00% unknown deleting segment 6 with 167 points - only 0.00% unknown deleting segment 7 with 218 points - only 0.00% unknown deleting segment 8 with 21 points - only 0.00% unknown deleting segment 9 with 23 points - only 0.00% unknown deleting segment 10 with 43 points - only 0.00% unknown deleting segment 11 with 34 points - only 0.00% unknown removing 4 vertex label from ripped group deleting segment 12 with 4 points - only 0.00% unknown removing 3 vertex label from ripped group deleting segment 13 with 3 points - only 0.00% unknown deleting segment 14 with 115 points - only 0.00% unknown removing 3 vertex label from ripped group deleting segment 16 with 148 points - only 0.00% unknown deleting segment 17 with 5 points - only 0.00% unknown deleting segment 18 with 518 points - only 0.00% unknown deleting segment 19 with 5 points - only 0.00% unknown deleting segment 21 with 10 points - only 0.00% unknown deleting segment 22 with 11 points - only 0.00% unknown removing 3 vertex label from ripped group mean border=93.4, 1325 (932) missing vertices, mean dist -0.3 [1.0 (%49.3)->0.3 (%50.7))] %42 local maxima, %51 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=1.0, host=85b04, nav=2, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.500 vertex spacing 0.88 +- 0.30 (0.06-->10.33) (max @ vno 115952 --> 116177) face area 0.33 +- 0.24 (0.00-->27.89) mean absolute distance = 0.57 +- 0.71 3480 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=756338.5, rms=2.894 011: dt: 0.5000, sse=701386.5, rms=2.295 (20.683%) 012: dt: 0.5000, sse=680488.9, rms=2.108 (8.163%) rms = 2.07, time step reduction 1 of 3 to 0.250... 013: dt: 0.5000, sse=672999.8, rms=2.069 (1.834%) 014: dt: 0.2500, sse=651889.0, rms=1.888 (8.773%) rms = 1.84, time step reduction 2 of 3 to 0.125... 015: dt: 0.2500, sse=649103.9, rms=1.844 (2.319%) rms = 1.83, time step reduction 3 of 3 to 0.062... 016: dt: 0.1250, sse=647176.6, rms=1.830 (0.747%) positioning took 0.7 minutes inhibiting deformation at non-cortical midline structures... deleting segment 0 with 316 points - only 0.00% unknown deleting segment 1 with 39 points - only 0.00% unknown deleting segment 2 with 9 points - only 0.00% unknown deleting segment 3 with 22 points - only 0.00% unknown deleting segment 4 with 39 points - only 0.00% unknown deleting segment 5 with 177 points - only 0.00% unknown deleting segment 6 with 227 points - only 0.00% unknown deleting segment 7 with 14 points - only 0.00% unknown deleting segment 8 with 38 points - only 0.00% unknown deleting segment 9 with 79 points - only 0.00% unknown deleting segment 10 with 34 points - only 0.00% unknown removing 3 vertex label from ripped group deleting segment 11 with 3 points - only 0.00% unknown deleting segment 12 with 80 points - only 0.00% unknown removing 4 vertex label from ripped group deleting segment 14 with 141 points - only 0.00% unknown deleting segment 15 with 22 points - only 0.00% unknown deleting segment 16 with 552 points - only 0.00% unknown deleting segment 17 with 17 points - only 0.00% unknown deleting segment 18 with 9 points - only 0.00% unknown removing 4 vertex label from ripped group removing 3 vertex label from ripped group mean border=95.4, 1364 (870) missing vertices, mean dist -0.4 [0.7 (%64.7)->0.3 (%35.3))] %65 local maxima, %28 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=0.5, host=85b04, nav=1, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.250 vertex spacing 0.87 +- 0.31 (0.03-->10.64) (max @ vno 115952 --> 116177) face area 0.33 +- 0.24 (0.00-->29.06) mean absolute distance = 0.40 +- 0.52 4082 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=817050.2, rms=3.379 017: dt: 0.5000, sse=698040.1, rms=2.346 (30.561%) 018: dt: 0.5000, sse=658638.6, rms=1.996 (14.918%) 019: dt: 0.5000, sse=662827.9, rms=1.921 (3.786%) rms = 1.89, time step reduction 1 of 3 to 0.250... 020: dt: 0.5000, sse=648150.6, rms=1.888 (1.698%) 021: dt: 0.2500, sse=633840.0, rms=1.698 (10.051%) rms = 1.67, time step reduction 2 of 3 to 0.125... 022: dt: 0.2500, sse=634396.8, rms=1.668 (1.806%) rms = 1.66, time step reduction 3 of 3 to 0.062... 023: dt: 0.1250, sse=627868.0, rms=1.657 (0.670%) positioning took 0.6 minutes inhibiting deformation at non-cortical midline structures... deleting segment 0 with 49 points - only 0.00% unknown deleting segment 1 with 15 points - only 0.00% unknown deleting segment 2 with 48 points - only 0.00% unknown deleting segment 3 with 9 points - only 0.00% unknown deleting segment 4 with 253 points - only 0.00% unknown deleting segment 5 with 39 points - only 0.00% unknown deleting segment 6 with 174 points - only 0.00% unknown deleting segment 7 with 236 points - only 0.00% unknown deleting segment 8 with 18 points - only 0.00% unknown removing 3 vertex label from ripped group deleting segment 9 with 3 points - only 0.00% unknown deleting segment 10 with 42 points - only 0.00% unknown removing 1 vertex label from ripped group deleting segment 11 with 1 points - only 0.00% unknown removing 2 vertex label from ripped group deleting segment 12 with 2 points - only 0.00% unknown deleting segment 13 with 78 points - only 0.00% unknown deleting segment 14 with 37 points - only 0.00% unknown deleting segment 15 with 6 points - only 0.00% unknown deleting segment 16 with 126 points - only 0.00% unknown removing 3 vertex label from ripped group deleting segment 18 with 154 points - only 0.00% unknown deleting segment 19 with 14 points - only 0.00% unknown deleting segment 20 with 661 points - only 0.00% unknown deleting segment 21 with 18 points - only 0.00% unknown deleting segment 22 with 9 points - only 0.00% unknown mean border=96.3, 1484 (835) missing vertices, mean dist -0.2 [0.5 (%58.7)->0.3 (%41.3))] %75 local maxima, %17 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=0.2, host=85b04, nav=0, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 writing white matter surface to /output/january_2021/subject1/surf/lh.white... writing smoothed curvature to lh.curv 000: dt: 0.0000, sse=652704.3, rms=2.107 024: dt: 0.5000, sse=620526.3, rms=1.558 (26.073%) rms = 1.66, time step reduction 1 of 3 to 0.250... 025: dt: 0.2500, sse=606470.1, rms=1.503 (3.472%) rms = 1.50, time step reduction 2 of 3 to 0.125... 026: dt: 0.2500, sse=610817.2, rms=1.500 (0.259%) rms = 1.48, time step reduction 3 of 3 to 0.062... 027: dt: 0.1250, sse=604562.7, rms=1.483 (1.091%) positioning took 0.4 minutes generating cortex label... 27 non-cortical segments detected only using segment with 8891 vertices erasing segment 0 (vno[0] = 16028) erasing segment 1 (vno[0] = 29667) erasing segment 2 (vno[0] = 29670) erasing segment 3 (vno[0] = 32289) erasing segment 4 (vno[0] = 33099) erasing segment 5 (vno[0] = 34724) erasing segment 7 (vno[0] = 36520) erasing segment 8 (vno[0] = 37313) erasing segment 9 (vno[0] = 37370) erasing segment 10 (vno[0] = 39931) erasing segment 11 (vno[0] = 39988) erasing segment 12 (vno[0] = 40948) erasing segment 13 (vno[0] = 43519) erasing segment 14 (vno[0] = 43531) erasing segment 15 (vno[0] = 44414) erasing segment 16 (vno[0] = 44417) erasing segment 17 (vno[0] = 44437) erasing segment 18 (vno[0] = 44450) erasing segment 19 (vno[0] = 45284) erasing segment 20 (vno[0] = 46147) erasing segment 21 (vno[0] = 47859) erasing segment 22 (vno[0] = 51254) erasing segment 23 (vno[0] = 56796) erasing segment 24 (vno[0] = 62927) erasing segment 25 (vno[0] = 67693) erasing segment 26 (vno[0] = 82810) writing cortex label to /output/january_2021/subject1/label/lh.cortex.label... writing curvature file /output/january_2021/subject1/surf/lh.curv writing smoothed area to lh.area writing curvature file /output/january_2021/subject1/surf/lh.area vertex spacing 0.87 +- 0.32 (0.03-->10.60) (max @ vno 115952 --> 116177) face area 0.32 +- 0.24 (0.00-->28.80) repositioning cortical surface to gray/csf boundary. smoothing T1 volume with sigma = 2.000 averaging target values for 5 iterations... inhibiting deformation at non-cortical midline structures... deleting segment 0 with 24 points - only 0.00% unknown deleting segment 1 with 202 points - only 0.00% unknown deleting segment 2 with 7 points - only 0.00% unknown deleting segment 3 with 64 points - only 0.00% unknown deleting segment 4 with 6 points - only 0.00% unknown deleting segment 5 with 15 points - only 0.00% unknown removing 3 vertex label from ripped group deleting segment 6 with 3 points - only 0.00% unknown deleting segment 7 with 9 points - only 0.00% unknown deleting segment 9 with 335 points - only 0.00% unknown deleting segment 10 with 12 points - only 0.00% unknown removing 1 vertex label from ripped group deleting segment 11 with 1 points - only 0.00% unknown removing 1 vertex label from ripped group deleting segment 12 with 1 points - only 0.00% unknown deleting segment 13 with 386 points - only 0.00% unknown deleting segment 15 with 33 points - only 0.00% unknown deleting segment 16 with 255 points - only 0.00% unknown deleting segment 17 with 39 points - only 0.00% unknown deleting segment 18 with 15 points - only 0.00% unknown deleting segment 19 with 12 points - only 0.00% unknown smoothing surface for 5 iterations... reading initial pial vertex positions from white.preaparc... mean border=69.0, 801 (801) missing vertices, mean dist 2.1 [2.4 (%0.5)->2.8 (%99.5))] %29 local maxima, %39 large gradients and %24 min vals, 207 gradients ignored perforing initial smooth deformation to move away from white surface tol=1.0e-04, sigma=2.0, host=85b04, nav=16, nbrs=2, l_surf_repulse=1.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.05 000: dt: 0.0000, sse=17646500.0, rms=27.931 001: dt: 0.0500, sse=16463344.0, rms=26.948 (3.518%) 002: dt: 0.0500, sse=15601019.0, rms=26.209 (2.745%) 003: dt: 0.0500, sse=14923296.0, rms=25.612 (2.276%) 004: dt: 0.0500, sse=14360381.0, rms=25.106 (1.976%) 005: dt: 0.0500, sse=13873654.0, rms=24.660 (1.777%) 006: dt: 0.0500, sse=13439955.0, rms=24.256 (1.640%) 007: dt: 0.0500, sse=13044815.0, rms=23.881 (1.544%) 008: dt: 0.0500, sse=12678880.0, rms=23.529 (1.475%) 009: dt: 0.0500, sse=12335777.0, rms=23.194 (1.424%) 010: dt: 0.0500, sse=12010453.0, rms=22.872 (1.389%) positioning took 1.1 minutes mean border=68.7, 606 (442) missing vertices, mean dist 1.7 [1.5 (%0.6)->2.3 (%99.4))] %30 local maxima, %39 large gradients and %24 min vals, 231 gradients ignored tol=1.0e-04, sigma=2.0, host=85b04, nav=16, nbrs=2, l_surf_repulse=1.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.05 000: dt: 0.0000, sse=13065167.0, rms=23.864 011: dt: 0.0500, sse=12751733.0, rms=23.564 (1.260%) 012: dt: 0.0500, sse=12450946.0, rms=23.271 (1.240%) 013: dt: 0.0500, sse=12160681.0, rms=22.986 (1.227%) 014: dt: 0.0500, sse=11880138.0, rms=22.707 (1.216%) 015: dt: 0.0500, sse=11608770.0, rms=22.433 (1.205%) 016: dt: 0.0500, sse=11345732.0, rms=22.164 (1.197%) 017: dt: 0.0500, sse=11089662.0, rms=21.900 (1.194%) 018: dt: 0.0500, sse=10839995.0, rms=21.639 (1.192%) 019: dt: 0.0500, sse=10596569.0, rms=21.381 (1.191%) 020: dt: 0.0500, sse=10358394.0, rms=21.126 (1.194%) positioning took 0.9 minutes mean border=68.5, 542 (301) missing vertices, mean dist 1.5 [0.7 (%1.5)->2.0 (%98.5))] %31 local maxima, %39 large gradients and %23 min vals, 209 gradients ignored tol=1.0e-04, sigma=2.0, host=85b04, nav=16, nbrs=2, l_surf_repulse=1.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.05 000: dt: 0.0000, sse=10543319.0, rms=21.312 021: dt: 0.0500, sse=10302478.0, rms=21.053 (1.214%) 022: dt: 0.0500, sse=10067127.0, rms=20.797 (1.215%) 023: dt: 0.0500, sse=9834900.0, rms=20.542 (1.229%) 024: dt: 0.0500, sse=9608129.0, rms=20.289 (1.231%) 025: dt: 0.0500, sse=9386089.0, rms=20.038 (1.235%) 026: dt: 0.0500, sse=9168349.0, rms=19.790 (1.242%) 027: dt: 0.0500, sse=8953349.0, rms=19.541 (1.258%) 028: dt: 0.0500, sse=8739366.0, rms=19.290 (1.284%) 029: dt: 0.0500, sse=8526843.0, rms=19.037 (1.309%) 030: dt: 0.0500, sse=8315556.0, rms=18.783 (1.337%) positioning took 0.7 minutes mean border=68.3, 572 (228) missing vertices, mean dist 1.2 [0.2 (%8.7)->1.8 (%91.3))] %31 local maxima, %39 large gradients and %23 min vals, 179 gradients ignored tol=1.0e-04, sigma=2.0, host=85b04, nav=16, nbrs=2, l_surf_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 1.000 averaging target values for 5 iterations... 000: dt: 0.0000, sse=8405455.0, rms=18.881 031: dt: 0.5000, sse=6786326.5, rms=16.820 (10.916%) 032: dt: 0.5000, sse=5386060.0, rms=14.803 (11.989%) 033: dt: 0.5000, sse=4225890.0, rms=12.899 (12.860%) 034: dt: 0.5000, sse=3337946.8, rms=11.220 (13.017%) 035: dt: 0.5000, sse=2720874.2, rms=9.889 (11.862%) 036: dt: 0.5000, sse=2311403.2, rms=8.891 (10.099%) 037: dt: 0.5000, sse=2055008.9, rms=8.208 (7.679%) 038: dt: 0.5000, sse=1892873.0, rms=7.736 (5.749%) 039: dt: 0.5000, sse=1786501.8, rms=7.416 (4.141%) 040: dt: 0.5000, sse=1708110.2, rms=7.162 (3.424%) 041: dt: 0.5000, sse=1649812.1, rms=6.975 (2.615%) 042: dt: 0.5000, sse=1599509.4, rms=6.800 (2.498%) 043: dt: 0.5000, sse=1566027.0, rms=6.688 (1.654%) 044: dt: 0.5000, sse=1535275.9, rms=6.574 (1.695%) 045: dt: 0.5000, sse=1513899.6, rms=6.501 (1.123%) 046: dt: 0.5000, sse=1490926.2, rms=6.412 (1.357%) rms = 6.36, time step reduction 1 of 3 to 0.250... 047: dt: 0.5000, sse=1476826.1, rms=6.364 (0.751%) 048: dt: 0.2500, sse=1311755.9, rms=5.697 (10.482%) 049: dt: 0.2500, sse=1262729.6, rms=5.497 (3.510%) rms = 5.47, time step reduction 2 of 3 to 0.125... 050: dt: 0.2500, sse=1257225.8, rms=5.468 (0.529%) 051: dt: 0.1250, sse=1220263.9, rms=5.305 (2.987%) rms = 5.28, time step reduction 3 of 3 to 0.062... 052: dt: 0.1250, sse=1213715.2, rms=5.275 (0.554%) positioning took 2.0 minutes mean border=66.6, 2015 (102) missing vertices, mean dist 0.2 [0.2 (%39.4)->0.6 (%60.6))] %46 local maxima, %27 large gradients and %19 min vals, 192 gradients ignored tol=1.0e-04, sigma=1.0, host=85b04, nav=8, nbrs=2, l_surf_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.500 averaging target values for 5 iterations... 000: dt: 0.0000, sse=1467040.8, rms=5.748 053: dt: 0.5000, sse=1404817.1, rms=5.508 (4.169%) 054: dt: 0.5000, sse=1336416.1, rms=5.239 (4.896%) rms = 5.27, time step reduction 1 of 3 to 0.250... 055: dt: 0.2500, sse=1159507.9, rms=4.360 (16.779%) 056: dt: 0.2500, sse=1101531.5, rms=4.028 (7.601%) 057: dt: 0.2500, sse=1085690.5, rms=3.934 (2.330%) 058: dt: 0.2500, sse=1071248.5, rms=3.850 (2.153%) rms = 3.82, time step reduction 2 of 3 to 0.125... 059: dt: 0.2500, sse=1066380.0, rms=3.820 (0.783%) 060: dt: 0.1250, sse=1027149.6, rms=3.565 (6.663%) rms = 3.52, time step reduction 3 of 3 to 0.062... 061: dt: 0.1250, sse=1019565.6, rms=3.516 (1.371%) positioning took 1.0 minutes mean border=65.7, 2281 (78) missing vertices, mean dist 0.1 [0.2 (%44.1)->0.4 (%55.9))] %55 local maxima, %18 large gradients and %19 min vals, 192 gradients ignored tol=1.0e-04, sigma=0.5, host=85b04, nav=4, nbrs=2, l_surf_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.250 averaging target values for 5 iterations... 000: dt: 0.0000, sse=1098835.2, rms=3.985 rms = 4.49, time step reduction 1 of 3 to 0.250... 062: dt: 0.2500, sse=1044425.1, rms=3.657 (8.220%) 063: dt: 0.2500, sse=1022594.2, rms=3.523 (3.679%) rms = 3.48, time step reduction 2 of 3 to 0.125... 064: dt: 0.2500, sse=1015226.1, rms=3.483 (1.115%) 065: dt: 0.1250, sse=996664.2, rms=3.353 (3.743%) rms = 3.32, time step reduction 3 of 3 to 0.062... 066: dt: 0.1250, sse=991266.6, rms=3.317 (1.064%) positioning took 0.6 minutes mean border=65.0, 3435 (70) missing vertices, mean dist 0.1 [0.2 (%46.2)->0.3 (%53.8))] %57 local maxima, %15 large gradients and %18 min vals, 200 gradients ignored tol=1.0e-04, sigma=0.2, host=85b04, nav=2, nbrs=2, l_surf_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 writing pial surface to /output/january_2021/subject1/surf/lh.pial... writing smoothed curvature to lh.curv.pial 000: dt: 0.0000, sse=1013412.9, rms=3.433 rms = 3.85, time step reduction 1 of 3 to 0.250... 067: dt: 0.2500, sse=990893.1, rms=3.278 (4.518%) 068: dt: 0.2500, sse=978898.1, rms=3.205 (2.231%) rms = 3.20, time step reduction 2 of 3 to 0.125... 069: dt: 0.2500, sse=976514.8, rms=3.196 (0.294%) 070: dt: 0.1250, sse=961537.9, rms=3.084 (3.481%) rms = 3.06, time step reduction 3 of 3 to 0.062... 071: dt: 0.1250, sse=957701.4, rms=3.058 (0.842%) positioning took 0.6 minutes writing curvature file /output/january_2021/subject1/surf/lh.curv.pial writing smoothed area to lh.area.pial writing curvature file /output/january_2021/subject1/surf/lh.area.pial vertex spacing 0.99 +- 0.45 (0.05-->10.96) (max @ vno 115952 --> 116177) face area 0.39 +- 0.37 (0.00-->31.10) measuring cortical thickness... writing cortical thickness estimate to 'thickness' file. 0 of 117888 vertices processed 25000 of 117888 vertices processed 50000 of 117888 vertices processed 75000 of 117888 vertices processed 100000 of 117888 vertices processed 0 of 117888 vertices processed 25000 of 117888 vertices processed 50000 of 117888 vertices processed 75000 of 117888 vertices processed 100000 of 117888 vertices processed thickness calculation complete, 1069:3855 truncations. 27628 vertices at 0 distance 82130 vertices at 1 distance 65220 vertices at 2 distance 28345 vertices at 3 distance 10540 vertices at 4 distance 3853 vertices at 5 distance 1541 vertices at 6 distance 673 vertices at 7 distance 300 vertices at 8 distance 166 vertices at 9 distance 80 vertices at 10 distance 72 vertices at 11 distance 41 vertices at 12 distance 45 vertices at 13 distance 19 vertices at 14 distance 9 vertices at 15 distance 5 vertices at 16 distance 3 vertices at 17 distance 13 vertices at 18 distance 12 vertices at 19 distance 23 vertices at 20 distance writing curvature file /output/january_2021/subject1/surf/lh.thickness positioning took 13.3 minutes mris_make_surfaces -orig_white white.preaparc -orig_pial white.preaparc -aseg ../mri/aseg.presurf -mgz -T1 brain.finalsurfs subject1 rh using white.preaparc starting white location... using white.preaparc starting pial locations... using aseg volume ../mri/aseg.presurf to prevent surfaces crossing the midline INFO: assuming MGZ format for volumes. using brain.finalsurfs as T1 volume... $Id: mris_make_surfaces.c,v 1.164.2.4 2016/12/13 22:26:32 zkaufman Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading volume /output/january_2021/subject1/mri/filled.mgz... reading volume /output/january_2021/subject1/mri/brain.finalsurfs.mgz... reading volume /output/january_2021/subject1/mri/../mri/aseg.presurf.mgz... reading volume /output/january_2021/subject1/mri/wm.mgz... 21472 bright wm thresholded. 1554 bright non-wm voxels segmented. reading original surface position from /output/january_2021/subject1/surf/rh.orig... computing class statistics... border white: 265829 voxels (1.58%) border gray 271496 voxels (1.62%) WM (100.0): 99.8 +- 6.8 [70.0 --> 110.0] GM (84.0) : 80.7 +- 13.1 [30.0 --> 110.0] setting MIN_GRAY_AT_WHITE_BORDER to 71.9 (was 70) setting MAX_BORDER_WHITE to 108.8 (was 105) setting MIN_BORDER_WHITE to 85.0 (was 85) setting MAX_CSF to 58.9 (was 40) setting MAX_GRAY to 95.2 (was 95) setting MAX_GRAY_AT_CSF_BORDER to 71.9 (was 75) setting MIN_GRAY_AT_CSF_BORDER to 45.8 (was 40) using class modes intead of means, discounting robust sigmas.... intensity peaks found at WM=102+-5.2, GM=85+-7.8 mean inside = 95.7, mean outside = 84.3 smoothing surface for 5 iterations... reading initial white vertex positions from white.preaparc... reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) repositioning cortical surface to gray/white boundary smoothing T1 volume with sigma = 2.000 vertex spacing 0.87 +- 0.32 (0.03-->11.77) (max @ vno 118519 --> 118654) face area 0.32 +- 0.22 (0.00-->17.19) mean absolute distance = 0.96 +- 1.22 4203 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... inhibiting deformation at non-cortical midline structures... deleting segment 0 with 20 points - only 0.00% unknown deleting segment 1 with 6 points - only 0.00% unknown deleting segment 2 with 16 points - only 0.00% unknown deleting segment 3 with 28 points - only 0.00% unknown deleting segment 4 with 16 points - only 0.00% unknown deleting segment 5 with 109 points - only 0.00% unknown removing 2 vertex label from ripped group deleting segment 6 with 2 points - only 0.00% unknown removing 1 vertex label from ripped group deleting segment 7 with 1 points - only 0.00% unknown deleting segment 8 with 114 points - only 0.00% unknown deleting segment 10 with 14 points - only 0.00% unknown deleting segment 11 with 356 points - only 0.00% unknown mean border=92.4, 1376 (1359) missing vertices, mean dist 0.3 [1.8 (%19.2)->0.8 (%80.8))] %37 local maxima, %56 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=2.0, host=85b04, nav=4, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 complete_dist_mat 0 rms 0 smooth_averages 0 remove_neg 0 ico_order 0 which_surface 0 target_radius 0.000000 nfields 0 scale 0.000000 desired_rms_height 0.000000 momentum 0.000000 nbhd_size 0 max_nbrs 0 niterations 25 nsurfaces 0 SURFACES 3 flags 0 (0) use curv 0 no sulc 0 no rigid align 0 mris->nsize 2 mris->hemisphere 1 randomSeed 0 smoothing T1 volume with sigma = 1.000 vertex spacing 0.89 +- 0.30 (0.06-->12.55) (max @ vno 118654 --> 118519) face area 0.32 +- 0.21 (0.00-->17.53) mean absolute distance = 0.61 +- 1.05 5186 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=1183823.4, rms=5.254 001: dt: 0.5000, sse=868021.6, rms=3.586 (31.746%) 002: dt: 0.5000, sse=731694.1, rms=2.723 (24.074%) 003: dt: 0.5000, sse=694001.2, rms=2.371 (12.912%) 004: dt: 0.5000, sse=679649.2, rms=2.189 (7.669%) 005: dt: 0.5000, sse=668637.1, rms=2.114 (3.419%) 006: dt: 0.5000, sse=657384.4, rms=2.051 (3.012%) rms = 2.04, time step reduction 1 of 3 to 0.250... 007: dt: 0.5000, sse=685337.2, rms=2.040 (0.534%) 008: dt: 0.2500, sse=634672.8, rms=1.759 (13.761%) rms = 1.71, time step reduction 2 of 3 to 0.125... 009: dt: 0.2500, sse=632522.7, rms=1.712 (2.687%) rms = 1.69, time step reduction 3 of 3 to 0.062... 010: dt: 0.1250, sse=629407.3, rms=1.693 (1.126%) positioning took 0.8 minutes inhibiting deformation at non-cortical midline structures... removing 1 vertex label from ripped group deleting segment 0 with 1 points - only 0.00% unknown deleting segment 1 with 20 points - only 0.00% unknown removing 4 vertex label from ripped group deleting segment 2 with 4 points - only 0.00% unknown deleting segment 3 with 12 points - only 0.00% unknown deleting segment 4 with 34 points - only 0.00% unknown removing 3 vertex label from ripped group deleting segment 5 with 3 points - only 0.00% unknown deleting segment 6 with 119 points - only 0.00% unknown removing 2 vertex label from ripped group deleting segment 7 with 2 points - only 0.00% unknown deleting segment 8 with 7 points - only 28.57% unknown deleting segment 9 with 133 points - only 0.00% unknown deleting segment 10 with 30 points - only 0.00% unknown deleting segment 11 with 29 points - only 0.00% unknown deleting segment 12 with 271 points - only 0.00% unknown removing 1 vertex label from ripped group deleting segment 13 with 1 points - only 0.00% unknown mean border=93.2, 1355 (983) missing vertices, mean dist -0.3 [0.9 (%48.8)->0.3 (%51.2))] %43 local maxima, %49 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=1.0, host=85b04, nav=2, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.500 vertex spacing 0.88 +- 0.30 (0.05-->12.80) (max @ vno 118654 --> 118519) face area 0.33 +- 0.23 (0.00-->18.34) mean absolute distance = 0.58 +- 0.71 3448 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=759178.2, rms=2.743 011: dt: 0.5000, sse=709142.0, rms=2.130 (22.359%) 012: dt: 0.5000, sse=689887.8, rms=1.936 (9.088%) rms = 1.92, time step reduction 1 of 3 to 0.250... 013: dt: 0.5000, sse=680614.0, rms=1.924 (0.623%) 014: dt: 0.2500, sse=655909.9, rms=1.735 (9.802%) rms = 1.70, time step reduction 2 of 3 to 0.125... 015: dt: 0.2500, sse=657379.3, rms=1.703 (1.842%) rms = 1.69, time step reduction 3 of 3 to 0.062... 016: dt: 0.1250, sse=658330.8, rms=1.689 (0.870%) positioning took 0.5 minutes inhibiting deformation at non-cortical midline structures... removing 1 vertex label from ripped group deleting segment 0 with 1 points - only 0.00% unknown deleting segment 1 with 10 points - only 0.00% unknown deleting segment 2 with 23 points - only 0.00% unknown deleting segment 3 with 17 points - only 0.00% unknown deleting segment 4 with 34 points - only 0.00% unknown removing 2 vertex label from ripped group deleting segment 5 with 2 points - only 0.00% unknown deleting segment 6 with 120 points - only 0.00% unknown removing 2 vertex label from ripped group deleting segment 7 with 2 points - only 0.00% unknown removing 4 vertex label from ripped group deleting segment 8 with 4 points - only 0.00% unknown deleting segment 9 with 137 points - only 0.00% unknown deleting segment 10 with 29 points - only 0.00% unknown removing 2 vertex label from ripped group deleting segment 12 with 292 points - only 0.00% unknown removing 3 vertex label from ripped group deleting segment 13 with 3 points - only 0.00% unknown mean border=95.2, 1406 (881) missing vertices, mean dist -0.4 [0.7 (%65.0)->0.3 (%35.0))] %66 local maxima, %26 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=0.5, host=85b04, nav=1, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.250 vertex spacing 0.87 +- 0.31 (0.02-->12.90) (max @ vno 118654 --> 118519) face area 0.33 +- 0.23 (0.00-->18.25) mean absolute distance = 0.42 +- 0.52 3339 vertices more than 2 sigmas from mean. averaging target values for 5 iterations... 000: dt: 0.0000, sse=841160.4, rms=3.385 017: dt: 0.5000, sse=728329.9, rms=2.336 (30.972%) 018: dt: 0.5000, sse=692354.8, rms=1.931 (17.354%) rms = 1.89, time step reduction 1 of 3 to 0.250... 019: dt: 0.5000, sse=676504.8, rms=1.887 (2.275%) 020: dt: 0.2500, sse=646454.4, rms=1.674 (11.279%) rms = 1.64, time step reduction 2 of 3 to 0.125... 021: dt: 0.2500, sse=658750.6, rms=1.640 (2.041%) rms = 1.62, time step reduction 3 of 3 to 0.062... 022: dt: 0.1250, sse=640157.9, rms=1.616 (1.474%) positioning took 0.5 minutes inhibiting deformation at non-cortical midline structures... removing 1 vertex label from ripped group deleting segment 0 with 1 points - only 0.00% unknown deleting segment 1 with 10 points - only 0.00% unknown deleting segment 2 with 21 points - only 0.00% unknown deleting segment 3 with 19 points - only 0.00% unknown deleting segment 4 with 36 points - only 0.00% unknown deleting segment 5 with 8 points - only 0.00% unknown deleting segment 6 with 123 points - only 0.00% unknown removing 2 vertex label from ripped group deleting segment 7 with 2 points - only 0.00% unknown deleting segment 8 with 126 points - only 0.00% unknown deleting segment 9 with 30 points - only 0.00% unknown deleting segment 10 with 29 points - only 0.00% unknown deleting segment 11 with 293 points - only 0.00% unknown removing 3 vertex label from ripped group deleting segment 12 with 3 points - only 0.00% unknown mean border=96.2, 1572 (826) missing vertices, mean dist -0.2 [0.5 (%59.7)->0.3 (%40.3))] %77 local maxima, %16 large gradients and % 0 min vals, 0 gradients ignored tol=1.0e-04, sigma=0.2, host=85b04, nav=0, nbrs=2, l_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 writing white matter surface to /output/january_2021/subject1/surf/rh.white... writing smoothed curvature to rh.curv 000: dt: 0.0000, sse=681217.2, rms=2.234 023: dt: 0.5000, sse=672469.6, rms=1.627 (27.174%) rms = 1.67, time step reduction 1 of 3 to 0.250... 024: dt: 0.2500, sse=629990.4, rms=1.538 (5.442%) rms = 1.53, time step reduction 2 of 3 to 0.125... 025: dt: 0.2500, sse=633518.2, rms=1.526 (0.827%) rms = 1.48, time step reduction 3 of 3 to 0.062... 026: dt: 0.1250, sse=628796.7, rms=1.478 (3.158%) positioning took 0.4 minutes generating cortex label... 19 non-cortical segments detected only using segment with 10486 vertices erasing segment 0 (vno[0] = 22073) erasing segment 1 (vno[0] = 23914) erasing segment 2 (vno[0] = 25594) erasing segment 3 (vno[0] = 33241) erasing segment 5 (vno[0] = 44193) erasing segment 6 (vno[0] = 46023) erasing segment 7 (vno[0] = 49356) erasing segment 8 (vno[0] = 51183) erasing segment 9 (vno[0] = 53189) erasing segment 10 (vno[0] = 53912) erasing segment 11 (vno[0] = 61141) erasing segment 12 (vno[0] = 63684) erasing segment 13 (vno[0] = 66169) erasing segment 14 (vno[0] = 66193) erasing segment 15 (vno[0] = 77488) erasing segment 16 (vno[0] = 82183) erasing segment 17 (vno[0] = 85808) erasing segment 18 (vno[0] = 88830) writing cortex label to /output/january_2021/subject1/label/rh.cortex.label... writing curvature file /output/january_2021/subject1/surf/rh.curv writing smoothed area to rh.area writing curvature file /output/january_2021/subject1/surf/rh.area vertex spacing 0.87 +- 0.32 (0.03-->12.94) (max @ vno 118519 --> 118654) face area 0.32 +- 0.23 (0.00-->17.74) repositioning cortical surface to gray/csf boundary. smoothing T1 volume with sigma = 2.000 averaging target values for 5 iterations... inhibiting deformation at non-cortical midline structures... deleting segment 0 with 30 points - only 0.00% unknown deleting segment 1 with 10 points - only 0.00% unknown deleting segment 2 with 127 points - only 0.00% unknown deleting segment 3 with 128 points - only 0.00% unknown deleting segment 4 with 8 points - only 0.00% unknown removing 1 vertex label from ripped group deleting segment 5 with 1 points - only 0.00% unknown deleting segment 6 with 24 points - only 0.00% unknown removing 2 vertex label from ripped group deleting segment 8 with 2 points - only 0.00% unknown deleting segment 9 with 28 points - only 0.00% unknown deleting segment 12 with 50 points - only 0.00% unknown removing 4 vertex label from ripped group removing 2 vertex label from ripped group smoothing surface for 5 iterations... reading initial pial vertex positions from white.preaparc... mean border=68.7, 525 (525) missing vertices, mean dist 2.0 [1.9 (%0.2)->2.8 (%99.8))] %26 local maxima, %39 large gradients and %28 min vals, 146 gradients ignored perforing initial smooth deformation to move away from white surface tol=1.0e-04, sigma=2.0, host=85b04, nav=16, nbrs=2, l_surf_repulse=1.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.05 000: dt: 0.0000, sse=18367574.0, rms=28.214 001: dt: 0.0500, sse=17112004.0, rms=27.202 (3.586%) 002: dt: 0.0500, sse=16212078.0, rms=26.453 (2.755%) 003: dt: 0.0500, sse=15510584.0, rms=25.853 (2.265%) 004: dt: 0.0500, sse=14928755.0, rms=25.346 (1.964%) 005: dt: 0.0500, sse=14424261.0, rms=24.897 (1.771%) 006: dt: 0.0500, sse=13973939.0, rms=24.489 (1.637%) 007: dt: 0.0500, sse=13562607.0, rms=24.111 (1.545%) 008: dt: 0.0500, sse=13179749.0, rms=23.753 (1.483%) 009: dt: 0.0500, sse=12819082.0, rms=23.411 (1.439%) 010: dt: 0.0500, sse=12475794.0, rms=23.081 (1.410%) positioning took 0.8 minutes mean border=68.4, 366 (255) missing vertices, mean dist 1.6 [1.0 (%0.4)->2.2 (%99.6))] %27 local maxima, %39 large gradients and %27 min vals, 130 gradients ignored tol=1.0e-04, sigma=2.0, host=85b04, nav=16, nbrs=2, l_surf_repulse=1.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.05 000: dt: 0.0000, sse=13462023.0, rms=23.989 011: dt: 0.0500, sse=13129728.0, rms=23.678 (1.296%) 012: dt: 0.0500, sse=12809133.0, rms=23.374 (1.284%) 013: dt: 0.0500, sse=12498675.0, rms=23.076 (1.276%) 014: dt: 0.0500, sse=12196859.0, rms=22.782 (1.273%) 015: dt: 0.0500, sse=11902992.0, rms=22.493 (1.272%) 016: dt: 0.0500, sse=11616785.0, rms=22.207 (1.271%) 017: dt: 0.0500, sse=11337625.0, rms=21.924 (1.272%) 018: dt: 0.0500, sse=11064892.0, rms=21.645 (1.275%) 019: dt: 0.0500, sse=10797877.0, rms=21.368 (1.281%) 020: dt: 0.0500, sse=10536871.0, rms=21.093 (1.285%) positioning took 0.8 minutes mean border=68.2, 357 (183) missing vertices, mean dist 1.3 [0.3 (%1.3)->1.9 (%98.7))] %28 local maxima, %39 large gradients and %26 min vals, 132 gradients ignored tol=1.0e-04, sigma=2.0, host=85b04, nav=16, nbrs=2, l_surf_repulse=1.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.05 000: dt: 0.0000, sse=10681800.0, rms=21.240 021: dt: 0.0500, sse=10418199.0, rms=20.961 (1.313%) 022: dt: 0.0500, sse=10160701.0, rms=20.685 (1.317%) 023: dt: 0.0500, sse=9907001.0, rms=20.410 (1.333%) 024: dt: 0.0500, sse=9659536.0, rms=20.137 (1.335%) 025: dt: 0.0500, sse=9418437.0, rms=19.868 (1.337%) 026: dt: 0.0500, sse=9182752.0, rms=19.601 (1.343%) 027: dt: 0.0500, sse=8950297.0, rms=19.334 (1.361%) 028: dt: 0.0500, sse=8719240.0, rms=19.066 (1.390%) 029: dt: 0.0500, sse=8490441.0, rms=18.796 (1.416%) 030: dt: 0.0500, sse=8263580.5, rms=18.524 (1.445%) positioning took 0.7 minutes mean border=68.1, 434 (144) missing vertices, mean dist 1.1 [0.1 (%8.4)->1.7 (%91.6))] %28 local maxima, %39 large gradients and %26 min vals, 135 gradients ignored tol=1.0e-04, sigma=2.0, host=85b04, nav=16, nbrs=2, l_surf_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 1.000 averaging target values for 5 iterations... 000: dt: 0.0000, sse=8358070.5, rms=18.630 031: dt: 0.5000, sse=6634877.0, rms=16.438 (11.763%) 032: dt: 0.5000, sse=5149950.5, rms=14.277 (13.149%) 033: dt: 0.5000, sse=3941582.5, rms=12.246 (14.222%) 034: dt: 0.5000, sse=3020829.8, rms=10.429 (14.841%) 035: dt: 0.5000, sse=2420755.0, rms=9.055 (13.172%) 036: dt: 0.5000, sse=2041018.1, rms=8.058 (11.018%) 037: dt: 0.5000, sse=1840346.6, rms=7.482 (7.146%) 038: dt: 0.5000, sse=1710802.4, rms=7.075 (5.432%) 039: dt: 0.5000, sse=1648302.6, rms=6.875 (2.831%) 040: dt: 0.5000, sse=1588019.6, rms=6.668 (3.017%) 041: dt: 0.5000, sse=1561599.5, rms=6.579 (1.325%) 042: dt: 0.5000, sse=1523863.0, rms=6.441 (2.105%) 043: dt: 0.5000, sse=1506976.1, rms=6.385 (0.863%) 044: dt: 0.5000, sse=1481051.0, rms=6.283 (1.594%) rms = 6.25, time step reduction 1 of 3 to 0.250... 045: dt: 0.5000, sse=1470883.2, rms=6.250 (0.529%) 046: dt: 0.2500, sse=1275594.0, rms=5.458 (12.676%) 047: dt: 0.2500, sse=1219574.8, rms=5.224 (4.292%) rms = 5.21, time step reduction 2 of 3 to 0.125... 048: dt: 0.2500, sse=1217675.8, rms=5.208 (0.300%) 049: dt: 0.1250, sse=1170176.1, rms=4.990 (4.179%) rms = 4.95, time step reduction 3 of 3 to 0.062... 050: dt: 0.1250, sse=1162123.4, rms=4.952 (0.761%) positioning took 1.9 minutes mean border=66.6, 2444 (90) missing vertices, mean dist 0.2 [0.2 (%40.8)->0.6 (%59.2))] %42 local maxima, %27 large gradients and %23 min vals, 131 gradients ignored tol=1.0e-04, sigma=1.0, host=85b04, nav=8, nbrs=2, l_surf_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.500 averaging target values for 5 iterations... 000: dt: 0.0000, sse=1406049.1, rms=5.516 rms = 5.57, time step reduction 1 of 3 to 0.250... 051: dt: 0.2500, sse=1265534.4, rms=4.900 (11.154%) 052: dt: 0.2500, sse=1160721.1, rms=4.386 (10.493%) 053: dt: 0.2500, sse=1123645.1, rms=4.196 (4.345%) 054: dt: 0.2500, sse=1099572.6, rms=4.067 (3.076%) 055: dt: 0.2500, sse=1086317.4, rms=3.995 (1.754%) 056: dt: 0.2500, sse=1074073.2, rms=3.926 (1.722%) rms = 3.90, time step reduction 2 of 3 to 0.125... 057: dt: 0.2500, sse=1068599.2, rms=3.896 (0.770%) 058: dt: 0.1250, sse=1021087.4, rms=3.597 (7.683%) 059: dt: 0.1250, sse=1011994.7, rms=3.539 (1.599%) rms = 3.52, time step reduction 3 of 3 to 0.062... 060: dt: 0.1250, sse=1008535.1, rms=3.517 (0.643%) positioning took 1.1 minutes mean border=65.9, 2667 (76) missing vertices, mean dist 0.1 [0.1 (%45.5)->0.4 (%54.5))] %51 local maxima, %18 large gradients and %22 min vals, 122 gradients ignored tol=1.0e-04, sigma=0.5, host=85b04, nav=4, nbrs=2, l_surf_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 smoothing T1 volume with sigma = 0.250 averaging target values for 5 iterations... 000: dt: 0.0000, sse=1070338.5, rms=3.891 rms = 4.47, time step reduction 1 of 3 to 0.250... 061: dt: 0.2500, sse=1021781.9, rms=3.598 (7.515%) 062: dt: 0.2500, sse=1005530.9, rms=3.503 (2.650%) rms = 3.49, time step reduction 2 of 3 to 0.125... 063: dt: 0.2500, sse=1002053.2, rms=3.487 (0.458%) 064: dt: 0.1250, sse=983912.4, rms=3.362 (3.577%) rms = 3.33, time step reduction 3 of 3 to 0.062... 065: dt: 0.1250, sse=978601.2, rms=3.328 (1.012%) positioning took 0.6 minutes mean border=65.3, 3989 (74) missing vertices, mean dist 0.1 [0.1 (%47.5)->0.3 (%52.5))] %53 local maxima, %15 large gradients and %21 min vals, 153 gradients ignored tol=1.0e-04, sigma=0.2, host=85b04, nav=2, nbrs=2, l_surf_repulse=5.000, l_tspring=1.000, l_nspring=0.500, l_intensity=0.200, l_curv=1.000 mom=0.00, dt=0.50 writing pial surface to /output/january_2021/subject1/surf/rh.pial... writing smoothed curvature to rh.curv.pial 000: dt: 0.0000, sse=1000585.0, rms=3.437 rms = 3.91, time step reduction 1 of 3 to 0.250... 066: dt: 0.2500, sse=978925.9, rms=3.291 (4.236%) 067: dt: 0.2500, sse=968417.6, rms=3.231 (1.816%) rms = 3.23, time step reduction 2 of 3 to 0.125... rms = 3.20, time step reduction 3 of 3 to 0.062... 068: dt: 0.1250, sse=964832.6, rms=3.204 (0.846%) positioning took 0.5 minutes writing curvature file /output/january_2021/subject1/surf/rh.curv.pial writing smoothed area to rh.area.pial writing curvature file /output/january_2021/subject1/surf/rh.area.pial vertex spacing 0.97 +- 0.44 (0.07-->13.49) (max @ vno 118654 --> 118519) face area 0.38 +- 0.35 (0.00-->24.78) measuring cortical thickness... writing cortical thickness estimate to 'thickness' file. 0 of 120537 vertices processed 25000 of 120537 vertices processed 50000 of 120537 vertices processed 75000 of 120537 vertices processed 100000 of 120537 vertices processed 0 of 120537 vertices processed 25000 of 120537 vertices processed 50000 of 120537 vertices processed 75000 of 120537 vertices processed 100000 of 120537 vertices processed thickness calculation complete, 510:2087 truncations. 34693 vertices at 0 distance 89752 vertices at 1 distance 61706 vertices at 2 distance 23981 vertices at 3 distance 8734 vertices at 4 distance 3223 vertices at 5 distance 1292 vertices at 6 distance 568 vertices at 7 distance 256 vertices at 8 distance 118 vertices at 9 distance 98 vertices at 10 distance 74 vertices at 11 distance 55 vertices at 12 distance 52 vertices at 13 distance 54 vertices at 14 distance 30 vertices at 15 distance 20 vertices at 16 distance 14 vertices at 17 distance 14 vertices at 18 distance 12 vertices at 19 distance 8 vertices at 20 distance writing curvature file /output/january_2021/subject1/surf/rh.thickness positioning took 12.1 minutes PIDs (78462 78465) completed and logs appended. #-------------------------------------------- #@# Surf Volume lh Thu Feb 11 01:56:01 UTC 2021 /output/january_2021/subject1/surf /output/january_2021/subject1/surf mris_calc -o lh.area.mid lh.area add lh.area.pial Saving result to 'lh.area.mid' (type = MRI_CURV_FILE) [ ok ] mris_calc -o lh.area.mid lh.area.mid div 2 Saving result to 'lh.area.mid' (type = MRI_CURV_FILE) [ ok ] mris_convert --volume subject1 lh /output/january_2021/subject1/surf/lh.volume masking with /output/january_2021/subject1/label/lh.cortex.label Total face volume 199536 Total vertex volume 195611 (mask=0) #@# subject1 lh 195611 vertexvol Done #-------------------------------------------- #@# Surf Volume rh Thu Feb 11 01:56:04 UTC 2021 /output/january_2021/subject1/surf /output/january_2021/subject1/surf mris_calc -o rh.area.mid rh.area add rh.area.pial Saving result to 'rh.area.mid' (type = MRI_CURV_FILE) [ ok ] mris_calc -o rh.area.mid rh.area.mid div 2 Saving result to 'rh.area.mid' (type = MRI_CURV_FILE) [ ok ] mris_convert --volume subject1 rh /output/january_2021/subject1/surf/rh.volume masking with /output/january_2021/subject1/label/rh.cortex.label Total face volume 184675 Total vertex volume 179898 (mask=0) #@# subject1 rh 179898 vertexvol Done #-------------------------------------------- #@# Cortical ribbon mask Thu Feb 11 01:56:07 UTC 2021 /output/january_2021/subject1/mri mris_volmask --aseg_name aseg.presurf --label_left_white 2 --label_left_ribbon 3 --label_right_white 41 --label_right_ribbon 42 --save_ribbon subject1 SUBJECTS_DIR is /output/january_2021 loading input data... computing distance to left white surface computing distance to left pial surface computing distance to right white surface computing distance to right pial surface hemi masks overlap voxels = 25 writing volume /output/january_2021/subject1/mri/ribbon.mgz mris_volmask took 7.88 minutes writing ribbon files #----------------------------------------- #@# Parcellation Stats lh Thu Feb 11 02:04:00 UTC 2021 /output/january_2021/subject1/scripts mris_anatomical_stats -th3 -mgz -cortex ../label/lh.cortex.label -f ../stats/lh.aparc.stats -b -a ../label/lh.aparc.annot -c ../label/aparc.annot.ctab subject1 lh white mris_anatomical_stats -th3 -mgz -cortex ../label/lh.cortex.label -f ../stats/lh.aparc.pial.stats -b -a ../label/lh.aparc.annot -c ../label/aparc.annot.ctab subject1 lh pial #----------------------------------------- #@# Parcellation Stats rh Thu Feb 11 02:04:00 UTC 2021 /output/january_2021/subject1/scripts mris_anatomical_stats -th3 -mgz -cortex ../label/rh.cortex.label -f ../stats/rh.aparc.stats -b -a ../label/rh.aparc.annot -c ../label/aparc.annot.ctab subject1 rh white mris_anatomical_stats -th3 -mgz -cortex ../label/rh.cortex.label -f ../stats/rh.aparc.pial.stats -b -a ../label/rh.aparc.annot -c ../label/aparc.annot.ctab subject1 rh pial Waiting for PID 80999 of (80999 81002 81005 81008) to complete... Waiting for PID 81002 of (80999 81002 81005 81008) to complete... Waiting for PID 81005 of (80999 81002 81005 81008) to complete... Waiting for PID 81008 of (80999 81002 81005 81008) to complete... mris_anatomical_stats -th3 -mgz -cortex ../label/lh.cortex.label -f ../stats/lh.aparc.stats -b -a ../label/lh.aparc.annot -c ../label/aparc.annot.ctab subject1 lh white computing statistics for each annotation in ../label/lh.aparc.annot. reading volume /output/january_2021/subject1/mri/wm.mgz... reading input surface /output/january_2021/subject1/surf/lh.white... reading input pial surface /output/january_2021/subject1/surf/lh.pial... reading input white surface /output/january_2021/subject1/surf/lh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. INFO: using ../label/lh.cortex.label as mask to calc cortex NumVert, SurfArea and MeanThickness. Using TH3 vertex volume calc Total face volume 199536 Total vertex volume 195611 (mask=0) reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Saving annotation colortable ../label/aparc.annot.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1642668 mm^3 (det: 1.185940 ) lhCtxGM: 190427.402 189675.000 diff= 752.4 pctdiff= 0.395 rhCtxGM: 178076.111 177439.000 diff= 637.1 pctdiff= 0.358 lhCtxWM: 199404.964 197470.500 diff= 1934.5 pctdiff= 0.970 rhCtxWM: 207751.351 212450.500 diff=-4699.1 pctdiff=-2.262 SubCortGMVol 61310.000 SupraTentVol 874938.828 (868100.000) diff=6838.828 pctdiff=0.782 SupraTentVolNotVent 845218.828 (838380.000) diff=6838.828 pctdiff=0.809 BrainSegVol 1025362.000 (1021360.000) diff=4002.000 pctdiff=0.390 BrainSegVolNotVent 989963.000 (988494.828) diff=1468.172 pctdiff=0.148 BrainSegVolNotVent 989963.000 CerebellumVol 151490.000 VentChorVol 29720.000 3rd4th5thCSF 5679.000 CSFVol 1677.000, OptChiasmVol 93.000 MaskVol 1624348.000 756 490 1818 2.854 0.991 0.153 0.072 13 2.3 bankssts 803 520 1414 2.665 0.591 0.125 0.026 11 1.0 caudalanteriorcingulate 3577 2231 5746 2.522 0.396 0.127 0.029 41 4.5 caudalmiddlefrontal 1197 798 1809 2.105 0.536 0.135 0.034 12 2.0 cuneus 682 434 2394 3.200 0.973 0.142 0.057 13 1.6 entorhinal 4745 3268 10689 2.499 0.912 0.151 0.059 96 12.5 fusiform 4209 2582 6915 2.338 0.636 0.123 0.035 54 6.8 inferiorparietal 4964 3360 9228 2.252 0.715 0.155 0.052 92 11.3 inferiortemporal 1930 1087 2484 2.005 1.006 0.144 0.059 42 4.7 isthmuscingulate 5272 3669 7369 1.874 0.562 0.152 0.048 85 11.6 lateraloccipital 3746 2387 6857 2.718 0.681 0.132 0.037 44 5.5 lateralorbitofrontal 1705 1419 2871 2.050 0.654 0.154 0.050 33 4.0 lingual 2596 1622 4919 2.532 0.703 0.126 0.034 43 3.5 medialorbitofrontal 3574 2459 9886 2.767 0.929 0.147 0.064 76 10.8 middletemporal 514 305 912 2.170 0.899 0.137 0.050 8 1.0 parahippocampal 2603 1505 3995 2.463 0.498 0.108 0.026 19 3.1 paracentral 2277 1453 4257 2.559 0.543 0.122 0.031 27 2.7 parsopercularis 881 573 1830 2.747 0.443 0.148 0.039 13 1.3 parsorbitalis 1631 1079 2927 2.435 0.435 0.120 0.026 16 1.8 parstriangularis 1212 957 1983 2.058 0.660 0.172 0.053 24 3.0 pericalcarine 5679 3392 9114 2.395 0.832 0.113 0.031 51 7.9 postcentral 1387 940 2294 2.466 0.476 0.151 0.044 26 2.5 posteriorcingulate 5571 3333 9169 2.543 0.606 0.111 0.028 50 6.8 precentral 3827 2758 6210 2.252 0.530 0.152 0.045 52 7.9 precuneus 1058 677 1927 2.647 0.504 0.124 0.027 17 1.2 rostralanteriorcingulate 7433 4698 11771 2.304 0.432 0.137 0.036 107 10.3 rostralmiddlefrontal 11408 7085 19274 2.552 0.490 0.121 0.030 117 14.0 superiorfrontal 8277 5048 11333 2.102 0.539 0.113 0.026 78 9.4 superiorparietal 3288 2227 9019 3.136 1.077 0.134 0.061 71 8.7 superiortemporal 7845 4696 14732 2.622 0.935 0.117 0.034 88 10.8 supramarginal 279 173 592 2.621 0.420 0.147 0.045 4 0.5 frontalpole 640 453 2408 3.256 0.744 0.155 0.055 16 1.6 temporalpole 375 228 731 3.084 0.900 0.124 0.064 8 0.8 transversetemporal 2482 1829 6734 3.399 1.077 0.150 0.057 37 6.5 insula mris_anatomical_stats -th3 -mgz -cortex ../label/lh.cortex.label -f ../stats/lh.aparc.pial.stats -b -a ../label/lh.aparc.annot -c ../label/aparc.annot.ctab subject1 lh pial computing statistics for each annotation in ../label/lh.aparc.annot. reading volume /output/january_2021/subject1/mri/wm.mgz... reading input surface /output/january_2021/subject1/surf/lh.pial... reading input pial surface /output/january_2021/subject1/surf/lh.pial... reading input white surface /output/january_2021/subject1/surf/lh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. INFO: using ../label/lh.cortex.label as mask to calc cortex NumVert, SurfArea and MeanThickness. Using TH3 vertex volume calc Total face volume 199536 Total vertex volume 195611 (mask=0) reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Saving annotation colortable ../label/aparc.annot.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1642668 mm^3 (det: 1.185940 ) lhCtxGM: 190427.402 189675.000 diff= 752.4 pctdiff= 0.395 rhCtxGM: 178076.111 177439.000 diff= 637.1 pctdiff= 0.358 lhCtxWM: 199404.964 197470.500 diff= 1934.5 pctdiff= 0.970 rhCtxWM: 207751.351 212450.500 diff=-4699.1 pctdiff=-2.262 SubCortGMVol 61310.000 SupraTentVol 874938.828 (868100.000) diff=6838.828 pctdiff=0.782 SupraTentVolNotVent 845218.828 (838380.000) diff=6838.828 pctdiff=0.809 BrainSegVol 1025362.000 (1021360.000) diff=4002.000 pctdiff=0.390 BrainSegVolNotVent 989963.000 (988494.828) diff=1468.172 pctdiff=0.148 BrainSegVolNotVent 989963.000 CerebellumVol 151490.000 VentChorVol 29720.000 3rd4th5thCSF 5679.000 CSFVol 1677.000, OptChiasmVol 93.000 MaskVol 1624348.000 756 716 1818 2.854 0.991 0.221 0.117 41 4.7 bankssts 803 616 1414 2.665 0.591 0.106 0.015 6 0.5 caudalanteriorcingulate 3577 2351 5746 2.522 0.396 0.115 0.026 57 3.8 caudalmiddlefrontal 1197 901 1809 2.105 0.536 0.122 0.024 15 1.2 cuneus 682 955 2394 3.200 0.973 0.207 0.045 6 1.6 entorhinal 4745 4918 10689 2.499 0.912 0.188 0.049 81 11.4 fusiform 4209 3310 6915 2.338 0.636 0.137 0.032 122 6.2 inferiorparietal 4964 4730 9228 2.252 0.715 0.177 0.049 104 10.6 inferiortemporal 1930 1434 2484 2.005 1.006 0.156 0.056 47 4.0 isthmuscingulate 5272 4299 7369 1.874 0.562 0.140 0.036 119 8.8 lateraloccipital 3746 2565 6857 2.718 0.681 0.112 0.024 48 4.0 lateralorbitofrontal 1705 1566 2871 2.050 0.654 0.210 0.190 542 22.3 lingual 2596 2106 4919 2.532 0.703 0.127 0.024 30 2.6 medialorbitofrontal 3574 4406 9886 2.767 0.929 0.224 0.065 100 11.4 middletemporal 514 554 912 2.170 0.899 0.180 0.041 6 1.0 parahippocampal 2603 1755 3995 2.463 0.498 0.094 0.022 22 2.2 paracentral 2277 1856 4257 2.559 0.543 0.129 0.023 20 2.5 parsopercularis 881 750 1830 2.747 0.443 0.142 0.027 12 1.1 parsorbitalis 1631 1306 2927 2.435 0.435 0.132 0.021 19 1.5 parstriangularis 1212 896 1983 2.058 0.660 0.143 0.040 22 2.1 pericalcarine 5679 4186 9114 2.395 0.832 0.101 0.020 67 5.0 postcentral 1387 1005 2294 2.466 0.476 0.147 0.057 64 4.2 posteriorcingulate 5571 3735 9169 2.543 0.606 0.106 0.023 78 5.5 precentral 3827 2682 6210 2.252 0.530 0.121 0.033 65 6.4 precuneus 1058 823 1927 2.647 0.504 0.128 0.027 10 1.3 rostralanteriorcingulate 7433 5374 11771 2.304 0.432 0.136 0.031 101 10.2 rostralmiddlefrontal 11408 7897 19274 2.552 0.490 0.118 0.028 149 12.6 superiorfrontal 8277 5835 11333 2.102 0.539 0.109 0.022 82 7.6 superiorparietal 3288 3061 9019 3.136 1.077 0.185 0.065 91 9.0 superiortemporal 7845 6487 14732 2.622 0.935 0.140 0.031 103 11.1 supramarginal 279 267 592 2.621 0.420 0.175 0.035 4 0.4 frontalpole 640 951 2408 3.256 0.744 0.198 0.041 8 1.2 temporalpole 375 290 731 3.084 0.900 0.175 0.062 7 1.0 transversetemporal 2482 1921 6734 3.399 1.077 0.166 0.090 103 12.2 insula mris_anatomical_stats -th3 -mgz -cortex ../label/rh.cortex.label -f ../stats/rh.aparc.stats -b -a ../label/rh.aparc.annot -c ../label/aparc.annot.ctab subject1 rh white computing statistics for each annotation in ../label/rh.aparc.annot. reading volume /output/january_2021/subject1/mri/wm.mgz... reading input surface /output/january_2021/subject1/surf/rh.white... reading input pial surface /output/january_2021/subject1/surf/rh.pial... reading input white surface /output/january_2021/subject1/surf/rh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. INFO: using ../label/rh.cortex.label as mask to calc cortex NumVert, SurfArea and MeanThickness. Using TH3 vertex volume calc Total face volume 184675 Total vertex volume 179898 (mask=0) reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Saving annotation colortable ../label/aparc.annot.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1642668 mm^3 (det: 1.185940 ) lhCtxGM: 190427.402 189675.000 diff= 752.4 pctdiff= 0.395 rhCtxGM: 178076.111 177439.000 diff= 637.1 pctdiff= 0.358 lhCtxWM: 199404.964 197470.500 diff= 1934.5 pctdiff= 0.970 rhCtxWM: 207751.351 212450.500 diff=-4699.1 pctdiff=-2.262 SubCortGMVol 61310.000 SupraTentVol 874938.828 (868100.000) diff=6838.828 pctdiff=0.782 SupraTentVolNotVent 845218.828 (838380.000) diff=6838.828 pctdiff=0.809 BrainSegVol 1025362.000 (1021360.000) diff=4002.000 pctdiff=0.390 BrainSegVolNotVent 989963.000 (988494.828) diff=1468.172 pctdiff=0.148 BrainSegVolNotVent 989963.000 CerebellumVol 151490.000 VentChorVol 29720.000 3rd4th5thCSF 5679.000 CSFVol 1677.000, OptChiasmVol 93.000 MaskVol 1624348.000 635 389 1040 2.840 0.896 0.130 0.052 8 1.4 bankssts 1450 926 2545 2.504 0.518 0.102 0.026 15 1.2 caudalanteriorcingulate 1604 971 2445 2.271 0.452 0.112 0.024 17 1.6 caudalmiddlefrontal 2225 1425 2487 1.673 0.420 0.140 0.037 30 3.6 cuneus 181 87 153 1.513 0.597 0.143 0.072 5 0.7 entorhinal 1803 1264 3837 2.371 0.674 0.157 0.044 28 3.8 fusiform 9651 6159 17022 2.323 0.601 0.128 0.032 122 12.3 inferiorparietal 2529 1731 5653 2.405 0.951 0.157 0.062 49 7.4 inferiortemporal 1297 737 2141 2.325 1.189 0.143 0.062 23 3.4 isthmuscingulate 7583 4773 10895 2.059 0.695 0.147 0.048 122 15.1 lateraloccipital 3997 2554 7933 2.982 0.820 0.131 0.035 49 5.2 lateralorbitofrontal 1805 1486 4705 2.409 0.935 0.163 0.050 33 4.0 lingual 2780 1804 5355 2.582 0.579 0.136 0.034 49 3.5 medialorbitofrontal 2442 1468 5947 3.115 0.993 0.150 0.075 43 8.0 middletemporal 3212 1991 4639 2.388 0.635 0.118 0.035 34 5.1 paracentral 1181 663 1720 2.438 0.349 0.112 0.028 12 1.2 parsopercularis 1254 794 2459 2.733 0.464 0.150 0.038 18 1.9 parsorbitalis 1784 1109 2744 2.293 0.335 0.128 0.032 21 2.4 parstriangularis 1700 1312 2062 1.612 0.620 0.177 0.052 46 4.1 pericalcarine 6839 4227 10296 2.235 0.599 0.106 0.024 54 7.3 postcentral 2130 1300 3261 2.508 0.472 0.128 0.033 30 2.7 posteriorcingulate 7084 4272 10340 2.353 0.527 0.108 0.023 68 6.9 precentral 6335 3945 8788 2.194 0.563 0.132 0.039 88 11.5 precuneus 841 529 1621 2.876 0.511 0.127 0.031 14 1.0 rostralanteriorcingulate 7540 4871 11632 2.256 0.467 0.126 0.030 91 9.2 rostralmiddlefrontal 9341 5605 15660 2.580 0.483 0.115 0.027 97 10.3 superiorfrontal 11616 7268 14730 1.926 0.502 0.111 0.025 105 12.0 superiorparietal 1531 1204 4107 2.996 1.069 0.148 0.048 25 3.8 superiortemporal 4467 2879 6924 2.285 0.672 0.131 0.036 52 6.7 supramarginal 379 252 806 2.580 0.548 0.170 0.046 7 0.7 frontalpole 411 294 1324 3.053 0.675 0.170 0.080 7 1.4 temporalpole 95 71 198 2.906 0.829 0.110 0.023 0 0.1 transversetemporal 1642 1136 4247 2.906 0.995 0.143 0.050 25 3.4 insula mris_anatomical_stats -th3 -mgz -cortex ../label/rh.cortex.label -f ../stats/rh.aparc.pial.stats -b -a ../label/rh.aparc.annot -c ../label/aparc.annot.ctab subject1 rh pial computing statistics for each annotation in ../label/rh.aparc.annot. reading volume /output/january_2021/subject1/mri/wm.mgz... reading input surface /output/january_2021/subject1/surf/rh.pial... reading input pial surface /output/january_2021/subject1/surf/rh.pial... reading input white surface /output/january_2021/subject1/surf/rh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. INFO: using ../label/rh.cortex.label as mask to calc cortex NumVert, SurfArea and MeanThickness. Using TH3 vertex volume calc Total face volume 184675 Total vertex volume 179898 (mask=0) reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Saving annotation colortable ../label/aparc.annot.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1642668 mm^3 (det: 1.185940 ) lhCtxGM: 190427.402 189675.000 diff= 752.4 pctdiff= 0.395 rhCtxGM: 178076.111 177439.000 diff= 637.1 pctdiff= 0.358 lhCtxWM: 199404.964 197470.500 diff= 1934.5 pctdiff= 0.970 rhCtxWM: 207751.351 212450.500 diff=-4699.1 pctdiff=-2.262 SubCortGMVol 61310.000 SupraTentVol 874938.828 (868100.000) diff=6838.828 pctdiff=0.782 SupraTentVolNotVent 845218.828 (838380.000) diff=6838.828 pctdiff=0.809 BrainSegVol 1025362.000 (1021360.000) diff=4002.000 pctdiff=0.390 BrainSegVolNotVent 989963.000 (988494.828) diff=1468.172 pctdiff=0.148 BrainSegVolNotVent 989963.000 CerebellumVol 151490.000 VentChorVol 29720.000 3rd4th5thCSF 5679.000 CSFVol 1677.000, OptChiasmVol 93.000 MaskVol 1624348.000 635 343 1040 2.840 0.896 0.135 0.050 17 1.1 bankssts 1450 1095 2545 2.504 0.518 0.111 0.031 25 1.7 caudalanteriorcingulate 1604 1201 2445 2.271 0.452 0.119 0.018 14 1.3 caudalmiddlefrontal 2225 1668 2487 1.673 0.420 0.122 0.028 25 2.5 cuneus 181 132 153 1.513 0.597 0.136 0.046 2 0.4 entorhinal 1803 2081 3837 2.371 0.674 0.192 0.042 23 3.8 fusiform 9651 8070 17022 2.323 0.601 0.136 0.026 109 11.4 inferiorparietal 2529 2831 5653 2.405 0.951 0.197 0.055 55 6.3 inferiortemporal 1297 1070 2141 2.325 1.189 0.209 0.112 52 8.9 isthmuscingulate 7583 5917 10895 2.059 0.695 0.143 0.039 146 12.9 lateraloccipital 3997 2785 7933 2.982 0.820 0.123 0.068 119 15.6 lateralorbitofrontal 1805 2400 4705 2.409 0.935 0.216 0.055 31 4.5 lingual 2780 2237 5355 2.582 0.579 0.131 0.027 34 2.9 medialorbitofrontal 2442 2216 5947 3.115 0.993 0.195 0.075 82 6.6 middletemporal 3212 1986 4639 2.388 0.635 0.091 0.027 47 3.8 paracentral 1181 755 1720 2.438 0.349 0.112 0.024 13 1.2 parsopercularis 1254 1005 2459 2.733 0.464 0.144 0.026 14 1.4 parsorbitalis 1784 1317 2744 2.293 0.335 0.128 0.025 17 2.0 parstriangularis 1700 1312 2062 1.612 0.620 0.167 0.098 199 10.5 pericalcarine 6839 4986 10296 2.235 0.599 0.097 0.017 51 5.0 postcentral 2130 1339 3261 2.508 0.472 0.118 0.027 54 2.5 posteriorcingulate 7084 4612 10340 2.353 0.527 0.099 0.020 85 6.2 precentral 6335 4113 8788 2.194 0.563 0.112 0.029 84 7.9 precuneus 841 650 1621 2.876 0.511 0.137 0.030 14 1.1 rostralanteriorcingulate 7540 5473 11632 2.256 0.467 0.124 0.024 80 7.8 rostralmiddlefrontal 9341 6539 15660 2.580 0.483 0.114 0.023 96 9.1 superiorfrontal 11616 8224 14730 1.926 0.502 0.106 0.021 150 10.7 superiorparietal 1531 1330 4107 2.996 1.069 0.200 0.186 1264 11.8 superiortemporal 4467 3137 6924 2.285 0.672 0.122 0.027 58 4.8 supramarginal 379 355 806 2.580 0.548 0.170 0.035 5 0.7 frontalpole 411 615 1324 3.053 0.675 0.269 0.062 7 1.3 temporalpole 95 70 198 2.906 0.829 0.174 0.040 2 0.1 transversetemporal 1642 1498 4247 2.906 0.995 0.176 0.042 36 3.3 insula PIDs (80999 81002 81005 81008) completed and logs appended. #----------------------------------------- #@# Cortical Parc 2 lh Thu Feb 11 02:04:33 UTC 2021 /output/january_2021/subject1/scripts mris_ca_label -l ../label/lh.cortex.label -aseg ../mri/aseg.presurf.mgz -seed 1234 subject1 lh ../surf/lh.sphere.reg /opt/freesurfer/average/lh.CDaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ../label/lh.aparc.a2009s.annot #----------------------------------------- #@# Cortical Parc 2 rh Thu Feb 11 02:04:33 UTC 2021 /output/january_2021/subject1/scripts mris_ca_label -l ../label/rh.cortex.label -aseg ../mri/aseg.presurf.mgz -seed 1234 subject1 rh ../surf/rh.sphere.reg /opt/freesurfer/average/rh.CDaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ../label/rh.aparc.a2009s.annot Waiting for PID 81125 of (81125 81128) to complete... Waiting for PID 81128 of (81125 81128) to complete... mris_ca_label -l ../label/lh.cortex.label -aseg ../mri/aseg.presurf.mgz -seed 1234 subject1 lh ../surf/lh.sphere.reg /opt/freesurfer/average/lh.CDaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ../label/lh.aparc.a2009s.annot setting seed for random number generator to 1234 using ../mri/aseg.presurf.mgz aseg volume to correct midline $Id: mris_ca_label.c,v 1.37 2014/02/04 17:46:42 fischl Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading atlas from /opt/freesurfer/average/lh.CDaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs... reading color table from GCSA file.... average std = 2.9 using min determinant for regularization = 0.086 0 singular and 762 ill-conditioned covariance matrices regularized input 0: MEAN CURVATURE, flags 0, avgs 5, name mean_curvature labeling surface... 153 labels changed using aseg relabeling using gibbs priors... 000: 7854 changed, 117888 examined... 001: 1816 changed, 30836 examined... 002: 486 changed, 9674 examined... 003: 204 changed, 2890 examined... 004: 75 changed, 1161 examined... 005: 37 changed, 427 examined... 006: 14 changed, 209 examined... 007: 10 changed, 90 examined... 008: 3 changed, 57 examined... 009: 0 changed, 15 examined... 27 labels changed using aseg 000: 265 total segments, 174 labels (2204 vertices) changed 001: 103 total segments, 14 labels (94 vertices) changed 002: 89 total segments, 0 labels (0 vertices) changed 10 filter iterations complete (10 requested, 51 changed) rationalizing unknown annotations with cortex label relabeling Medial_wall label... 873 vertices marked for relabeling... 873 labels changed in reclassification. writing output to ../label/lh.aparc.a2009s.annot... classification took 0 minutes and 17 seconds. mris_ca_label -l ../label/rh.cortex.label -aseg ../mri/aseg.presurf.mgz -seed 1234 subject1 rh ../surf/rh.sphere.reg /opt/freesurfer/average/rh.CDaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ../label/rh.aparc.a2009s.annot setting seed for random number generator to 1234 using ../mri/aseg.presurf.mgz aseg volume to correct midline $Id: mris_ca_label.c,v 1.37 2014/02/04 17:46:42 fischl Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading atlas from /opt/freesurfer/average/rh.CDaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs... reading color table from GCSA file.... average std = 1.4 using min determinant for regularization = 0.020 0 singular and 719 ill-conditioned covariance matrices regularized input 0: MEAN CURVATURE, flags 0, avgs 5, name mean_curvature labeling surface... 466 labels changed using aseg relabeling using gibbs priors... 000: 8029 changed, 120537 examined... 001: 1841 changed, 31801 examined... 002: 564 changed, 9653 examined... 003: 231 changed, 3163 examined... 004: 121 changed, 1332 examined... 005: 69 changed, 703 examined... 006: 32 changed, 372 examined... 007: 25 changed, 187 examined... 008: 11 changed, 145 examined... 009: 9 changed, 73 examined... 010: 7 changed, 59 examined... 011: 6 changed, 42 examined... 012: 7 changed, 34 examined... 013: 2 changed, 31 examined... 014: 1 changed, 10 examined... 015: 0 changed, 7 examined... 127 labels changed using aseg 000: 283 total segments, 201 labels (3109 vertices) changed 001: 98 total segments, 16 labels (56 vertices) changed 002: 83 total segments, 1 labels (1 vertices) changed 003: 82 total segments, 0 labels (0 vertices) changed 10 filter iterations complete (10 requested, 50 changed) rationalizing unknown annotations with cortex label relabeling Medial_wall label... 965 vertices marked for relabeling... 965 labels changed in reclassification. writing output to ../label/rh.aparc.a2009s.annot... classification took 0 minutes and 18 seconds. PIDs (81125 81128) completed and logs appended. #----------------------------------------- #@# Parcellation Stats 2 lh Thu Feb 11 02:04:51 UTC 2021 /output/january_2021/subject1/scripts mris_anatomical_stats -th3 -mgz -cortex ../label/lh.cortex.label -f ../stats/lh.aparc.a2009s.stats -b -a ../label/lh.aparc.a2009s.annot -c ../label/aparc.annot.a2009s.ctab subject1 lh white #----------------------------------------- #@# Parcellation Stats 2 rh Thu Feb 11 02:04:51 UTC 2021 /output/january_2021/subject1/scripts mris_anatomical_stats -th3 -mgz -cortex ../label/rh.cortex.label -f ../stats/rh.aparc.a2009s.stats -b -a ../label/rh.aparc.a2009s.annot -c ../label/aparc.annot.a2009s.ctab subject1 rh white Waiting for PID 81207 of (81207 81210) to complete... Waiting for PID 81210 of (81207 81210) to complete... mris_anatomical_stats -th3 -mgz -cortex ../label/lh.cortex.label -f ../stats/lh.aparc.a2009s.stats -b -a ../label/lh.aparc.a2009s.annot -c ../label/aparc.annot.a2009s.ctab subject1 lh white computing statistics for each annotation in ../label/lh.aparc.a2009s.annot. reading volume /output/january_2021/subject1/mri/wm.mgz... reading input surface /output/january_2021/subject1/surf/lh.white... reading input pial surface /output/january_2021/subject1/surf/lh.pial... reading input white surface /output/january_2021/subject1/surf/lh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. INFO: using ../label/lh.cortex.label as mask to calc cortex NumVert, SurfArea and MeanThickness. Using TH3 vertex volume calc Total face volume 199536 Total vertex volume 195611 (mask=0) reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Saving annotation colortable ../label/aparc.annot.a2009s.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1642668 mm^3 (det: 1.185940 ) lhCtxGM: 190427.402 189675.000 diff= 752.4 pctdiff= 0.395 rhCtxGM: 178076.111 177439.000 diff= 637.1 pctdiff= 0.358 lhCtxWM: 199404.964 197470.500 diff= 1934.5 pctdiff= 0.970 rhCtxWM: 207751.351 212450.500 diff=-4699.1 pctdiff=-2.262 SubCortGMVol 61310.000 SupraTentVol 874938.828 (868100.000) diff=6838.828 pctdiff=0.782 SupraTentVolNotVent 845218.828 (838380.000) diff=6838.828 pctdiff=0.809 BrainSegVol 1025362.000 (1021360.000) diff=4002.000 pctdiff=0.390 BrainSegVolNotVent 989963.000 (988494.828) diff=1468.172 pctdiff=0.148 BrainSegVolNotVent 989963.000 CerebellumVol 151490.000 VentChorVol 29720.000 3rd4th5thCSF 5679.000 CSFVol 1677.000, OptChiasmVol 93.000 MaskVol 1624348.000 1139 784 1820 2.298 0.438 0.150 0.034 17 1.6 G&S_frontomargin 1740 1210 2392 1.963 0.616 0.165 0.053 34 4.0 G&S_occipital_inf 1848 1031 2735 2.392 0.627 0.102 0.024 12 2.0 G&S_paracentral 1003 633 2964 3.348 0.846 0.118 0.044 11 1.8 G&S_subcentral 609 383 1121 2.333 0.422 0.150 0.043 10 1.2 G&S_transv_frontopol 2103 1409 3604 2.595 0.473 0.120 0.026 23 2.4 G&S_cingul-Ant 1119 795 1896 2.482 0.419 0.109 0.020 9 1.1 G&S_cingul-Mid-Ant 1301 898 2159 2.461 0.440 0.141 0.035 18 1.7 G&S_cingul-Mid-Post 684 405 1238 2.701 0.427 0.156 0.046 12 1.4 G_cingul-Post-dorsal 394 236 516 1.836 0.939 0.162 0.072 10 1.5 G_cingul-Post-ventral 1216 708 1830 2.147 0.548 0.119 0.033 13 1.8 G_cuneus 1580 935 3806 2.888 0.592 0.132 0.046 29 3.0 G_front_inf-Opercular 320 192 678 2.471 0.393 0.139 0.033 5 0.4 G_front_inf-Orbital 958 610 2066 2.555 0.350 0.124 0.030 11 1.3 G_front_inf-Triangul 4711 2769 8237 2.453 0.414 0.135 0.036 74 6.9 G_front_middle 8764 5073 15714 2.615 0.499 0.121 0.032 103 11.5 G_front_sup 380 334 1489 4.030 0.947 0.194 0.060 5 1.2 G_Ins_lg&S_cent_ins 611 372 1958 3.357 1.103 0.136 0.056 12 1.3 G_insular_short 888 647 1438 1.954 0.406 0.139 0.050 14 2.4 G_occipital_middle 1037 676 1364 1.882 0.536 0.152 0.053 18 2.9 G_occipital_sup 1918 1315 4941 2.605 0.998 0.165 0.063 44 5.5 G_oc-temp_lat-fusifor 911 814 1872 2.128 0.614 0.152 0.042 17 1.6 G_oc-temp_med-Lingual 1181 770 3534 2.927 1.019 0.146 0.054 22 2.5 G_oc-temp_med-Parahip 2289 1382 5053 2.739 0.709 0.136 0.044 36 3.9 G_orbital 2065 1134 4135 2.588 0.666 0.126 0.034 32 2.8 G_pariet_inf-Angular 3974 2282 8527 2.751 0.866 0.123 0.036 54 5.9 G_pariet_inf-Supramar 3614 2034 5145 2.200 0.514 0.106 0.024 33 3.6 G_parietal_sup 2398 1247 3407 2.387 0.740 0.108 0.031 21 3.5 G_postcentral 1931 990 3300 2.672 0.507 0.094 0.022 14 1.7 G_precentral 1849 1109 2650 2.124 0.436 0.120 0.033 23 2.6 G_precuneus 1099 635 2574 2.714 0.706 0.134 0.049 24 2.3 G_rectus 168 107 437 3.266 1.023 0.107 0.039 2 0.2 G_subcallosal 249 160 473 2.673 0.866 0.130 0.078 5 0.7 G_temp_sup-G_T_transv 1044 675 3397 3.355 1.103 0.146 0.072 27 3.3 G_temp_sup-Lateral 483 338 1578 2.995 0.739 0.132 0.030 13 0.6 G_temp_sup-Plan_polar 838 466 2346 3.627 0.972 0.139 0.076 16 2.6 G_temp_sup-Plan_tempo 2999 1984 5973 2.315 0.770 0.170 0.065 69 9.0 G_temporal_inf 2380 1550 6591 2.708 0.831 0.159 0.075 61 8.8 G_temporal_middle 272 181 317 1.964 0.334 0.096 0.012 1 0.1 Lat_Fis-ant-Horizont 261 197 396 2.535 0.560 0.120 0.021 2 0.2 Lat_Fis-ant-Vertical 1025 620 1787 3.350 1.031 0.138 0.071 18 3.3 Lat_Fis-post 1731 1105 2182 1.727 0.549 0.151 0.045 27 3.6 Pole_occipital 1706 1092 5352 3.042 0.767 0.152 0.061 41 4.5 Pole_temporal 1459 1128 3001 2.478 0.717 0.177 0.076 37 4.7 S_calcarine 2572 1628 3188 2.167 0.509 0.121 0.029 26 3.2 S_central 1129 723 1543 2.348 0.446 0.136 0.036 11 2.0 S_cingul-Marginalis 458 312 743 2.483 0.438 0.091 0.016 2 0.2 S_circular_insula_ant 819 632 2035 3.485 1.066 0.127 0.035 6 1.4 S_circular_insula_inf 1424 977 2392 2.728 0.740 0.126 0.046 18 3.0 S_circular_insula_sup 1354 950 1884 2.140 0.610 0.133 0.052 20 3.5 S_collat_transv_ant 254 211 313 1.826 0.626 0.180 0.060 4 0.6 S_collat_transv_post 2063 1392 2741 2.180 0.389 0.115 0.024 17 1.9 S_front_inf 1258 793 1714 2.139 0.428 0.133 0.037 15 1.6 S_front_middle 2763 1862 3854 2.357 0.414 0.119 0.026 22 3.1 S_front_sup 261 188 409 2.093 0.464 0.099 0.016 1 0.1 S_interm_prim-Jensen 3384 2132 4246 2.069 0.448 0.109 0.021 25 3.1 S_intrapariet&P_trans 575 420 718 1.709 0.491 0.119 0.019 5 0.4 S_oc_middle&Lunatus 551 398 687 2.031 0.460 0.139 0.037 7 1.0 S_oc_sup&transversal 576 415 1085 2.302 0.542 0.151 0.045 9 1.2 S_occipital_ant 789 591 1203 1.930 0.450 0.143 0.040 9 1.3 S_oc-temp_lat 1337 996 1924 1.999 0.778 0.130 0.041 15 2.3 S_oc-temp_med&Lingual 189 140 395 3.111 0.553 0.165 0.028 3 0.2 S_orbital_lateral 641 454 966 2.378 0.722 0.119 0.018 7 0.4 S_orbital_med-olfact 1495 971 2397 2.872 0.513 0.139 0.038 16 2.3 S_orbital-H_Shaped 1309 968 2291 2.321 0.511 0.171 0.053 22 3.4 S_parieto_occipital 1228 674 1126 2.026 0.956 0.132 0.048 27 2.1 S_pericallosal 4402 2950 5408 1.933 0.589 0.113 0.026 33 5.1 S_postcentral 1219 835 1685 2.382 0.382 0.124 0.023 9 1.3 S_precentral-inf-part 1047 713 1524 2.492 0.391 0.115 0.020 7 1.0 S_precentral-sup-part 542 393 803 2.435 0.565 0.134 0.025 5 0.6 S_suborbital 784 768 1372 2.195 0.481 0.188 0.045 9 2.0 S_subparietal 880 608 1199 2.021 0.526 0.117 0.027 6 0.9 S_temporal_inf 2685 2111 7488 2.987 1.124 0.134 0.052 44 5.8 S_temporal_sup 78 42 285 3.258 0.896 0.094 0.023 0 0.1 S_temporal_transverse mris_anatomical_stats -th3 -mgz -cortex ../label/rh.cortex.label -f ../stats/rh.aparc.a2009s.stats -b -a ../label/rh.aparc.a2009s.annot -c ../label/aparc.annot.a2009s.ctab subject1 rh white computing statistics for each annotation in ../label/rh.aparc.a2009s.annot. reading volume /output/january_2021/subject1/mri/wm.mgz... reading input surface /output/january_2021/subject1/surf/rh.white... reading input pial surface /output/january_2021/subject1/surf/rh.pial... reading input white surface /output/january_2021/subject1/surf/rh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. INFO: using ../label/rh.cortex.label as mask to calc cortex NumVert, SurfArea and MeanThickness. Using TH3 vertex volume calc Total face volume 184675 Total vertex volume 179898 (mask=0) reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Saving annotation colortable ../label/aparc.annot.a2009s.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1642668 mm^3 (det: 1.185940 ) lhCtxGM: 190427.402 189675.000 diff= 752.4 pctdiff= 0.395 rhCtxGM: 178076.111 177439.000 diff= 637.1 pctdiff= 0.358 lhCtxWM: 199404.964 197470.500 diff= 1934.5 pctdiff= 0.970 rhCtxWM: 207751.351 212450.500 diff=-4699.1 pctdiff=-2.262 SubCortGMVol 61310.000 SupraTentVol 874938.828 (868100.000) diff=6838.828 pctdiff=0.782 SupraTentVolNotVent 845218.828 (838380.000) diff=6838.828 pctdiff=0.809 BrainSegVol 1025362.000 (1021360.000) diff=4002.000 pctdiff=0.390 BrainSegVolNotVent 989963.000 (988494.828) diff=1468.172 pctdiff=0.148 BrainSegVolNotVent 989963.000 CerebellumVol 151490.000 VentChorVol 29720.000 3rd4th5thCSF 5679.000 CSFVol 1677.000, OptChiasmVol 93.000 MaskVol 1624348.000 761 536 1191 2.203 0.448 0.133 0.034 9 1.1 G&S_frontomargin 1326 896 2908 2.633 0.763 0.165 0.073 31 4.0 G&S_occipital_inf 1945 1120 2712 2.178 0.742 0.103 0.029 21 2.5 G&S_paracentral 746 484 1826 2.826 0.636 0.111 0.033 10 0.9 G&S_subcentral 1396 861 2195 2.236 0.449 0.144 0.035 24 1.9 G&S_transv_frontopol 2757 1804 4680 2.569 0.424 0.123 0.028 37 2.8 G&S_cingul-Ant 1237 807 2352 2.710 0.479 0.108 0.027 10 1.2 G&S_cingul-Mid-Ant 1415 947 2343 2.501 0.383 0.114 0.025 15 1.3 G&S_cingul-Mid-Post 805 436 1399 2.735 0.560 0.143 0.056 16 1.7 G_cingul-Post-dorsal 110 62 383 3.956 0.768 0.138 0.091 1 0.5 G_cingul-Post-ventral 2155 1319 2541 1.704 0.457 0.139 0.043 41 4.0 G_cuneus 962 513 1716 2.580 0.299 0.121 0.034 18 1.1 G_front_inf-Opercular 391 222 739 2.598 0.412 0.140 0.038 6 0.5 G_front_inf-Orbital 685 402 1122 2.291 0.293 0.137 0.038 10 1.2 G_front_inf-Triangul 3423 2034 6061 2.413 0.492 0.137 0.036 56 5.0 G_front_middle 6883 3793 12138 2.690 0.485 0.118 0.030 84 8.9 G_front_sup 276 164 487 2.350 1.055 0.147 0.084 5 1.0 G_Ins_lg&S_cent_ins 408 241 1304 3.240 0.903 0.138 0.055 6 0.9 G_insular_short 2945 1808 4673 2.116 0.525 0.136 0.034 44 4.2 G_occipital_middle 1699 1051 1889 1.716 0.374 0.130 0.031 22 2.1 G_occipital_sup 1392 938 3167 2.495 0.637 0.167 0.055 26 3.6 G_oc-temp_lat-fusifor 1159 957 2832 2.352 0.717 0.161 0.055 24 2.7 G_oc-temp_med-Lingual 64 38 287 3.042 1.300 0.142 0.057 1 0.2 G_oc-temp_med-Parahip 2664 1643 6199 2.946 0.736 0.137 0.036 40 3.6 G_orbital 4116 2544 8031 2.433 0.528 0.139 0.040 64 6.7 G_pariet_inf-Angular 1876 1101 3362 2.503 0.623 0.128 0.043 24 3.5 G_pariet_inf-Supramar 3723 2168 5675 2.149 0.575 0.118 0.031 42 4.7 G_parietal_sup 2619 1460 4124 2.284 0.514 0.099 0.025 19 2.9 G_postcentral 2779 1539 4146 2.379 0.511 0.102 0.021 22 2.6 G_precentral 2653 1519 4073 2.260 0.533 0.119 0.037 37 4.2 G_precuneus 900 571 2340 2.839 0.574 0.144 0.045 18 1.5 G_rectus 282 188 815 3.765 0.653 0.140 0.061 5 0.5 G_subcallosal 77 58 181 3.159 0.843 0.130 0.031 1 0.1 G_temp_sup-G_T_transv 518 451 1660 3.398 1.009 0.157 0.052 11 1.6 G_temp_sup-Lateral 398 255 1402 3.270 0.717 0.135 0.058 6 0.9 G_temp_sup-Plan_polar 243 163 498 3.049 0.798 0.127 0.022 2 0.2 G_temp_sup-Plan_tempo 1552 999 3995 2.575 0.988 0.157 0.067 32 5.0 G_temporal_inf 1321 808 3820 3.337 0.894 0.150 0.074 23 4.3 G_temporal_middle 295 202 385 2.108 0.321 0.107 0.018 2 0.2 Lat_Fis-ant-Horizont 155 113 241 2.356 0.288 0.135 0.024 1 0.2 Lat_Fis-ant-Vertical 391 279 744 2.613 0.657 0.094 0.018 1 0.3 Lat_Fis-post 3486 2320 5222 1.927 0.788 0.159 0.048 57 7.5 Pole_occipital 1002 699 2431 2.642 1.015 0.185 0.074 21 3.6 Pole_temporal 1223 953 1811 1.884 0.845 0.172 0.053 24 3.0 S_calcarine 4046 2660 5153 2.145 0.515 0.116 0.024 38 4.1 S_central 2051 1431 2818 2.239 0.512 0.133 0.035 23 3.5 S_cingul-Marginalis 496 333 854 2.984 0.706 0.103 0.020 3 0.4 S_circular_insula_ant 355 353 1512 3.546 1.317 0.235 0.074 13 1.3 S_circular_insula_inf 829 575 1221 2.522 0.401 0.111 0.021 5 0.7 S_circular_insula_sup 187 137 271 1.628 0.691 0.125 0.031 2 0.2 S_collat_transv_ant 550 359 744 2.222 0.934 0.111 0.028 4 0.6 S_collat_transv_post 1293 853 1681 2.139 0.322 0.105 0.020 8 1.1 S_front_inf 1801 1215 2331 2.101 0.371 0.116 0.024 15 1.8 S_front_middle 2280 1501 3316 2.237 0.454 0.107 0.021 18 2.1 S_front_sup 405 288 498 2.259 0.432 0.143 0.035 4 0.7 S_interm_prim-Jensen 5580 3518 6655 1.976 0.418 0.103 0.020 40 4.6 S_intrapariet&P_trans 712 442 821 2.084 0.624 0.153 0.043 10 1.3 S_oc_middle&Lunatus 2042 1375 2146 1.781 0.422 0.124 0.029 21 2.1 S_oc_sup&transversal 619 398 807 2.034 0.560 0.107 0.023 5 0.6 S_occipital_ant 417 320 600 1.955 0.479 0.120 0.025 2 0.5 S_oc-temp_lat 253 194 457 2.061 0.490 0.128 0.023 3 0.2 S_oc-temp_med&Lingual 337 226 470 2.264 0.325 0.126 0.037 3 0.5 S_orbital_lateral 750 511 1254 2.720 1.056 0.130 0.035 9 0.9 S_orbital_med-olfact 1720 1115 2753 2.830 0.584 0.134 0.032 16 2.4 S_orbital-H_Shaped 2125 1603 2588 1.860 0.498 0.161 0.043 29 4.9 S_parieto_occipital 1840 1091 2144 2.197 0.963 0.114 0.034 23 2.5 S_pericallosal 3657 2569 4096 1.795 0.521 0.116 0.024 28 4.0 S_postcentral 559 300 689 2.174 0.444 0.101 0.022 6 0.5 S_precentral-inf-part 1104 736 1514 2.425 0.410 0.103 0.021 5 0.9 S_precentral-sup-part 279 201 400 2.442 0.538 0.125 0.017 3 0.2 S_suborbital 1571 919 1914 2.259 0.437 0.136 0.042 23 2.5 S_subparietal 387 264 732 2.221 0.841 0.102 0.039 5 0.5 S_temporal_inf 3879 2490 7219 2.611 0.875 0.132 0.048 53 7.9 S_temporal_sup 63 54 141 2.450 0.754 0.121 0.012 0 0.0 S_temporal_transverse PIDs (81207 81210) completed and logs appended. #----------------------------------------- #@# Cortical Parc 3 lh Thu Feb 11 02:05:20 UTC 2021 /output/january_2021/subject1/scripts mris_ca_label -l ../label/lh.cortex.label -aseg ../mri/aseg.presurf.mgz -seed 1234 subject1 lh ../surf/lh.sphere.reg /opt/freesurfer/average/lh.DKTaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ../label/lh.aparc.DKTatlas.annot #----------------------------------------- #@# Cortical Parc 3 rh Thu Feb 11 02:05:20 UTC 2021 /output/january_2021/subject1/scripts mris_ca_label -l ../label/rh.cortex.label -aseg ../mri/aseg.presurf.mgz -seed 1234 subject1 rh ../surf/rh.sphere.reg /opt/freesurfer/average/rh.DKTaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ../label/rh.aparc.DKTatlas.annot Waiting for PID 81309 of (81309 81312) to complete... Waiting for PID 81312 of (81309 81312) to complete... mris_ca_label -l ../label/lh.cortex.label -aseg ../mri/aseg.presurf.mgz -seed 1234 subject1 lh ../surf/lh.sphere.reg /opt/freesurfer/average/lh.DKTaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ../label/lh.aparc.DKTatlas.annot setting seed for random number generator to 1234 using ../mri/aseg.presurf.mgz aseg volume to correct midline $Id: mris_ca_label.c,v 1.37 2014/02/04 17:46:42 fischl Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading atlas from /opt/freesurfer/average/lh.DKTaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs... reading color table from GCSA file.... average std = 1.4 using min determinant for regularization = 0.020 0 singular and 383 ill-conditioned covariance matrices regularized input 0: MEAN CURVATURE, flags 0, avgs 5, name mean_curvature labeling surface... 1396 labels changed using aseg relabeling using gibbs priors... 000: 1947 changed, 117888 examined... 001: 426 changed, 8897 examined... 002: 108 changed, 2361 examined... 003: 37 changed, 634 examined... 004: 21 changed, 221 examined... 005: 17 changed, 123 examined... 006: 4 changed, 87 examined... 007: 6 changed, 28 examined... 008: 8 changed, 34 examined... 009: 3 changed, 42 examined... 010: 2 changed, 28 examined... 011: 2 changed, 7 examined... 012: 2 changed, 10 examined... 013: 2 changed, 14 examined... 014: 1 changed, 9 examined... 015: 1 changed, 8 examined... 016: 0 changed, 7 examined... 233 labels changed using aseg 000: 74 total segments, 41 labels (464 vertices) changed 001: 34 total segments, 1 labels (1 vertices) changed 002: 33 total segments, 0 labels (0 vertices) changed 10 filter iterations complete (10 requested, 8 changed) rationalizing unknown annotations with cortex label relabeling unknown label... relabeling corpuscallosum label... 519 vertices marked for relabeling... 519 labels changed in reclassification. writing output to ../label/lh.aparc.DKTatlas.annot... classification took 0 minutes and 14 seconds. mris_ca_label -l ../label/rh.cortex.label -aseg ../mri/aseg.presurf.mgz -seed 1234 subject1 rh ../surf/rh.sphere.reg /opt/freesurfer/average/rh.DKTaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ../label/rh.aparc.DKTatlas.annot setting seed for random number generator to 1234 using ../mri/aseg.presurf.mgz aseg volume to correct midline $Id: mris_ca_label.c,v 1.37 2014/02/04 17:46:42 fischl Exp $ $Id: mrisurf.c,v 1.781.2.6 2016/12/27 16:47:14 zkaufman Exp $ reading atlas from /opt/freesurfer/average/rh.DKTaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs... reading color table from GCSA file.... average std = 0.9 using min determinant for regularization = 0.009 0 singular and 325 ill-conditioned covariance matrices regularized input 0: MEAN CURVATURE, flags 0, avgs 5, name mean_curvature labeling surface... 1770 labels changed using aseg relabeling using gibbs priors... 000: 1949 changed, 120537 examined... 001: 417 changed, 8870 examined... 002: 121 changed, 2347 examined... 003: 51 changed, 695 examined... 004: 37 changed, 291 examined... 005: 24 changed, 200 examined... 006: 14 changed, 131 examined... 007: 8 changed, 90 examined... 008: 9 changed, 50 examined... 009: 8 changed, 40 examined... 010: 3 changed, 42 examined... 011: 2 changed, 22 examined... 012: 0 changed, 10 examined... 344 labels changed using aseg 000: 76 total segments, 42 labels (821 vertices) changed 001: 34 total segments, 1 labels (14 vertices) changed 002: 33 total segments, 0 labels (0 vertices) changed 10 filter iterations complete (10 requested, 6 changed) rationalizing unknown annotations with cortex label relabeling unknown label... relabeling corpuscallosum label... 445 vertices marked for relabeling... 445 labels changed in reclassification. writing output to ../label/rh.aparc.DKTatlas.annot... classification took 0 minutes and 14 seconds. PIDs (81309 81312) completed and logs appended. #----------------------------------------- #@# Parcellation Stats 3 lh Thu Feb 11 02:05:34 UTC 2021 /output/january_2021/subject1/scripts mris_anatomical_stats -th3 -mgz -cortex ../label/lh.cortex.label -f ../stats/lh.aparc.DKTatlas.stats -b -a ../label/lh.aparc.DKTatlas.annot -c ../label/aparc.annot.DKTatlas.ctab subject1 lh white #----------------------------------------- #@# Parcellation Stats 3 rh Thu Feb 11 02:05:34 UTC 2021 /output/january_2021/subject1/scripts mris_anatomical_stats -th3 -mgz -cortex ../label/rh.cortex.label -f ../stats/rh.aparc.DKTatlas.stats -b -a ../label/rh.aparc.DKTatlas.annot -c ../label/aparc.annot.DKTatlas.ctab subject1 rh white Waiting for PID 81385 of (81385 81388) to complete... Waiting for PID 81388 of (81385 81388) to complete... mris_anatomical_stats -th3 -mgz -cortex ../label/lh.cortex.label -f ../stats/lh.aparc.DKTatlas.stats -b -a ../label/lh.aparc.DKTatlas.annot -c ../label/aparc.annot.DKTatlas.ctab subject1 lh white computing statistics for each annotation in ../label/lh.aparc.DKTatlas.annot. reading volume /output/january_2021/subject1/mri/wm.mgz... reading input surface /output/january_2021/subject1/surf/lh.white... reading input pial surface /output/january_2021/subject1/surf/lh.pial... reading input white surface /output/january_2021/subject1/surf/lh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. INFO: using ../label/lh.cortex.label as mask to calc cortex NumVert, SurfArea and MeanThickness. Using TH3 vertex volume calc Total face volume 199536 Total vertex volume 195611 (mask=0) reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Saving annotation colortable ../label/aparc.annot.DKTatlas.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1642668 mm^3 (det: 1.185940 ) lhCtxGM: 190427.402 189675.000 diff= 752.4 pctdiff= 0.395 rhCtxGM: 178076.111 177439.000 diff= 637.1 pctdiff= 0.358 lhCtxWM: 199404.964 197470.500 diff= 1934.5 pctdiff= 0.970 rhCtxWM: 207751.351 212450.500 diff=-4699.1 pctdiff=-2.262 SubCortGMVol 61310.000 SupraTentVol 874938.828 (868100.000) diff=6838.828 pctdiff=0.782 SupraTentVolNotVent 845218.828 (838380.000) diff=6838.828 pctdiff=0.809 BrainSegVol 1025362.000 (1021360.000) diff=4002.000 pctdiff=0.390 BrainSegVolNotVent 989963.000 (988494.828) diff=1468.172 pctdiff=0.148 BrainSegVolNotVent 989963.000 CerebellumVol 151490.000 VentChorVol 29720.000 3rd4th5thCSF 5679.000 CSFVol 1677.000, OptChiasmVol 93.000 MaskVol 1624348.000 1726 1170 3132 2.642 0.526 0.120 0.026 19 1.8 caudalanteriorcingulate 3826 2380 6120 2.512 0.396 0.125 0.029 43 4.7 caudalmiddlefrontal 1657 1058 2595 2.191 0.512 0.127 0.036 18 2.8 cuneus 605 398 1997 3.148 0.881 0.139 0.054 11 1.4 entorhinal 4259 2957 8988 2.417 0.904 0.151 0.059 85 11.4 fusiform 4301 2651 7212 2.333 0.629 0.124 0.034 57 6.6 inferiorparietal 5201 3481 10790 2.368 0.814 0.155 0.053 101 11.9 inferiortemporal 1825 1019 2428 2.064 0.956 0.143 0.061 39 4.5 isthmuscingulate 5351 3707 7417 1.873 0.554 0.152 0.048 86 11.8 lateraloccipital 4025 2546 7738 2.766 0.710 0.139 0.040 55 6.5 lateralorbitofrontal 1786 1480 3004 2.045 0.646 0.157 0.051 34 4.3 lingual 2159 1339 4245 2.569 0.702 0.129 0.037 38 3.3 medialorbitofrontal 4574 3137 11931 2.690 0.895 0.144 0.061 93 12.9 middletemporal 507 310 920 2.131 0.884 0.129 0.050 7 1.0 parahippocampal 3227 1895 4991 2.481 0.485 0.106 0.025 22 3.7 paracentral 2174 1362 4024 2.581 0.540 0.122 0.032 26 2.7 parsopercularis 860 554 1478 2.339 0.441 0.109 0.023 8 0.7 parsorbitalis 1899 1263 3403 2.453 0.430 0.120 0.027 20 2.0 parstriangularis 1181 932 1932 2.053 0.664 0.173 0.054 24 2.9 pericalcarine 6485 3933 10020 2.331 0.855 0.117 0.032 63 9.3 postcentral 1587 1071 2501 2.428 0.471 0.152 0.042 28 2.7 posteriorcingulate 5467 3268 8985 2.557 0.621 0.112 0.029 50 6.8 precentral 3932 2818 6379 2.259 0.532 0.154 0.046 54 8.4 precuneus 1444 937 2511 2.614 0.486 0.125 0.028 20 1.6 rostralanteriorcingulate 5609 3567 9164 2.356 0.450 0.137 0.035 79 7.9 rostralmiddlefrontal 11305 6931 18864 2.501 0.506 0.124 0.032 127 14.6 superiorfrontal 6983 4215 9747 2.135 0.534 0.106 0.023 58 7.0 superiorparietal 4421 3010 12550 3.149 1.036 0.141 0.061 91 11.8 superiortemporal 7449 4445 13930 2.647 0.945 0.116 0.035 84 10.7 supramarginal 358 213 697 3.095 0.897 0.124 0.066 8 0.8 transversetemporal 2132 1612 5919 3.349 1.088 0.154 0.054 31 5.4 insula mris_anatomical_stats -th3 -mgz -cortex ../label/rh.cortex.label -f ../stats/rh.aparc.DKTatlas.stats -b -a ../label/rh.aparc.DKTatlas.annot -c ../label/aparc.annot.DKTatlas.ctab subject1 rh white computing statistics for each annotation in ../label/rh.aparc.DKTatlas.annot. reading volume /output/january_2021/subject1/mri/wm.mgz... reading input surface /output/january_2021/subject1/surf/rh.white... reading input pial surface /output/january_2021/subject1/surf/rh.pial... reading input white surface /output/january_2021/subject1/surf/rh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. INFO: using ../label/rh.cortex.label as mask to calc cortex NumVert, SurfArea and MeanThickness. Using TH3 vertex volume calc Total face volume 184675 Total vertex volume 179898 (mask=0) reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Saving annotation colortable ../label/aparc.annot.DKTatlas.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1642668 mm^3 (det: 1.185940 ) lhCtxGM: 190427.402 189675.000 diff= 752.4 pctdiff= 0.395 rhCtxGM: 178076.111 177439.000 diff= 637.1 pctdiff= 0.358 lhCtxWM: 199404.964 197470.500 diff= 1934.5 pctdiff= 0.970 rhCtxWM: 207751.351 212450.500 diff=-4699.1 pctdiff=-2.262 SubCortGMVol 61310.000 SupraTentVol 874938.828 (868100.000) diff=6838.828 pctdiff=0.782 SupraTentVolNotVent 845218.828 (838380.000) diff=6838.828 pctdiff=0.809 BrainSegVol 1025362.000 (1021360.000) diff=4002.000 pctdiff=0.390 BrainSegVolNotVent 989963.000 (988494.828) diff=1468.172 pctdiff=0.148 BrainSegVolNotVent 989963.000 CerebellumVol 151490.000 VentChorVol 29720.000 3rd4th5thCSF 5679.000 CSFVol 1677.000, OptChiasmVol 93.000 MaskVol 1624348.000 1568 1015 2714 2.483 0.514 0.103 0.025 16 1.3 caudalanteriorcingulate 1710 1030 2559 2.275 0.447 0.114 0.024 18 1.7 caudalmiddlefrontal 2658 1773 3021 1.676 0.415 0.146 0.040 37 4.9 cuneus 41 18 31 1.218 0.492 0.077 0.022 0 0.0 entorhinal 1801 1254 3902 2.380 0.670 0.157 0.044 31 3.7 fusiform 9601 6140 16878 2.312 0.595 0.129 0.033 125 12.6 inferiorparietal 2686 1782 5877 2.402 0.945 0.155 0.062 53 7.8 inferiortemporal 1277 723 2094 2.326 1.193 0.141 0.060 22 3.4 isthmuscingulate 7677 4833 10986 2.052 0.687 0.148 0.048 123 15.3 lateraloccipital 4255 2698 8346 2.911 0.795 0.137 0.037 55 6.2 lateralorbitofrontal 1849 1550 4731 2.365 0.927 0.160 0.048 32 3.9 lingual 1984 1303 4397 2.748 0.701 0.134 0.039 34 2.7 medialorbitofrontal 2948 1782 6838 3.071 1.013 0.147 0.073 49 9.4 middletemporal 3446 2105 4984 2.415 0.628 0.115 0.033 34 5.2 paracentral 1507 860 2251 2.413 0.343 0.118 0.029 17 1.8 parsopercularis 1021 656 1924 2.740 0.437 0.131 0.029 13 1.1 parsorbitalis 1751 1095 2637 2.284 0.343 0.129 0.033 20 2.3 parstriangularis 1621 1227 1893 1.584 0.619 0.180 0.053 45 4.0 pericalcarine 7724 4840 11367 2.185 0.613 0.109 0.025 62 8.5 postcentral 2099 1290 3231 2.521 0.493 0.131 0.035 31 2.8 posteriorcingulate 6480 3934 9601 2.348 0.516 0.107 0.022 59 6.1 precentral 6692 4107 9206 2.174 0.574 0.130 0.039 93 11.6 precuneus 1103 694 1954 2.807 0.555 0.126 0.028 17 1.1 rostralanteriorcingulate 5273 3406 8488 2.314 0.475 0.130 0.031 67 6.9 rostralmiddlefrontal 12255 7476 20014 2.492 0.504 0.118 0.027 138 13.5 superiorfrontal 10133 6261 13004 1.956 0.499 0.108 0.025 89 10.1 superiorparietal 2365 1837 6690 2.970 0.961 0.149 0.049 37 5.6 superiortemporal 4198 2703 6486 2.283 0.668 0.128 0.034 46 6.1 supramarginal 101 72 204 2.916 0.779 0.126 0.025 1 0.1 transversetemporal 1576 1031 3591 2.896 0.970 0.140 0.051 23 3.3 insula PIDs (81385 81388) completed and logs appended. #----------------------------------------- #@# WM/GM Contrast lh Thu Feb 11 02:06:05 UTC 2021 /output/january_2021/subject1/scripts pctsurfcon --s subject1 --lh-only #----------------------------------------- #@# WM/GM Contrast rh Thu Feb 11 02:06:05 UTC 2021 /output/january_2021/subject1/scripts pctsurfcon --s subject1 --rh-only Waiting for PID 81489 of (81489 81492) to complete... Waiting for PID 81492 of (81489 81492) to complete... pctsurfcon --s subject1 --lh-only Log file is /output/january_2021/subject1/scripts/pctsurfcon.log Thu Feb 11 02:06:05 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/scripts /opt/freesurfer/bin/pctsurfcon $Id: pctsurfcon,v 1.15 2016/02/12 21:43:15 zkaufman Exp $ Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux FREESURFER_HOME /opt/freesurfer mri_vol2surf --mov /output/january_2021/subject1/mri/rawavg.mgz --hemi lh --noreshape --interp trilinear --projdist -1 --o /output/january_2021/subject1/surf/tmp.pctsurfcon.81489/lh.wm.mgh --regheader subject1 --cortex srcvol = /output/january_2021/subject1/mri/rawavg.mgz srcreg unspecified srcregold = 0 srcwarp unspecified surf = white hemi = lh ProjDist = -1 reshape = 0 interp = trilinear float2int = round GetProjMax = 0 INFO: float2int code = 0 INFO: changing type to float Done loading volume Computing registration from header. Using /output/january_2021/subject1/mri/orig.mgz as target reference. -------- original matrix ----------- 0.00000 1.00000 0.00000 -0.00002; -0.99983 0.00000 -0.01844 0.00005; -0.01850 0.00000 0.99983 -0.00003; 0.00000 0.00000 0.00000 1.00000; -------- original matrix ----------- Loading label /output/january_2021/subject1/label/lh.cortex.label Reading surface /output/january_2021/subject1/surf/lh.white Done reading source surface Mapping Source Volume onto Source Subject Surface 1 -1 -1 -1 using old Done mapping volume to surface Number of source voxels hit = 61248 Masking with /output/january_2021/subject1/label/lh.cortex.label Writing to /output/january_2021/subject1/surf/tmp.pctsurfcon.81489/lh.wm.mgh Dim: 117888 1 1 mri_vol2surf --mov /output/january_2021/subject1/mri/rawavg.mgz --hemi lh --noreshape --interp trilinear --o /output/january_2021/subject1/surf/tmp.pctsurfcon.81489/lh.gm.mgh --projfrac 0.3 --regheader subject1 --cortex srcvol = /output/january_2021/subject1/mri/rawavg.mgz srcreg unspecified srcregold = 0 srcwarp unspecified surf = white hemi = lh ProjFrac = 0.3 thickness = thickness reshape = 0 interp = trilinear float2int = round GetProjMax = 0 INFO: float2int code = 0 INFO: changing type to float Done loading volume Computing registration from header. Using /output/january_2021/subject1/mri/orig.mgz as target reference. -------- original matrix ----------- 0.00000 1.00000 0.00000 -0.00002; -0.99983 0.00000 -0.01844 0.00005; -0.01850 0.00000 0.99983 -0.00003; 0.00000 0.00000 0.00000 1.00000; -------- original matrix ----------- Loading label /output/january_2021/subject1/label/lh.cortex.label Reading surface /output/january_2021/subject1/surf/lh.white Done reading source surface Reading thickness /output/january_2021/subject1/surf/lh.thickness Done Mapping Source Volume onto Source Subject Surface 1 0.3 0.3 0.3 using old Done mapping volume to surface Number of source voxels hit = 73117 Masking with /output/january_2021/subject1/label/lh.cortex.label Writing to /output/january_2021/subject1/surf/tmp.pctsurfcon.81489/lh.gm.mgh Dim: 117888 1 1 mri_concat /output/january_2021/subject1/surf/tmp.pctsurfcon.81489/lh.wm.mgh /output/january_2021/subject1/surf/tmp.pctsurfcon.81489/lh.gm.mgh --paired-diff-norm --mul 100 --o /output/january_2021/subject1/surf/lh.w-g.pct.mgh ninputs = 2 Checking inputs nframestot = 2 Allocing output Done allocing Combining pairs nframes = 1 Multiplying by 100.000000 Writing to /output/january_2021/subject1/surf/lh.w-g.pct.mgh mri_segstats --in /output/january_2021/subject1/surf/lh.w-g.pct.mgh --annot subject1 lh aparc --sum /output/january_2021/subject1/stats/lh.w-g.pct.stats --snr $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ cwd cmdline mri_segstats --in /output/january_2021/subject1/surf/lh.w-g.pct.mgh --annot subject1 lh aparc --sum /output/january_2021/subject1/stats/lh.w-g.pct.stats --snr sysname Linux hostname 85b04e758063 machine x86_64 user root UseRobust 0 Constructing seg from annotation Reading annotation /output/january_2021/subject1/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 1000 Loading /output/january_2021/subject1/surf/lh.w-g.pct.mgh Vertex Area is 0.642612 mm^3 Generating list of segmentation ids Found 36 segmentations Computing statistics for each segmentation Reporting on 35 segmentations Using PrintSegStat mri_segstats done Cleaning up pctsurfcon --s subject1 --rh-only Log file is /output/january_2021/subject1/scripts/pctsurfcon.log Thu Feb 11 02:06:05 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/scripts /opt/freesurfer/bin/pctsurfcon $Id: pctsurfcon,v 1.15 2016/02/12 21:43:15 zkaufman Exp $ Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux FREESURFER_HOME /opt/freesurfer mri_vol2surf --mov /output/january_2021/subject1/mri/rawavg.mgz --hemi rh --noreshape --interp trilinear --projdist -1 --o /output/january_2021/subject1/surf/tmp.pctsurfcon.81492/rh.wm.mgh --regheader subject1 --cortex srcvol = /output/january_2021/subject1/mri/rawavg.mgz srcreg unspecified srcregold = 0 srcwarp unspecified surf = white hemi = rh ProjDist = -1 reshape = 0 interp = trilinear float2int = round GetProjMax = 0 INFO: float2int code = 0 INFO: changing type to float Done loading volume Computing registration from header. Using /output/january_2021/subject1/mri/orig.mgz as target reference. -------- original matrix ----------- 0.00000 1.00000 0.00000 -0.00002; -0.99983 0.00000 -0.01844 0.00005; -0.01850 0.00000 0.99983 -0.00003; 0.00000 0.00000 0.00000 1.00000; -------- original matrix ----------- Loading label /output/january_2021/subject1/label/rh.cortex.label Reading surface /output/january_2021/subject1/surf/rh.white Done reading source surface Mapping Source Volume onto Source Subject Surface 1 -1 -1 -1 using old Done mapping volume to surface Number of source voxels hit = 63226 Masking with /output/january_2021/subject1/label/rh.cortex.label Writing to /output/january_2021/subject1/surf/tmp.pctsurfcon.81492/rh.wm.mgh Dim: 120537 1 1 mri_vol2surf --mov /output/january_2021/subject1/mri/rawavg.mgz --hemi rh --noreshape --interp trilinear --o /output/january_2021/subject1/surf/tmp.pctsurfcon.81492/rh.gm.mgh --projfrac 0.3 --regheader subject1 --cortex srcvol = /output/january_2021/subject1/mri/rawavg.mgz srcreg unspecified srcregold = 0 srcwarp unspecified surf = white hemi = rh ProjFrac = 0.3 thickness = thickness reshape = 0 interp = trilinear float2int = round GetProjMax = 0 INFO: float2int code = 0 INFO: changing type to float Done loading volume Computing registration from header. Using /output/january_2021/subject1/mri/orig.mgz as target reference. -------- original matrix ----------- 0.00000 1.00000 0.00000 -0.00002; -0.99983 0.00000 -0.01844 0.00005; -0.01850 0.00000 0.99983 -0.00003; 0.00000 0.00000 0.00000 1.00000; -------- original matrix ----------- Loading label /output/january_2021/subject1/label/rh.cortex.label Reading surface /output/january_2021/subject1/surf/rh.white Done reading source surface Reading thickness /output/january_2021/subject1/surf/rh.thickness Done Mapping Source Volume onto Source Subject Surface 1 0.3 0.3 0.3 using old Done mapping volume to surface Number of source voxels hit = 74540 Masking with /output/january_2021/subject1/label/rh.cortex.label Writing to /output/january_2021/subject1/surf/tmp.pctsurfcon.81492/rh.gm.mgh Dim: 120537 1 1 mri_concat /output/january_2021/subject1/surf/tmp.pctsurfcon.81492/rh.wm.mgh /output/january_2021/subject1/surf/tmp.pctsurfcon.81492/rh.gm.mgh --paired-diff-norm --mul 100 --o /output/january_2021/subject1/surf/rh.w-g.pct.mgh ninputs = 2 Checking inputs nframestot = 2 Allocing output Done allocing Combining pairs nframes = 1 Multiplying by 100.000000 Writing to /output/january_2021/subject1/surf/rh.w-g.pct.mgh mri_segstats --in /output/january_2021/subject1/surf/rh.w-g.pct.mgh --annot subject1 rh aparc --sum /output/january_2021/subject1/stats/rh.w-g.pct.stats --snr $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ cwd cmdline mri_segstats --in /output/january_2021/subject1/surf/rh.w-g.pct.mgh --annot subject1 rh aparc --sum /output/january_2021/subject1/stats/rh.w-g.pct.stats --snr sysname Linux hostname 85b04e758063 machine x86_64 user root UseRobust 0 Constructing seg from annotation Reading annotation /output/january_2021/subject1/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Seg base 2000 Loading /output/january_2021/subject1/surf/rh.w-g.pct.mgh Vertex Area is 0.637383 mm^3 Generating list of segmentation ids Found 36 segmentations Computing statistics for each segmentation Reporting on 34 segmentations Using PrintSegStat mri_segstats done Cleaning up PIDs (81489 81492) completed and logs appended. #----------------------------------------- #@# Relabel Hypointensities Thu Feb 11 02:06:11 UTC 2021 /output/january_2021/subject1/mri mri_relabel_hypointensities aseg.presurf.mgz ../surf aseg.presurf.hypos.mgz reading input surface ../surf/lh.white... relabeling lh hypointensities... 19531 voxels changed to hypointensity... reading input surface ../surf/rh.white... relabeling rh hypointensities... 21604 voxels changed to hypointensity... 34511 hypointense voxels neighboring cortex changed #----------------------------------------- #@# AParc-to-ASeg aparc Thu Feb 11 02:06:33 UTC 2021 /output/january_2021/subject1 mri_aparc2aseg --s subject1 --volmask --aseg aseg.presurf.hypos --relabel mri/norm.mgz mri/transforms/talairach.m3z /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca mri/aseg.auto_noCCseg.label_intensities.txt #----------------------------------------- #@# AParc-to-ASeg a2009s Thu Feb 11 02:06:33 UTC 2021 /output/january_2021/subject1 mri_aparc2aseg --s subject1 --volmask --aseg aseg.presurf.hypos --relabel mri/norm.mgz mri/transforms/talairach.m3z /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca mri/aseg.auto_noCCseg.label_intensities.txt --a2009s #----------------------------------------- #@# AParc-to-ASeg DKTatlas Thu Feb 11 02:06:33 UTC 2021 /output/january_2021/subject1 mri_aparc2aseg --s subject1 --volmask --aseg aseg.presurf.hypos --relabel mri/norm.mgz mri/transforms/talairach.m3z /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca mri/aseg.auto_noCCseg.label_intensities.txt --annot aparc.DKTatlas --o mri/aparc.DKTatlas+aseg.mgz Waiting for PID 81714 of (81714 81717 81720) to complete... Waiting for PID 81717 of (81714 81717 81720) to complete... Waiting for PID 81720 of (81714 81717 81720) to complete... mri_aparc2aseg --s subject1 --volmask --aseg aseg.presurf.hypos --relabel mri/norm.mgz mri/transforms/talairach.m3z /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca mri/aseg.auto_noCCseg.label_intensities.txt relabeling unlikely voxels interior to white matter surface: norm: mri/norm.mgz XFORM: mri/transforms/talairach.m3z GCA: /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca label intensities: mri/aseg.auto_noCCseg.label_intensities.txt SUBJECTS_DIR /output/january_2021 subject subject1 outvol /output/january_2021/subject1/mri/aparc+aseg.mgz useribbon 0 baseoffset 0 RipUnknown 0 Reading lh white surface /output/january_2021/subject1/surf/lh.white Reading lh pial surface /output/january_2021/subject1/surf/lh.pial Loading lh annotations from /output/january_2021/subject1/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Reading rh white surface /output/january_2021/subject1/surf/rh.white Reading rh pial surface /output/january_2021/subject1/surf/rh.pial Loading rh annotations from /output/january_2021/subject1/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Have color table for lh white annotation Have color table for rh white annotation Loading ribbon segmentation from /output/january_2021/subject1/mri/ribbon.mgz Building hash of lh white Building hash of lh pial Building hash of rh white Building hash of rh pial Loading aseg from /output/january_2021/subject1/mri/aseg.presurf.hypos.mgz ASeg Vox2RAS: ----------- -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 1.00000 -128.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; ------------------------- Labeling Slice relabeling unlikely voxels in interior of white matter setting orig areas to linear transform determinant scaled 6.98 reading 47 labels from mri/aseg.auto_noCCseg.label_intensities.txt rescaling Left_Cerebral_White_Matter from 107 --> 112 rescaling Left_Cerebral_Cortex from 61 --> 84 rescaling Left_Lateral_Ventricle from 13 --> 21 rescaling Left_Inf_Lat_Vent from 34 --> 32 rescaling Left_Cerebellum_White_Matter from 86 --> 78 rescaling Left_Cerebellum_Cortex from 60 --> 54 rescaling Left_Thalamus from 94 --> 106 rescaling Left_Thalamus_Proper from 84 --> 85 rescaling Left_Caudate from 75 --> 97 rescaling Left_Putamen from 80 --> 75 rescaling Left_Pallidum from 98 --> 80 rescaling Third_Ventricle from 25 --> 35 rescaling Fourth_Ventricle from 22 --> 21 rescaling Brain_Stem from 81 --> 84 rescaling Left_Hippocampus from 57 --> 55 rescaling Left_Amygdala from 56 --> 58 rescaling CSF from 32 --> 51 rescaling Left_Accumbens_area from 62 --> 78 rescaling Left_VentralDC from 87 --> 84 rescaling Right_Cerebral_White_Matter from 105 --> 110 rescaling Right_Cerebral_Cortex from 58 --> 85 rescaling Right_Lateral_Ventricle from 13 --> 22 rescaling Right_Inf_Lat_Vent from 25 --> 23 rescaling Right_Cerebellum_White_Matter from 87 --> 82 rescaling Right_Cerebellum_Cortex from 59 --> 56 rescaling Right_Thalamus_Proper from 85 --> 77 rescaling Right_Caudate from 62 --> 87 rescaling Right_Putamen from 80 --> 84 rescaling Right_Pallidum from 97 --> 90 rescaling Right_Hippocampus from 53 --> 54 rescaling Right_Amygdala from 55 --> 51 rescaling Right_Accumbens_area from 65 --> 86 rescaling Right_VentralDC from 86 --> 84 rescaling Fifth_Ventricle from 40 --> 43 rescaling WM_hypointensities from 78 --> 81 rescaling non_WM_hypointensities from 40 --> 46 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 nctx = 368790 Used brute-force search on 0 voxels relabeling unlikely voxels in interior of white matter average std[0] = 7.3 pass 1: 1392 changed. pass 2: 203 changed. pass 3: 52 changed. pass 4: 23 changed. pass 5: 13 changed. pass 6: 5 changed. pass 7: 1 changed. pass 8: 0 changed. nchanged = 0 Writing output aseg to /output/january_2021/subject1/mri/aparc+aseg.mgz mri_aparc2aseg --s subject1 --volmask --aseg aseg.presurf.hypos --relabel mri/norm.mgz mri/transforms/talairach.m3z /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca mri/aseg.auto_noCCseg.label_intensities.txt --a2009s relabeling unlikely voxels interior to white matter surface: norm: mri/norm.mgz XFORM: mri/transforms/talairach.m3z GCA: /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca label intensities: mri/aseg.auto_noCCseg.label_intensities.txt SUBJECTS_DIR /output/january_2021 subject subject1 outvol /output/january_2021/subject1/mri/aparc.a2009s+aseg.mgz useribbon 0 baseoffset 10100 RipUnknown 0 Reading lh white surface /output/january_2021/subject1/surf/lh.white Reading lh pial surface /output/january_2021/subject1/surf/lh.pial Loading lh annotations from /output/january_2021/subject1/label/lh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Reading rh white surface /output/january_2021/subject1/surf/rh.white Reading rh pial surface /output/january_2021/subject1/surf/rh.pial Loading rh annotations from /output/january_2021/subject1/label/rh.aparc.a2009s.annot reading colortable from annotation file... colortable with 76 entries read (originally Simple_surface_labels2008.txt) Have color table for lh white annotation Have color table for rh white annotation Loading ribbon segmentation from /output/january_2021/subject1/mri/ribbon.mgz Building hash of lh white Building hash of lh pial Building hash of rh white Building hash of rh pial Loading aseg from /output/january_2021/subject1/mri/aseg.presurf.hypos.mgz ASeg Vox2RAS: ----------- -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 1.00000 -128.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; ------------------------- Labeling Slice relabeling unlikely voxels in interior of white matter setting orig areas to linear transform determinant scaled 6.98 reading 47 labels from mri/aseg.auto_noCCseg.label_intensities.txt rescaling Left_Cerebral_White_Matter from 107 --> 112 rescaling Left_Cerebral_Cortex from 61 --> 84 rescaling Left_Lateral_Ventricle from 13 --> 21 rescaling Left_Inf_Lat_Vent from 34 --> 32 rescaling Left_Cerebellum_White_Matter from 86 --> 78 rescaling Left_Cerebellum_Cortex from 60 --> 54 rescaling Left_Thalamus from 94 --> 106 rescaling Left_Thalamus_Proper from 84 --> 85 rescaling Left_Caudate from 75 --> 97 rescaling Left_Putamen from 80 --> 75 rescaling Left_Pallidum from 98 --> 80 rescaling Third_Ventricle from 25 --> 35 rescaling Fourth_Ventricle from 22 --> 21 rescaling Brain_Stem from 81 --> 84 rescaling Left_Hippocampus from 57 --> 55 rescaling Left_Amygdala from 56 --> 58 rescaling CSF from 32 --> 51 rescaling Left_Accumbens_area from 62 --> 78 rescaling Left_VentralDC from 87 --> 84 rescaling Right_Cerebral_White_Matter from 105 --> 110 rescaling Right_Cerebral_Cortex from 58 --> 85 rescaling Right_Lateral_Ventricle from 13 --> 22 rescaling Right_Inf_Lat_Vent from 25 --> 23 rescaling Right_Cerebellum_White_Matter from 87 --> 82 rescaling Right_Cerebellum_Cortex from 59 --> 56 rescaling Right_Thalamus_Proper from 85 --> 77 rescaling Right_Caudate from 62 --> 87 rescaling Right_Putamen from 80 --> 84 rescaling Right_Pallidum from 97 --> 90 rescaling Right_Hippocampus from 53 --> 54 rescaling Right_Amygdala from 55 --> 51 rescaling Right_Accumbens_area from 65 --> 86 rescaling Right_VentralDC from 86 --> 84 rescaling Fifth_Ventricle from 40 --> 43 rescaling WM_hypointensities from 78 --> 81 rescaling non_WM_hypointensities from 40 --> 46 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 nctx = 368861 Used brute-force search on 0 voxels relabeling unlikely voxels in interior of white matter average std[0] = 7.3 pass 1: 1392 changed. pass 2: 203 changed. pass 3: 52 changed. pass 4: 23 changed. pass 5: 13 changed. pass 6: 5 changed. pass 7: 1 changed. pass 8: 0 changed. nchanged = 0 Writing output aseg to /output/january_2021/subject1/mri/aparc.a2009s+aseg.mgz mri_aparc2aseg --s subject1 --volmask --aseg aseg.presurf.hypos --relabel mri/norm.mgz mri/transforms/talairach.m3z /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca mri/aseg.auto_noCCseg.label_intensities.txt --annot aparc.DKTatlas --o mri/aparc.DKTatlas+aseg.mgz relabeling unlikely voxels interior to white matter surface: norm: mri/norm.mgz XFORM: mri/transforms/talairach.m3z GCA: /opt/freesurfer/average/RB_all_2016-05-10.vc700.gca label intensities: mri/aseg.auto_noCCseg.label_intensities.txt SUBJECTS_DIR /output/january_2021 subject subject1 outvol mri/aparc.DKTatlas+aseg.mgz useribbon 0 baseoffset 0 RipUnknown 0 Reading lh white surface /output/january_2021/subject1/surf/lh.white Reading lh pial surface /output/january_2021/subject1/surf/lh.pial Loading lh annotations from /output/january_2021/subject1/label/lh.aparc.DKTatlas.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Reading rh white surface /output/january_2021/subject1/surf/rh.white Reading rh pial surface /output/january_2021/subject1/surf/rh.pial Loading rh annotations from /output/january_2021/subject1/label/rh.aparc.DKTatlas.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Have color table for lh white annotation Have color table for rh white annotation Loading ribbon segmentation from /output/january_2021/subject1/mri/ribbon.mgz Building hash of lh white Building hash of lh pial Building hash of rh white Building hash of rh pial Loading aseg from /output/january_2021/subject1/mri/aseg.presurf.hypos.mgz ASeg Vox2RAS: ----------- -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 1.00000 -128.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; ------------------------- Labeling Slice relabeling unlikely voxels in interior of white matter setting orig areas to linear transform determinant scaled 6.98 reading 47 labels from mri/aseg.auto_noCCseg.label_intensities.txt rescaling Left_Cerebral_White_Matter from 107 --> 112 rescaling Left_Cerebral_Cortex from 61 --> 84 rescaling Left_Lateral_Ventricle from 13 --> 21 rescaling Left_Inf_Lat_Vent from 34 --> 32 rescaling Left_Cerebellum_White_Matter from 86 --> 78 rescaling Left_Cerebellum_Cortex from 60 --> 54 rescaling Left_Thalamus from 94 --> 106 rescaling Left_Thalamus_Proper from 84 --> 85 rescaling Left_Caudate from 75 --> 97 rescaling Left_Putamen from 80 --> 75 rescaling Left_Pallidum from 98 --> 80 rescaling Third_Ventricle from 25 --> 35 rescaling Fourth_Ventricle from 22 --> 21 rescaling Brain_Stem from 81 --> 84 rescaling Left_Hippocampus from 57 --> 55 rescaling Left_Amygdala from 56 --> 58 rescaling CSF from 32 --> 51 rescaling Left_Accumbens_area from 62 --> 78 rescaling Left_VentralDC from 87 --> 84 rescaling Right_Cerebral_White_Matter from 105 --> 110 rescaling Right_Cerebral_Cortex from 58 --> 85 rescaling Right_Lateral_Ventricle from 13 --> 22 rescaling Right_Inf_Lat_Vent from 25 --> 23 rescaling Right_Cerebellum_White_Matter from 87 --> 82 rescaling Right_Cerebellum_Cortex from 59 --> 56 rescaling Right_Thalamus_Proper from 85 --> 77 rescaling Right_Caudate from 62 --> 87 rescaling Right_Putamen from 80 --> 84 rescaling Right_Pallidum from 97 --> 90 rescaling Right_Hippocampus from 53 --> 54 rescaling Right_Amygdala from 55 --> 51 rescaling Right_Accumbens_area from 65 --> 86 rescaling Right_VentralDC from 86 --> 84 rescaling Fifth_Ventricle from 40 --> 43 rescaling WM_hypointensities from 78 --> 81 rescaling non_WM_hypointensities from 40 --> 46 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 nctx = 368861 Used brute-force search on 0 voxels relabeling unlikely voxels in interior of white matter average std[0] = 7.3 pass 1: 1392 changed. pass 2: 203 changed. pass 3: 52 changed. pass 4: 23 changed. pass 5: 13 changed. pass 6: 5 changed. pass 7: 1 changed. pass 8: 0 changed. nchanged = 0 Writing output aseg to mri/aparc.DKTatlas+aseg.mgz PIDs (81714 81717 81720) completed and logs appended. #----------------------------------------- #@# APas-to-ASeg Thu Feb 11 02:11:32 UTC 2021 /output/january_2021/subject1/mri apas2aseg --i aparc+aseg.mgz --o aseg.mgz Thu Feb 11 02:11:32 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/mri /opt/freesurfer/bin/apas2aseg --i aparc+aseg.mgz --o aseg.mgz freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a $Id: apas2aseg,v 1.2 2016/02/12 21:43:14 zkaufman Exp $ Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux mri_binarize --i aparc+aseg.mgz --o aseg.mgz --replace 1000 3 --replace 2000 42 --replace 1001 3 --replace 2001 42 --replace 1002 3 --replace 2002 42 --replace 1003 3 --replace 2003 42 --replace 1004 3 --replace 2004 42 --replace 1005 3 --replace 2005 42 --replace 1006 3 --replace 2006 42 --replace 1007 3 --replace 2007 42 --replace 1008 3 --replace 2008 42 --replace 1009 3 --replace 2009 42 --replace 1010 3 --replace 2010 42 --replace 1011 3 --replace 2011 42 --replace 1012 3 --replace 2012 42 --replace 1013 3 --replace 2013 42 --replace 1014 3 --replace 2014 42 --replace 1015 3 --replace 2015 42 --replace 1016 3 --replace 2016 42 --replace 1017 3 --replace 2017 42 --replace 1018 3 --replace 2018 42 --replace 1019 3 --replace 2019 42 --replace 1020 3 --replace 2020 42 --replace 1021 3 --replace 2021 42 --replace 1022 3 --replace 2022 42 --replace 1023 3 --replace 2023 42 --replace 1024 3 --replace 2024 42 --replace 1025 3 --replace 2025 42 --replace 1026 3 --replace 2026 42 --replace 1027 3 --replace 2027 42 --replace 1028 3 --replace 2028 42 --replace 1029 3 --replace 2029 42 --replace 1030 3 --replace 2030 42 --replace 1031 3 --replace 2031 42 --replace 1032 3 --replace 2032 42 --replace 1033 3 --replace 2033 42 --replace 1034 3 --replace 2034 42 --replace 1035 3 --replace 2035 42 $Id: mri_binarize.c,v 1.43 2016/06/09 20:46:21 greve Exp $ cwd /output/january_2021/subject1/mri cmdline mri_binarize.bin --i aparc+aseg.mgz --o aseg.mgz --replace 1000 3 --replace 2000 42 --replace 1001 3 --replace 2001 42 --replace 1002 3 --replace 2002 42 --replace 1003 3 --replace 2003 42 --replace 1004 3 --replace 2004 42 --replace 1005 3 --replace 2005 42 --replace 1006 3 --replace 2006 42 --replace 1007 3 --replace 2007 42 --replace 1008 3 --replace 2008 42 --replace 1009 3 --replace 2009 42 --replace 1010 3 --replace 2010 42 --replace 1011 3 --replace 2011 42 --replace 1012 3 --replace 2012 42 --replace 1013 3 --replace 2013 42 --replace 1014 3 --replace 2014 42 --replace 1015 3 --replace 2015 42 --replace 1016 3 --replace 2016 42 --replace 1017 3 --replace 2017 42 --replace 1018 3 --replace 2018 42 --replace 1019 3 --replace 2019 42 --replace 1020 3 --replace 2020 42 --replace 1021 3 --replace 2021 42 --replace 1022 3 --replace 2022 42 --replace 1023 3 --replace 2023 42 --replace 1024 3 --replace 2024 42 --replace 1025 3 --replace 2025 42 --replace 1026 3 --replace 2026 42 --replace 1027 3 --replace 2027 42 --replace 1028 3 --replace 2028 42 --replace 1029 3 --replace 2029 42 --replace 1030 3 --replace 2030 42 --replace 1031 3 --replace 2031 42 --replace 1032 3 --replace 2032 42 --replace 1033 3 --replace 2033 42 --replace 1034 3 --replace 2034 42 --replace 1035 3 --replace 2035 42 sysname Linux hostname 85b04e758063 machine x86_64 user root input aparc+aseg.mgz frame 0 nErode3d 0 nErode2d 0 output aseg.mgz Binarizing based on threshold min -infinity max +infinity binval 1 binvalnot 0 fstart = 0, fend = 0, nframes = 1 Replacing 72 1: 1000 3 2: 2000 42 3: 1001 3 4: 2001 42 5: 1002 3 6: 2002 42 7: 1003 3 8: 2003 42 9: 1004 3 10: 2004 42 11: 1005 3 12: 2005 42 13: 1006 3 14: 2006 42 15: 1007 3 16: 2007 42 17: 1008 3 18: 2008 42 19: 1009 3 20: 2009 42 21: 1010 3 22: 2010 42 23: 1011 3 24: 2011 42 25: 1012 3 26: 2012 42 27: 1013 3 28: 2013 42 29: 1014 3 30: 2014 42 31: 1015 3 32: 2015 42 33: 1016 3 34: 2016 42 35: 1017 3 36: 2017 42 37: 1018 3 38: 2018 42 39: 1019 3 40: 2019 42 41: 1020 3 42: 2020 42 43: 1021 3 44: 2021 42 45: 1022 3 46: 2022 42 47: 1023 3 48: 2023 42 49: 1024 3 50: 2024 42 51: 1025 3 52: 2025 42 53: 1026 3 54: 2026 42 55: 1027 3 56: 2027 42 57: 1028 3 58: 2028 42 59: 1029 3 60: 2029 42 61: 1030 3 62: 2030 42 63: 1031 3 64: 2031 42 65: 1032 3 66: 2032 42 67: 1033 3 68: 2033 42 69: 1034 3 70: 2034 42 71: 1035 3 72: 2035 42 Found 0 values in range Counting number of voxels in first frame Found 0 voxels in final mask Count: 0 0.000000 16777216 0.000000 mri_binarize done Started at Thu Feb 11 02:11:32 UTC 2021 Ended at Thu Feb 11 02:11:38 UTC 2021 Apas2aseg-Run-Time-Sec 6 apas2aseg Done #-------------------------------------------- #@# ASeg Stats Thu Feb 11 02:11:38 UTC 2021 /output/january_2021/subject1 mri_segstats --seg mri/aseg.mgz --sum stats/aseg.stats --pv mri/norm.mgz --empty --brainmask mri/brainmask.mgz --brain-vol-from-seg --excludeid 0 --excl-ctxgmwm --supratent --subcortgray --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --etiv --surf-wm-vol --surf-ctx-vol --totalgray --euler --ctab /opt/freesurfer/ASegStatsLUT.txt --subject subject1 $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ cwd cmdline mri_segstats --seg mri/aseg.mgz --sum stats/aseg.stats --pv mri/norm.mgz --empty --brainmask mri/brainmask.mgz --brain-vol-from-seg --excludeid 0 --excl-ctxgmwm --supratent --subcortgray --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --etiv --surf-wm-vol --surf-ctx-vol --totalgray --euler --ctab /opt/freesurfer/ASegStatsLUT.txt --subject subject1 sysname Linux hostname 85b04e758063 machine x86_64 user root UseRobust 0 atlas_icv (eTIV) = 1642668 mm^3 (det: 1.185940 ) Computing euler number orig.nofix lheno = -258, rheno = -316 orig.nofix lhholes = 130, rhholes = 159 Loading mri/aseg.mgz Getting Brain Volume Statistics lhCtxGM: 190427.402 189675.000 diff= 752.4 pctdiff= 0.395 rhCtxGM: 178076.111 177439.000 diff= 637.1 pctdiff= 0.358 lhCtxWM: 199404.964 197470.500 diff= 1934.5 pctdiff= 0.970 rhCtxWM: 207751.351 212450.500 diff=-4699.1 pctdiff=-2.262 SubCortGMVol 61310.000 SupraTentVol 874938.828 (868100.000) diff=6838.828 pctdiff=0.782 SupraTentVolNotVent 845218.828 (838380.000) diff=6838.828 pctdiff=0.809 BrainSegVol 1025362.000 (1021360.000) diff=4002.000 pctdiff=0.390 BrainSegVolNotVent 989963.000 (988494.828) diff=1468.172 pctdiff=0.148 BrainSegVolNotVent 989963.000 CerebellumVol 151490.000 VentChorVol 29720.000 3rd4th5thCSF 5679.000 CSFVol 1677.000, OptChiasmVol 93.000 MaskVol 1624348.000 Loading mri/norm.mgz Loading mri/norm.mgz Voxel Volume is 1 mm^3 Generating list of segmentation ids Found 50 segmentations Computing statistics for each segmentation Reporting on 45 segmentations Using PrintSegStat mri_segstats done #----------------------------------------- #@# WMParc Thu Feb 11 02:12:25 UTC 2021 /output/january_2021/subject1 mri_aparc2aseg --s subject1 --labelwm --hypo-as-wm --rip-unknown --volmask --o mri/wmparc.mgz --ctxseg aparc+aseg.mgz SUBJECTS_DIR /output/january_2021 subject subject1 outvol mri/wmparc.mgz useribbon 0 baseoffset 0 labeling wm labeling hypo-intensities as wm dmaxctx 5.000000 RipUnknown 1 CtxSeg /output/january_2021/subject1/mri/aparc+aseg.mgz Reading lh white surface /output/january_2021/subject1/surf/lh.white Reading lh pial surface /output/january_2021/subject1/surf/lh.pial Loading lh annotations from /output/january_2021/subject1/label/lh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Reading rh white surface /output/january_2021/subject1/surf/rh.white Reading rh pial surface /output/january_2021/subject1/surf/rh.pial Loading rh annotations from /output/january_2021/subject1/label/rh.aparc.annot reading colortable from annotation file... colortable with 36 entries read (originally /autofs/space/tanha_002/users/greve/fsdev.build/average/colortable_desikan_killiany.txt) Have color table for lh white annotation Have color table for rh white annotation Loading ribbon segmentation from /output/january_2021/subject1/mri/ribbon.mgz Loading filled from /output/january_2021/subject1/mri/ribbon.mgz Ripping vertices labeled as unkown Ripped 9465 vertices from left hemi Ripped 11173 vertices from right hemi Building hash of lh white Building hash of lh pial Building hash of rh white Building hash of rh pial Loading aseg from /output/january_2021/subject1/mri/aseg.mgz Loading Ctx Seg File /output/january_2021/subject1/mri/aparc+aseg.mgz ASeg Vox2RAS: ----------- -1.00000 0.00000 0.00000 128.00000; 0.00000 0.00000 1.00000 -128.00000; 0.00000 -1.00000 0.00000 128.00000; 0.00000 0.00000 0.00000 1.00000; ------------------------- Labeling Slice 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 nctx = 777125 Used brute-force search on 93 voxels Fixing Parahip LH WM Found 15 clusters 0 k 3.000000 1 k 1.000000 2 k 1.000000 3 k 114.000000 4 k 6.000000 5 k 2.000000 6 k 1.000000 7 k 5.000000 8 k 1.000000 9 k 1.000000 10 k 1.000000 11 k 2.000000 12 k 1.000000 13 k 1.000000 14 k 208.000000 Fixing Parahip RH WM Found 0 clusters Writing output aseg to mri/wmparc.mgz mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject subject1 --surf-wm-vol --ctab /opt/freesurfer/WMParcStatsLUT.txt --etiv $Id: mri_segstats.c,v 1.121 2016/05/31 17:27:11 greve Exp $ cwd cmdline mri_segstats --seg mri/wmparc.mgz --sum stats/wmparc.stats --pv mri/norm.mgz --excludeid 0 --brainmask mri/brainmask.mgz --in mri/norm.mgz --in-intensity-name norm --in-intensity-units MR --subject subject1 --surf-wm-vol --ctab /opt/freesurfer/WMParcStatsLUT.txt --etiv sysname Linux hostname 85b04e758063 machine x86_64 user root UseRobust 0 atlas_icv (eTIV) = 1642668 mm^3 (det: 1.185940 ) Loading mri/wmparc.mgz Getting Brain Volume Statistics lhCtxGM: 190427.402 189675.000 diff= 752.4 pctdiff= 0.395 rhCtxGM: 178076.111 177439.000 diff= 637.1 pctdiff= 0.358 lhCtxWM: 199404.964 197470.500 diff= 1934.5 pctdiff= 0.970 rhCtxWM: 207751.351 212450.500 diff=-4699.1 pctdiff=-2.262 SubCortGMVol 61310.000 SupraTentVol 874938.828 (868100.000) diff=6838.828 pctdiff=0.782 SupraTentVolNotVent 845218.828 (838380.000) diff=6838.828 pctdiff=0.809 BrainSegVol 1025362.000 (1021360.000) diff=4002.000 pctdiff=0.390 BrainSegVolNotVent 989963.000 (988494.828) diff=1468.172 pctdiff=0.148 BrainSegVolNotVent 989963.000 CerebellumVol 151490.000 VentChorVol 29720.000 3rd4th5thCSF 5679.000 CSFVol 1677.000, OptChiasmVol 93.000 MaskVol 1624348.000 Loading mri/norm.mgz Loading mri/norm.mgz Voxel Volume is 1 mm^3 Generating list of segmentation ids Found 390 segmentations Computing statistics for each segmentation Reporting on 69 segmentations Using PrintSegStat mri_segstats done /output/january_2021/subject1/label #-------------------------------------------- #@# BA_exvivo Labels lh Thu Feb 11 02:18:17 UTC 2021 mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA1_exvivo.label --trgsubject subject1 --trglabel ./lh.BA1_exvivo.label --hemi lh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA2_exvivo.label --trgsubject subject1 --trglabel ./lh.BA2_exvivo.label --hemi lh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA3a_exvivo.label --trgsubject subject1 --trglabel ./lh.BA3a_exvivo.label --hemi lh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA3b_exvivo.label --trgsubject subject1 --trglabel ./lh.BA3b_exvivo.label --hemi lh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA4a_exvivo.label --trgsubject subject1 --trglabel ./lh.BA4a_exvivo.label --hemi lh --regmethod surface Waiting for PID 1592 of (1592 1597 1603 1607 1614) to complete... Waiting for PID 1597 of (1592 1597 1603 1607 1614) to complete... Waiting for PID 1603 of (1592 1597 1603 1607 1614) to complete... Waiting for PID 1607 of (1592 1597 1603 1607 1614) to complete... Waiting for PID 1614 of (1592 1597 1603 1607 1614) to complete... mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA1_exvivo.label --trgsubject subject1 --trglabel ./lh.BA1_exvivo.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.BA1_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.BA1_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 4129 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 4129 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 219 Checking for and removing duplicates Writing label file ./lh.BA1_exvivo.label 4348 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA2_exvivo.label --trgsubject subject1 --trglabel ./lh.BA2_exvivo.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.BA2_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.BA2_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 7909 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 7909 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 1373 Checking for and removing duplicates Writing label file ./lh.BA2_exvivo.label 9282 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA3a_exvivo.label --trgsubject subject1 --trglabel ./lh.BA3a_exvivo.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.BA3a_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.BA3a_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 4077 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 4077 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 238 Checking for and removing duplicates Writing label file ./lh.BA3a_exvivo.label 4315 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA3b_exvivo.label --trgsubject subject1 --trglabel ./lh.BA3b_exvivo.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.BA3b_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.BA3b_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 5983 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 5983 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 462 Checking for and removing duplicates Writing label file ./lh.BA3b_exvivo.label 6445 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA4a_exvivo.label --trgsubject subject1 --trglabel ./lh.BA4a_exvivo.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.BA4a_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.BA4a_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 5784 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 5784 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 483 Checking for and removing duplicates Writing label file ./lh.BA4a_exvivo.label 6267 mri_label2label: Done PIDs (1592 1597 1603 1607 1614) completed and logs appended. mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA4p_exvivo.label --trgsubject subject1 --trglabel ./lh.BA4p_exvivo.label --hemi lh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA6_exvivo.label --trgsubject subject1 --trglabel ./lh.BA6_exvivo.label --hemi lh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA44_exvivo.label --trgsubject subject1 --trglabel ./lh.BA44_exvivo.label --hemi lh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA45_exvivo.label --trgsubject subject1 --trglabel ./lh.BA45_exvivo.label --hemi lh --regmethod surface Waiting for PID 1679 of (1679 1683 1690 1696) to complete... Waiting for PID 1683 of (1679 1683 1690 1696) to complete... Waiting for PID 1690 of (1679 1683 1690 1696) to complete... Waiting for PID 1696 of (1679 1683 1690 1696) to complete... mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA4p_exvivo.label --trgsubject subject1 --trglabel ./lh.BA4p_exvivo.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.BA4p_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.BA4p_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 4070 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 4070 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 217 Checking for and removing duplicates Writing label file ./lh.BA4p_exvivo.label 4287 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA6_exvivo.label --trgsubject subject1 --trglabel ./lh.BA6_exvivo.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.BA6_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.BA6_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 13589 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 13589 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 1506 Checking for and removing duplicates Writing label file ./lh.BA6_exvivo.label 15095 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA44_exvivo.label --trgsubject subject1 --trglabel ./lh.BA44_exvivo.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.BA44_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.BA44_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 4181 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 4181 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 329 Checking for and removing duplicates Writing label file ./lh.BA44_exvivo.label 4510 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA45_exvivo.label --trgsubject subject1 --trglabel ./lh.BA45_exvivo.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.BA45_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.BA45_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 3422 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 3422 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 349 Checking for and removing duplicates Writing label file ./lh.BA45_exvivo.label 3771 mri_label2label: Done PIDs (1679 1683 1690 1696) completed and logs appended. mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.V1_exvivo.label --trgsubject subject1 --trglabel ./lh.V1_exvivo.label --hemi lh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.V2_exvivo.label --trgsubject subject1 --trglabel ./lh.V2_exvivo.label --hemi lh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.MT_exvivo.label --trgsubject subject1 --trglabel ./lh.MT_exvivo.label --hemi lh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.entorhinal_exvivo.label --trgsubject subject1 --trglabel ./lh.entorhinal_exvivo.label --hemi lh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.perirhinal_exvivo.label --trgsubject subject1 --trglabel ./lh.perirhinal_exvivo.label --hemi lh --regmethod surface Waiting for PID 1760 of (1760 1765 1770 1777 1783) to complete... Waiting for PID 1765 of (1760 1765 1770 1777 1783) to complete... Waiting for PID 1770 of (1760 1765 1770 1777 1783) to complete... Waiting for PID 1777 of (1760 1765 1770 1777 1783) to complete... Waiting for PID 1783 of (1760 1765 1770 1777 1783) to complete... mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.V1_exvivo.label --trgsubject subject1 --trglabel ./lh.V1_exvivo.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.V1_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.V1_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 4641 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 4641 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 393 Checking for and removing duplicates Writing label file ./lh.V1_exvivo.label 5034 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.V2_exvivo.label --trgsubject subject1 --trglabel ./lh.V2_exvivo.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.V2_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.V2_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 8114 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 8114 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 971 Checking for and removing duplicates Writing label file ./lh.V2_exvivo.label 9085 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.MT_exvivo.label --trgsubject subject1 --trglabel ./lh.MT_exvivo.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.MT_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.MT_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 2018 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 2018 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 317 Checking for and removing duplicates Writing label file ./lh.MT_exvivo.label 2335 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.entorhinal_exvivo.label --trgsubject subject1 --trglabel ./lh.entorhinal_exvivo.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.entorhinal_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.entorhinal_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 1290 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1290 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 273 Checking for and removing duplicates Writing label file ./lh.entorhinal_exvivo.label 1563 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.perirhinal_exvivo.label --trgsubject subject1 --trglabel ./lh.perirhinal_exvivo.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.perirhinal_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.perirhinal_exvivo.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 1199 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1199 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 184 Checking for and removing duplicates Writing label file ./lh.perirhinal_exvivo.label 1383 mri_label2label: Done PIDs (1760 1765 1770 1777 1783) completed and logs appended. mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA1_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.BA1_exvivo.thresh.label --hemi lh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA2_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.BA2_exvivo.thresh.label --hemi lh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA3a_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.BA3a_exvivo.thresh.label --hemi lh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA3b_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.BA3b_exvivo.thresh.label --hemi lh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA4a_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.BA4a_exvivo.thresh.label --hemi lh --regmethod surface Waiting for PID 1852 of (1852 1856 1863 1869 1875) to complete... Waiting for PID 1856 of (1852 1856 1863 1869 1875) to complete... Waiting for PID 1863 of (1852 1856 1863 1869 1875) to complete... Waiting for PID 1869 of (1852 1856 1863 1869 1875) to complete... Waiting for PID 1875 of (1852 1856 1863 1869 1875) to complete... mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA1_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.BA1_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.BA1_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.BA1_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 1014 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1014 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 30 Checking for and removing duplicates Writing label file ./lh.BA1_exvivo.thresh.label 1044 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA2_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.BA2_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.BA2_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.BA2_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 2092 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 2092 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 127 Checking for and removing duplicates Writing label file ./lh.BA2_exvivo.thresh.label 2219 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA3a_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.BA3a_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.BA3a_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.BA3a_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 1504 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1504 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 86 Checking for and removing duplicates Writing label file ./lh.BA3a_exvivo.thresh.label 1590 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA3b_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.BA3b_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.BA3b_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.BA3b_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 1996 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1996 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 151 Checking for and removing duplicates Writing label file ./lh.BA3b_exvivo.thresh.label 2147 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA4a_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.BA4a_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.BA4a_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.BA4a_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 2319 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 2319 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 223 Checking for and removing duplicates Writing label file ./lh.BA4a_exvivo.thresh.label 2542 mri_label2label: Done PIDs (1852 1856 1863 1869 1875) completed and logs appended. mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA4p_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.BA4p_exvivo.thresh.label --hemi lh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA6_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.BA6_exvivo.thresh.label --hemi lh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA44_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.BA44_exvivo.thresh.label --hemi lh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA45_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.BA45_exvivo.thresh.label --hemi lh --regmethod surface Waiting for PID 1937 of (1937 1942 1946 1954) to complete... Waiting for PID 1942 of (1937 1942 1946 1954) to complete... Waiting for PID 1946 of (1937 1942 1946 1954) to complete... Waiting for PID 1954 of (1937 1942 1946 1954) to complete... mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA4p_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.BA4p_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.BA4p_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.BA4p_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 1549 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1549 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 123 Checking for and removing duplicates Writing label file ./lh.BA4p_exvivo.thresh.label 1672 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA6_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.BA6_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.BA6_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.BA6_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 7035 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 7035 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 713 Checking for and removing duplicates Writing label file ./lh.BA6_exvivo.thresh.label 7748 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA44_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.BA44_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.BA44_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.BA44_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 1912 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1912 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 217 Checking for and removing duplicates Writing label file ./lh.BA44_exvivo.thresh.label 2129 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.BA45_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.BA45_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.BA45_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.BA45_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 1151 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1151 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 152 Checking for and removing duplicates Writing label file ./lh.BA45_exvivo.thresh.label 1303 mri_label2label: Done PIDs (1937 1942 1946 1954) completed and logs appended. mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.V1_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.V1_exvivo.thresh.label --hemi lh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.V2_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.V2_exvivo.thresh.label --hemi lh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.MT_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.MT_exvivo.thresh.label --hemi lh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.entorhinal_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.entorhinal_exvivo.thresh.label --hemi lh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.perirhinal_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.perirhinal_exvivo.thresh.label --hemi lh --regmethod surface Waiting for PID 2016 of (2016 2021 2027 2033 2039) to complete... Waiting for PID 2021 of (2016 2021 2027 2033 2039) to complete... Waiting for PID 2027 of (2016 2021 2027 2033 2039) to complete... Waiting for PID 2033 of (2016 2021 2027 2033 2039) to complete... Waiting for PID 2039 of (2016 2021 2027 2033 2039) to complete... mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.V1_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.V1_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.V1_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.V1_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 3405 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 3405 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 282 Checking for and removing duplicates Writing label file ./lh.V1_exvivo.thresh.label 3687 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.V2_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.V2_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.V2_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.V2_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 3334 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 3334 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 387 Checking for and removing duplicates Writing label file ./lh.V2_exvivo.thresh.label 3721 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.MT_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.MT_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.MT_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.MT_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 513 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 513 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 53 Checking for and removing duplicates Writing label file ./lh.MT_exvivo.thresh.label 566 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.entorhinal_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.entorhinal_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.entorhinal_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.entorhinal_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 470 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 470 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 94 Checking for and removing duplicates Writing label file ./lh.entorhinal_exvivo.thresh.label 564 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/lh.perirhinal_exvivo.thresh.label --trgsubject subject1 --trglabel ./lh.perirhinal_exvivo.thresh.label --hemi lh --regmethod surface srclabel = /output/january_2021/fsaverage/label/lh.perirhinal_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./lh.perirhinal_exvivo.thresh.label regmethod = surface srchemi = lh trghemi = lh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 450 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/lh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/lh.white Reading target registration /output/january_2021/subject1/surf/lh.sphere.reg Rescaling ... original radius = 100 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 450 nlabel points Performing mapping from target back to the source label 117888 Number of reverse mapping hits = 66 Checking for and removing duplicates Writing label file ./lh.perirhinal_exvivo.thresh.label 516 mri_label2label: Done PIDs (2016 2021 2027 2033 2039) completed and logs appended. mris_label2annot --s subject1 --hemi lh --ctab /opt/freesurfer/average/colortable_BA.txt --l lh.BA1_exvivo.label --l lh.BA2_exvivo.label --l lh.BA3a_exvivo.label --l lh.BA3b_exvivo.label --l lh.BA4a_exvivo.label --l lh.BA4p_exvivo.label --l lh.BA6_exvivo.label --l lh.BA44_exvivo.label --l lh.BA45_exvivo.label --l lh.V1_exvivo.label --l lh.V2_exvivo.label --l lh.MT_exvivo.label --l lh.entorhinal_exvivo.label --l lh.perirhinal_exvivo.label --a BA_exvivo --maxstatwinner --noverbose Reading ctab /opt/freesurfer/average/colortable_BA.txt Number of ctab entries 15 $Id: mris_label2annot.c,v 1.20 2016/01/07 23:28:11 greve Exp $ cwd /output/january_2021/subject1/label cmdline mris_label2annot --s subject1 --hemi lh --ctab /opt/freesurfer/average/colortable_BA.txt --l lh.BA1_exvivo.label --l lh.BA2_exvivo.label --l lh.BA3a_exvivo.label --l lh.BA3b_exvivo.label --l lh.BA4a_exvivo.label --l lh.BA4p_exvivo.label --l lh.BA6_exvivo.label --l lh.BA44_exvivo.label --l lh.BA45_exvivo.label --l lh.V1_exvivo.label --l lh.V2_exvivo.label --l lh.MT_exvivo.label --l lh.entorhinal_exvivo.label --l lh.perirhinal_exvivo.label --a BA_exvivo --maxstatwinner --noverbose sysname Linux hostname 85b04e758063 machine x86_64 user root subject subject1 hemi lh SUBJECTS_DIR /output/january_2021 ColorTable /opt/freesurfer/average/colortable_BA.txt AnnotName BA_exvivo nlables 14 LabelThresh 0 0.000000 Loading /output/january_2021/subject1/surf/lh.orig 1 1530880 BA1_exvivo 2 16749699 BA2_exvivo 3 16711680 BA3a_exvivo 4 3368703 BA3b_exvivo 5 1376196 BA4a_exvivo 6 13382655 BA4p_exvivo 7 10036737 BA6_exvivo 8 2490521 BA44_exvivo 9 39283 BA45_exvivo 10 3993 V1_exvivo 11 8508928 V2_exvivo 12 10027163 MT_exvivo 13 16422433 perirhinal_exvivo 14 16392598 entorhinal_exvivo Mapping unhit to unknown Found 82031 unhit vertices Writing annot to /output/january_2021/subject1/label/lh.BA_exvivo.annot mris_label2annot --s subject1 --hemi lh --ctab /opt/freesurfer/average/colortable_BA.txt --l lh.BA1_exvivo.thresh.label --l lh.BA2_exvivo.thresh.label --l lh.BA3a_exvivo.thresh.label --l lh.BA3b_exvivo.thresh.label --l lh.BA4a_exvivo.thresh.label --l lh.BA4p_exvivo.thresh.label --l lh.BA6_exvivo.thresh.label --l lh.BA44_exvivo.thresh.label --l lh.BA45_exvivo.thresh.label --l lh.V1_exvivo.thresh.label --l lh.V2_exvivo.thresh.label --l lh.MT_exvivo.thresh.label --l lh.entorhinal_exvivo.thresh.label --l lh.perirhinal_exvivo.thresh.label --a BA_exvivo.thresh --maxstatwinner --noverbose Reading ctab /opt/freesurfer/average/colortable_BA.txt Number of ctab entries 15 $Id: mris_label2annot.c,v 1.20 2016/01/07 23:28:11 greve Exp $ cwd /output/january_2021/subject1/label cmdline mris_label2annot --s subject1 --hemi lh --ctab /opt/freesurfer/average/colortable_BA.txt --l lh.BA1_exvivo.thresh.label --l lh.BA2_exvivo.thresh.label --l lh.BA3a_exvivo.thresh.label --l lh.BA3b_exvivo.thresh.label --l lh.BA4a_exvivo.thresh.label --l lh.BA4p_exvivo.thresh.label --l lh.BA6_exvivo.thresh.label --l lh.BA44_exvivo.thresh.label --l lh.BA45_exvivo.thresh.label --l lh.V1_exvivo.thresh.label --l lh.V2_exvivo.thresh.label --l lh.MT_exvivo.thresh.label --l lh.entorhinal_exvivo.thresh.label --l lh.perirhinal_exvivo.thresh.label --a BA_exvivo.thresh --maxstatwinner --noverbose sysname Linux hostname 85b04e758063 machine x86_64 user root subject subject1 hemi lh SUBJECTS_DIR /output/january_2021 ColorTable /opt/freesurfer/average/colortable_BA.txt AnnotName BA_exvivo.thresh nlables 14 LabelThresh 0 0.000000 Loading /output/january_2021/subject1/surf/lh.orig 1 1530880 BA1_exvivo 2 16749699 BA2_exvivo 3 16711680 BA3a_exvivo 4 3368703 BA3b_exvivo 5 1376196 BA4a_exvivo 6 13382655 BA4p_exvivo 7 10036737 BA6_exvivo 8 2490521 BA44_exvivo 9 39283 BA45_exvivo 10 3993 V1_exvivo 11 8508928 V2_exvivo 12 10027163 MT_exvivo 13 16422433 perirhinal_exvivo 14 16392598 entorhinal_exvivo Mapping unhit to unknown Found 97588 unhit vertices Writing annot to /output/january_2021/subject1/label/lh.BA_exvivo.thresh.annot mris_anatomical_stats -th3 -mgz -f ../stats/lh.BA_exvivo.stats -b -a ./lh.BA_exvivo.annot -c ./BA_exvivo.ctab subject1 lh white computing statistics for each annotation in ./lh.BA_exvivo.annot. reading volume /output/january_2021/subject1/mri/wm.mgz... reading input surface /output/january_2021/subject1/surf/lh.white... reading input pial surface /output/january_2021/subject1/surf/lh.pial... reading input white surface /output/january_2021/subject1/surf/lh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. Using TH3 vertex volume calc Total face volume 199536 Total vertex volume 195611 (mask=0) reading colortable from annotation file... colortable with 15 entries read (originally /opt/freesurfer/average/colortable_BA.txt) Saving annotation colortable ./BA_exvivo.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1642668 mm^3 (det: 1.185940 ) lhCtxGM: 190427.402 189675.000 diff= 752.4 pctdiff= 0.395 rhCtxGM: 178076.111 177439.000 diff= 637.1 pctdiff= 0.358 lhCtxWM: 199404.964 197470.500 diff= 1934.5 pctdiff= 0.970 rhCtxWM: 207751.351 212450.500 diff=-4699.1 pctdiff=-2.262 SubCortGMVol 61310.000 SupraTentVol 874938.828 (868100.000) diff=6838.828 pctdiff=0.782 SupraTentVolNotVent 845218.828 (838380.000) diff=6838.828 pctdiff=0.809 BrainSegVol 1025362.000 (1021360.000) diff=4002.000 pctdiff=0.390 BrainSegVolNotVent 989963.000 (988494.828) diff=1468.172 pctdiff=0.148 BrainSegVolNotVent 989963.000 CerebellumVol 151490.000 VentChorVol 29720.000 3rd4th5thCSF 5679.000 CSFVol 1677.000, OptChiasmVol 93.000 MaskVol 1624348.000 1011 483 1646 2.621 0.657 0.103 0.033 8 1.4 BA1_exvivo 4880 3197 6563 1.992 0.707 0.116 0.028 43 6.1 BA2_exvivo 988 632 1221 2.190 0.616 0.142 0.035 13 1.6 BA3a_exvivo 2393 1329 3698 2.354 0.694 0.105 0.028 21 3.1 BA3b_exvivo 1795 951 2914 2.593 0.426 0.101 0.027 12 2.0 BA4a_exvivo 1170 700 1566 2.330 0.552 0.119 0.028 11 1.4 BA4p_exvivo 9407 5643 16343 2.676 0.455 0.112 0.026 82 10.1 BA6_exvivo 2203 1357 4443 2.627 0.639 0.126 0.037 32 3.4 BA44_exvivo 2378 1562 4489 2.503 0.408 0.130 0.032 30 3.0 BA45_exvivo 2095 1533 3090 1.965 0.610 0.164 0.053 44 5.4 V1_exvivo 4654 3305 7530 2.024 0.664 0.149 0.050 75 9.8 V2_exvivo 1428 1006 2407 2.229 0.555 0.157 0.054 26 3.5 MT_exvivo 715 433 1609 2.665 1.036 0.147 0.058 13 1.6 perirhinal_exvivo 740 528 2730 3.265 0.879 0.152 0.047 14 1.2 entorhinal_exvivo mris_anatomical_stats -th3 -mgz -f ../stats/lh.BA_exvivo.thresh.stats -b -a ./lh.BA_exvivo.thresh.annot -c ./BA_exvivo.thresh.ctab subject1 lh white computing statistics for each annotation in ./lh.BA_exvivo.thresh.annot. reading volume /output/january_2021/subject1/mri/wm.mgz... reading input surface /output/january_2021/subject1/surf/lh.white... reading input pial surface /output/january_2021/subject1/surf/lh.pial... reading input white surface /output/january_2021/subject1/surf/lh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. Using TH3 vertex volume calc Total face volume 199536 Total vertex volume 195611 (mask=0) reading colortable from annotation file... colortable with 15 entries read (originally /opt/freesurfer/average/colortable_BA.txt) Saving annotation colortable ./BA_exvivo.thresh.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1642668 mm^3 (det: 1.185940 ) lhCtxGM: 190427.402 189675.000 diff= 752.4 pctdiff= 0.395 rhCtxGM: 178076.111 177439.000 diff= 637.1 pctdiff= 0.358 lhCtxWM: 199404.964 197470.500 diff= 1934.5 pctdiff= 0.970 rhCtxWM: 207751.351 212450.500 diff=-4699.1 pctdiff=-2.262 SubCortGMVol 61310.000 SupraTentVol 874938.828 (868100.000) diff=6838.828 pctdiff=0.782 SupraTentVolNotVent 845218.828 (838380.000) diff=6838.828 pctdiff=0.809 BrainSegVol 1025362.000 (1021360.000) diff=4002.000 pctdiff=0.390 BrainSegVolNotVent 989963.000 (988494.828) diff=1468.172 pctdiff=0.148 BrainSegVolNotVent 989963.000 CerebellumVol 151490.000 VentChorVol 29720.000 3rd4th5thCSF 5679.000 CSFVol 1677.000, OptChiasmVol 93.000 MaskVol 1624348.000 546 239 905 2.849 0.613 0.111 0.041 6 1.0 BA1_exvivo 1450 1050 1839 1.863 0.691 0.124 0.028 10 2.0 BA2_exvivo 837 563 991 2.122 0.581 0.150 0.036 11 1.4 BA3a_exvivo 1385 764 1820 2.216 0.538 0.098 0.023 11 1.6 BA3b_exvivo 1649 876 2634 2.581 0.456 0.102 0.028 12 1.9 BA4a_exvivo 980 588 1382 2.417 0.613 0.116 0.029 9 1.1 BA4p_exvivo 5274 3080 9392 2.745 0.468 0.106 0.024 40 5.4 BA6_exvivo 1493 914 2914 2.610 0.583 0.131 0.040 25 2.6 BA44_exvivo 1042 687 2090 2.482 0.407 0.128 0.031 12 1.3 BA45_exvivo 2169 1573 3180 1.972 0.590 0.159 0.051 44 5.4 V1_exvivo 2394 1679 4015 2.046 0.668 0.144 0.042 34 4.8 V2_exvivo 312 272 731 2.491 0.539 0.177 0.046 4 0.7 MT_exvivo 375 235 697 2.310 0.832 0.130 0.053 4 0.7 perirhinal_exvivo 394 298 1139 2.949 0.917 0.143 0.041 5 0.6 entorhinal_exvivo #-------------------------------------------- #@# BA_exvivo Labels rh Thu Feb 11 02:19:50 UTC 2021 mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA1_exvivo.label --trgsubject subject1 --trglabel ./rh.BA1_exvivo.label --hemi rh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA2_exvivo.label --trgsubject subject1 --trglabel ./rh.BA2_exvivo.label --hemi rh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA3a_exvivo.label --trgsubject subject1 --trglabel ./rh.BA3a_exvivo.label --hemi rh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA3b_exvivo.label --trgsubject subject1 --trglabel ./rh.BA3b_exvivo.label --hemi rh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA4a_exvivo.label --trgsubject subject1 --trglabel ./rh.BA4a_exvivo.label --hemi rh --regmethod surface Waiting for PID 2218 of (2218 2223 2228 2235 2242) to complete... Waiting for PID 2223 of (2218 2223 2228 2235 2242) to complete... Waiting for PID 2228 of (2218 2223 2228 2235 2242) to complete... Waiting for PID 2235 of (2218 2223 2228 2235 2242) to complete... Waiting for PID 2242 of (2218 2223 2228 2235 2242) to complete... mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA1_exvivo.label --trgsubject subject1 --trglabel ./rh.BA1_exvivo.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.BA1_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.BA1_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 3962 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 3962 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 484 Checking for and removing duplicates Writing label file ./rh.BA1_exvivo.label 4446 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA2_exvivo.label --trgsubject subject1 --trglabel ./rh.BA2_exvivo.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.BA2_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.BA2_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 6687 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 6687 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 904 Checking for and removing duplicates Writing label file ./rh.BA2_exvivo.label 7591 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA3a_exvivo.label --trgsubject subject1 --trglabel ./rh.BA3a_exvivo.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.BA3a_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.BA3a_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 3980 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 3980 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 487 Checking for and removing duplicates Writing label file ./rh.BA3a_exvivo.label 4467 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA3b_exvivo.label --trgsubject subject1 --trglabel ./rh.BA3b_exvivo.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.BA3b_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.BA3b_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 4522 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 4522 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 577 Checking for and removing duplicates Writing label file ./rh.BA3b_exvivo.label 5099 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA4a_exvivo.label --trgsubject subject1 --trglabel ./rh.BA4a_exvivo.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.BA4a_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.BA4a_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 5747 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 5747 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 860 Checking for and removing duplicates Writing label file ./rh.BA4a_exvivo.label 6607 mri_label2label: Done PIDs (2218 2223 2228 2235 2242) completed and logs appended. mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA4p_exvivo.label --trgsubject subject1 --trglabel ./rh.BA4p_exvivo.label --hemi rh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA6_exvivo.label --trgsubject subject1 --trglabel ./rh.BA6_exvivo.label --hemi rh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA44_exvivo.label --trgsubject subject1 --trglabel ./rh.BA44_exvivo.label --hemi rh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA45_exvivo.label --trgsubject subject1 --trglabel ./rh.BA45_exvivo.label --hemi rh --regmethod surface Waiting for PID 2309 of (2309 2314 2320 2325) to complete... Waiting for PID 2314 of (2309 2314 2320 2325) to complete... Waiting for PID 2320 of (2309 2314 2320 2325) to complete... Waiting for PID 2325 of (2309 2314 2320 2325) to complete... mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA4p_exvivo.label --trgsubject subject1 --trglabel ./rh.BA4p_exvivo.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.BA4p_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.BA4p_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 4473 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 4473 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 581 Checking for and removing duplicates Writing label file ./rh.BA4p_exvivo.label 5054 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA6_exvivo.label --trgsubject subject1 --trglabel ./rh.BA6_exvivo.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.BA6_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.BA6_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 12256 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 12256 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 1262 Checking for and removing duplicates Writing label file ./rh.BA6_exvivo.label 13518 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA44_exvivo.label --trgsubject subject1 --trglabel ./rh.BA44_exvivo.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.BA44_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.BA44_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 6912 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 6912 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 246 Checking for and removing duplicates Writing label file ./rh.BA44_exvivo.label 7158 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA45_exvivo.label --trgsubject subject1 --trglabel ./rh.BA45_exvivo.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.BA45_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.BA45_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 5355 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 5355 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 556 Checking for and removing duplicates Writing label file ./rh.BA45_exvivo.label 5911 mri_label2label: Done PIDs (2309 2314 2320 2325) completed and logs appended. mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.V1_exvivo.label --trgsubject subject1 --trglabel ./rh.V1_exvivo.label --hemi rh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.V2_exvivo.label --trgsubject subject1 --trglabel ./rh.V2_exvivo.label --hemi rh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.MT_exvivo.label --trgsubject subject1 --trglabel ./rh.MT_exvivo.label --hemi rh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.entorhinal_exvivo.label --trgsubject subject1 --trglabel ./rh.entorhinal_exvivo.label --hemi rh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.perirhinal_exvivo.label --trgsubject subject1 --trglabel ./rh.perirhinal_exvivo.label --hemi rh --regmethod surface Waiting for PID 2392 of (2392 2397 2401 2409 2415) to complete... Waiting for PID 2397 of (2392 2397 2401 2409 2415) to complete... Waiting for PID 2401 of (2392 2397 2401 2409 2415) to complete... Waiting for PID 2409 of (2392 2397 2401 2409 2415) to complete... Waiting for PID 2415 of (2392 2397 2401 2409 2415) to complete... mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.V1_exvivo.label --trgsubject subject1 --trglabel ./rh.V1_exvivo.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.V1_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.V1_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 4727 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 4727 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 1258 Checking for and removing duplicates Writing label file ./rh.V1_exvivo.label 5985 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.V2_exvivo.label --trgsubject subject1 --trglabel ./rh.V2_exvivo.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.V2_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.V2_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 8016 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 8016 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 2336 Checking for and removing duplicates Writing label file ./rh.V2_exvivo.label 10352 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.MT_exvivo.label --trgsubject subject1 --trglabel ./rh.MT_exvivo.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.MT_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.MT_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 1932 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1932 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 492 Checking for and removing duplicates Writing label file ./rh.MT_exvivo.label 2424 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.entorhinal_exvivo.label --trgsubject subject1 --trglabel ./rh.entorhinal_exvivo.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.entorhinal_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.entorhinal_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 1038 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1038 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 93 Checking for and removing duplicates Writing label file ./rh.entorhinal_exvivo.label 1131 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.perirhinal_exvivo.label --trgsubject subject1 --trglabel ./rh.perirhinal_exvivo.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.perirhinal_exvivo.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.perirhinal_exvivo.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 752 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 752 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 60 Checking for and removing duplicates Writing label file ./rh.perirhinal_exvivo.label 812 mri_label2label: Done PIDs (2392 2397 2401 2409 2415) completed and logs appended. mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA1_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.BA1_exvivo.thresh.label --hemi rh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA2_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.BA2_exvivo.thresh.label --hemi rh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA3a_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.BA3a_exvivo.thresh.label --hemi rh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA3b_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.BA3b_exvivo.thresh.label --hemi rh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA4a_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.BA4a_exvivo.thresh.label --hemi rh --regmethod surface Waiting for PID 2484 of (2484 2489 2495 2499 2508) to complete... Waiting for PID 2489 of (2484 2489 2495 2499 2508) to complete... Waiting for PID 2495 of (2484 2489 2495 2499 2508) to complete... Waiting for PID 2499 of (2484 2489 2495 2499 2508) to complete... Waiting for PID 2508 of (2484 2489 2495 2499 2508) to complete... mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA1_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.BA1_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.BA1_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.BA1_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 876 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 876 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 181 Checking for and removing duplicates Writing label file ./rh.BA1_exvivo.thresh.label 1057 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA2_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.BA2_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.BA2_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.BA2_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 2688 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 2688 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 314 Checking for and removing duplicates Writing label file ./rh.BA2_exvivo.thresh.label 3002 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA3a_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.BA3a_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.BA3a_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.BA3a_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 1698 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1698 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 257 Checking for and removing duplicates Writing label file ./rh.BA3a_exvivo.thresh.label 1955 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA3b_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.BA3b_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.BA3b_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.BA3b_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 2183 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 2183 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 314 Checking for and removing duplicates Writing label file ./rh.BA3b_exvivo.thresh.label 2497 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA4a_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.BA4a_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.BA4a_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.BA4a_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 1388 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1388 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 233 Checking for and removing duplicates Writing label file ./rh.BA4a_exvivo.thresh.label 1621 mri_label2label: Done PIDs (2484 2489 2495 2499 2508) completed and logs appended. mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA4p_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.BA4p_exvivo.thresh.label --hemi rh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA6_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.BA6_exvivo.thresh.label --hemi rh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA44_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.BA44_exvivo.thresh.label --hemi rh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA45_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.BA45_exvivo.thresh.label --hemi rh --regmethod surface Waiting for PID 2571 of (2571 2576 2580 2588) to complete... Waiting for PID 2576 of (2571 2576 2580 2588) to complete... Waiting for PID 2580 of (2571 2576 2580 2588) to complete... Waiting for PID 2588 of (2571 2576 2580 2588) to complete... mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA4p_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.BA4p_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.BA4p_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.BA4p_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 1489 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1489 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 175 Checking for and removing duplicates Writing label file ./rh.BA4p_exvivo.thresh.label 1664 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA6_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.BA6_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.BA6_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.BA6_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 6959 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 6959 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 677 Checking for and removing duplicates Writing label file ./rh.BA6_exvivo.thresh.label 7636 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA44_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.BA44_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.BA44_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.BA44_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 1012 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1012 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 30 Checking for and removing duplicates Writing label file ./rh.BA44_exvivo.thresh.label 1042 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.BA45_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.BA45_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.BA45_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.BA45_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 1178 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 1178 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 106 Checking for and removing duplicates Writing label file ./rh.BA45_exvivo.thresh.label 1284 mri_label2label: Done PIDs (2571 2576 2580 2588) completed and logs appended. mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.V1_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.V1_exvivo.thresh.label --hemi rh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.V2_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.V2_exvivo.thresh.label --hemi rh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.MT_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.MT_exvivo.thresh.label --hemi rh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.entorhinal_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.entorhinal_exvivo.thresh.label --hemi rh --regmethod surface mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.perirhinal_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.perirhinal_exvivo.thresh.label --hemi rh --regmethod surface Waiting for PID 2652 of (2652 2657 2661 2669 2675) to complete... Waiting for PID 2657 of (2652 2657 2661 2669 2675) to complete... Waiting for PID 2661 of (2652 2657 2661 2669 2675) to complete... Waiting for PID 2669 of (2652 2657 2661 2669 2675) to complete... Waiting for PID 2675 of (2652 2657 2661 2669 2675) to complete... mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.V1_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.V1_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.V1_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.V1_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 3232 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 3232 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 769 Checking for and removing duplicates Writing label file ./rh.V1_exvivo.thresh.label 4001 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.V2_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.V2_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.V2_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.V2_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 3437 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 3437 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 1042 Checking for and removing duplicates Writing label file ./rh.V2_exvivo.thresh.label 4479 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.MT_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.MT_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.MT_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.MT_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 268 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 268 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 98 Checking for and removing duplicates Writing label file ./rh.MT_exvivo.thresh.label 366 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.entorhinal_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.entorhinal_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.entorhinal_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.entorhinal_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 694 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 694 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 43 Checking for and removing duplicates Writing label file ./rh.entorhinal_exvivo.thresh.label 737 mri_label2label: Done mri_label2label --srcsubject fsaverage --srclabel /output/january_2021/fsaverage/label/rh.perirhinal_exvivo.thresh.label --trgsubject subject1 --trglabel ./rh.perirhinal_exvivo.thresh.label --hemi rh --regmethod surface srclabel = /output/january_2021/fsaverage/label/rh.perirhinal_exvivo.thresh.label srcsubject = fsaverage trgsubject = subject1 trglabel = ./rh.perirhinal_exvivo.thresh.label regmethod = surface srchemi = rh trghemi = rh trgsurface = white srcsurfreg = sphere.reg trgsurfreg = sphere.reg usehash = 1 Use ProjAbs = 0, 0 Use ProjFrac = 0, 0 DoPaint 0 SUBJECTS_DIR /output/january_2021 FREESURFER_HOME /opt/freesurfer Loading source label. Found 291 points in source label. Starting surface-based mapping Reading source registration /output/january_2021/fsaverage/surf/rh.sphere.reg Rescaling ... original radius = 100 Reading target surface /output/january_2021/subject1/surf/rh.white Reading target registration /output/january_2021/subject1/surf/rh.sphere.reg Rescaling ... original radius = 99.9996 Building target registration hash (res=16). Building source registration hash (res=16). INFO: found 291 nlabel points Performing mapping from target back to the source label 120537 Number of reverse mapping hits = 6 Checking for and removing duplicates Writing label file ./rh.perirhinal_exvivo.thresh.label 297 mri_label2label: Done PIDs (2652 2657 2661 2669 2675) completed and logs appended. mris_label2annot --s subject1 --hemi rh --ctab /opt/freesurfer/average/colortable_BA.txt --l rh.BA1_exvivo.label --l rh.BA2_exvivo.label --l rh.BA3a_exvivo.label --l rh.BA3b_exvivo.label --l rh.BA4a_exvivo.label --l rh.BA4p_exvivo.label --l rh.BA6_exvivo.label --l rh.BA44_exvivo.label --l rh.BA45_exvivo.label --l rh.V1_exvivo.label --l rh.V2_exvivo.label --l rh.MT_exvivo.label --l rh.entorhinal_exvivo.label --l rh.perirhinal_exvivo.label --a BA_exvivo --maxstatwinner --noverbose Reading ctab /opt/freesurfer/average/colortable_BA.txt Number of ctab entries 15 $Id: mris_label2annot.c,v 1.20 2016/01/07 23:28:11 greve Exp $ cwd /output/january_2021/subject1/label cmdline mris_label2annot --s subject1 --hemi rh --ctab /opt/freesurfer/average/colortable_BA.txt --l rh.BA1_exvivo.label --l rh.BA2_exvivo.label --l rh.BA3a_exvivo.label --l rh.BA3b_exvivo.label --l rh.BA4a_exvivo.label --l rh.BA4p_exvivo.label --l rh.BA6_exvivo.label --l rh.BA44_exvivo.label --l rh.BA45_exvivo.label --l rh.V1_exvivo.label --l rh.V2_exvivo.label --l rh.MT_exvivo.label --l rh.entorhinal_exvivo.label --l rh.perirhinal_exvivo.label --a BA_exvivo --maxstatwinner --noverbose sysname Linux hostname 85b04e758063 machine x86_64 user root subject subject1 hemi rh SUBJECTS_DIR /output/january_2021 ColorTable /opt/freesurfer/average/colortable_BA.txt AnnotName BA_exvivo nlables 14 LabelThresh 0 0.000000 Loading /output/january_2021/subject1/surf/rh.orig 1 1530880 BA1_exvivo 2 16749699 BA2_exvivo 3 16711680 BA3a_exvivo 4 3368703 BA3b_exvivo 5 1376196 BA4a_exvivo 6 13382655 BA4p_exvivo 7 10036737 BA6_exvivo 8 2490521 BA44_exvivo 9 39283 BA45_exvivo 10 3993 V1_exvivo 11 8508928 V2_exvivo 12 10027163 MT_exvivo 13 16422433 perirhinal_exvivo 14 16392598 entorhinal_exvivo Mapping unhit to unknown Found 82303 unhit vertices Writing annot to /output/january_2021/subject1/label/rh.BA_exvivo.annot mris_label2annot --s subject1 --hemi rh --ctab /opt/freesurfer/average/colortable_BA.txt --l rh.BA1_exvivo.thresh.label --l rh.BA2_exvivo.thresh.label --l rh.BA3a_exvivo.thresh.label --l rh.BA3b_exvivo.thresh.label --l rh.BA4a_exvivo.thresh.label --l rh.BA4p_exvivo.thresh.label --l rh.BA6_exvivo.thresh.label --l rh.BA44_exvivo.thresh.label --l rh.BA45_exvivo.thresh.label --l rh.V1_exvivo.thresh.label --l rh.V2_exvivo.thresh.label --l rh.MT_exvivo.thresh.label --l rh.entorhinal_exvivo.thresh.label --l rh.perirhinal_exvivo.thresh.label --a BA_exvivo.thresh --maxstatwinner --noverbose Reading ctab /opt/freesurfer/average/colortable_BA.txt Number of ctab entries 15 $Id: mris_label2annot.c,v 1.20 2016/01/07 23:28:11 greve Exp $ cwd /output/january_2021/subject1/label cmdline mris_label2annot --s subject1 --hemi rh --ctab /opt/freesurfer/average/colortable_BA.txt --l rh.BA1_exvivo.thresh.label --l rh.BA2_exvivo.thresh.label --l rh.BA3a_exvivo.thresh.label --l rh.BA3b_exvivo.thresh.label --l rh.BA4a_exvivo.thresh.label --l rh.BA4p_exvivo.thresh.label --l rh.BA6_exvivo.thresh.label --l rh.BA44_exvivo.thresh.label --l rh.BA45_exvivo.thresh.label --l rh.V1_exvivo.thresh.label --l rh.V2_exvivo.thresh.label --l rh.MT_exvivo.thresh.label --l rh.entorhinal_exvivo.thresh.label --l rh.perirhinal_exvivo.thresh.label --a BA_exvivo.thresh --maxstatwinner --noverbose sysname Linux hostname 85b04e758063 machine x86_64 user root subject subject1 hemi rh SUBJECTS_DIR /output/january_2021 ColorTable /opt/freesurfer/average/colortable_BA.txt AnnotName BA_exvivo.thresh nlables 14 LabelThresh 0 0.000000 Loading /output/january_2021/subject1/surf/rh.orig 1 1530880 BA1_exvivo 2 16749699 BA2_exvivo 3 16711680 BA3a_exvivo 4 3368703 BA3b_exvivo 5 1376196 BA4a_exvivo 6 13382655 BA4p_exvivo 7 10036737 BA6_exvivo 8 2490521 BA44_exvivo 9 39283 BA45_exvivo 10 3993 V1_exvivo 11 8508928 V2_exvivo 12 10027163 MT_exvivo 13 16422433 perirhinal_exvivo 14 16392598 entorhinal_exvivo Mapping unhit to unknown Found 97962 unhit vertices Writing annot to /output/january_2021/subject1/label/rh.BA_exvivo.thresh.annot mris_anatomical_stats -th3 -mgz -f ../stats/rh.BA_exvivo.stats -b -a ./rh.BA_exvivo.annot -c ./BA_exvivo.ctab subject1 rh white computing statistics for each annotation in ./rh.BA_exvivo.annot. reading volume /output/january_2021/subject1/mri/wm.mgz... reading input surface /output/january_2021/subject1/surf/rh.white... reading input pial surface /output/january_2021/subject1/surf/rh.pial... reading input white surface /output/january_2021/subject1/surf/rh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. Using TH3 vertex volume calc Total face volume 184675 Total vertex volume 179898 (mask=0) reading colortable from annotation file... colortable with 15 entries read (originally /opt/freesurfer/average/colortable_BA.txt) Saving annotation colortable ./BA_exvivo.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1642668 mm^3 (det: 1.185940 ) lhCtxGM: 190427.402 189675.000 diff= 752.4 pctdiff= 0.395 rhCtxGM: 178076.111 177439.000 diff= 637.1 pctdiff= 0.358 lhCtxWM: 199404.964 197470.500 diff= 1934.5 pctdiff= 0.970 rhCtxWM: 207751.351 212450.500 diff=-4699.1 pctdiff=-2.262 SubCortGMVol 61310.000 SupraTentVol 874938.828 (868100.000) diff=6838.828 pctdiff=0.782 SupraTentVolNotVent 845218.828 (838380.000) diff=6838.828 pctdiff=0.809 BrainSegVol 1025362.000 (1021360.000) diff=4002.000 pctdiff=0.390 BrainSegVolNotVent 989963.000 (988494.828) diff=1468.172 pctdiff=0.148 BrainSegVolNotVent 989963.000 CerebellumVol 151490.000 VentChorVol 29720.000 3rd4th5thCSF 5679.000 CSFVol 1677.000, OptChiasmVol 93.000 MaskVol 1624348.000 974 557 1661 2.266 0.591 0.121 0.030 10 1.2 BA1_exvivo 4267 2765 5257 1.942 0.584 0.102 0.022 28 4.3 BA2_exvivo 1432 964 1700 2.095 0.556 0.123 0.027 13 1.6 BA3a_exvivo 2378 1502 3368 2.163 0.506 0.106 0.023 19 2.5 BA3b_exvivo 1949 1068 3006 2.563 0.496 0.105 0.026 16 2.2 BA4a_exvivo 1563 911 2206 2.367 0.538 0.107 0.022 14 1.4 BA4p_exvivo 7698 4421 12393 2.591 0.532 0.103 0.025 65 8.0 BA6_exvivo 1901 1073 3014 2.395 0.404 0.112 0.026 22 1.9 BA44_exvivo 3449 2181 5781 2.405 0.430 0.134 0.033 43 4.8 BA45_exvivo 3057 2358 4186 1.693 0.696 0.177 0.052 69 7.5 V1_exvivo 6979 4565 9658 1.843 0.840 0.145 0.045 114 13.2 V2_exvivo 1933 1300 3480 2.313 0.657 0.146 0.040 32 3.5 MT_exvivo 434 240 71 1.154 0.764 0.153 0.067 14 1.4 perirhinal_exvivo 220 130 58 0.898 1.038 0.197 0.199 46 2.5 entorhinal_exvivo mris_anatomical_stats -th3 -mgz -f ../stats/rh.BA_exvivo.thresh.stats -b -a ./rh.BA_exvivo.thresh.annot -c ./BA_exvivo.thresh.ctab subject1 rh white computing statistics for each annotation in ./rh.BA_exvivo.thresh.annot. reading volume /output/january_2021/subject1/mri/wm.mgz... reading input surface /output/january_2021/subject1/surf/rh.white... reading input pial surface /output/january_2021/subject1/surf/rh.pial... reading input white surface /output/january_2021/subject1/surf/rh.white... INFO: using TH3 volume calc INFO: assuming MGZ format for volumes. Using TH3 vertex volume calc Total face volume 184675 Total vertex volume 179898 (mask=0) reading colortable from annotation file... colortable with 15 entries read (originally /opt/freesurfer/average/colortable_BA.txt) Saving annotation colortable ./BA_exvivo.thresh.ctab table columns are: number of vertices total surface area (mm^2) total gray matter volume (mm^3) average cortical thickness +- standard deviation (mm) integrated rectified mean curvature integrated rectified Gaussian curvature folding index intrinsic curvature index structure name atlas_icv (eTIV) = 1642668 mm^3 (det: 1.185940 ) lhCtxGM: 190427.402 189675.000 diff= 752.4 pctdiff= 0.395 rhCtxGM: 178076.111 177439.000 diff= 637.1 pctdiff= 0.358 lhCtxWM: 199404.964 197470.500 diff= 1934.5 pctdiff= 0.970 rhCtxWM: 207751.351 212450.500 diff=-4699.1 pctdiff=-2.262 SubCortGMVol 61310.000 SupraTentVol 874938.828 (868100.000) diff=6838.828 pctdiff=0.782 SupraTentVolNotVent 845218.828 (838380.000) diff=6838.828 pctdiff=0.809 BrainSegVol 1025362.000 (1021360.000) diff=4002.000 pctdiff=0.390 BrainSegVolNotVent 989963.000 (988494.828) diff=1468.172 pctdiff=0.148 BrainSegVolNotVent 989963.000 CerebellumVol 151490.000 VentChorVol 29720.000 3rd4th5thCSF 5679.000 CSFVol 1677.000, OptChiasmVol 93.000 MaskVol 1624348.000 817 414 1327 2.409 0.475 0.115 0.029 9 1.0 BA1_exvivo 2321 1458 3179 2.128 0.590 0.096 0.019 13 2.0 BA2_exvivo 1373 913 1616 2.101 0.555 0.125 0.026 13 1.6 BA3a_exvivo 1959 1249 2727 2.179 0.488 0.110 0.024 17 2.1 BA3b_exvivo 1179 601 1896 2.764 0.446 0.110 0.038 14 2.0 BA4a_exvivo 1217 768 1765 2.346 0.541 0.106 0.021 10 1.0 BA4p_exvivo 5155 2951 8267 2.573 0.538 0.103 0.023 42 5.0 BA6_exvivo 552 311 861 2.464 0.313 0.110 0.029 6 0.6 BA44_exvivo 872 519 1417 2.327 0.305 0.141 0.039 12 1.5 BA45_exvivo 2824 2184 3612 1.653 0.661 0.176 0.052 66 6.8 V1_exvivo 3643 2442 6318 2.006 0.888 0.152 0.051 63 7.8 V2_exvivo 314 205 484 1.872 0.457 0.151 0.040 5 0.7 MT_exvivo 216 119 25 1.157 0.780 0.129 0.061 4 0.7 perirhinal_exvivo 133 104 6 1.064 0.776 0.197 0.094 4 0.6 entorhinal_exvivo #-------------------------------------------- #@# Qdec Cache preproc lh thickness fsaverage Thu Feb 11 02:21:45 UTC 2021 /output/january_2021/subject1/surf mris_preproc --s subject1 --hemi lh --meas thickness --target fsaverage --out lh.thickness.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache preproc lh area fsaverage Thu Feb 11 02:21:45 UTC 2021 /output/january_2021/subject1/surf mris_preproc --s subject1 --hemi lh --meas area --target fsaverage --out lh.area.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache preproc lh area.pial fsaverage Thu Feb 11 02:21:45 UTC 2021 /output/january_2021/subject1/surf mris_preproc --s subject1 --hemi lh --meas area.pial --target fsaverage --out lh.area.pial.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache preproc lh volume fsaverage Thu Feb 11 02:21:45 UTC 2021 /output/january_2021/subject1/surf mris_preproc --s subject1 --hemi lh --meas volume --target fsaverage --out lh.volume.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache preproc lh curv fsaverage Thu Feb 11 02:21:45 UTC 2021 /output/january_2021/subject1/surf mris_preproc --s subject1 --hemi lh --meas curv --target fsaverage --out lh.curv.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache preproc lh sulc fsaverage Thu Feb 11 02:21:45 UTC 2021 /output/january_2021/subject1/surf mris_preproc --s subject1 --hemi lh --meas sulc --target fsaverage --out lh.sulc.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache preproc lh white.K fsaverage Thu Feb 11 02:21:45 UTC 2021 /output/january_2021/subject1/surf mris_preproc --s subject1 --hemi lh --meas white.K --target fsaverage --out lh.white.K.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache preproc lh white.H fsaverage Thu Feb 11 02:21:45 UTC 2021 /output/january_2021/subject1/surf mris_preproc --s subject1 --hemi lh --meas white.H --target fsaverage --out lh.white.H.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache preproc lh jacobian_white fsaverage Thu Feb 11 02:21:45 UTC 2021 /output/january_2021/subject1/surf mris_preproc --s subject1 --hemi lh --meas jacobian_white --target fsaverage --out lh.jacobian_white.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache preproc lh w-g.pct.mgh fsaverage Thu Feb 11 02:21:45 UTC 2021 /output/january_2021/subject1/surf mris_preproc --s subject1 --hemi lh --meas w-g.pct.mgh --target fsaverage --out lh.w-g.pct.mgh.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache preproc rh thickness fsaverage Thu Feb 11 02:21:45 UTC 2021 /output/january_2021/subject1/surf mris_preproc --s subject1 --hemi rh --meas thickness --target fsaverage --out rh.thickness.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache preproc rh area fsaverage Thu Feb 11 02:21:45 UTC 2021 /output/january_2021/subject1/surf mris_preproc --s subject1 --hemi rh --meas area --target fsaverage --out rh.area.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache preproc rh area.pial fsaverage Thu Feb 11 02:21:45 UTC 2021 /output/january_2021/subject1/surf mris_preproc --s subject1 --hemi rh --meas area.pial --target fsaverage --out rh.area.pial.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache preproc rh volume fsaverage Thu Feb 11 02:21:45 UTC 2021 /output/january_2021/subject1/surf mris_preproc --s subject1 --hemi rh --meas volume --target fsaverage --out rh.volume.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache preproc rh curv fsaverage Thu Feb 11 02:21:45 UTC 2021 /output/january_2021/subject1/surf mris_preproc --s subject1 --hemi rh --meas curv --target fsaverage --out rh.curv.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache preproc rh sulc fsaverage Thu Feb 11 02:21:45 UTC 2021 /output/january_2021/subject1/surf mris_preproc --s subject1 --hemi rh --meas sulc --target fsaverage --out rh.sulc.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache preproc rh white.K fsaverage Thu Feb 11 02:21:45 UTC 2021 /output/january_2021/subject1/surf mris_preproc --s subject1 --hemi rh --meas white.K --target fsaverage --out rh.white.K.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache preproc rh white.H fsaverage Thu Feb 11 02:21:45 UTC 2021 /output/january_2021/subject1/surf mris_preproc --s subject1 --hemi rh --meas white.H --target fsaverage --out rh.white.H.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache preproc rh jacobian_white fsaverage Thu Feb 11 02:21:45 UTC 2021 /output/january_2021/subject1/surf mris_preproc --s subject1 --hemi rh --meas jacobian_white --target fsaverage --out rh.jacobian_white.fsaverage.mgh #-------------------------------------------- #@# Qdec Cache preproc rh w-g.pct.mgh fsaverage Thu Feb 11 02:21:45 UTC 2021 /output/january_2021/subject1/surf mris_preproc --s subject1 --hemi rh --meas w-g.pct.mgh --target fsaverage --out rh.w-g.pct.mgh.fsaverage.mgh Waiting for PID 3143 of (3143 3146 3150 3158 3169 3179 3195 3204 3218 3232 3252 3293 3308 3322 3340 3368 3386 3419 3451 3462) to complete... Waiting for PID 3146 of (3143 3146 3150 3158 3169 3179 3195 3204 3218 3232 3252 3293 3308 3322 3340 3368 3386 3419 3451 3462) to complete... Waiting for PID 3150 of (3143 3146 3150 3158 3169 3179 3195 3204 3218 3232 3252 3293 3308 3322 3340 3368 3386 3419 3451 3462) to complete... Waiting for PID 3158 of (3143 3146 3150 3158 3169 3179 3195 3204 3218 3232 3252 3293 3308 3322 3340 3368 3386 3419 3451 3462) to complete... Waiting for PID 3169 of (3143 3146 3150 3158 3169 3179 3195 3204 3218 3232 3252 3293 3308 3322 3340 3368 3386 3419 3451 3462) to complete... Waiting for PID 3179 of (3143 3146 3150 3158 3169 3179 3195 3204 3218 3232 3252 3293 3308 3322 3340 3368 3386 3419 3451 3462) to complete... Waiting for PID 3195 of (3143 3146 3150 3158 3169 3179 3195 3204 3218 3232 3252 3293 3308 3322 3340 3368 3386 3419 3451 3462) to complete... Waiting for PID 3204 of (3143 3146 3150 3158 3169 3179 3195 3204 3218 3232 3252 3293 3308 3322 3340 3368 3386 3419 3451 3462) to complete... Waiting for PID 3218 of (3143 3146 3150 3158 3169 3179 3195 3204 3218 3232 3252 3293 3308 3322 3340 3368 3386 3419 3451 3462) to complete... Waiting for PID 3232 of (3143 3146 3150 3158 3169 3179 3195 3204 3218 3232 3252 3293 3308 3322 3340 3368 3386 3419 3451 3462) to complete... Waiting for PID 3252 of (3143 3146 3150 3158 3169 3179 3195 3204 3218 3232 3252 3293 3308 3322 3340 3368 3386 3419 3451 3462) to complete... Waiting for PID 3293 of (3143 3146 3150 3158 3169 3179 3195 3204 3218 3232 3252 3293 3308 3322 3340 3368 3386 3419 3451 3462) to complete... Waiting for PID 3308 of (3143 3146 3150 3158 3169 3179 3195 3204 3218 3232 3252 3293 3308 3322 3340 3368 3386 3419 3451 3462) to complete... Waiting for PID 3322 of (3143 3146 3150 3158 3169 3179 3195 3204 3218 3232 3252 3293 3308 3322 3340 3368 3386 3419 3451 3462) to complete... Waiting for PID 3340 of (3143 3146 3150 3158 3169 3179 3195 3204 3218 3232 3252 3293 3308 3322 3340 3368 3386 3419 3451 3462) to complete... Waiting for PID 3368 of (3143 3146 3150 3158 3169 3179 3195 3204 3218 3232 3252 3293 3308 3322 3340 3368 3386 3419 3451 3462) to complete... Waiting for PID 3386 of (3143 3146 3150 3158 3169 3179 3195 3204 3218 3232 3252 3293 3308 3322 3340 3368 3386 3419 3451 3462) to complete... Waiting for PID 3419 of (3143 3146 3150 3158 3169 3179 3195 3204 3218 3232 3252 3293 3308 3322 3340 3368 3386 3419 3451 3462) to complete... Waiting for PID 3451 of (3143 3146 3150 3158 3169 3179 3195 3204 3218 3232 3252 3293 3308 3322 3340 3368 3386 3419 3451 3462) to complete... Waiting for PID 3462 of (3143 3146 3150 3158 3169 3179 3195 3204 3218 3232 3252 3293 3308 3322 3340 3368 3386 3419 3451 3462) to complete... mris_preproc --s subject1 --hemi lh --meas thickness --target fsaverage --out lh.thickness.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.3143 /output/january_2021/subject1/surf Log file is lh.thickness.fsaverage.mris_preproc.log Thu Feb 11 02:21:45 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf /opt/freesurfer/bin/mris_preproc --s subject1 --hemi lh --meas thickness --target fsaverage --out lh.thickness.fsaverage.mgh Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a tmpdir is ./tmp.mris_preproc.3143 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/1 subject1 Thu Feb 11 02:21:45 UTC 2021 -------------- ----------------------- mri_surf2surf --srcsubject subject1 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3143/subject1.1.mgh --sval /output/january_2021/subject1/surf/lh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --srcsubject subject1 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3143/subject1.1.mgh --sval /output/january_2021/subject1/surf/lh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = subject1 srcval = /output/january_2021/subject1/surf/lh.thickness srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.3143/subject1.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/subject1/surf/lh.sphere.reg Loading source data Reading curvature file /output/january_2021/subject1/surf/lh.thickness Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (117888) Reverse Loop had 20244 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149681, nTrgMulti = 14161, MnTrgMultiHits = 2.42956 nSrc121 = 76669, nSrcLost = 0, nSrcMulti = 41219, MnSrcMultiHits = 2.60601 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.3143/subject1.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.3143/subject1.1.mgh --o lh.thickness.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to lh.thickness.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.3143 Thu Feb 11 02:21:54 UTC 2021 mris_preproc done mris_preproc --s subject1 --hemi lh --meas area --target fsaverage --out lh.area.fsaverage.mgh nsubjects = 1 INFO: turning on jacobican correction tmpdir is ./tmp.mris_preproc.3146 /output/january_2021/subject1/surf Log file is lh.area.fsaverage.mris_preproc.log Thu Feb 11 02:21:45 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf /opt/freesurfer/bin/mris_preproc --s subject1 --hemi lh --meas area --target fsaverage --out lh.area.fsaverage.mgh Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a tmpdir is ./tmp.mris_preproc.3146 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/1 subject1 Thu Feb 11 02:21:45 UTC 2021 -------------- ----------------------- mri_surf2surf --srcsubject subject1 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3146/subject1.1.mgh --sval /output/january_2021/subject1/surf/lh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --srcsubject subject1 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3146/subject1.1.mgh --sval /output/january_2021/subject1/surf/lh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = subject1 srcval = /output/january_2021/subject1/surf/lh.area srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.3146/subject1.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/subject1/surf/lh.sphere.reg Loading source data Reading curvature file /output/january_2021/subject1/surf/lh.area Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (117888) Reverse Loop had 20244 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 149681, nTrgMulti = 14161, MnTrgMultiHits = 2.42956 nSrc121 = 76669, nSrcLost = 0, nSrcMulti = 41219, MnSrcMultiHits = 2.60601 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.3146/subject1.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.3146/subject1.1.mgh --o lh.area.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to lh.area.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.3146 Thu Feb 11 02:21:55 UTC 2021 mris_preproc done mris_preproc --s subject1 --hemi lh --meas area.pial --target fsaverage --out lh.area.pial.fsaverage.mgh nsubjects = 1 INFO: turning on jacobican correction tmpdir is ./tmp.mris_preproc.3150 /output/january_2021/subject1/surf Log file is lh.area.pial.fsaverage.mris_preproc.log Thu Feb 11 02:21:45 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf /opt/freesurfer/bin/mris_preproc --s subject1 --hemi lh --meas area.pial --target fsaverage --out lh.area.pial.fsaverage.mgh Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a tmpdir is ./tmp.mris_preproc.3150 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/1 subject1 Thu Feb 11 02:21:45 UTC 2021 -------------- ----------------------- mri_surf2surf --srcsubject subject1 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3150/subject1.1.mgh --sval /output/january_2021/subject1/surf/lh.area.pial --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --srcsubject subject1 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3150/subject1.1.mgh --sval /output/january_2021/subject1/surf/lh.area.pial --jac --sfmt curv --noreshape --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = subject1 srcval = /output/january_2021/subject1/surf/lh.area.pial srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.3150/subject1.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/subject1/surf/lh.sphere.reg Loading source data Reading curvature file /output/january_2021/subject1/surf/lh.area.pial Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (117888) Reverse Loop had 20244 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 149681, nTrgMulti = 14161, MnTrgMultiHits = 2.42956 nSrc121 = 76669, nSrcLost = 0, nSrcMulti = 41219, MnSrcMultiHits = 2.60601 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.3150/subject1.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.3150/subject1.1.mgh --o lh.area.pial.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to lh.area.pial.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.3150 Thu Feb 11 02:21:55 UTC 2021 mris_preproc done mris_preproc --s subject1 --hemi lh --meas volume --target fsaverage --out lh.volume.fsaverage.mgh nsubjects = 1 INFO: turning on jacobican correction tmpdir is ./tmp.mris_preproc.3158 /output/january_2021/subject1/surf Log file is lh.volume.fsaverage.mris_preproc.log Thu Feb 11 02:21:45 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf /opt/freesurfer/bin/mris_preproc --s subject1 --hemi lh --meas volume --target fsaverage --out lh.volume.fsaverage.mgh Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a tmpdir is ./tmp.mris_preproc.3158 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/1 subject1 Thu Feb 11 02:21:45 UTC 2021 -------------- ----------------------- mri_surf2surf --srcsubject subject1 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3158/subject1.1.mgh --sval /output/january_2021/subject1/surf/lh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --srcsubject subject1 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3158/subject1.1.mgh --sval /output/january_2021/subject1/surf/lh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = subject1 srcval = /output/january_2021/subject1/surf/lh.volume srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.3158/subject1.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/subject1/surf/lh.sphere.reg Loading source data Reading curvature file /output/january_2021/subject1/surf/lh.volume Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (117888) Reverse Loop had 20244 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 149681, nTrgMulti = 14161, MnTrgMultiHits = 2.42956 nSrc121 = 76669, nSrcLost = 0, nSrcMulti = 41219, MnSrcMultiHits = 2.60601 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.3158/subject1.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.3158/subject1.1.mgh --o lh.volume.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to lh.volume.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.3158 Thu Feb 11 02:21:55 UTC 2021 mris_preproc done mris_preproc --s subject1 --hemi lh --meas curv --target fsaverage --out lh.curv.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.3169 /output/january_2021/subject1/surf Log file is lh.curv.fsaverage.mris_preproc.log Thu Feb 11 02:21:45 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf /opt/freesurfer/bin/mris_preproc --s subject1 --hemi lh --meas curv --target fsaverage --out lh.curv.fsaverage.mgh Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a tmpdir is ./tmp.mris_preproc.3169 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/1 subject1 Thu Feb 11 02:21:45 UTC 2021 -------------- ----------------------- mri_surf2surf --srcsubject subject1 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3169/subject1.1.mgh --sval /output/january_2021/subject1/surf/lh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --srcsubject subject1 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3169/subject1.1.mgh --sval /output/january_2021/subject1/surf/lh.curv --sfmt curv --noreshape --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = subject1 srcval = /output/january_2021/subject1/surf/lh.curv srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.3169/subject1.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/subject1/surf/lh.sphere.reg Loading source data Reading curvature file /output/january_2021/subject1/surf/lh.curv Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (117888) Reverse Loop had 20244 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149681, nTrgMulti = 14161, MnTrgMultiHits = 2.42956 nSrc121 = 76669, nSrcLost = 0, nSrcMulti = 41219, MnSrcMultiHits = 2.60601 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.3169/subject1.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.3169/subject1.1.mgh --o lh.curv.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to lh.curv.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.3169 Thu Feb 11 02:21:53 UTC 2021 mris_preproc done mris_preproc --s subject1 --hemi lh --meas sulc --target fsaverage --out lh.sulc.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.3179 /output/january_2021/subject1/surf Log file is lh.sulc.fsaverage.mris_preproc.log Thu Feb 11 02:21:45 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf /opt/freesurfer/bin/mris_preproc --s subject1 --hemi lh --meas sulc --target fsaverage --out lh.sulc.fsaverage.mgh Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a tmpdir is ./tmp.mris_preproc.3179 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/1 subject1 Thu Feb 11 02:21:45 UTC 2021 -------------- ----------------------- mri_surf2surf --srcsubject subject1 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3179/subject1.1.mgh --sval /output/january_2021/subject1/surf/lh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --srcsubject subject1 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3179/subject1.1.mgh --sval /output/january_2021/subject1/surf/lh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = subject1 srcval = /output/january_2021/subject1/surf/lh.sulc srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.3179/subject1.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/subject1/surf/lh.sphere.reg Loading source data Reading curvature file /output/january_2021/subject1/surf/lh.sulc Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (117888) Reverse Loop had 20244 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149681, nTrgMulti = 14161, MnTrgMultiHits = 2.42956 nSrc121 = 76669, nSrcLost = 0, nSrcMulti = 41219, MnSrcMultiHits = 2.60601 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.3179/subject1.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.3179/subject1.1.mgh --o lh.sulc.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to lh.sulc.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.3179 Thu Feb 11 02:21:54 UTC 2021 mris_preproc done mris_preproc --s subject1 --hemi lh --meas white.K --target fsaverage --out lh.white.K.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.3195 /output/january_2021/subject1/surf Log file is lh.white.K.fsaverage.mris_preproc.log Thu Feb 11 02:21:45 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf /opt/freesurfer/bin/mris_preproc --s subject1 --hemi lh --meas white.K --target fsaverage --out lh.white.K.fsaverage.mgh Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a tmpdir is ./tmp.mris_preproc.3195 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/1 subject1 Thu Feb 11 02:21:45 UTC 2021 -------------- ----------------------- mri_surf2surf --srcsubject subject1 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3195/subject1.1.mgh --sval /output/january_2021/subject1/surf/lh.white.K --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --srcsubject subject1 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3195/subject1.1.mgh --sval /output/january_2021/subject1/surf/lh.white.K --sfmt curv --noreshape --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = subject1 srcval = /output/january_2021/subject1/surf/lh.white.K srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.3195/subject1.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/subject1/surf/lh.sphere.reg Loading source data Reading curvature file /output/january_2021/subject1/surf/lh.white.K Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (117888) Reverse Loop had 20244 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149681, nTrgMulti = 14161, MnTrgMultiHits = 2.42956 nSrc121 = 76669, nSrcLost = 0, nSrcMulti = 41219, MnSrcMultiHits = 2.60601 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.3195/subject1.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.3195/subject1.1.mgh --o lh.white.K.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to lh.white.K.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.3195 Thu Feb 11 02:21:55 UTC 2021 mris_preproc done mris_preproc --s subject1 --hemi lh --meas white.H --target fsaverage --out lh.white.H.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.3204 /output/january_2021/subject1/surf Log file is lh.white.H.fsaverage.mris_preproc.log Thu Feb 11 02:21:45 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf /opt/freesurfer/bin/mris_preproc --s subject1 --hemi lh --meas white.H --target fsaverage --out lh.white.H.fsaverage.mgh Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a tmpdir is ./tmp.mris_preproc.3204 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/1 subject1 Thu Feb 11 02:21:45 UTC 2021 -------------- ----------------------- mri_surf2surf --srcsubject subject1 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3204/subject1.1.mgh --sval /output/january_2021/subject1/surf/lh.white.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --srcsubject subject1 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3204/subject1.1.mgh --sval /output/january_2021/subject1/surf/lh.white.H --sfmt curv --noreshape --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = subject1 srcval = /output/january_2021/subject1/surf/lh.white.H srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.3204/subject1.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/subject1/surf/lh.sphere.reg Loading source data Reading curvature file /output/january_2021/subject1/surf/lh.white.H Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (117888) Reverse Loop had 20244 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149681, nTrgMulti = 14161, MnTrgMultiHits = 2.42956 nSrc121 = 76669, nSrcLost = 0, nSrcMulti = 41219, MnSrcMultiHits = 2.60601 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.3204/subject1.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.3204/subject1.1.mgh --o lh.white.H.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to lh.white.H.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.3204 Thu Feb 11 02:21:53 UTC 2021 mris_preproc done mris_preproc --s subject1 --hemi lh --meas jacobian_white --target fsaverage --out lh.jacobian_white.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.3218 /output/january_2021/subject1/surf Log file is lh.jacobian_white.fsaverage.mris_preproc.log Thu Feb 11 02:21:45 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf /opt/freesurfer/bin/mris_preproc --s subject1 --hemi lh --meas jacobian_white --target fsaverage --out lh.jacobian_white.fsaverage.mgh Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a tmpdir is ./tmp.mris_preproc.3218 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/1 subject1 Thu Feb 11 02:21:45 UTC 2021 -------------- ----------------------- mri_surf2surf --srcsubject subject1 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3218/subject1.1.mgh --sval /output/january_2021/subject1/surf/lh.jacobian_white --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --srcsubject subject1 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3218/subject1.1.mgh --sval /output/january_2021/subject1/surf/lh.jacobian_white --sfmt curv --noreshape --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = subject1 srcval = /output/january_2021/subject1/surf/lh.jacobian_white srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.3218/subject1.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/subject1/surf/lh.sphere.reg Loading source data Reading curvature file /output/january_2021/subject1/surf/lh.jacobian_white Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (117888) Reverse Loop had 20244 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149681, nTrgMulti = 14161, MnTrgMultiHits = 2.42956 nSrc121 = 76669, nSrcLost = 0, nSrcMulti = 41219, MnSrcMultiHits = 2.60601 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.3218/subject1.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.3218/subject1.1.mgh --o lh.jacobian_white.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to lh.jacobian_white.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.3218 Thu Feb 11 02:21:53 UTC 2021 mris_preproc done mris_preproc --s subject1 --hemi lh --meas w-g.pct.mgh --target fsaverage --out lh.w-g.pct.mgh.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.3232 /output/january_2021/subject1/surf Log file is lh.w-g.pct.mgh.fsaverage.mris_preproc.log Thu Feb 11 02:21:45 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf /opt/freesurfer/bin/mris_preproc --s subject1 --hemi lh --meas w-g.pct.mgh --target fsaverage --out lh.w-g.pct.mgh.fsaverage.mgh Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a tmpdir is ./tmp.mris_preproc.3232 Src lh sphere.reg Trg lh sphere.reg --------------------------------------------------- #@# 1/1 subject1 Thu Feb 11 02:21:45 UTC 2021 -------------- ----------------------- mri_surf2surf --srcsubject subject1 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3232/subject1.1.mgh --sval /output/january_2021/subject1/surf/lh.w-g.pct.mgh --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --srcsubject subject1 --srchemi lh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi lh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3232/subject1.1.mgh --sval /output/january_2021/subject1/surf/lh.w-g.pct.mgh --sfmt curv --noreshape --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = subject1 srcval = /output/january_2021/subject1/surf/lh.w-g.pct.mgh srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.3232/subject1.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/subject1/surf/lh.sphere.reg Loading source data Reading curvature file /output/january_2021/subject1/surf/lh.w-g.pct.mgh Reading source subject label mask lh.cortex.label masking the input Reading target surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (117888) Reverse Loop had 20244 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 149681, nTrgMulti = 14161, MnTrgMultiHits = 2.42956 nSrc121 = 76669, nSrcLost = 0, nSrcMulti = 41219, MnSrcMultiHits = 2.60601 Reading target space mask label lh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.3232/subject1.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.3232/subject1.1.mgh --o lh.w-g.pct.mgh.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to lh.w-g.pct.mgh.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.3232 Thu Feb 11 02:21:54 UTC 2021 mris_preproc done mris_preproc --s subject1 --hemi rh --meas thickness --target fsaverage --out rh.thickness.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.3252 /output/january_2021/subject1/surf Log file is rh.thickness.fsaverage.mris_preproc.log Thu Feb 11 02:21:45 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf /opt/freesurfer/bin/mris_preproc --s subject1 --hemi rh --meas thickness --target fsaverage --out rh.thickness.fsaverage.mgh Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a tmpdir is ./tmp.mris_preproc.3252 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/1 subject1 Thu Feb 11 02:21:45 UTC 2021 -------------- ----------------------- mri_surf2surf --srcsubject subject1 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3252/subject1.1.mgh --sval /output/january_2021/subject1/surf/rh.thickness --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --srcsubject subject1 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3252/subject1.1.mgh --sval /output/january_2021/subject1/surf/rh.thickness --sfmt curv --noreshape --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = subject1 srcval = /output/january_2021/subject1/surf/rh.thickness srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.3252/subject1.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/subject1/surf/rh.sphere.reg Loading source data Reading curvature file /output/january_2021/subject1/surf/rh.thickness Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (120537) Reverse Loop had 24115 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146526, nTrgMulti = 17316, MnTrgMultiHits = 2.39264 nSrc121 = 85238, nSrcLost = 0, nSrcMulti = 35299, MnSrcMultiHits = 2.90997 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.3252/subject1.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.3252/subject1.1.mgh --o rh.thickness.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to rh.thickness.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.3252 Thu Feb 11 02:21:53 UTC 2021 mris_preproc done mris_preproc --s subject1 --hemi rh --meas area --target fsaverage --out rh.area.fsaverage.mgh nsubjects = 1 INFO: turning on jacobican correction tmpdir is ./tmp.mris_preproc.3293 /output/january_2021/subject1/surf Log file is rh.area.fsaverage.mris_preproc.log Thu Feb 11 02:21:45 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf /opt/freesurfer/bin/mris_preproc --s subject1 --hemi rh --meas area --target fsaverage --out rh.area.fsaverage.mgh Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a tmpdir is ./tmp.mris_preproc.3293 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/1 subject1 Thu Feb 11 02:21:45 UTC 2021 -------------- ----------------------- mri_surf2surf --srcsubject subject1 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3293/subject1.1.mgh --sval /output/january_2021/subject1/surf/rh.area --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --srcsubject subject1 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3293/subject1.1.mgh --sval /output/january_2021/subject1/surf/rh.area --jac --sfmt curv --noreshape --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = subject1 srcval = /output/january_2021/subject1/surf/rh.area srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.3293/subject1.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/subject1/surf/rh.sphere.reg Loading source data Reading curvature file /output/january_2021/subject1/surf/rh.area Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (120537) Reverse Loop had 24115 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 146526, nTrgMulti = 17316, MnTrgMultiHits = 2.39264 nSrc121 = 85238, nSrcLost = 0, nSrcMulti = 35299, MnSrcMultiHits = 2.90997 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.3293/subject1.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.3293/subject1.1.mgh --o rh.area.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to rh.area.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.3293 Thu Feb 11 02:21:56 UTC 2021 mris_preproc done mris_preproc --s subject1 --hemi rh --meas area.pial --target fsaverage --out rh.area.pial.fsaverage.mgh nsubjects = 1 INFO: turning on jacobican correction tmpdir is ./tmp.mris_preproc.3308 /output/january_2021/subject1/surf Log file is rh.area.pial.fsaverage.mris_preproc.log Thu Feb 11 02:21:45 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf /opt/freesurfer/bin/mris_preproc --s subject1 --hemi rh --meas area.pial --target fsaverage --out rh.area.pial.fsaverage.mgh Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a tmpdir is ./tmp.mris_preproc.3308 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/1 subject1 Thu Feb 11 02:21:45 UTC 2021 -------------- ----------------------- mri_surf2surf --srcsubject subject1 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3308/subject1.1.mgh --sval /output/january_2021/subject1/surf/rh.area.pial --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --srcsubject subject1 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3308/subject1.1.mgh --sval /output/january_2021/subject1/surf/rh.area.pial --jac --sfmt curv --noreshape --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = subject1 srcval = /output/january_2021/subject1/surf/rh.area.pial srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.3308/subject1.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/subject1/surf/rh.sphere.reg Loading source data Reading curvature file /output/january_2021/subject1/surf/rh.area.pial Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (120537) Reverse Loop had 24115 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 146526, nTrgMulti = 17316, MnTrgMultiHits = 2.39264 nSrc121 = 85238, nSrcLost = 0, nSrcMulti = 35299, MnSrcMultiHits = 2.90997 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.3308/subject1.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.3308/subject1.1.mgh --o rh.area.pial.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to rh.area.pial.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.3308 Thu Feb 11 02:21:56 UTC 2021 mris_preproc done mris_preproc --s subject1 --hemi rh --meas volume --target fsaverage --out rh.volume.fsaverage.mgh nsubjects = 1 INFO: turning on jacobican correction tmpdir is ./tmp.mris_preproc.3322 /output/january_2021/subject1/surf Log file is rh.volume.fsaverage.mris_preproc.log Thu Feb 11 02:21:45 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf /opt/freesurfer/bin/mris_preproc --s subject1 --hemi rh --meas volume --target fsaverage --out rh.volume.fsaverage.mgh Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a tmpdir is ./tmp.mris_preproc.3322 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/1 subject1 Thu Feb 11 02:21:45 UTC 2021 -------------- ----------------------- mri_surf2surf --srcsubject subject1 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3322/subject1.1.mgh --sval /output/january_2021/subject1/surf/rh.volume --jac --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --srcsubject subject1 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3322/subject1.1.mgh --sval /output/january_2021/subject1/surf/rh.volume --jac --sfmt curv --noreshape --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = subject1 srcval = /output/january_2021/subject1/surf/rh.volume srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.3322/subject1.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/subject1/surf/rh.sphere.reg Loading source data Reading curvature file /output/january_2021/subject1/surf/rh.volume Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface with Jacobian Correction surf2surf_nnfr_jac: building source hash (res=16). Surf2SurfJac: 1st Forward Loop (163842) Surf2SurfJac: 2nd Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2SurfJac: Reverse Loop (120537) Reverse Loop had 24115 hits INFO: nSrcLost = 0 surf2surf_nnfr_jac() done nTrg121 = 146526, nTrgMulti = 17316, MnTrgMultiHits = 2.39264 nSrc121 = 85238, nSrcLost = 0, nSrcMulti = 35299, MnSrcMultiHits = 2.90997 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.3322/subject1.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.3322/subject1.1.mgh --o rh.volume.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to rh.volume.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.3322 Thu Feb 11 02:21:55 UTC 2021 mris_preproc done mris_preproc --s subject1 --hemi rh --meas curv --target fsaverage --out rh.curv.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.3340 /output/january_2021/subject1/surf Log file is rh.curv.fsaverage.mris_preproc.log Thu Feb 11 02:21:45 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf /opt/freesurfer/bin/mris_preproc --s subject1 --hemi rh --meas curv --target fsaverage --out rh.curv.fsaverage.mgh Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a tmpdir is ./tmp.mris_preproc.3340 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/1 subject1 Thu Feb 11 02:21:46 UTC 2021 -------------- ----------------------- mri_surf2surf --srcsubject subject1 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3340/subject1.1.mgh --sval /output/january_2021/subject1/surf/rh.curv --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --srcsubject subject1 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3340/subject1.1.mgh --sval /output/january_2021/subject1/surf/rh.curv --sfmt curv --noreshape --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = subject1 srcval = /output/january_2021/subject1/surf/rh.curv srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.3340/subject1.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/subject1/surf/rh.sphere.reg Loading source data Reading curvature file /output/january_2021/subject1/surf/rh.curv Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (120537) Reverse Loop had 24115 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146526, nTrgMulti = 17316, MnTrgMultiHits = 2.39264 nSrc121 = 85238, nSrcLost = 0, nSrcMulti = 35299, MnSrcMultiHits = 2.90997 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.3340/subject1.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.3340/subject1.1.mgh --o rh.curv.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to rh.curv.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.3340 Thu Feb 11 02:21:54 UTC 2021 mris_preproc done mris_preproc --s subject1 --hemi rh --meas sulc --target fsaverage --out rh.sulc.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.3368 /output/january_2021/subject1/surf Log file is rh.sulc.fsaverage.mris_preproc.log Thu Feb 11 02:21:45 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf /opt/freesurfer/bin/mris_preproc --s subject1 --hemi rh --meas sulc --target fsaverage --out rh.sulc.fsaverage.mgh Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a tmpdir is ./tmp.mris_preproc.3368 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/1 subject1 Thu Feb 11 02:21:46 UTC 2021 -------------- ----------------------- mri_surf2surf --srcsubject subject1 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3368/subject1.1.mgh --sval /output/january_2021/subject1/surf/rh.sulc --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --srcsubject subject1 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3368/subject1.1.mgh --sval /output/january_2021/subject1/surf/rh.sulc --sfmt curv --noreshape --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = subject1 srcval = /output/january_2021/subject1/surf/rh.sulc srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.3368/subject1.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/subject1/surf/rh.sphere.reg Loading source data Reading curvature file /output/january_2021/subject1/surf/rh.sulc Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (120537) Reverse Loop had 24115 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146526, nTrgMulti = 17316, MnTrgMultiHits = 2.39264 nSrc121 = 85238, nSrcLost = 0, nSrcMulti = 35299, MnSrcMultiHits = 2.90997 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.3368/subject1.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.3368/subject1.1.mgh --o rh.sulc.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to rh.sulc.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.3368 Thu Feb 11 02:21:54 UTC 2021 mris_preproc done mris_preproc --s subject1 --hemi rh --meas white.K --target fsaverage --out rh.white.K.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.3386 /output/january_2021/subject1/surf Log file is rh.white.K.fsaverage.mris_preproc.log Thu Feb 11 02:21:45 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf /opt/freesurfer/bin/mris_preproc --s subject1 --hemi rh --meas white.K --target fsaverage --out rh.white.K.fsaverage.mgh Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a tmpdir is ./tmp.mris_preproc.3386 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/1 subject1 Thu Feb 11 02:21:46 UTC 2021 -------------- ----------------------- mri_surf2surf --srcsubject subject1 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3386/subject1.1.mgh --sval /output/january_2021/subject1/surf/rh.white.K --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --srcsubject subject1 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3386/subject1.1.mgh --sval /output/january_2021/subject1/surf/rh.white.K --sfmt curv --noreshape --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = subject1 srcval = /output/january_2021/subject1/surf/rh.white.K srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.3386/subject1.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/subject1/surf/rh.sphere.reg Loading source data Reading curvature file /output/january_2021/subject1/surf/rh.white.K Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (120537) Reverse Loop had 24115 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146526, nTrgMulti = 17316, MnTrgMultiHits = 2.39264 nSrc121 = 85238, nSrcLost = 0, nSrcMulti = 35299, MnSrcMultiHits = 2.90997 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.3386/subject1.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.3386/subject1.1.mgh --o rh.white.K.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to rh.white.K.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.3386 Thu Feb 11 02:21:54 UTC 2021 mris_preproc done mris_preproc --s subject1 --hemi rh --meas white.H --target fsaverage --out rh.white.H.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.3419 /output/january_2021/subject1/surf Log file is rh.white.H.fsaverage.mris_preproc.log Thu Feb 11 02:21:45 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf /opt/freesurfer/bin/mris_preproc --s subject1 --hemi rh --meas white.H --target fsaverage --out rh.white.H.fsaverage.mgh Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a tmpdir is ./tmp.mris_preproc.3419 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/1 subject1 Thu Feb 11 02:21:45 UTC 2021 -------------- ----------------------- mri_surf2surf --srcsubject subject1 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3419/subject1.1.mgh --sval /output/january_2021/subject1/surf/rh.white.H --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --srcsubject subject1 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3419/subject1.1.mgh --sval /output/january_2021/subject1/surf/rh.white.H --sfmt curv --noreshape --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = subject1 srcval = /output/january_2021/subject1/surf/rh.white.H srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.3419/subject1.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/subject1/surf/rh.sphere.reg Loading source data Reading curvature file /output/january_2021/subject1/surf/rh.white.H Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (120537) Reverse Loop had 24115 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146526, nTrgMulti = 17316, MnTrgMultiHits = 2.39264 nSrc121 = 85238, nSrcLost = 0, nSrcMulti = 35299, MnSrcMultiHits = 2.90997 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.3419/subject1.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.3419/subject1.1.mgh --o rh.white.H.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to rh.white.H.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.3419 Thu Feb 11 02:21:54 UTC 2021 mris_preproc done mris_preproc --s subject1 --hemi rh --meas jacobian_white --target fsaverage --out rh.jacobian_white.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.3451 /output/january_2021/subject1/surf Log file is rh.jacobian_white.fsaverage.mris_preproc.log Thu Feb 11 02:21:45 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf /opt/freesurfer/bin/mris_preproc --s subject1 --hemi rh --meas jacobian_white --target fsaverage --out rh.jacobian_white.fsaverage.mgh Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a tmpdir is ./tmp.mris_preproc.3451 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/1 subject1 Thu Feb 11 02:21:45 UTC 2021 -------------- ----------------------- mri_surf2surf --srcsubject subject1 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3451/subject1.1.mgh --sval /output/january_2021/subject1/surf/rh.jacobian_white --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --srcsubject subject1 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3451/subject1.1.mgh --sval /output/january_2021/subject1/surf/rh.jacobian_white --sfmt curv --noreshape --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = subject1 srcval = /output/january_2021/subject1/surf/rh.jacobian_white srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.3451/subject1.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/subject1/surf/rh.sphere.reg Loading source data Reading curvature file /output/january_2021/subject1/surf/rh.jacobian_white Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (120537) Reverse Loop had 24115 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146526, nTrgMulti = 17316, MnTrgMultiHits = 2.39264 nSrc121 = 85238, nSrcLost = 0, nSrcMulti = 35299, MnSrcMultiHits = 2.90997 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.3451/subject1.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.3451/subject1.1.mgh --o rh.jacobian_white.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to rh.jacobian_white.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.3451 Thu Feb 11 02:21:54 UTC 2021 mris_preproc done mris_preproc --s subject1 --hemi rh --meas w-g.pct.mgh --target fsaverage --out rh.w-g.pct.mgh.fsaverage.mgh nsubjects = 1 tmpdir is ./tmp.mris_preproc.3462 /output/january_2021/subject1/surf Log file is rh.w-g.pct.mgh.fsaverage.mris_preproc.log Thu Feb 11 02:21:45 UTC 2021 setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf /opt/freesurfer/bin/mris_preproc --s subject1 --hemi rh --meas w-g.pct.mgh --target fsaverage --out rh.w-g.pct.mgh.fsaverage.mgh Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux $Id: mris_preproc,v 1.76.2.1 2016/08/12 17:55:45 zkaufman Exp $ freesurfer-Linux-centos6_x86_64-stable-pub-v6.0.1-f53a55a tmpdir is ./tmp.mris_preproc.3462 Src rh sphere.reg Trg rh sphere.reg --------------------------------------------------- #@# 1/1 subject1 Thu Feb 11 02:21:46 UTC 2021 -------------- ----------------------- mri_surf2surf --srcsubject subject1 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3462/subject1.1.mgh --sval /output/january_2021/subject1/surf/rh.w-g.pct.mgh --sfmt curv --noreshape --cortex Source registration surface changed to sphere.reg Target registration surface changed to sphere.reg $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --srcsubject subject1 --srchemi rh --srcsurfreg sphere.reg --trgsubject fsaverage --trghemi rh --trgsurfreg sphere.reg --tval ./tmp.mris_preproc.3462/subject1.1.mgh --sval /output/january_2021/subject1/surf/rh.w-g.pct.mgh --sfmt curv --noreshape --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = subject1 srcval = /output/january_2021/subject1/surf/rh.w-g.pct.mgh srctype = curv trgsubject = fsaverage trgval = ./tmp.mris_preproc.3462/subject1.1.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/subject1/surf/rh.sphere.reg Loading source data Reading curvature file /output/january_2021/subject1/surf/rh.w-g.pct.mgh Reading source subject label mask rh.cortex.label masking the input Reading target surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Done Using surf2surf_nnfr() Mapping Source Volume onto Source Subject Surface surf2surf_nnfr: building source hash (res=16). Surf2Surf: Forward Loop (163842) surf2surf_nnfr: building target hash (res=16). Surf2Surf: Reverse Loop (120537) Reverse Loop had 24115 hits Surf2Surf: Dividing by number of hits (163842) INFO: nSrcLost = 0 nTrg121 = 146526, nTrgMulti = 17316, MnTrgMultiHits = 2.39264 nSrc121 = 85238, nSrcLost = 0, nSrcMulti = 35299, MnSrcMultiHits = 2.90997 Reading target space mask label rh.cortex.label masking the input Saving target data Saving to ./tmp.mris_preproc.3462/subject1.1.mgh ----------------------- mri_concat ./tmp.mris_preproc.3462/subject1.1.mgh --o rh.w-g.pct.mgh.fsaverage.mgh ninputs = 1 Checking inputs nframestot = 1 Allocing output Done allocing nframes = 1 Writing to rh.w-g.pct.mgh.fsaverage.mgh Cleaning up ----------------------- rm -r ./tmp.mris_preproc.3462 Thu Feb 11 02:21:54 UTC 2021 mris_preproc done PIDs (3143 3146 3150 3158 3169 3179 3195 3204 3218 3232 3252 3293 3308 3322 3340 3368 3386 3419 3451 3462) completed and logs appended. #-------------------------------------------- #@# Qdec Cache surf2surf lh thickness fwhm0 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm0.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh thickness fwhm5 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm5.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh thickness fwhm10 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm10.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh thickness fwhm15 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm15.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh thickness fwhm20 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm20.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh thickness fwhm25 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm25.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh area fwhm0 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm0.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh area fwhm5 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm5.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh area fwhm10 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm10.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh area fwhm15 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm15.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh area fwhm20 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm20.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh area fwhm25 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm25.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh area.pial fwhm0 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm0.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh area.pial fwhm5 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm5.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh area.pial fwhm10 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm10.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh area.pial fwhm15 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm15.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh area.pial fwhm20 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm20.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh area.pial fwhm25 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm25.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh volume fwhm0 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm0.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh volume fwhm5 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm5.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh volume fwhm10 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm10.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh volume fwhm15 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm15.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh volume fwhm20 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm20.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh volume fwhm25 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm25.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh curv fwhm0 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm0.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh curv fwhm5 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm5.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh curv fwhm10 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm10.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh curv fwhm15 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm15.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh curv fwhm20 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm20.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh curv fwhm25 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm25.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh sulc fwhm0 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm0.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh sulc fwhm5 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm5.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh sulc fwhm10 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm10.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh sulc fwhm15 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm15.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh sulc fwhm20 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm20.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh sulc fwhm25 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm25.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh white.K fwhm0 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm0.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh white.K fwhm5 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm5.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh white.K fwhm10 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm10.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh white.K fwhm15 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm15.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh white.K fwhm20 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm20.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh white.K fwhm25 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm25.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh white.H fwhm0 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm0.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh white.H fwhm5 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm5.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh white.H fwhm10 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm10.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh white.H fwhm15 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm15.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh white.H fwhm20 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm20.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh white.H fwhm25 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm25.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh jacobian_white fwhm0 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm0.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh jacobian_white fwhm5 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm5.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh jacobian_white fwhm10 fsaverage Thu Feb 11 02:21:56 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm10.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh jacobian_white fwhm15 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm15.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh jacobian_white fwhm20 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm20.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh jacobian_white fwhm25 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm25.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh w-g.pct.mgh fwhm0 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm0.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh w-g.pct.mgh fwhm5 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm5.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh w-g.pct.mgh fwhm10 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm10.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh w-g.pct.mgh fwhm15 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm15.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh w-g.pct.mgh fwhm20 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm20.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf lh w-g.pct.mgh fwhm25 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm25.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh thickness fwhm0 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm0.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh thickness fwhm5 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm5.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh thickness fwhm10 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm10.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh thickness fwhm15 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm15.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh thickness fwhm20 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm20.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh thickness fwhm25 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm25.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh area fwhm0 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm0.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh area fwhm5 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm5.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh area fwhm10 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm10.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh area fwhm15 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm15.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh area fwhm20 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm20.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh area fwhm25 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm25.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh area.pial fwhm0 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm0.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh area.pial fwhm5 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm5.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh area.pial fwhm10 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm10.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh area.pial fwhm15 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm15.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh area.pial fwhm20 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm20.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh area.pial fwhm25 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm25.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh volume fwhm0 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm0.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh volume fwhm5 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm5.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh volume fwhm10 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm10.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh volume fwhm15 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm15.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh volume fwhm20 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm20.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh volume fwhm25 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm25.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh curv fwhm0 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm0.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh curv fwhm5 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm5.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh curv fwhm10 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm10.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh curv fwhm15 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm15.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh curv fwhm20 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm20.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh curv fwhm25 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm25.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh sulc fwhm0 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm0.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh sulc fwhm5 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm5.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh sulc fwhm10 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm10.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh sulc fwhm15 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm15.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh sulc fwhm20 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm20.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh sulc fwhm25 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm25.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh white.K fwhm0 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm0.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh white.K fwhm5 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm5.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh white.K fwhm10 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm10.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh white.K fwhm15 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm15.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh white.K fwhm20 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm20.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh white.K fwhm25 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm25.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh white.H fwhm0 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm0.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh white.H fwhm5 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm5.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh white.H fwhm10 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm10.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh white.H fwhm15 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm15.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh white.H fwhm20 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm20.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh white.H fwhm25 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm25.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh jacobian_white fwhm0 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm0.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh jacobian_white fwhm5 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm5.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh jacobian_white fwhm10 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm10.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh jacobian_white fwhm15 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm15.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh jacobian_white fwhm20 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm20.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh jacobian_white fwhm25 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm25.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh w-g.pct.mgh fwhm0 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm0.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh w-g.pct.mgh fwhm5 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm5.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh w-g.pct.mgh fwhm10 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm10.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh w-g.pct.mgh fwhm15 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm15.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh w-g.pct.mgh fwhm20 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm20.fsaverage.mgh --cortex #-------------------------------------------- #@# Qdec Cache surf2surf rh w-g.pct.mgh fwhm25 fsaverage Thu Feb 11 02:21:57 UTC 2021 mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm25.fsaverage.mgh --cortex Waiting for PID 6728 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 6731 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 6734 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 6737 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 6740 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6740 is not a child of this shell Waiting for PID 6743 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 6746 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6746 is not a child of this shell Waiting for PID 6749 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6749 is not a child of this shell Waiting for PID 6752 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6752 is not a child of this shell Waiting for PID 6755 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6755 is not a child of this shell Waiting for PID 6758 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6758 is not a child of this shell Waiting for PID 6763 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6763 is not a child of this shell Waiting for PID 6766 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6766 is not a child of this shell Waiting for PID 6769 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6769 is not a child of this shell Waiting for PID 6772 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6772 is not a child of this shell Waiting for PID 6775 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6775 is not a child of this shell Waiting for PID 6778 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6778 is not a child of this shell Waiting for PID 6781 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6781 is not a child of this shell Waiting for PID 6784 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6784 is not a child of this shell Waiting for PID 6787 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6787 is not a child of this shell Waiting for PID 6790 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6790 is not a child of this shell Waiting for PID 6793 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6793 is not a child of this shell Waiting for PID 6796 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6796 is not a child of this shell Waiting for PID 6799 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6799 is not a child of this shell Waiting for PID 6802 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6802 is not a child of this shell Waiting for PID 6805 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6805 is not a child of this shell Waiting for PID 6808 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6808 is not a child of this shell Waiting for PID 6811 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6811 is not a child of this shell Waiting for PID 6814 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 6817 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 6820 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6820 is not a child of this shell Waiting for PID 6823 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6823 is not a child of this shell Waiting for PID 6826 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6826 is not a child of this shell Waiting for PID 6829 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6829 is not a child of this shell Waiting for PID 6832 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6832 is not a child of this shell Waiting for PID 6835 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 6841 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6841 is not a child of this shell Waiting for PID 6847 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6847 is not a child of this shell Waiting for PID 6856 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6856 is not a child of this shell Waiting for PID 6862 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6862 is not a child of this shell Waiting for PID 6871 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6871 is not a child of this shell Waiting for PID 6880 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 6886 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6886 is not a child of this shell Waiting for PID 6892 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6892 is not a child of this shell Waiting for PID 6907 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6907 is not a child of this shell Waiting for PID 6910 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6910 is not a child of this shell Waiting for PID 6919 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 6931 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6931 is not a child of this shell Waiting for PID 6946 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6946 is not a child of this shell Waiting for PID 6949 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 6955 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 6958 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 6965 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 6975 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6975 is not a child of this shell Waiting for PID 6978 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6978 is not a child of this shell Waiting for PID 6981 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6981 is not a child of this shell Waiting for PID 6984 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 6993 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 6993 is not a child of this shell Waiting for PID 6999 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7005 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 7005 is not a child of this shell Waiting for PID 7011 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 7011 is not a child of this shell Waiting for PID 7014 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7017 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7020 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7023 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7032 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 7032 is not a child of this shell Waiting for PID 7038 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... /opt/freesurfer/bin/reconbatchjobs: line 81: wait: pid 7038 is not a child of this shell Waiting for PID 7041 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7044 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7050 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7053 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7062 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7065 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7077 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7080 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7089 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7092 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7100 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7106 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7109 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7112 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7118 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7124 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7130 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7133 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7136 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7139 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7142 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7145 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7151 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7157 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7163 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7166 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7175 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7178 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7181 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7184 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7187 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7195 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7198 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7207 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7216 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7219 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7222 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7234 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7237 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7243 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7246 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7258 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7267 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7270 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7273 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7282 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7288 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7294 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7303 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7308 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7314 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7326 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... Waiting for PID 7338 of (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) to complete... mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm0.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.thickness.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label lh.cortex.label masking the input Saving target data Saving to lh.thickness.fwhm0.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm5.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.thickness.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to lh.thickness.fwhm5.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm10.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.thickness.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to lh.thickness.fwhm10.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm15.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.thickness.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 165 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 165 Saving target data Saving to lh.thickness.fwhm15.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm20.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.thickness.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to lh.thickness.fwhm20.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.thickness.fsaverage.mgh --tval lh.thickness.fwhm25.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.thickness.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to lh.thickness.fwhm25.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm0.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label lh.cortex.label masking the input Saving target data Saving to lh.area.fwhm0.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm5.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to lh.area.fwhm5.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm10.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to lh.area.fwhm10.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm15.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 165 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 165 Saving target data Saving to lh.area.fwhm15.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm20.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to lh.area.fwhm20.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.area.fsaverage.mgh --tval lh.area.fwhm25.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to lh.area.fwhm25.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm0.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.pial.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label lh.cortex.label masking the input Saving target data Saving to lh.area.pial.fwhm0.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm5.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.pial.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to lh.area.pial.fwhm5.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm10.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.pial.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to lh.area.pial.fwhm10.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm15.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.pial.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 165 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 165 Saving target data Saving to lh.area.pial.fwhm15.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm20.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.pial.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to lh.area.pial.fwhm20.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.area.pial.fsaverage.mgh --tval lh.area.pial.fwhm25.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.area.pial.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to lh.area.pial.fwhm25.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm0.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.volume.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label lh.cortex.label masking the input Saving target data Saving to lh.volume.fwhm0.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm5.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.volume.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to lh.volume.fwhm5.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm10.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.volume.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to lh.volume.fwhm10.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm15.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.volume.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 165 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 165 Saving target data Saving to lh.volume.fwhm15.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm20.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.volume.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to lh.volume.fwhm20.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.volume.fsaverage.mgh --tval lh.volume.fwhm25.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.volume.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to lh.volume.fwhm25.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm0.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.curv.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label lh.cortex.label masking the input Saving target data Saving to lh.curv.fwhm0.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm5.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.curv.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to lh.curv.fwhm5.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm10.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.curv.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to lh.curv.fwhm10.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm15.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.curv.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 165 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 165 Saving target data Saving to lh.curv.fwhm15.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm20.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.curv.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to lh.curv.fwhm20.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.curv.fsaverage.mgh --tval lh.curv.fwhm25.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.curv.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to lh.curv.fwhm25.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm0.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.sulc.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label lh.cortex.label masking the input Saving target data Saving to lh.sulc.fwhm0.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm5.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.sulc.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to lh.sulc.fwhm5.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm10.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.sulc.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to lh.sulc.fwhm10.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm15.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.sulc.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 165 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 165 Saving target data Saving to lh.sulc.fwhm15.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm20.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.sulc.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to lh.sulc.fwhm20.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.sulc.fsaverage.mgh --tval lh.sulc.fwhm25.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.sulc.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to lh.sulc.fwhm25.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm0.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.K.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label lh.cortex.label masking the input Saving target data Saving to lh.white.K.fwhm0.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm5.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.K.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to lh.white.K.fwhm5.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm10.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.K.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to lh.white.K.fwhm10.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm15.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.K.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 165 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 165 Saving target data Saving to lh.white.K.fwhm15.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm20.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.K.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to lh.white.K.fwhm20.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.white.K.fsaverage.mgh --tval lh.white.K.fwhm25.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.K.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to lh.white.K.fwhm25.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm0.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.H.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label lh.cortex.label masking the input Saving target data Saving to lh.white.H.fwhm0.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm5.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.H.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to lh.white.H.fwhm5.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm10.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.H.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to lh.white.H.fwhm10.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm15.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.H.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 165 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 165 Saving target data Saving to lh.white.H.fwhm15.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm20.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.H.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to lh.white.H.fwhm20.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.white.H.fsaverage.mgh --tval lh.white.H.fwhm25.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.white.H.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to lh.white.H.fwhm25.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm0.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.jacobian_white.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label lh.cortex.label masking the input Saving target data Saving to lh.jacobian_white.fwhm0.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm5.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.jacobian_white.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to lh.jacobian_white.fwhm5.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm10.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.jacobian_white.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to lh.jacobian_white.fwhm10.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm15.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.jacobian_white.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 165 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 165 Saving target data Saving to lh.jacobian_white.fwhm15.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm20.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.jacobian_white.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to lh.jacobian_white.fwhm20.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.jacobian_white.fsaverage.mgh --tval lh.jacobian_white.fwhm25.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.jacobian_white.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to lh.jacobian_white.fwhm25.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 0 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm0.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.w-g.pct.mgh.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label lh.cortex.label masking the input Saving target data Saving to lh.w-g.pct.mgh.fwhm0.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 5 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm5.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.w-g.pct.mgh.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to lh.w-g.pct.mgh.fwhm5.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 10 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm10.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.w-g.pct.mgh.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to lh.w-g.pct.mgh.fwhm10.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 15 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm15.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.w-g.pct.mgh.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 165 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 165 Saving target data Saving to lh.w-g.pct.mgh.fwhm15.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 20 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm20.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.w-g.pct.mgh.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to lh.w-g.pct.mgh.fwhm20.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi lh --fwhm 25 --sval lh.w-g.pct.mgh.fsaverage.mgh --tval lh.w-g.pct.mgh.fwhm25.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = lh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = lh.w-g.pct.mgh.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = lh trghemi = lh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = lh.cortex.label label-trg = lh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/lh.sphere.reg Loading source data Reading source subject label mask lh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label lh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to lh.w-g.pct.mgh.fwhm25.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm0.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.thickness.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label rh.cortex.label masking the input Saving target data Saving to rh.thickness.fwhm0.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm5.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.thickness.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to rh.thickness.fwhm5.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm10.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.thickness.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to rh.thickness.fwhm10.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm15.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.thickness.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 166 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 166 Saving target data Saving to rh.thickness.fwhm15.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm20.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.thickness.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to rh.thickness.fwhm20.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.thickness.fsaverage.mgh --tval rh.thickness.fwhm25.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.thickness.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.thickness.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to rh.thickness.fwhm25.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm0.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label rh.cortex.label masking the input Saving target data Saving to rh.area.fwhm0.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm5.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to rh.area.fwhm5.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm10.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to rh.area.fwhm10.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm15.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 166 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 166 Saving target data Saving to rh.area.fwhm15.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm20.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to rh.area.fwhm20.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.area.fsaverage.mgh --tval rh.area.fwhm25.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.area.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to rh.area.fwhm25.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm0.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.pial.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label rh.cortex.label masking the input Saving target data Saving to rh.area.pial.fwhm0.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm5.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.pial.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to rh.area.pial.fwhm5.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm10.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.pial.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to rh.area.pial.fwhm10.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm15.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.pial.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 166 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 166 Saving target data Saving to rh.area.pial.fwhm15.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm20.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.pial.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to rh.area.pial.fwhm20.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.area.pial.fsaverage.mgh --tval rh.area.pial.fwhm25.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.area.pial.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.area.pial.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to rh.area.pial.fwhm25.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm0.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.volume.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label rh.cortex.label masking the input Saving target data Saving to rh.volume.fwhm0.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm5.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.volume.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to rh.volume.fwhm5.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm10.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.volume.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to rh.volume.fwhm10.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm15.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.volume.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 166 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 166 Saving target data Saving to rh.volume.fwhm15.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm20.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.volume.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to rh.volume.fwhm20.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.volume.fsaverage.mgh --tval rh.volume.fwhm25.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.volume.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.volume.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to rh.volume.fwhm25.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm0.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.curv.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label rh.cortex.label masking the input Saving target data Saving to rh.curv.fwhm0.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm5.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.curv.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to rh.curv.fwhm5.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm10.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.curv.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to rh.curv.fwhm10.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm15.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.curv.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 166 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 166 Saving target data Saving to rh.curv.fwhm15.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm20.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.curv.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to rh.curv.fwhm20.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.curv.fsaverage.mgh --tval rh.curv.fwhm25.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.curv.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.curv.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to rh.curv.fwhm25.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm0.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.sulc.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label rh.cortex.label masking the input Saving target data Saving to rh.sulc.fwhm0.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm5.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.sulc.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to rh.sulc.fwhm5.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm10.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.sulc.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to rh.sulc.fwhm10.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm15.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.sulc.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 166 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 166 Saving target data Saving to rh.sulc.fwhm15.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm20.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.sulc.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to rh.sulc.fwhm20.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.sulc.fsaverage.mgh --tval rh.sulc.fwhm25.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.sulc.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.sulc.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to rh.sulc.fwhm25.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm0.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.K.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label rh.cortex.label masking the input Saving target data Saving to rh.white.K.fwhm0.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm5.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.K.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to rh.white.K.fwhm5.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm10.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.K.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to rh.white.K.fwhm10.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm15.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.K.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 166 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 166 Saving target data Saving to rh.white.K.fwhm15.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm20.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.K.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to rh.white.K.fwhm20.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.white.K.fsaverage.mgh --tval rh.white.K.fwhm25.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.white.K.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.K.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to rh.white.K.fwhm25.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm0.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.H.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label rh.cortex.label masking the input Saving target data Saving to rh.white.H.fwhm0.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm5.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.H.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to rh.white.H.fwhm5.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm10.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.H.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to rh.white.H.fwhm10.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm15.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.H.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 166 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 166 Saving target data Saving to rh.white.H.fwhm15.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm20.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.H.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to rh.white.H.fwhm20.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.white.H.fsaverage.mgh --tval rh.white.H.fwhm25.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.white.H.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.white.H.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to rh.white.H.fwhm25.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm0.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.jacobian_white.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label rh.cortex.label masking the input Saving target data Saving to rh.jacobian_white.fwhm0.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm5.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.jacobian_white.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to rh.jacobian_white.fwhm5.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm10.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.jacobian_white.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to rh.jacobian_white.fwhm10.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm15.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.jacobian_white.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 166 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 166 Saving target data Saving to rh.jacobian_white.fwhm15.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm20.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.jacobian_white.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to rh.jacobian_white.fwhm20.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.jacobian_white.fsaverage.mgh --tval rh.jacobian_white.fwhm25.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.jacobian_white.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.jacobian_white.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to rh.jacobian_white.fwhm25.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm0.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 0 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm0.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.w-g.pct.mgh.fwhm0.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 0 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Reading target space mask label rh.cortex.label masking the input Saving target data Saving to rh.w-g.pct.mgh.fwhm0.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm5.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 5 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm5.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.w-g.pct.mgh.fwhm5.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 5 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 5.000000, std = 2.123305, with 18 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 18 Saving target data Saving to rh.w-g.pct.mgh.fwhm5.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm10.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 10 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm10.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.w-g.pct.mgh.fwhm10.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 10 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 10.000000, std = 4.246609, with 74 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 74 Saving target data Saving to rh.w-g.pct.mgh.fwhm10.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm15.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 15 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm15.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.w-g.pct.mgh.fwhm15.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 15 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 15.000000, std = 6.369914, with 166 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 166 Saving target data Saving to rh.w-g.pct.mgh.fwhm15.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm20.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 20 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm20.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.w-g.pct.mgh.fwhm20.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 20 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 20.000000, std = 8.493218, with 294 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 294 Saving target data Saving to rh.w-g.pct.mgh.fwhm20.fsaverage.mgh mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm25.fsaverage.mgh --cortex $Id: mri_surf2surf.c,v 1.103 2015/11/05 22:07:33 greve Exp $ setenv SUBJECTS_DIR /output/january_2021 cd /output/january_2021/subject1/surf mri_surf2surf --prune --s fsaverage --hemi rh --fwhm 25 --sval rh.w-g.pct.mgh.fsaverage.mgh --tval rh.w-g.pct.mgh.fwhm25.fsaverage.mgh --cortex sysname Linux hostname 85b04e758063 machine x86_64 user root srcsubject = fsaverage srcval = rh.w-g.pct.mgh.fsaverage.mgh srctype = trgsubject = fsaverage trgval = rh.w-g.pct.mgh.fwhm25.fsaverage.mgh trgtype = srcsurfreg = sphere.reg trgsurfreg = sphere.reg srchemi = rh trghemi = rh frame = 0 fwhm-in = 0 fwhm-out = 25 label-src = rh.cortex.label label-trg = rh.cortex.label OKToRevFaceOrder = 1 UseDualHemi = 0 Reading source surface reg /output/january_2021/fsaverage/surf/rh.sphere.reg Loading source data Reading source subject label mask rh.cortex.label masking the input INFO: trgsubject = srcsubject Approximating gaussian smoothing of target with fwhm = 25.000000, std = 10.616523, with 460 iterations of nearest-neighbor smoothing Reading target space mask label rh.cortex.label Pruning output smoothing mask by thr: 1.175494e-38 NN smoothing output with n = 460 Saving target data Saving to rh.w-g.pct.mgh.fwhm25.fsaverage.mgh PIDs (6728 6731 6734 6737 6740 6743 6746 6749 6752 6755 6758 6763 6766 6769 6772 6775 6778 6781 6784 6787 6790 6793 6796 6799 6802 6805 6808 6811 6814 6817 6820 6823 6826 6829 6832 6835 6841 6847 6856 6862 6871 6880 6886 6892 6907 6910 6919 6931 6946 6949 6955 6958 6965 6975 6978 6981 6984 6993 6999 7005 7011 7014 7017 7020 7023 7032 7038 7041 7044 7050 7053 7062 7065 7077 7080 7089 7092 7100 7106 7109 7112 7118 7124 7130 7133 7136 7139 7142 7145 7151 7157 7163 7166 7175 7178 7181 7184 7187 7195 7198 7207 7216 7219 7222 7234 7237 7243 7246 7258 7267 7270 7273 7282 7288 7294 7303 7308 7314 7326 7338) completed and logs appended. Linux 85b04e758063 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux recon-all -s subject1 exited with ERRORS at Thu Feb 11 02:22:35 UTC 2021 To report a problem, see http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting #New# invocation of recon-all Thu Mar 18 09:24:57 MSK 2021 cd /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1 setenv SUBJECTS_DIR /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021 /home/yarkin/code/freesurfer/bin/recon-all -s subject1 -localGI subjid subject1 setenv SUBJECTS_DIR /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021 FREESURFER_HOME /home/yarkin/code/freesurfer Actual FREESURFER_HOME /home/yarkin/code/freesurfer build-stamp.txt: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 Linux Megatron 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux cputime unlimited filesize unlimited datasize unlimited stacksize 8192 kbytes coredumpsize 0 kbytes memoryuse unlimited vmemoryuse unlimited descriptors 1024 memorylocked 16384 kbytes maxproc 2063164 maxlocks unlimited maxsignal 2063164 maxmessage 819200 maxnice 0 maxrtprio 0 maxrttime unlimited total used free shared buff/cache available Mem: 503G 302G 39G 468M 161G 198G Swap: 63G 62G 2,0G ######################################## program versions used dev (freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93) dev ProgramName: lta_convert ProgramArguments: lta_convert -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_and ProgramArguments: mri_and -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_annotation2label ProgramArguments: mri_annotation2label -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_aparc2aseg ProgramArguments: mri_aparc2aseg -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_surf2volseg ProgramArguments: mri_surf2volseg -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_binarize ProgramArguments: mri_binarize -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_ca_label ProgramArguments: mri_ca_label -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_ca_normalize ProgramArguments: mri_ca_normalize -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_ca_register ProgramArguments: mri_ca_register -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_cc ProgramArguments: mri_cc -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_compute_overlap ProgramArguments: mri_compute_overlap -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_compute_seg_overlap ProgramArguments: mri_compute_seg_overlap -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_concat ProgramArguments: mri_concat -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_concatenate_lta ProgramArguments: mri_concatenate_lta -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 mri_convert -all-info ProgramName: mri_convert ProgramArguments: mri_convert -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_diff ProgramArguments: mri_diff -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_edit_wm_with_aseg ProgramArguments: mri_edit_wm_with_aseg -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_em_register ProgramArguments: mri_em_register -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_fill ProgramArguments: mri_fill -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_fuse_segmentations ProgramArguments: mri_fuse_segmentations -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_fwhm ProgramArguments: mri_fwhm -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_gcut ProgramArguments: mri_gcut -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_info ProgramArguments: mri_info -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_label2label ProgramArguments: mri_label2label -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_label2vol ProgramArguments: mri_label2vol -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_log_likelihood ProgramArguments: mri_log_likelihood -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_mask ProgramArguments: mri_mask -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_matrix_multiply ProgramArguments: mri_matrix_multiply -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_normalize ProgramArguments: mri_normalize -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_normalize_tp2 ProgramArguments: mri_normalize_tp2 -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_or ProgramArguments: mri_or -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_relabel_hypointensities ProgramArguments: mri_relabel_hypointensities -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_relabel_nonwm_hypos ProgramArguments: mri_relabel_nonwm_hypos -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_remove_neck ProgramArguments: mri_remove_neck -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 dev ProgramName: mri_robust_register ProgramArguments: mri_robust_register -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 dev ProgramName: mri_robust_template ProgramArguments: mri_robust_template -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_anatomical_stats ProgramArguments: mris_anatomical_stats -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_ca_label ProgramArguments: mris_ca_label -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_calc ProgramArguments: mris_calc -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_convert ProgramArguments: mris_convert -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_curvature ProgramArguments: mris_curvature -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_curvature_stats ProgramArguments: mris_curvature_stats -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_diff ProgramArguments: mris_diff -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_divide_parcellation ProgramArguments: mris_divide_parcellation -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_segment ProgramArguments: mri_segment -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_segstats ProgramArguments: mri_segstats -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_euler_number ProgramArguments: mris_euler_number -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_fix_topology ProgramArguments: mris_fix_topology -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_topo_fixer ProgramArguments: mris_topo_fixer -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_jacobian ProgramArguments: mris_jacobian -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_label2annot ProgramArguments: mris_label2annot -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_left_right_register ProgramArguments: mris_left_right_register -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_place_surface ProgramArguments: mris_place_surface -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mrisp_paint ProgramArguments: mrisp_paint -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_register ProgramArguments: mris_register -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_smooth ProgramArguments: mris_smooth -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_sphere ProgramArguments: mris_sphere -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_surface_stats ProgramArguments: mris_surface_stats -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_stats2seg ProgramArguments: mri_stats2seg -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_thickness ProgramArguments: mris_thickness -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_thickness_diff ProgramArguments: mris_thickness_diff -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_topo_fixer ProgramArguments: mris_topo_fixer -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_surf2surf ProgramArguments: mri_surf2surf -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_surf2vol ProgramArguments: mri_surf2vol -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_surfcluster ProgramArguments: mri_surfcluster -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mris_volmask ProgramArguments: mris_volmask -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_tessellate ProgramArguments: mri_tessellate -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_vol2surf ProgramArguments: mri_vol2surf -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_vol2vol ProgramArguments: mri_vol2vol -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_voldiff ProgramArguments: mri_voldiff -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: mri_watershed ProgramArguments: mri_watershed -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 ProgramName: tkregister2 ProgramArguments: tkregister2_cmdl -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 mri_motion_correct.fsl dev mri_convert -all-info ProgramName: mri_convert ProgramArguments: mri_convert -all-info ProgramVersion: dev TimeStamp: 2021/03/18-06:24:57-GMT BuildTime: Mar 16 2021 06:16:11 BuildStamp: freesurfer-linux-ubuntu18_x86_64-dev-20210316-7552d93 User: yarkin Machine: Megatron Platform: Linux PlatformVersion: 5.3.0-28-generic CompilerName: GCC CompilerVersion: 4.8.5 Program nu_correct, built from: Package MNI N3, version 1.12.0, compiled by nicks@terrier (x86_64-unknown-linux-gnu) on 2015-06-19 at 01:25:34 ####################################### GCADIR /home/yarkin/code/freesurfer/average GCA RB_all_2020-01-02.gca GCASkull RB_all_withskull_2020_01_02.gca AvgCurvTif folding.atlas.acfb40.noaparc.i12.2016-08-02.tif GCSDIR /home/yarkin/code/freesurfer/average GCS DKaparc.atlas.acfb40.noaparc.i12.2016-08-02.gcs ####################################### #@# white curv lh Thu Mar 18 09:24:57 MSK 2021 cd /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/mri mris_place_surface --curv-map ../surf/lh.white 2 10 ../surf/lh.curv Update not needed #@# white area lh Thu Mar 18 09:24:57 MSK 2021 cd /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/mri mris_place_surface --area-map ../surf/lh.white ../surf/lh.area Update not needed #@# pial curv lh Thu Mar 18 09:24:57 MSK 2021 cd /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/mri mris_place_surface --curv-map ../surf/lh.pial 2 10 ../surf/lh.curv.pial Update not needed #@# pial area lh Thu Mar 18 09:24:57 MSK 2021 cd /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/mri mris_place_surface --area-map ../surf/lh.pial ../surf/lh.area.pial Update not needed #@# thickness lh Thu Mar 18 09:24:57 MSK 2021 cd /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/mri mris_place_surface --thickness ../surf/lh.white ../surf/lh.pial 20 5 ../surf/lh.thickness Update not needed #@# area and vertex vol lh Thu Mar 18 09:24:57 MSK 2021 cd /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/mri mris_place_surface --thickness ../surf/lh.white ../surf/lh.pial 20 5 ../surf/lh.thickness Update not needed #@# white curv rh Thu Mar 18 09:24:57 MSK 2021 cd /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/mri mris_place_surface --curv-map ../surf/rh.white 2 10 ../surf/rh.curv Update not needed #@# white area rh Thu Mar 18 09:24:58 MSK 2021 cd /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/mri mris_place_surface --area-map ../surf/rh.white ../surf/rh.area Update not needed #@# pial curv rh Thu Mar 18 09:24:58 MSK 2021 cd /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/mri mris_place_surface --curv-map ../surf/rh.pial 2 10 ../surf/rh.curv.pial Update not needed #@# pial area rh Thu Mar 18 09:24:58 MSK 2021 cd /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/mri mris_place_surface --area-map ../surf/rh.pial ../surf/rh.area.pial Update not needed #@# thickness rh Thu Mar 18 09:24:58 MSK 2021 cd /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/mri mris_place_surface --thickness ../surf/rh.white ../surf/rh.pial 20 5 ../surf/rh.thickness Update not needed #@# area and vertex vol rh Thu Mar 18 09:24:58 MSK 2021 cd /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/mri mris_place_surface --thickness ../surf/rh.white ../surf/rh.pial 20 5 ../surf/rh.thickness Update not needed /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf #-------------------------------------------- #@# Local Gyrification Index lh Thu Mar 18 09:24:58 MSK 2021 mris_compute_lgi --i lh.pial ================= rm -Rf /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial ================= ================= mkdir -p /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial ================= ================= mris_fill -c -r 1 lh.pial /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.filled.mgz ================= reading surface from lh.pial... writing filled volume to /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.filled.mgz... conforming output volume setting resolution for intermediate calculations to 1.0000 ================= make_outer_surface('/home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.filled.mgz',15,'/home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial-outer'); exit ================= MATLAB is selecting SOFTWARE OPENGL rendering. < M A T L A B (R) > Copyright 1984-2021 The MathWorks, Inc. R2021a (9.10.0.1602886) 64-bit (glnxa64) February 17, 2021 Warning: Unable to create personal MATLAB work folder:/home/yarkin/Documents/MATLAB For online documentation, see https://www.mathworks.com/support For product information, visit www.mathworks.com. >> reading filled volume... closing volume... morphological closing done. writing outer surface... ================= mris_extract_main_component /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial-outer /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial-outer-main ================= counting number of connected components... 65310 voxel in cpt #1: X=2 [v=65310,e=195924,f=130616] located at (-28.994352, -11.785150, 41.051785) For the whole surface: X=2 [v=65310,e=195924,f=130616] One single component has been found nothing to do done ================= mris_smooth -nw -n 30 /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial-outer-main ./lh.pial-outer-smoothed ================= smoothing for 30 iterations smoothing surface tessellation for 30 iterations... smoothing complete - recomputing first and second fundamental forms... ================= mris_euler_number ./lh.pial-outer-smoothed ================= euler # = v-e+f = 2g-2: 65310 - 195924 + 130616 = 2 --> 0 holes F =2V-4: 130616 = 130620-4 (0) 2E=3F: 391848 = 391848 (0) total defect index = 0 ================= mris_convert -n lh.pial-outer-smoothed /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial-outer-smoothed-normals.asc ================= ================= find_corresponding_center_FSformat('lh.pial','lh.pial-outer-smoothed',100,'/home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial','/tmp/tmp.Qp94Lp.m'); exit ================= MATLAB is selecting SOFTWARE OPENGL rendering. < M A T L A B (R) > Copyright 1984-2021 The MathWorks, Inc. R2021a (9.10.0.1602886) 64-bit (glnxa64) February 17, 2021 Warning: Unable to create personal MATLAB work folder:/home/yarkin/Documents/MATLAB For online documentation, see https://www.mathworks.com/support For product information, visit www.mathworks.com. >> ...reading surface file: lh.pial ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.07 sec) ...reading surface file: lh.pial-outer-smoothed ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.01 sec) deltaT = 11.2400 ================= make_roi_paths('lh.pial','lh.pial-outer-smoothed',25,100,'/home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial','/tmp/tmp.x78TX4.m'); exit ================= MATLAB is selecting SOFTWARE OPENGL rendering. < M A T L A B (R) > Copyright 1984-2021 The MathWorks, Inc. R2021a (9.10.0.1602886) 64-bit (glnxa64) February 17, 2021 Warning: Unable to create personal MATLAB work folder:/home/yarkin/Documents/MATLAB For online documentation, see https://www.mathworks.com/support For product information, visit www.mathworks.com. >> loading datas ... ...reading surface file: lh.pial ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.06 sec) ...reading surface file: lh.pial-outer-smoothed ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.01 sec) preparing outer mesh structure ... face 5000 / 130616 face 10000 / 130616 face 15000 / 130616 face 20000 / 130616 face 25000 / 130616 face 30000 / 130616 face 35000 / 130616 face 40000 / 130616 face 45000 / 130616 face 50000 / 130616 face 55000 / 130616 face 60000 / 130616 face 65000 / 130616 face 70000 / 130616 face 75000 / 130616 face 80000 / 130616 face 85000 / 130616 face 90000 / 130616 face 95000 / 130616 face 100000 / 130616 face 105000 / 130616 face 110000 / 130616 face 115000 / 130616 face 120000 / 130616 face 125000 / 130616 face 130000 / 130616 mesh_outer = struct with fields: vertices: [65310x3 double] faces: [130616x3 double] facesOfVertex: [65310x1 struct] preparing pial mesh structure ... ...searching for mesh edges...done (79.89 sec). ... creating path file for vertex 1 / 65310 area file for outer ROIs saved at 1 ... creating path file for vertex 101 / 65310 ... creating path file for vertex 201 / 65310 ... creating path file for vertex 301 / 65310 ... creating path file for vertex 401 / 65310 ... creating path file for vertex 501 / 65310 ... creating path file for vertex 601 / 65310 ... creating path file for vertex 701 / 65310 ... creating path file for vertex 801 / 65310 ... creating path file for vertex 901 / 65310 ... creating path file for vertex 1001 / 65310 ... creating path file for vertex 1101 / 65310 ... creating path file for vertex 1201 / 65310 non geodesic regions removed from the patch ... creating path file for vertex 1301 / 65310 ... creating path file for vertex 1401 / 65310 ... creating path file for vertex 1501 / 65310 ... creating path file for vertex 1601 / 65310 ... creating path file for vertex 1701 / 65310 ... creating path file for vertex 1801 / 65310 ... creating path file for vertex 1901 / 65310 ... creating path file for vertex 2001 / 65310 ... creating path file for vertex 2101 / 65310 ... creating path file for vertex 2201 / 65310 ... creating path file for vertex 2301 / 65310 ... creating path file for vertex 2401 / 65310 ... creating path file for vertex 2501 / 65310 ... creating path file for vertex 2601 / 65310 ... creating path file for vertex 2701 / 65310 ... creating path file for vertex 2801 / 65310 ... creating path file for vertex 2901 / 65310 ... creating path file for vertex 3001 / 65310 ... creating path file for vertex 3101 / 65310 ... creating path file for vertex 3201 / 65310 ... creating path file for vertex 3301 / 65310 ... creating path file for vertex 3401 / 65310 ... creating path file for vertex 3501 / 65310 ... creating path file for vertex 3601 / 65310 ... creating path file for vertex 3701 / 65310 ... creating path file for vertex 3801 / 65310 ... creating path file for vertex 3901 / 65310 ... creating path file for vertex 4001 / 65310 ... creating path file for vertex 4101 / 65310 ... creating path file for vertex 4201 / 65310 ... creating path file for vertex 4301 / 65310 ... creating path file for vertex 4401 / 65310 ... creating path file for vertex 4501 / 65310 ... creating path file for vertex 4601 / 65310 ... creating path file for vertex 4701 / 65310 ... creating path file for vertex 4801 / 65310 ... creating path file for vertex 4901 / 65310 ... creating path file for vertex 5001 / 65310 area file for outer ROIs saved at 5001 ... creating path file for vertex 5101 / 65310 ... creating path file for vertex 5201 / 65310 ... creating path file for vertex 5301 / 65310 ... creating path file for vertex 5401 / 65310 ... creating path file for vertex 5501 / 65310 ... creating path file for vertex 5601 / 65310 ... creating path file for vertex 5701 / 65310 ... creating path file for vertex 5801 / 65310 ... creating path file for vertex 5901 / 65310 ... creating path file for vertex 6001 / 65310 ... creating path file for vertex 6101 / 65310 ... creating path file for vertex 6201 / 65310 ... creating path file for vertex 6301 / 65310 ... creating path file for vertex 6401 / 65310 ... creating path file for vertex 6501 / 65310 ... creating path file for vertex 6601 / 65310 ... creating path file for vertex 6701 / 65310 ... creating path file for vertex 6801 / 65310 ... creating path file for vertex 6901 / 65310 ... creating path file for vertex 7001 / 65310 ... creating path file for vertex 7101 / 65310 ... creating path file for vertex 7201 / 65310 ... creating path file for vertex 7301 / 65310 ... creating path file for vertex 7401 / 65310 ... creating path file for vertex 7501 / 65310 ... creating path file for vertex 7601 / 65310 ... creating path file for vertex 7701 / 65310 ... creating path file for vertex 7801 / 65310 ... creating path file for vertex 7901 / 65310 ... creating path file for vertex 8001 / 65310 ... creating path file for vertex 8101 / 65310 ... creating path file for vertex 8201 / 65310 ... creating path file for vertex 8301 / 65310 ... creating path file for vertex 8401 / 65310 ... creating path file for vertex 8501 / 65310 ... creating path file for vertex 8601 / 65310 ... creating path file for vertex 8701 / 65310 ... creating path file for vertex 8801 / 65310 ... creating path file for vertex 8901 / 65310 ... creating path file for vertex 9001 / 65310 ... creating path file for vertex 9101 / 65310 ... creating path file for vertex 9201 / 65310 ... creating path file for vertex 9301 / 65310 ... creating path file for vertex 9401 / 65310 ... creating path file for vertex 9501 / 65310 ... creating path file for vertex 9601 / 65310 ... creating path file for vertex 9701 / 65310 ... creating path file for vertex 9801 / 65310 ... creating path file for vertex 9901 / 65310 ... creating path file for vertex 10001 / 65310 area file for outer ROIs saved at 10001 ... creating path file for vertex 10101 / 65310 ... creating path file for vertex 10201 / 65310 ... creating path file for vertex 10301 / 65310 ... creating path file for vertex 10401 / 65310 ... creating path file for vertex 10501 / 65310 ... creating path file for vertex 10601 / 65310 ... creating path file for vertex 10701 / 65310 ... creating path file for vertex 10801 / 65310 ... creating path file for vertex 10901 / 65310 ... creating path file for vertex 11001 / 65310 ... creating path file for vertex 11101 / 65310 ... creating path file for vertex 11201 / 65310 ... creating path file for vertex 11301 / 65310 ... creating path file for vertex 11401 / 65310 ... creating path file for vertex 11501 / 65310 ... creating path file for vertex 11601 / 65310 ... creating path file for vertex 11701 / 65310 ... creating path file for vertex 11801 / 65310 ... creating path file for vertex 11901 / 65310 ... creating path file for vertex 12001 / 65310 ... creating path file for vertex 12101 / 65310 ... creating path file for vertex 12201 / 65310 ... creating path file for vertex 12301 / 65310 ... creating path file for vertex 12401 / 65310 ... creating path file for vertex 12501 / 65310 ... creating path file for vertex 12601 / 65310 ... creating path file for vertex 12701 / 65310 ... creating path file for vertex 12801 / 65310 ... creating path file for vertex 12901 / 65310 ... creating path file for vertex 13001 / 65310 ... creating path file for vertex 13101 / 65310 ... creating path file for vertex 13201 / 65310 ... creating path file for vertex 13301 / 65310 ... creating path file for vertex 13401 / 65310 ... creating path file for vertex 13501 / 65310 ... creating path file for vertex 13601 / 65310 ... creating path file for vertex 13701 / 65310 ... creating path file for vertex 13801 / 65310 ... creating path file for vertex 13901 / 65310 ... creating path file for vertex 14001 / 65310 ... creating path file for vertex 14101 / 65310 ... creating path file for vertex 14201 / 65310 ... creating path file for vertex 14301 / 65310 ... creating path file for vertex 14401 / 65310 ... creating path file for vertex 14501 / 65310 ... creating path file for vertex 14601 / 65310 ... creating path file for vertex 14701 / 65310 ... creating path file for vertex 14801 / 65310 ... creating path file for vertex 14901 / 65310 ... creating path file for vertex 15001 / 65310 area file for outer ROIs saved at 15001 ... creating path file for vertex 15101 / 65310 ... creating path file for vertex 15201 / 65310 ... creating path file for vertex 15301 / 65310 ... creating path file for vertex 15401 / 65310 ... creating path file for vertex 15501 / 65310 ... creating path file for vertex 15601 / 65310 ... creating path file for vertex 15701 / 65310 ... creating path file for vertex 15801 / 65310 ... creating path file for vertex 15901 / 65310 ... creating path file for vertex 16001 / 65310 ... creating path file for vertex 16101 / 65310 ... creating path file for vertex 16201 / 65310 ... creating path file for vertex 16301 / 65310 ... creating path file for vertex 16401 / 65310 ... creating path file for vertex 16501 / 65310 ... creating path file for vertex 16601 / 65310 ... creating path file for vertex 16701 / 65310 ... creating path file for vertex 16801 / 65310 ... creating path file for vertex 16901 / 65310 ... creating path file for vertex 17001 / 65310 ... creating path file for vertex 17101 / 65310 ... creating path file for vertex 17201 / 65310 ... creating path file for vertex 17301 / 65310 ... creating path file for vertex 17401 / 65310 ... creating path file for vertex 17501 / 65310 ... creating path file for vertex 17601 / 65310 ... creating path file for vertex 17701 / 65310 ... creating path file for vertex 17801 / 65310 ... creating path file for vertex 17901 / 65310 ... creating path file for vertex 18001 / 65310 ... creating path file for vertex 18101 / 65310 ... creating path file for vertex 18201 / 65310 ... creating path file for vertex 18301 / 65310 ... creating path file for vertex 18401 / 65310 ... creating path file for vertex 18501 / 65310 ... creating path file for vertex 18601 / 65310 ... creating path file for vertex 18701 / 65310 ... creating path file for vertex 18801 / 65310 ... creating path file for vertex 18901 / 65310 ... creating path file for vertex 19001 / 65310 ... creating path file for vertex 19101 / 65310 ... creating path file for vertex 19201 / 65310 ... creating path file for vertex 19301 / 65310 ... creating path file for vertex 19401 / 65310 ... creating path file for vertex 19501 / 65310 ... creating path file for vertex 19601 / 65310 ... creating path file for vertex 19701 / 65310 ... creating path file for vertex 19801 / 65310 ... creating path file for vertex 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vertex 23901 / 65310 ... creating path file for vertex 24001 / 65310 ... creating path file for vertex 24101 / 65310 ... creating path file for vertex 24201 / 65310 ... creating path file for vertex 24301 / 65310 ... creating path file for vertex 24401 / 65310 ... creating path file for vertex 24501 / 65310 ... creating path file for vertex 24601 / 65310 ... creating path file for vertex 24701 / 65310 ... creating path file for vertex 24801 / 65310 ... creating path file for vertex 24901 / 65310 ... creating path file for vertex 25001 / 65310 area file for outer ROIs saved at 25001 ... creating path file for vertex 25101 / 65310 ... creating path file for vertex 25201 / 65310 ... creating path file for vertex 25301 / 65310 ... creating path file for vertex 25401 / 65310 ... creating path file for vertex 25501 / 65310 ... creating path file for vertex 25601 / 65310 ... creating path file for vertex 25701 / 65310 ... creating path file for vertex 25801 / 65310 ... creating path file for vertex 25901 / 65310 ... creating path file for vertex 26001 / 65310 ... creating path file for vertex 26101 / 65310 ... creating path file for vertex 26201 / 65310 ... creating path file for vertex 26301 / 65310 ... creating path file for vertex 26401 / 65310 ... creating path file for vertex 26501 / 65310 ... creating path file for vertex 26601 / 65310 ... creating path file for vertex 26701 / 65310 ... creating path file for vertex 26801 / 65310 ... creating path file for vertex 26901 / 65310 ... creating path file for vertex 27001 / 65310 ... creating path file for vertex 27101 / 65310 ... creating path file for vertex 27201 / 65310 ... creating path file for vertex 27301 / 65310 ... creating path file for vertex 27401 / 65310 ... creating path file for vertex 27501 / 65310 ... creating path file for vertex 27601 / 65310 ... creating path file for vertex 27701 / 65310 ... creating path file for vertex 27801 / 65310 ... creating path file for vertex 27901 / 65310 ... creating path file for vertex 28001 / 65310 ... creating path file for vertex 28101 / 65310 ... creating path file for vertex 28201 / 65310 ... creating path file for vertex 28301 / 65310 ... creating path file for vertex 28401 / 65310 ... creating path file for vertex 28501 / 65310 ... creating path file for vertex 28601 / 65310 ... creating path file for vertex 28701 / 65310 ... creating path file for vertex 28801 / 65310 ... creating path file for vertex 28901 / 65310 ... creating path file for vertex 29001 / 65310 ... creating path file for vertex 29101 / 65310 ... creating path file for vertex 29201 / 65310 ... creating path file for vertex 29301 / 65310 ... creating path file for vertex 29401 / 65310 ... creating path file for vertex 29501 / 65310 ... creating path file for vertex 29601 / 65310 ... creating path file for vertex 29701 / 65310 ... creating path file for vertex 29801 / 65310 ... creating path file for vertex 29901 / 65310 ... creating path file for vertex 30001 / 65310 area file for outer ROIs saved at 30001 ... creating path file for vertex 30101 / 65310 ... creating path file for vertex 30201 / 65310 ... creating path file for vertex 30301 / 65310 ... creating path file for vertex 30401 / 65310 ... creating path file for vertex 30501 / 65310 ... creating path file for vertex 30601 / 65310 ... creating path file for vertex 30701 / 65310 ... creating path file for vertex 30801 / 65310 ... creating path file for vertex 30901 / 65310 ... creating path file for vertex 31001 / 65310 ... creating path file for vertex 31101 / 65310 ... creating path file for vertex 31201 / 65310 ... creating path file for vertex 31301 / 65310 ... creating path file for vertex 31401 / 65310 ... creating path file for vertex 31501 / 65310 ... creating path file for vertex 31601 / 65310 ... creating path file for vertex 31701 / 65310 ... creating path file for vertex 31801 / 65310 ... creating path file for vertex 31901 / 65310 ... creating path file for vertex 32001 / 65310 ... 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65310 ... creating path file for vertex 34201 / 65310 ... creating path file for vertex 34301 / 65310 ... creating path file for vertex 34401 / 65310 ... creating path file for vertex 34501 / 65310 ... creating path file for vertex 34601 / 65310 ... creating path file for vertex 34701 / 65310 ... creating path file for vertex 34801 / 65310 ... creating path file for vertex 34901 / 65310 ... creating path file for vertex 35001 / 65310 area file for outer ROIs saved at 35001 ... creating path file for vertex 35101 / 65310 ... creating path file for vertex 35201 / 65310 ... creating path file for vertex 35301 / 65310 ... creating path file for vertex 35401 / 65310 ... creating path file for vertex 35501 / 65310 ... creating path file for vertex 35601 / 65310 ... creating path file for vertex 35701 / 65310 ... creating path file for vertex 35801 / 65310 ... creating path file for vertex 35901 / 65310 ... creating path file for vertex 36001 / 65310 ... creating path file for vertex 36101 / 65310 ... creating path file for vertex 36201 / 65310 ... creating path file for vertex 36301 / 65310 ... creating path file for vertex 36401 / 65310 ... creating path file for vertex 36501 / 65310 ... creating path file for vertex 36601 / 65310 ... creating path file for vertex 36701 / 65310 ... creating path file for vertex 36801 / 65310 ... creating path file for vertex 36901 / 65310 ... creating path file for vertex 37001 / 65310 ... creating path file for vertex 37101 / 65310 ... creating path file for vertex 37201 / 65310 ... creating path file for vertex 37301 / 65310 ... creating path file for vertex 37401 / 65310 ... creating path file for vertex 37501 / 65310 ... creating path file for vertex 37601 / 65310 ... creating path file for vertex 37701 / 65310 ... creating path file for vertex 37801 / 65310 ... creating path file for vertex 37901 / 65310 ... creating path file for vertex 38001 / 65310 ... creating path file for vertex 38101 / 65310 ... creating path file for vertex 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vertex 42301 / 65310 ... creating path file for vertex 42401 / 65310 ... creating path file for vertex 42501 / 65310 ... creating path file for vertex 42601 / 65310 ... creating path file for vertex 42701 / 65310 ... creating path file for vertex 42801 / 65310 ... creating path file for vertex 42901 / 65310 ... creating path file for vertex 43001 / 65310 ... creating path file for vertex 43101 / 65310 ... creating path file for vertex 43201 / 65310 ... creating path file for vertex 43301 / 65310 ... creating path file for vertex 43401 / 65310 ... creating path file for vertex 43501 / 65310 ... creating path file for vertex 43601 / 65310 ... creating path file for vertex 43701 / 65310 ... creating path file for vertex 43801 / 65310 ... creating path file for vertex 43901 / 65310 ... creating path file for vertex 44001 / 65310 ... creating path file for vertex 44101 / 65310 ... creating path file for vertex 44201 / 65310 ... creating path file for vertex 44301 / 65310 ... creating path file for vertex 44401 / 65310 ... creating path file for vertex 44501 / 65310 ... creating path file for vertex 44601 / 65310 ... creating path file for vertex 44701 / 65310 ... creating path file for vertex 44801 / 65310 ... creating path file for vertex 44901 / 65310 ... creating path file for vertex 45001 / 65310 area file for outer ROIs saved at 45001 ... creating path file for vertex 45101 / 65310 ... creating path file for vertex 45201 / 65310 ... creating path file for vertex 45301 / 65310 ... creating path file for vertex 45401 / 65310 ... creating path file for vertex 45501 / 65310 ... creating path file for vertex 45601 / 65310 ... creating path file for vertex 45701 / 65310 ... creating path file for vertex 45801 / 65310 ... creating path file for vertex 45901 / 65310 ... creating path file for vertex 46001 / 65310 ... creating path file for vertex 46101 / 65310 ... creating path file for vertex 46201 / 65310 ... creating path file for vertex 46301 / 65310 ... creating path file for vertex 46401 / 65310 ... creating path file for vertex 46501 / 65310 ... creating path file for vertex 46601 / 65310 ... creating path file for vertex 46701 / 65310 ... creating path file for vertex 46801 / 65310 ... creating path file for vertex 46901 / 65310 ... creating path file for vertex 47001 / 65310 ... creating path file for vertex 47101 / 65310 ... creating path file for vertex 47201 / 65310 ... creating path file for vertex 47301 / 65310 ... creating path file for vertex 47401 / 65310 ... creating path file for vertex 47501 / 65310 ... creating path file for vertex 47601 / 65310 ... creating path file for vertex 47701 / 65310 ... creating path file for vertex 47801 / 65310 ... creating path file for vertex 47901 / 65310 ... creating path file for vertex 48001 / 65310 ... creating path file for vertex 48101 / 65310 ... creating path file for vertex 48201 / 65310 ... creating path file for vertex 48301 / 65310 ... creating path file for vertex 48401 / 65310 ... creating path file for vertex 48501 / 65310 ... creating path file for vertex 48601 / 65310 ... creating path file for vertex 48701 / 65310 ... creating path file for vertex 48801 / 65310 ... creating path file for vertex 48901 / 65310 ... creating path file for vertex 49001 / 65310 ... creating path file for vertex 49101 / 65310 ... creating path file for vertex 49201 / 65310 ... creating path file for vertex 49301 / 65310 ... creating path file for vertex 49401 / 65310 ... creating path file for vertex 49501 / 65310 ... creating path file for vertex 49601 / 65310 ... creating path file for vertex 49701 / 65310 ... creating path file for vertex 49801 / 65310 ... creating path file for vertex 49901 / 65310 ... creating path file for vertex 50001 / 65310 area file for outer ROIs saved at 50001 ... creating path file for vertex 50101 / 65310 ... creating path file for vertex 50201 / 65310 ... creating path file for vertex 50301 / 65310 ... creating path file for vertex 50401 / 65310 ... creating path file for vertex 50501 / 65310 ... creating path file for vertex 50601 / 65310 ... creating path file for vertex 50701 / 65310 ... creating path file for vertex 50801 / 65310 ... creating path file for vertex 50901 / 65310 ... creating path file for vertex 51001 / 65310 ... creating path file for vertex 51101 / 65310 ... creating path file for vertex 51201 / 65310 ... creating path file for vertex 51301 / 65310 ... creating path file for vertex 51401 / 65310 ... creating path file for vertex 51501 / 65310 ... creating path file for vertex 51601 / 65310 ... creating path file for vertex 51701 / 65310 ... creating path file for vertex 51801 / 65310 ... creating path file for vertex 51901 / 65310 ... creating path file for vertex 52001 / 65310 ... creating path file for vertex 52101 / 65310 ... creating path file for vertex 52201 / 65310 ... creating path file for vertex 52301 / 65310 ... creating path file for vertex 52401 / 65310 ... creating path file for vertex 52501 / 65310 ... creating path file for vertex 52601 / 65310 ... creating path file for vertex 52701 / 65310 ... creating path file for vertex 52801 / 65310 ... creating path file for vertex 52901 / 65310 ... creating path file for vertex 53001 / 65310 ... creating path file for vertex 53101 / 65310 ... creating path file for vertex 53201 / 65310 ... creating path file for vertex 53301 / 65310 ... creating path file for vertex 53401 / 65310 ... creating path file for vertex 53501 / 65310 ... creating path file for vertex 53601 / 65310 ... creating path file for vertex 53701 / 65310 ... creating path file for vertex 53801 / 65310 ... creating path file for vertex 53901 / 65310 ... creating path file for vertex 54001 / 65310 ... creating path file for vertex 54101 / 65310 ... creating path file for vertex 54201 / 65310 ... creating path file for vertex 54301 / 65310 ... creating path file for vertex 54401 / 65310 ... creating path file for vertex 54501 / 65310 ... creating path file for vertex 54601 / 65310 ... creating path file for vertex 54701 / 65310 ... creating path file for vertex 54801 / 65310 ... creating path file for vertex 54901 / 65310 ... creating path file for vertex 55001 / 65310 area file for outer ROIs saved at 55001 ... creating path file for vertex 55101 / 65310 ... creating path file for vertex 55201 / 65310 ... creating path file for vertex 55301 / 65310 ... creating path file for vertex 55401 / 65310 ... creating path file for vertex 55501 / 65310 ... creating path file for vertex 55601 / 65310 ... creating path file for vertex 55701 / 65310 ... creating path file for vertex 55801 / 65310 ... creating path file for vertex 55901 / 65310 ... creating path file for vertex 56001 / 65310 ... creating path file for vertex 56101 / 65310 ... creating path file for vertex 56201 / 65310 ... creating path file for vertex 56301 / 65310 ... creating path file for vertex 56401 / 65310 ... creating path file for vertex 56501 / 65310 ... creating path file for vertex 56601 / 65310 non geodesic regions removed from the patch ... creating path file for vertex 56701 / 65310 ... creating path file for vertex 56801 / 65310 ... creating path file for vertex 56901 / 65310 ... creating path file for vertex 57001 / 65310 ... creating path file for vertex 57101 / 65310 ... creating path file for vertex 57201 / 65310 ... creating path file for vertex 57301 / 65310 ... creating path file for vertex 57401 / 65310 ... creating path file for vertex 57501 / 65310 ... creating path file for vertex 57601 / 65310 ... creating path file for vertex 57701 / 65310 ... creating path file for vertex 57801 / 65310 ... creating path file for vertex 57901 / 65310 ... creating path file for vertex 58001 / 65310 ... creating path file for vertex 58101 / 65310 ... creating path file for vertex 58201 / 65310 ... creating path file for vertex 58301 / 65310 ... creating path file for vertex 58401 / 65310 ... creating path file for vertex 58501 / 65310 ... creating path file for vertex 58601 / 65310 ... creating path file for vertex 58701 / 65310 ... creating path file for vertex 58801 / 65310 ... creating path file for vertex 58901 / 65310 ... creating path file for vertex 59001 / 65310 ... creating path file for vertex 59101 / 65310 ... creating path file for vertex 59201 / 65310 ... creating path file for vertex 59301 / 65310 ... creating path file for vertex 59401 / 65310 ... creating path file for vertex 59501 / 65310 ... creating path file for vertex 59601 / 65310 ... creating path file for vertex 59701 / 65310 ... creating path file for vertex 59801 / 65310 ... creating path file for vertex 59901 / 65310 ... creating path file for vertex 60001 / 65310 area file for outer ROIs saved at 60001 ... creating path file for vertex 60101 / 65310 ... creating path file for vertex 60201 / 65310 ... creating path file for vertex 60301 / 65310 ... creating path file for vertex 60401 / 65310 ... creating path file for vertex 60501 / 65310 ... creating path file for vertex 60601 / 65310 ... creating path file for vertex 60701 / 65310 ... creating path file for vertex 60801 / 65310 ... creating path file for vertex 60901 / 65310 ... creating path file for vertex 61001 / 65310 ... creating path file for vertex 61101 / 65310 ... creating path file for vertex 61201 / 65310 ... creating path file for vertex 61301 / 65310 ... creating path file for vertex 61401 / 65310 ... creating path file for vertex 61501 / 65310 ... creating path file for vertex 61601 / 65310 ... creating path file for vertex 61701 / 65310 ... creating path file for vertex 61801 / 65310 ... creating path file for vertex 61901 / 65310 ... creating path file for vertex 62001 / 65310 ... creating path file for vertex 62101 / 65310 ... creating path file for vertex 62201 / 65310 ... creating path file for vertex 62301 / 65310 ... creating path file for vertex 62401 / 65310 ... creating path file for vertex 62501 / 65310 ... creating path file for vertex 62601 / 65310 ... creating path file for vertex 62701 / 65310 ... creating path file for vertex 62801 / 65310 ... creating path file for vertex 62901 / 65310 ... creating path file for vertex 63001 / 65310 ... creating path file for vertex 63101 / 65310 ... creating path file for vertex 63201 / 65310 ... creating path file for vertex 63301 / 65310 ... creating path file for vertex 63401 / 65310 ... creating path file for vertex 63501 / 65310 ... creating path file for vertex 63601 / 65310 ... creating path file for vertex 63701 / 65310 ... creating path file for vertex 63801 / 65310 ... creating path file for vertex 63901 / 65310 ... creating path file for vertex 64001 / 65310 ... creating path file for vertex 64101 / 65310 ... creating path file for vertex 64201 / 65310 ... creating path file for vertex 64301 / 65310 ... creating path file for vertex 64401 / 65310 ... creating path file for vertex 64501 / 65310 ... creating path file for vertex 64601 / 65310 ... creating path file for vertex 64701 / 65310 ... creating path file for vertex 64801 / 65310 ... creating path file for vertex 64901 / 65310 ... creating path file for vertex 65001 / 65310 area file for outer ROIs saved at 65001 ... creating path file for vertex 65101 / 65310 ... creating path file for vertex 65201 / 65310 ... creating path file for vertex 65301 / 65310 saving area file in matlab format... DONE. deltaT = 5.5840e+03 ================= mri_path2label --confillxfn lh.pial /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/mri_path2label.input ================= Reading lh.pial Connecting and filling vertices in path at fillseed 86 Finding path............................................................................................................................................................................................................................................................................................................................................................................................. done Filling 86 nlabel 7756 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.000001.label Connecting and filling vertices in path at fillseed 114531 Finding path............................................................................................................................................................................... done Filling 114531 nlabel 5375 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.000101.label Connecting and filling vertices in path at fillseed 78 Finding path............................................................................................................................................................................................................................................................. done Filling 78 nlabel 7856 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.000201.label Connecting and filling vertices in path at fillseed 343 Finding path............................................................................................................................................................................................................................................................................................................................. done Filling 343 nlabel 7461 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.000301.label Connecting and filling vertices in path at fillseed 51 Finding path.................................................................................................................................................................................................................................................................................... done Filling 51 nlabel 7785 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.000401.label Connecting and filling vertices in path at fillseed 632 Finding path........................................................................................................................................................................................................................................................................................................................................................................................... done Filling 632 nlabel 8572 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.000501.label Connecting and filling vertices in path at fillseed 661 Finding path............................................................................................................................................................................................................................................... done Filling 661 nlabel 6964 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.000601.label Connecting and filling vertices in path at fillseed 234 Finding path......................................................................................................................................................................................................................................................................................................... done Filling 234 nlabel 6978 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.000701.label Connecting and filling vertices in path at fillseed 602 Finding path.................................................................................................................................................................................................................................................................................................... done Filling 602 nlabel 7670 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.000801.label Connecting and filling vertices in path at fillseed 357 Finding path................................................................................................................................................................................................................................................... done Filling 357 nlabel 6908 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.000901.label Connecting and filling vertices in path at fillseed 115149 Finding path......................................................................................................................................................................................................................................... done Filling 115149 nlabel 6758 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.001001.label Connecting and filling vertices in path at fillseed 879 Finding path......................................................................................................................................................................................................................................................................... done Filling 879 nlabel 7803 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.001101.label Connecting and filling vertices in path at fillseed 114790 Finding path................................................................................................................................................................................................................................... done Filling 114790 nlabel 6828 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.001201.label Connecting and filling vertices in path at fillseed 1562 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 1562 nlabel 7635 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.001301.label Connecting and filling vertices in path at fillseed 1172 Finding path.................................................................................................................................................................................................................................................................................................................. done Filling 1172 nlabel 7636 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.001401.label Connecting and filling vertices in path at fillseed 115327 Finding path................................................................................... done Filling 115327 nlabel 4783 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.001501.label Connecting and filling vertices in path at fillseed 115150 Finding path..................................................................................................................................................................................................................................................................... done Filling 115150 nlabel 6873 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.001601.label Connecting and filling vertices in path at fillseed 1507 Finding path............................................................................................................................................. done Filling 1507 nlabel 4434 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.001701.label Connecting and filling vertices in path at fillseed 115370 Finding path................................................................................................. done Filling 115370 nlabel 4502 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.001801.label Connecting and filling vertices in path at fillseed 1652 Finding path................................................................................................................................................................................................................... done Filling 1652 nlabel 7838 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.001901.label Connecting and filling vertices in path at fillseed 1637 Finding path..................................................................................................................................................................................................................................................... done Filling 1637 nlabel 7418 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.002001.label Connecting and filling vertices in path at fillseed 3391 Finding path.......................................................................................................................................................................................................................... done Filling 3391 nlabel 6841 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.002101.label Connecting and filling vertices in path at fillseed 1688 Finding path..................................................................................................................................................................................................................................................................................................................................................... done Filling 1688 nlabel 5920 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.002201.label Connecting and filling vertices in path at fillseed 2543 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 2543 nlabel 7681 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.002301.label Connecting and filling vertices in path at fillseed 1968 Finding path................................................................................................................ done Filling 1968 nlabel 4716 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.002401.label Connecting and filling vertices in path at fillseed 2128 Finding path............................................................................................................................................................................................................................................................................................................... done Filling 2128 nlabel 7533 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.002501.label Connecting and filling vertices in path at fillseed 2787 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 2787 nlabel 9271 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.002601.label Connecting and filling vertices in path at fillseed 2424 Finding path............................................................................................................................................... done Filling 2424 nlabel 4556 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.002701.label Connecting and filling vertices in path at fillseed 3006 Finding path.................................................................................................................................................................................................................................................................................................................................. done Filling 3006 nlabel 8595 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.002801.label Connecting and filling vertices in path at fillseed 2815 Finding path................................................................................................................................................................................................................................................................... done Filling 2815 nlabel 6565 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.002901.label Connecting and filling vertices in path at fillseed 2577 Finding path........................................................................................................................................................................................................................................................................................................................... done Filling 2577 nlabel 6334 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.003001.label Connecting and filling vertices in path at fillseed 3532 Finding path....................................................................................................................................................................................................................................................................................................................................... done Filling 3532 nlabel 6359 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.003101.label Connecting and filling vertices in path at fillseed 2947 Finding path..................................................................................... done Filling 2947 nlabel 4780 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.003201.label Connecting and filling vertices in path at fillseed 3215 Finding path........................................................................................................................................................................................................................................................ done Filling 3215 nlabel 6676 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.003301.label Connecting and filling vertices in path at fillseed 2843 Finding path........................................................................................................................................................................................................................................................... done Filling 2843 nlabel 7785 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.003401.label Connecting and filling vertices in path at fillseed 3526 Finding path...................................................................................................................................................................................................................................................................................................................... done Filling 3526 nlabel 6361 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.003501.label Connecting and filling vertices in path at fillseed 4048 Finding path.................................................................................................................................................................................. done Filling 4048 nlabel 5288 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.003601.label Connecting and filling vertices in path at fillseed 5183 Finding path........................................................................................................................................................................................... done Filling 5183 nlabel 5337 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.003701.label Connecting and filling vertices in path at fillseed 3741 Finding path........................................................................................................................................................................................................................................................................ done Filling 3741 nlabel 7181 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.003801.label Connecting and filling vertices in path at fillseed 115720 Finding path....................................................................................................................................................................................................................................................................................................... done Filling 115720 nlabel 6046 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.003901.label Connecting and filling vertices in path at fillseed 115447 Finding path...................................................................................... done Filling 115447 nlabel 4437 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.004001.label Connecting and filling vertices in path at fillseed 115242 Finding path................................................................................................................................................................................................................................................................................ done Filling 115242 nlabel 7729 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.004101.label Connecting and filling vertices in path at fillseed 5180 Finding path...................................................................................................................................................................................................................................................................................................... done Filling 5180 nlabel 5347 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.004201.label Connecting and filling vertices in path at fillseed 114906 Finding path................................................................................................................................................................................................................................................................................................... done Filling 114906 nlabel 5908 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.004301.label Connecting and filling vertices in path at fillseed 5283 Finding path.................................................................................................................................................................................................................................................................................... done Filling 5283 nlabel 6701 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.004401.label Connecting and filling vertices in path at fillseed 4769 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 4769 nlabel 10036 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.004501.label Connecting and filling vertices in path at fillseed 5804 Finding path.......................................................................................................................................................................................................................................... done Filling 5804 nlabel 4895 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.004601.label Connecting and filling vertices in path at fillseed 4244 Finding path......................................................................................................................................................................................................................................................................................................................... done Filling 4244 nlabel 8093 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.004701.label Connecting and filling vertices in path at fillseed 5939 Finding path............................................................................................................................................................................................................................... done Filling 5939 nlabel 6174 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.004801.label Connecting and filling vertices in path at fillseed 6005 Finding path..................................................................................................................................................................................................................................................................................................................................................... done Filling 6005 nlabel 7950 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.004901.label Connecting and filling vertices in path at fillseed 8075 Finding path............................................................................................................................................................................................................................................. done Filling 8075 nlabel 6804 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.005001.label Connecting and filling vertices in path at fillseed 115761 Finding path............................................................................................................................................................................................ done Filling 115761 nlabel 6725 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.005101.label Connecting and filling vertices in path at fillseed 4963 Finding path...................................................................................................................................................................................................................................................................................................... done Filling 4963 nlabel 7490 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.005201.label Connecting and filling vertices in path at fillseed 6657 Finding path............................................................................................................................................................................................................................................................................. done Filling 6657 nlabel 5996 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.005301.label Connecting and filling vertices in path at fillseed 6744 Finding path............................................................................................................................................................................................................................................................................................................................. done Filling 6744 nlabel 8079 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.005401.label Connecting and filling vertices in path at fillseed 7266 Finding path................................................................................................................................................................................................................................ done Filling 7266 nlabel 6500 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.005501.label Connecting and filling vertices in path at fillseed 6130 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................. done Filling 6130 nlabel 8247 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.005601.label Connecting and filling vertices in path at fillseed 115482 Finding path............................................................................................................................... done Filling 115482 nlabel 4935 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.005701.label Connecting and filling vertices in path at fillseed 7437 Finding path................................................................................................................................................................................................................ done Filling 7437 nlabel 5215 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.005801.label Connecting and filling vertices in path at fillseed 8126 Finding path..................................................................................................................................................................................................... done Filling 8126 nlabel 6442 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.005901.label Connecting and filling vertices in path at fillseed 7689 Finding path......................................................................................................................................................................................................................................................................................................... done Filling 7689 nlabel 8183 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.006001.label Connecting and filling vertices in path at fillseed 7462 Finding path........................................................................................................................................................................................................................................................................................................................................ done Filling 7462 nlabel 7190 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.006101.label Connecting and filling vertices in path at fillseed 7619 Finding path.............................................................................................................................................................................................................................................................................................................................. done Filling 7619 nlabel 8301 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.006201.label Connecting and filling vertices in path at fillseed 8965 Finding path......................................................................................................................................................................................................... done Filling 8965 nlabel 6722 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.006301.label Connecting and filling vertices in path at fillseed 6415 Finding path................................................................................................................................................................................................................................... done Filling 6415 nlabel 8189 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.006401.label Connecting and filling vertices in path at fillseed 6625 Finding path............................................................................................................................................................................. done Filling 6625 nlabel 5101 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.006501.label Connecting and filling vertices in path at fillseed 9237 Finding path..................................................................................................................................................................... done Filling 9237 nlabel 5416 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.006601.label Connecting and filling vertices in path at fillseed 9953 Finding path........................................................................................................................................................................................................................ done Filling 9953 nlabel 4979 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.006701.label Connecting and filling vertices in path at fillseed 8895 Finding path.................................................................................................................................................................................................................................................................. done Filling 8895 nlabel 8353 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.006801.label Connecting and filling vertices in path at fillseed 8376 Finding path.................................................................................................................................................................................................................................................................... done Filling 8376 nlabel 6269 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.006901.label Connecting and filling vertices in path at fillseed 8520 Finding path................................................................................................................................................................................................................................................................................................................ done Filling 8520 nlabel 8826 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.007001.label Connecting and filling vertices in path at fillseed 9954 Finding path...................................................................................................................................................................................... done Filling 9954 nlabel 4706 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.007101.label Connecting and filling vertices in path at fillseed 10791 Finding path..................................................................................................................................................................................................................................................... done Filling 10791 nlabel 6777 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.007201.label Connecting and filling vertices in path at fillseed 115041 Finding path............................................................................................................................................................................................................................................................................... done Filling 115041 nlabel 7236 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.007301.label Connecting and filling vertices in path at fillseed 10203 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 10203 nlabel 9220 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.007401.label Connecting and filling vertices in path at fillseed 10615 Finding path........................................................................................................................................................................................................... done Filling 10615 nlabel 6816 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.007501.label Connecting and filling vertices in path at fillseed 8586 Finding path................................................................................................................................................................................................................................................................................................................ done Filling 8586 nlabel 8233 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.007601.label Connecting and filling vertices in path at fillseed 115222 Finding path.......................................................................................................................................................................................................................................................................................................................................................................... done Filling 115222 nlabel 7001 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.007701.label Connecting and filling vertices in path at fillseed 10166 Finding path............................................................................................................. done Filling 10166 nlabel 5786 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.007801.label Connecting and filling vertices in path at fillseed 11468 Finding path................................................................................................................................................................................................................ done Filling 11468 nlabel 6641 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.007901.label Connecting and filling vertices in path at fillseed 12216 Finding path.................................................................................................................................................................................................................................................................................................................................................................... done Filling 12216 nlabel 8474 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.008001.label Connecting and filling vertices in path at fillseed 12827 Finding path........................................................................................................................................................................................................................................................................................................................................................................... done Filling 12827 nlabel 7444 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.008101.label Connecting and filling vertices in path at fillseed 11914 Finding path................................................................................................................................................................................................................................................................................................................................................................................... done Filling 11914 nlabel 8087 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.008201.label Connecting and filling vertices in path at fillseed 11938 Finding path..................................................................................................................................................................................................................................................................................................................................................................................... done Filling 11938 nlabel 9377 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.008301.label Connecting and filling vertices in path at fillseed 11479 Finding path........................................................................................................................................................................................................................................................................................................................... done Filling 11479 nlabel 6430 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.008401.label Connecting and filling vertices in path at fillseed 13052 Finding path.................................................................................................................................................................................................................................................................................... done Filling 13052 nlabel 7979 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.008501.label Connecting and filling vertices in path at fillseed 11746 Finding path............................................................................................................................................................................................................................................................................ done Filling 11746 nlabel 6968 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.008601.label Connecting and filling vertices in path at fillseed 11926 Finding path......................................................................................................................................................................................................................................................................................................................................................... done Filling 11926 nlabel 9760 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.008701.label Connecting and filling vertices in path at fillseed 12739 Finding path..................................................................................................... done Filling 12739 nlabel 4658 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.008801.label Connecting and filling vertices in path at fillseed 12333 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 12333 nlabel 10137 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.008901.label Connecting and filling vertices in path at fillseed 12857 Finding path.................................................................................................................................................................................................................................................................................................................................... done Filling 12857 nlabel 7254 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.009001.label Connecting and filling vertices in path at fillseed 11926 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 11926 nlabel 9667 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.009101.label Connecting and filling vertices in path at fillseed 12374 Finding path....................................................................................................................................................................................................................................................................................................................................... done Filling 12374 nlabel 5268 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.009201.label Connecting and filling vertices in path at fillseed 14030 Finding path............................................................................................................................................................................................................................................................................................................................................................. done Filling 14030 nlabel 7042 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.009301.label Connecting and filling vertices in path at fillseed 10091 Finding path........................................................................................................................................................................................................... done Filling 10091 nlabel 4832 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.009401.label Connecting and filling vertices in path at fillseed 12785 Finding path.................................................................................................................................... done Filling 12785 nlabel 5402 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.009501.label Connecting and filling vertices in path at fillseed 12624 Finding path............................................................................................................................................................................................................................................................ done Filling 12624 nlabel 5659 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.009601.label Connecting and filling vertices in path at fillseed 14119 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 14119 nlabel 9673 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.009701.label Connecting and filling vertices in path at fillseed 16286 Finding path..................................................................................................................................................................................................................................................................................................................................................... done Filling 16286 nlabel 7082 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.009801.label Connecting and filling vertices in path at fillseed 13694 Finding path...................................................................................................................... done Filling 13694 nlabel 5474 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.009901.label Connecting and filling vertices in path at fillseed 12648 Finding path.................................................................................................................................................................................................................. done Filling 12648 nlabel 4876 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.010001.label Connecting and filling vertices in path at fillseed 14964 Finding path............................................................................................................................................................................................................................................................................................................................................... done Filling 14964 nlabel 8098 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.010101.label Connecting and filling vertices in path at fillseed 17202 Finding path................................................................................................................................................................................................................................................... done Filling 17202 nlabel 6243 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.010201.label Connecting and filling vertices in path at fillseed 14699 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 14699 nlabel 10210 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.010301.label Connecting and filling vertices in path at fillseed 13561 Finding path........................................................................................................................................................................................................... done Filling 13561 nlabel 5102 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.010401.label Connecting and filling vertices in path at fillseed 15044 Finding path................................................................................................................................................................................................................... done Filling 15044 nlabel 5078 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.010501.label Connecting and filling vertices in path at fillseed 15420 Finding path............................................................................................................................................................................................................................................. done Filling 15420 nlabel 6621 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.010601.label Connecting and filling vertices in path at fillseed 17184 Finding path................................................................................................................. done Filling 17184 nlabel 5986 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.010701.label Connecting and filling vertices in path at fillseed 13305 Finding path......................................................................................................................................................................................................................................................................................... done Filling 13305 nlabel 5532 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.010801.label Connecting and filling vertices in path at fillseed 15009 Finding path........................................................................................................................................................................................................... done Filling 15009 nlabel 5226 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.010901.label Connecting and filling vertices in path at fillseed 18074 Finding path.................................................................................................................................................................................................................................. done Filling 18074 nlabel 6178 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.011001.label Connecting and filling vertices in path at fillseed 16489 Finding path............................................................................................................................................................................................................................................................................................................................................................................................... done Filling 16489 nlabel 9849 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.011101.label Connecting and filling vertices in path at fillseed 15438 Finding path........................................................................................................................................................................... done Filling 15438 nlabel 4853 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.011201.label Connecting and filling vertices in path at fillseed 16688 Finding path............................................................................................................................................................................................................................................... done Filling 16688 nlabel 7005 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.011301.label Connecting and filling vertices in path at fillseed 18975 Finding path........................................................................................................................................................................................................................................................................ done Filling 18975 nlabel 5548 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.011401.label Connecting and filling vertices in path at fillseed 19801 Finding path..................................................................................................................................... done Filling 19801 nlabel 5843 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.011501.label Connecting and filling vertices in path at fillseed 19245 Finding path....................................................................................................................................................................................................................................................... done Filling 19245 nlabel 8058 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.011601.label Connecting and filling vertices in path at fillseed 17867 Finding path................................................................................................................................................................................................................................................................................. done Filling 17867 nlabel 7296 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.011701.label Connecting and filling vertices in path at fillseed 18089 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 18089 nlabel 9121 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.011801.label Connecting and filling vertices in path at fillseed 19156 Finding path............................................................................................................................................................................................................................................................................................................................................. done Filling 19156 nlabel 9242 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.011901.label Connecting and filling vertices in path at fillseed 20057 Finding path................................................................................................................................................................................................................................................ done Filling 20057 nlabel 8724 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.012001.label Connecting and filling vertices in path at fillseed 19829 Finding path................................................................................................................................................................................................................................. done Filling 19829 nlabel 7294 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.012101.label Connecting and filling vertices in path at fillseed 18030 Finding path..................................................................................................................................................................................................................................................................................... done Filling 18030 nlabel 6434 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.012201.label Connecting and filling vertices in path at fillseed 17146 Finding path............................................................................................................................... done Filling 17146 nlabel 4685 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.012301.label Connecting and filling vertices in path at fillseed 20036 Finding path.................................................................................................................................................................................................................................. done Filling 20036 nlabel 8327 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.012401.label Connecting and filling vertices in path at fillseed 21168 Finding path................................................................................................................................................................................................................................................................................................................................... done Filling 21168 nlabel 9101 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.012501.label Connecting and filling vertices in path at fillseed 20600 Finding path....................................................................................................................................................................................................................................... done Filling 20600 nlabel 6936 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.012601.label Connecting and filling vertices in path at fillseed 21508 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 21508 nlabel 9507 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.012701.label Connecting and filling vertices in path at fillseed 21575 Finding path.......................................................................................................................................................................................................................................................................................................................................... done Filling 21575 nlabel 10283 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.012801.label Connecting and filling vertices in path at fillseed 20756 Finding path........................................................................................................................................................................................................................................................................................................................................................................... done Filling 20756 nlabel 9668 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.012901.label Connecting and filling vertices in path at fillseed 18544 Finding path...................................................................................................................................................................................................... done Filling 18544 nlabel 6079 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.013001.label Connecting and filling vertices in path at fillseed 21190 Finding path............................................................................................................................................................................................................................................................ done Filling 21190 nlabel 8044 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.013101.label Connecting and filling vertices in path at fillseed 19775 Finding path........................................................................................................................................................................................................................................................................................ done Filling 19775 nlabel 6045 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.013201.label Connecting and filling vertices in path at fillseed 23471 Finding path............................................................................................................................................................................................................................................................................................................................. done Filling 23471 nlabel 10085 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.013301.label Connecting and filling vertices in path at fillseed 23566 Finding path...................................................................................................................................................................................................................................................................................... done Filling 23566 nlabel 9560 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.013401.label Connecting and filling vertices in path at fillseed 22632 Finding path.................................................................................................................................................................................................. done Filling 22632 nlabel 7606 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.013501.label Connecting and filling vertices in path at fillseed 21498 Finding path.......................................................................................................................................................................................................................................................... done Filling 21498 nlabel 7158 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.013601.label Connecting and filling vertices in path at fillseed 21513 Finding path.............................................................................................................................................................................................................................................................................................................................................................. done Filling 21513 nlabel 9704 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.013701.label Connecting and filling vertices in path at fillseed 27676 Finding path.......................................................................................................................................................................................................................... done Filling 27676 nlabel 5884 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.013801.label Connecting and filling vertices in path at fillseed 24445 Finding path........................................................................................................................................................................................................................................................ done Filling 24445 nlabel 8040 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.013901.label Connecting and filling vertices in path at fillseed 21381 Finding path............................................................................................................................................................................................................. done Filling 21381 nlabel 6486 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.014001.label Connecting and filling vertices in path at fillseed 23423 Finding path...................................................................................................................................................................................................................................................................................................................................................... done Filling 23423 nlabel 9831 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.014101.label Connecting and filling vertices in path at fillseed 22056 Finding path.......................................................................................................................................................................................... done Filling 22056 nlabel 5559 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.014201.label Connecting and filling vertices in path at fillseed 23567 Finding path...................................................................................................................................................................................................... done Filling 23567 nlabel 7344 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.014301.label Connecting and filling vertices in path at fillseed 23246 Finding path...................................................................................................................................................................................................................... done Filling 23246 nlabel 7420 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.014401.label Connecting and filling vertices in path at fillseed 21445 Finding path........................................................................................................ done Filling 21445 nlabel 6079 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.014501.label Connecting and filling vertices in path at fillseed 25229 Finding path................................................................................................................................... done Filling 25229 nlabel 4432 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.014601.label Connecting and filling vertices in path at fillseed 24444 Finding path.................................................................................................................................................................................................................................................... done Filling 24444 nlabel 7926 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.014701.label Connecting and filling vertices in path at fillseed 25135 Finding path........................................................................................................................................................................................................................................................................................................................... done Filling 25135 nlabel 7309 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.014801.label Connecting and filling vertices in path at fillseed 115854 Finding path......................................................................................................... done Filling 115854 nlabel 6511 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.014901.label Connecting and filling vertices in path at fillseed 26030 Finding path............................................................................................................................................................................. done Filling 26030 nlabel 5433 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.015001.label Connecting and filling vertices in path at fillseed 25452 Finding path.................................................................................................................................................................................................................................................... done Filling 25452 nlabel 8130 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.015101.label Connecting and filling vertices in path at fillseed 26216 Finding path............................................................................................................................................................................................................................................................................................................................... done Filling 26216 nlabel 7592 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.015201.label Connecting and filling vertices in path at fillseed 25357 Finding path............................................................................................................................................................................................................................................................................................................................................... done Filling 25357 nlabel 10338 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.015301.label Connecting and filling vertices in path at fillseed 22044 Finding path.......................................................................................................................................................... done Filling 22044 nlabel 5657 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.015401.label Connecting and filling vertices in path at fillseed 29275 Finding path............................................................................................................................................................................................................................. done Filling 29275 nlabel 6775 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.015501.label Connecting and filling vertices in path at fillseed 25186 Finding path....................................................................................................................................................................................................................................... done Filling 25186 nlabel 7044 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.015601.label Connecting and filling vertices in path at fillseed 28017 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 28017 nlabel 9998 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.015701.label Connecting and filling vertices in path at fillseed 24249 Finding path........................................................................................................................................................................... done Filling 24249 nlabel 4585 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.015801.label Connecting and filling vertices in path at fillseed 27123 Finding path...................................................................................................................................................................................................................................................................................................... done Filling 27123 nlabel 7401 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.015901.label Connecting and filling vertices in path at fillseed 28899 Finding path............................................................................................................................................................................................................................................................................................................... done Filling 28899 nlabel 7297 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.016001.label Connecting and filling vertices in path at fillseed 28877 Finding path................................................................................................................................................................ done Filling 28877 nlabel 5844 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.016101.label Connecting and filling vertices in path at fillseed 27801 Finding path.............................................................................................................................................................................. done Filling 27801 nlabel 5418 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.016201.label Connecting and filling vertices in path at fillseed 29290 Finding path...................................................................................................................................................................................................................................................... done Filling 29290 nlabel 8337 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.016301.label Connecting and filling vertices in path at fillseed 26956 Finding path................................................................................................................................................................................................................................................................................................... done Filling 26956 nlabel 7839 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.016401.label Connecting and filling vertices in path at fillseed 28866 Finding path............................................................................................................................ done Filling 28866 nlabel 5777 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.016501.label Connecting and filling vertices in path at fillseed 27050 Finding path.................................................................................................................... done Filling 27050 nlabel 4292 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.016601.label Connecting and filling vertices in path at fillseed 28377 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 28377 nlabel 7486 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.016701.label Connecting and filling vertices in path at fillseed 31328 Finding path................................................................................................................................................................................................................................................................................................. done Filling 31328 nlabel 9493 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.016801.label Connecting and filling vertices in path at fillseed 116439 Finding path..................................................................................................................................................................................................................... done Filling 116439 nlabel 6880 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.016901.label Connecting and filling vertices in path at fillseed 29944 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 29944 nlabel 11779 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.017001.label Connecting and filling vertices in path at fillseed 29369 Finding path....................................................................................................................................................................... done Filling 29369 nlabel 5543 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.017101.label Connecting and filling vertices in path at fillseed 31139 Finding path.............................................................................................................................................................. done Filling 31139 nlabel 7297 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.017201.label Connecting and filling vertices in path at fillseed 30781 Finding path...................................................................................................................................................................................................................................................................................................................................................................................... done Filling 30781 nlabel 7761 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.017301.label Connecting and filling vertices in path at fillseed 30860 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 30860 nlabel 10377 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.017401.label Connecting and filling vertices in path at fillseed 31917 Finding path.................................................................................................................................................................................................................................................................................................................................................................................. done Filling 31917 nlabel 7354 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.017501.label Connecting and filling vertices in path at fillseed 29889 Finding path....................................................................................................................................................................................... done Filling 29889 nlabel 7237 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.017601.label Connecting and filling vertices in path at fillseed 31657 Finding path.............................................................................................................................................................................................................................................................................................. done Filling 31657 nlabel 7170 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.017701.label Connecting and filling vertices in path at fillseed 115920 Finding path..................................................................................................................................................................................................... done Filling 115920 nlabel 5142 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.017801.label Connecting and filling vertices in path at fillseed 32716 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 32716 nlabel 7875 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.017901.label Connecting and filling vertices in path at fillseed 30845 Finding path...................................................................................................................................................................................... done Filling 30845 nlabel 7809 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.018001.label Connecting and filling vertices in path at fillseed 32458 Finding path.................................................................................................................................................................................................................................................................................................................................... done Filling 32458 nlabel 7765 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.018101.label Connecting and filling vertices in path at fillseed 31754 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 31754 nlabel 11078 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.018201.label Connecting and filling vertices in path at fillseed 30240 Finding path.............................................................................................................................................................................................................................................................................................. done Filling 30240 nlabel 9063 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.018301.label Connecting and filling vertices in path at fillseed 116585 Finding path.............................................................................................................................................................................................................................................................................................................................................. done Filling 116585 nlabel 8730 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.018401.label Connecting and filling vertices in path at fillseed 32460 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 32460 nlabel 6797 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.018501.label Connecting and filling vertices in path at fillseed 34073 Finding path............................................................................................................................. done Filling 34073 nlabel 5639 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.018601.label Connecting and filling vertices in path at fillseed 34258 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 34258 nlabel 11458 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.018701.label Connecting and filling vertices in path at fillseed 34427 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 34427 nlabel 7138 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.018801.label Connecting and filling vertices in path at fillseed 34195 Finding path........................................................................................................................................................................................................... done Filling 34195 nlabel 7442 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.018901.label Connecting and filling vertices in path at fillseed 34096 Finding path.............................................................................................................................................................................................................................................................................................................................................. done Filling 34096 nlabel 7553 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.019001.label Connecting and filling vertices in path at fillseed 34939 Finding path..................................................................................................................... done Filling 34939 nlabel 5630 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.019101.label Connecting and filling vertices in path at fillseed 31470 Finding path............................................................................................................................................................................................................................................................................................................... done Filling 31470 nlabel 5644 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.019201.label Connecting and filling vertices in path at fillseed 34442 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 34442 nlabel 7124 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.019301.label Connecting and filling vertices in path at fillseed 34958 Finding path........................................................................................................................................................................................................... done Filling 34958 nlabel 5929 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.019401.label Connecting and filling vertices in path at fillseed 35782 Finding path.................................................................................................................................................................................................................................................................................................. done Filling 35782 nlabel 5731 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.019501.label Connecting and filling vertices in path at fillseed 37437 Finding path......................................................................................................................................... done Filling 37437 nlabel 5073 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.019601.label Connecting and filling vertices in path at fillseed 35229 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 35229 nlabel 8268 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.019701.label Connecting and filling vertices in path at fillseed 35086 Finding path..................................................................................................................................................................................................................... done Filling 35086 nlabel 7411 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.019801.label Connecting and filling vertices in path at fillseed 33980 Finding path......................................................................................................................................................................................................................................................................................................... done Filling 33980 nlabel 8550 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.019901.label Connecting and filling vertices in path at fillseed 35799 Finding path........................................................................................................................................ done Filling 35799 nlabel 5730 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.020001.label Connecting and filling vertices in path at fillseed 37438 Finding path..................................................................................................................... done Filling 37438 nlabel 4833 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.020101.label Connecting and filling vertices in path at fillseed 36167 Finding path.................................................................................................................................................................................................................................................................................................................................... done Filling 36167 nlabel 7704 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.020201.label Connecting and filling vertices in path at fillseed 116601 Finding path................................................................................................................................................................................................................................................................................................. done Filling 116601 nlabel 8913 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.020301.label Connecting and filling vertices in path at fillseed 36646 Finding path..................................................................................................................................................................................................................................................... done Filling 36646 nlabel 8190 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.020401.label Connecting and filling vertices in path at fillseed 37270 Finding path........................................................................................................................................................................................................................................................................................ done Filling 37270 nlabel 6064 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.020501.label Connecting and filling vertices in path at fillseed 36084 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 36084 nlabel 8594 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.020601.label Connecting and filling vertices in path at fillseed 38331 Finding path........................................................................................................................................................................................... done Filling 38331 nlabel 5515 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.020701.label Connecting and filling vertices in path at fillseed 34862 Finding path......................................................................................................................................................................................................................................................................................................................................... done Filling 34862 nlabel 7816 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.020801.label Connecting and filling vertices in path at fillseed 37287 Finding path...................................................................................................................................................................................................................................................................... done Filling 37287 nlabel 6265 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.020901.label Connecting and filling vertices in path at fillseed 37040 Finding path.................................................................................................................................................................................................................................................................................................................................................................................... done Filling 37040 nlabel 7342 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.021001.label Connecting and filling vertices in path at fillseed 36299 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 36299 nlabel 6457 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.021101.label Connecting and filling vertices in path at fillseed 36563 Finding path.................................................................................................................................................................................................................................................................................................................................................................................... done Filling 36563 nlabel 7570 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.021201.label Connecting and filling vertices in path at fillseed 42658 Finding path............................................................................................................................................................................... done Filling 42658 nlabel 5229 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.021301.label Connecting and filling vertices in path at fillseed 37884 Finding path.......................................................................................................................................................................................................................................................................................................................... done Filling 37884 nlabel 7035 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.021401.label Connecting and filling vertices in path at fillseed 39212 Finding path...................................................................................................................................................................................................... done Filling 39212 nlabel 5844 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.021501.label Connecting and filling vertices in path at fillseed 36553 Finding path............................................................................................................................................................................................................................................................................................................................................... done Filling 36553 nlabel 6350 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.021601.label Connecting and filling vertices in path at fillseed 39344 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 39344 nlabel 10608 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.021701.label Connecting and filling vertices in path at fillseed 37764 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 37764 nlabel 7699 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.021801.label Connecting and filling vertices in path at fillseed 40744 Finding path............................................................................................................................................................................................................................................................................................................................ done Filling 40744 nlabel 8767 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.021901.label Connecting and filling vertices in path at fillseed 38363 Finding path................................................................................................................................................................................................................................................................................... done Filling 38363 nlabel 7950 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.022001.label Connecting and filling vertices in path at fillseed 39874 Finding path............................................................................................................................................................................................................................................................................................................................................................................................. done Filling 39874 nlabel 7239 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.022101.label Connecting and filling vertices in path at fillseed 115940 Finding path................................................................................................................................................................................................................................................................................................................................... done Filling 115940 nlabel 5307 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.022201.label Connecting and filling vertices in path at fillseed 41577 Finding path......................................................................................................................................................................................................................................................................................................................................................................... done Filling 41577 nlabel 6695 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.022301.label Connecting and filling vertices in path at fillseed 40670 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 40670 nlabel 6639 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.022401.label Connecting and filling vertices in path at fillseed 42777 Finding path.............................................................................................................................................................................................................................................................................................. done Filling 42777 nlabel 8232 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.022501.label Connecting and filling vertices in path at fillseed 38432 Finding path................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 38432 nlabel 10995 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.022601.label Connecting and filling vertices in path at fillseed 40272 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 40272 nlabel 10741 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.022701.label Connecting and filling vertices in path at fillseed 38681 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 38681 nlabel 7886 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.022801.label Connecting and filling vertices in path at fillseed 40340 Finding path.............................................................................................................................................................................................................................. done Filling 40340 nlabel 7103 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.022901.label Connecting and filling vertices in path at fillseed 42773 Finding path....................................................................................................................................................................................................................................... done Filling 42773 nlabel 8268 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.023001.label Connecting and filling vertices in path at fillseed 43599 Finding path.................................................................................................................................................................................................. done Filling 43599 nlabel 4799 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.023101.label Connecting and filling vertices in path at fillseed 116009 Finding path............................................................................................................................................................... done Filling 116009 nlabel 4666 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.023201.label Connecting and filling vertices in path at fillseed 44072 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 44072 nlabel 7928 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.023301.label Connecting and filling vertices in path at fillseed 43869 Finding path................................................................................................................................................... done Filling 43869 nlabel 6671 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.023401.label Connecting and filling vertices in path at fillseed 116883 Finding path................................................................................................................................................................................................................................................................................................................................................................. done Filling 116883 nlabel 7317 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.023501.label Connecting and filling vertices in path at fillseed 41072 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 41072 nlabel 8216 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.023601.label Connecting and filling vertices in path at fillseed 38263 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 38263 nlabel 7471 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.023701.label Connecting and filling vertices in path at fillseed 44903 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 44903 nlabel 8783 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.023801.label Connecting and filling vertices in path at fillseed 43322 Finding path........................................................................................................................................................................................................................................................................................................................................................................ done Filling 43322 nlabel 6912 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.023901.label Connecting and filling vertices in path at fillseed 45325 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 45325 nlabel 8284 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.024001.label Connecting and filling vertices in path at fillseed 42479 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 42479 nlabel 6476 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.024101.label Connecting and filling vertices in path at fillseed 44480 Finding path.................................................................................................................................................... done Filling 44480 nlabel 3972 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.024201.label Connecting and filling vertices in path at fillseed 45693 Finding path................................................................................................................................................................................ done Filling 45693 nlabel 6574 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.024301.label Connecting and filling vertices in path at fillseed 42757 Finding path.................................................................................................................................................................................................................................................................................. done Filling 42757 nlabel 5882 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.024401.label Connecting and filling vertices in path at fillseed 43668 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 43668 nlabel 9951 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.024501.label Connecting and filling vertices in path at fillseed 42479 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 42479 nlabel 6590 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.024601.label Connecting and filling vertices in path at fillseed 44758 Finding path................................................................................................................................................................................................................................................................................................................................. done Filling 44758 nlabel 7916 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.024701.label Connecting and filling vertices in path at fillseed 45615 Finding path..................................................................................................................................................................................... done Filling 45615 nlabel 6734 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.024801.label Connecting and filling vertices in path at fillseed 45372 Finding path.............................................................................................................................................................................................................................................................................................................................. done Filling 45372 nlabel 8202 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.024901.label Connecting and filling vertices in path at fillseed 45452 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 45452 nlabel 10592 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.025001.label Connecting and filling vertices in path at fillseed 44479 Finding path............................................................................................................................................. done Filling 44479 nlabel 4050 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.025101.label Connecting and filling vertices in path at fillseed 46602 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 46602 nlabel 9284 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.025201.label Connecting and filling vertices in path at fillseed 43640 Finding path........................................................................................................................................................................................................................ done Filling 43640 nlabel 6528 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.025301.label Connecting and filling vertices in path at fillseed 46164 Finding path............................................................................................................................................................................................................................................................................................................................................................................ done Filling 46164 nlabel 7511 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.025401.label Connecting and filling vertices in path at fillseed 47751 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 47751 nlabel 7260 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.025501.label Connecting and filling vertices in path at fillseed 48346 Finding path............................................................................................................................................................................................................................................................................................................................................................................. done Filling 48346 nlabel 8221 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.025601.label Connecting and filling vertices in path at fillseed 116994 Finding path........................................................................................................................................................................................................................................................................................................................ done Filling 116994 nlabel 7136 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.025701.label Connecting and filling vertices in path at fillseed 47029 Finding path.................................................................................................................................................................................................................................................................................................................................... done Filling 47029 nlabel 8386 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.025801.label Connecting and filling vertices in path at fillseed 46189 Finding path........................................................................................................................................................ done Filling 46189 nlabel 5483 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.025901.label Connecting and filling vertices in path at fillseed 46173 Finding path....................................................................................................................................... done Filling 46173 nlabel 4467 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.026001.label Connecting and filling vertices in path at fillseed 47444 Finding path........................................................................................................................................................................................................................................................................................................................................ done Filling 47444 nlabel 6949 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.026101.label Connecting and filling vertices in path at fillseed 48818 Finding path........................................................................................................................................................................................................................................................................ done Filling 48818 nlabel 6453 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.026201.label Connecting and filling vertices in path at fillseed 48755 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 48755 nlabel 6894 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.026301.label Connecting and filling vertices in path at fillseed 48456 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 48456 nlabel 6706 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.026401.label Connecting and filling vertices in path at fillseed 47520 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 47520 nlabel 7796 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.026501.label Connecting and filling vertices in path at fillseed 49799 Finding path................................................................................................................................................................... done Filling 49799 nlabel 5919 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.026601.label Connecting and filling vertices in path at fillseed 50657 Finding path...................................................................................................................................................................................................... done Filling 50657 nlabel 7663 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.026701.label Connecting and filling vertices in path at fillseed 50441 Finding path.................................................................................................................................................................................................................................................................................................................................................... done Filling 50441 nlabel 8223 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.026801.label Connecting and filling vertices in path at fillseed 47119 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 47119 nlabel 10394 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.026901.label Connecting and filling vertices in path at fillseed 50616 Finding path..................................................................................................................................... done Filling 50616 nlabel 4596 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.027001.label Connecting and filling vertices in path at fillseed 49277 Finding path........................................................................................................................................................................................................................................................................................................................................ done Filling 49277 nlabel 7340 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.027101.label Connecting and filling vertices in path at fillseed 50654 Finding path........................................................................................................................................................... done Filling 50654 nlabel 6076 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.027201.label Connecting and filling vertices in path at fillseed 48731 Finding path........................................................................................................................................................................................................................................................................................................................................................................ done Filling 48731 nlabel 7873 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.027301.label Connecting and filling vertices in path at fillseed 49722 Finding path............................................................................................................................................. done Filling 49722 nlabel 4985 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.027401.label Connecting and filling vertices in path at fillseed 115981 Finding path......................................................................................................................................................................................................................................................................................................................................................................................... done Filling 115981 nlabel 4942 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.027501.label Connecting and filling vertices in path at fillseed 50719 Finding path................................................................................................................................................ done Filling 50719 nlabel 6236 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.027601.label Connecting and filling vertices in path at fillseed 49491 Finding path..................................................................................................................................................................................................................... done Filling 49491 nlabel 7053 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.027701.label Connecting and filling vertices in path at fillseed 51543 Finding path............................................................................................................................................................................................................................................................................................................................................................... done Filling 51543 nlabel 8464 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.027801.label Connecting and filling vertices in path at fillseed 50751 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 50751 nlabel 10120 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.027901.label Connecting and filling vertices in path at fillseed 51165 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 51165 nlabel 7720 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.028001.label Connecting and filling vertices in path at fillseed 51568 Finding path.................................................................................................................... done Filling 51568 nlabel 5807 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.028101.label Connecting and filling vertices in path at fillseed 47824 Finding path........................................................................................................................................................................................................................................................................................................................ done Filling 47824 nlabel 8820 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.028201.label Connecting and filling vertices in path at fillseed 49834 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 49834 nlabel 9673 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.028301.label Connecting and filling vertices in path at fillseed 51163 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 51163 nlabel 7864 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.028401.label Connecting and filling vertices in path at fillseed 51584 Finding path........................................................................................................................................... done Filling 51584 nlabel 6082 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.028501.label Connecting and filling vertices in path at fillseed 52147 Finding path........................................................................................................................................................................................................................................................... done Filling 52147 nlabel 7258 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.028601.label Connecting and filling vertices in path at fillseed 52380 Finding path....................................................................................................................................................................................................................................................................................................................................................................... done Filling 52380 nlabel 8094 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.028701.label Connecting and filling vertices in path at fillseed 50425 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 50425 nlabel 6692 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.028801.label Connecting and filling vertices in path at fillseed 115981 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 115981 nlabel 7271 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.028901.label Connecting and filling vertices in path at fillseed 51610 Finding path........................................................................................................................................................ done Filling 51610 nlabel 6250 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.029001.label Connecting and filling vertices in path at fillseed 52997 Finding path............................................................................................................................................................................................................................................................................... done Filling 52997 nlabel 7397 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.029101.label Connecting and filling vertices in path at fillseed 54046 Finding path............................................................................................................................................................................................................................................................................................................................................. done Filling 54046 nlabel 7389 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.029201.label Connecting and filling vertices in path at fillseed 54976 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 54976 nlabel 9890 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.029301.label Connecting and filling vertices in path at fillseed 54004 Finding path................................................................................................................................... done Filling 54004 nlabel 4505 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.029401.label Connecting and filling vertices in path at fillseed 53605 Finding path................................................................................................................................................................................................................................. done Filling 53605 nlabel 6741 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.029501.label Connecting and filling vertices in path at fillseed 54714 Finding path........................................................................................................................................................................... done Filling 54714 nlabel 6953 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.029601.label Connecting and filling vertices in path at fillseed 54847 Finding path............................................................................................................................................................................................................................................................................................................................................................................... done Filling 54847 nlabel 7663 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.029701.label Connecting and filling vertices in path at fillseed 52027 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 52027 nlabel 6690 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.029801.label Connecting and filling vertices in path at fillseed 54601 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 54601 nlabel 7726 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.029901.label Connecting and filling vertices in path at fillseed 55401 Finding path.................................................................................................................................................................................................. done Filling 55401 nlabel 6371 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.030001.label Connecting and filling vertices in path at fillseed 53197 Finding path.......................................................................................................................................................................................................................... done Filling 53197 nlabel 7584 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.030101.label Connecting and filling vertices in path at fillseed 54011 Finding path...................................................................................................................................................................................................................................................... done Filling 54011 nlabel 5134 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.030201.label Connecting and filling vertices in path at fillseed 52027 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 52027 nlabel 6807 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.030301.label Connecting and filling vertices in path at fillseed 53526 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 53526 nlabel 7238 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.030401.label Connecting and filling vertices in path at fillseed 55719 Finding path.......................................................................................................................................... done Filling 55719 nlabel 5469 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.030501.label Connecting and filling vertices in path at fillseed 57086 Finding path...................................................................................................................................................................................................................................................................................................................................... done Filling 57086 nlabel 8386 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.030601.label Connecting and filling vertices in path at fillseed 55046 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 55046 nlabel 10573 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.030701.label Connecting and filling vertices in path at fillseed 56171 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 56171 nlabel 7957 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.030801.label Connecting and filling vertices in path at fillseed 57617 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 57617 nlabel 9012 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.030901.label Connecting and filling vertices in path at fillseed 56268 Finding path.................................................................................................................................................................................................................................................................................. done Filling 56268 nlabel 7712 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.031001.label Connecting and filling vertices in path at fillseed 61331 Finding path....................................................................................................................................................................................................................................................................................................................................................... done Filling 61331 nlabel 8879 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.031101.label Connecting and filling vertices in path at fillseed 56416 Finding path................................................................................................................................................ done Filling 56416 nlabel 4820 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.031201.label Connecting and filling vertices in path at fillseed 56162 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 56162 nlabel 7784 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.031301.label Connecting and filling vertices in path at fillseed 56455 Finding path........................................................................................................................................... done Filling 56455 nlabel 5329 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.031401.label Connecting and filling vertices in path at fillseed 55690 Finding path..................................................................................................................................................................................................................................................... done Filling 55690 nlabel 7282 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.031501.label Connecting and filling vertices in path at fillseed 57168 Finding path............................................................................................................................................................................................................................................................................................................ done Filling 57168 nlabel 8333 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.031601.label Connecting and filling vertices in path at fillseed 59550 Finding path................................................................................................................................................................................................................................................................................................................................................................................... done Filling 59550 nlabel 6940 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.031701.label Connecting and filling vertices in path at fillseed 56174 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 56174 nlabel 8005 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.031801.label Connecting and filling vertices in path at fillseed 58468 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 58468 nlabel 7389 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.031901.label Connecting and filling vertices in path at fillseed 58597 Finding path............................................................................................................................................. done Filling 58597 nlabel 5629 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.032001.label Connecting and filling vertices in path at fillseed 57954 Finding path.............................................................................................................................................................................................................................................................................................................. done Filling 57954 nlabel 8785 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.032101.label Connecting and filling vertices in path at fillseed 56655 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 56655 nlabel 9566 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.032201.label Connecting and filling vertices in path at fillseed 60476 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 60476 nlabel 7101 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.032301.label Connecting and filling vertices in path at fillseed 59390 Finding path................................................................................................................................................................................... done Filling 59390 nlabel 4949 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.032401.label Connecting and filling vertices in path at fillseed 58651 Finding path................................................................................................................................................................................................................. done Filling 58651 nlabel 9093 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.032501.label Connecting and filling vertices in path at fillseed 58821 Finding path............................................................................................................................................................................................................................................................................................................................................................. done Filling 58821 nlabel 5706 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.032601.label Connecting and filling vertices in path at fillseed 60402 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 60402 nlabel 6725 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.032701.label Connecting and filling vertices in path at fillseed 57510 Finding path............................................................................................................................................................................................................................................................................................................................................................................................. done Filling 57510 nlabel 8076 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.032801.label Connecting and filling vertices in path at fillseed 60094 Finding path..................................................................................................................................................................................... done Filling 60094 nlabel 5747 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.032901.label Connecting and filling vertices in path at fillseed 60590 Finding path....................................................................................................................................................................................................... done Filling 60590 nlabel 8005 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.033001.label Connecting and filling vertices in path at fillseed 58906 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 58906 nlabel 10160 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.033101.label Connecting and filling vertices in path at fillseed 62864 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 62864 nlabel 7363 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.033201.label Connecting and filling vertices in path at fillseed 59386 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 59386 nlabel 6974 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.033301.label Connecting and filling vertices in path at fillseed 60910 Finding path............................................................................................................................................... done Filling 60910 nlabel 5895 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.033401.label Connecting and filling vertices in path at fillseed 63300 Finding path..................................................................................................................................................................................................................................................................................................... done Filling 63300 nlabel 8672 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.033501.label Connecting and filling vertices in path at fillseed 61462 Finding path.......................................................................................................................................................... done Filling 61462 nlabel 5076 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.033601.label Connecting and filling vertices in path at fillseed 60004 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 60004 nlabel 9067 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.033701.label Connecting and filling vertices in path at fillseed 59230 Finding path......................................................................................................................................................................................................................................................................................................................................... done Filling 59230 nlabel 9098 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.033801.label Connecting and filling vertices in path at fillseed 62506 Finding path............................................................................................................................................................. done Filling 62506 nlabel 5270 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.033901.label Connecting and filling vertices in path at fillseed 58000 Finding path....................................................................................................................................................................................................................................................................... done Filling 58000 nlabel 5424 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.034001.label Connecting and filling vertices in path at fillseed 62432 Finding path..................................................................................................................................................................................................................................................................... done Filling 62432 nlabel 7076 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.034101.label Connecting and filling vertices in path at fillseed 61180 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 61180 nlabel 6440 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.034201.label Connecting and filling vertices in path at fillseed 60080 Finding path...................................................................................................................................................................................................................................................................................................................... done Filling 60080 nlabel 9203 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.034301.label Connecting and filling vertices in path at fillseed 62892 Finding path................................................................................................................ done Filling 62892 nlabel 4671 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.034401.label Connecting and filling vertices in path at fillseed 61227 Finding path................................................................................................................................................................................................. done Filling 61227 nlabel 8261 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.034501.label Connecting and filling vertices in path at fillseed 62979 Finding path................................................................................................................................................................................................................................................................................................ done Filling 62979 nlabel 8747 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.034601.label Connecting and filling vertices in path at fillseed 64956 Finding path......................................................................................................................................................................................................................................................................... done Filling 64956 nlabel 8598 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.034701.label Connecting and filling vertices in path at fillseed 60611 Finding path........................................................................................................................................................................................................... done Filling 60611 nlabel 8378 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.034801.label Connecting and filling vertices in path at fillseed 61180 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 61180 nlabel 6777 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.034901.label Connecting and filling vertices in path at fillseed 64142 Finding path...................................................................................................................................................................................................................................................................................................................................... done Filling 64142 nlabel 6288 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.035001.label Connecting and filling vertices in path at fillseed 63715 Finding path.................................................................................................................................................... done Filling 63715 nlabel 5490 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.035101.label Connecting and filling vertices in path at fillseed 65035 Finding path................................................................................................................................................................................................................ done Filling 65035 nlabel 7715 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.035201.label Connecting and filling vertices in path at fillseed 117362 Finding path....................................................................................................................................................................................................................................................................................................... done Filling 117362 nlabel 7182 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.035301.label Connecting and filling vertices in path at fillseed 62067 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 62067 nlabel 7048 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.035401.label Connecting and filling vertices in path at fillseed 65119 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 65119 nlabel 4425 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.035501.label Connecting and filling vertices in path at fillseed 63942 Finding path.......................................................................................................................................................................................................................................................... done Filling 63942 nlabel 8245 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.035601.label Connecting and filling vertices in path at fillseed 65304 Finding path........................................................................................................................................................................................................................... done Filling 65304 nlabel 8379 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.035701.label Connecting and filling vertices in path at fillseed 62515 Finding path...................................................................................................................................................................................................................................................................................................................................................................................... done Filling 62515 nlabel 9809 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.035801.label Connecting and filling vertices in path at fillseed 68017 Finding path............................................................................................................................................................................................................................................................................................................................................................................................... done Filling 68017 nlabel 6825 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.035901.label Connecting and filling vertices in path at fillseed 65054 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 65054 nlabel 7162 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.036001.label Connecting and filling vertices in path at fillseed 64676 Finding path................................................................................................................................................................................... done Filling 64676 nlabel 5549 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.036101.label Connecting and filling vertices in path at fillseed 65097 Finding path............................................................................................................................................................................................................................................................ done Filling 65097 nlabel 7605 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.036201.label Connecting and filling vertices in path at fillseed 64372 Finding path................................................................................................................................................................................................................................................. done Filling 64372 nlabel 8617 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.036301.label Connecting and filling vertices in path at fillseed 66967 Finding path................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 66967 nlabel 6814 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.036401.label Connecting and filling vertices in path at fillseed 62826 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 62826 nlabel 10258 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.036501.label Connecting and filling vertices in path at fillseed 65675 Finding path............................................................................................................................................................................ done Filling 65675 nlabel 4979 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.036601.label Connecting and filling vertices in path at fillseed 67076 Finding path.......................................................................................................................................................................................................................................................................... done Filling 67076 nlabel 7265 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.036701.label Connecting and filling vertices in path at fillseed 70490 Finding path........................................................................................................................................................................................................................................................... done Filling 70490 nlabel 6298 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.036801.label Connecting and filling vertices in path at fillseed 63940 Finding path............................................................................................................................................................................................................................................................................................................................................................................ done Filling 63940 nlabel 6924 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.036901.label Connecting and filling vertices in path at fillseed 117344 Finding path............................................................... done Filling 117344 nlabel 4480 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.037001.label Connecting and filling vertices in path at fillseed 66775 Finding path.......................................................................................................................................................... done Filling 66775 nlabel 4593 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.037101.label Connecting and filling vertices in path at fillseed 68178 Finding path............................................................................................................................................................................................................................................................ done Filling 68178 nlabel 7582 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.037201.label Connecting and filling vertices in path at fillseed 70501 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 70501 nlabel 5809 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.037301.label Connecting and filling vertices in path at fillseed 65272 Finding path.................................................................................. done Filling 65272 nlabel 4351 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.037401.label Connecting and filling vertices in path at fillseed 67834 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 67834 nlabel 9557 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.037501.label Connecting and filling vertices in path at fillseed 67949 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 67949 nlabel 7089 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.037601.label Connecting and filling vertices in path at fillseed 68142 Finding path......................................................................................................................................................................................................... done Filling 68142 nlabel 7666 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.037701.label Connecting and filling vertices in path at fillseed 71393 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 71393 nlabel 5824 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.037801.label Connecting and filling vertices in path at fillseed 65272 Finding path.............................................................................................. done Filling 65272 nlabel 4463 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.037901.label Connecting and filling vertices in path at fillseed 67717 Finding path.................................................................................................................................................................................................................................................................................................... done Filling 67717 nlabel 9072 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.038001.label Connecting and filling vertices in path at fillseed 68770 Finding path......................................................................................................................................................... done Filling 68770 nlabel 5008 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.038101.label Connecting and filling vertices in path at fillseed 69276 Finding path................................................................................................................................................................................................................................................................................................ done Filling 69276 nlabel 7846 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.038201.label Connecting and filling vertices in path at fillseed 71402 Finding path......................................................................................................................................................................................................................................................................................................................... done Filling 71402 nlabel 5397 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.038301.label Connecting and filling vertices in path at fillseed 68018 Finding path.............................................................................................................................................................................................................................................................................................. done Filling 68018 nlabel 7816 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.038401.label Connecting and filling vertices in path at fillseed 68978 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 68978 nlabel 7470 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.038501.label Connecting and filling vertices in path at fillseed 70544 Finding path........................................................................................................... done Filling 70544 nlabel 5052 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.038601.label Connecting and filling vertices in path at fillseed 70276 Finding path................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 70276 nlabel 8096 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.038701.label Connecting and filling vertices in path at fillseed 68425 Finding path......................................................................................................................................................................................................................................................... done Filling 68425 nlabel 9385 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.038801.label Connecting and filling vertices in path at fillseed 69123 Finding path................................................................................................................................................................................................................................................................................................................................................................................. done Filling 69123 nlabel 7987 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.038901.label Connecting and filling vertices in path at fillseed 69853 Finding path................................................................................................................................................................................................................................................................................................................... done Filling 69853 nlabel 9113 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.039001.label Connecting and filling vertices in path at fillseed 70826 Finding path.................................................................................................................................................................... done Filling 70826 nlabel 4653 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.039101.label Connecting and filling vertices in path at fillseed 70507 Finding path................................................................................................................................................................................................................ done Filling 70507 nlabel 7041 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.039201.label Connecting and filling vertices in path at fillseed 67458 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 67458 nlabel 12146 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.039301.label Connecting and filling vertices in path at fillseed 68018 Finding path................................................................................................................................................................................................................................................................................................................................................................................. done Filling 68018 nlabel 8060 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.039401.label Connecting and filling vertices in path at fillseed 72823 Finding path................................................................................................................................................ done Filling 72823 nlabel 4389 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.039501.label Connecting and filling vertices in path at fillseed 72045 Finding path........................................................................................................................................................................................................................................................................................................................................................ done Filling 72045 nlabel 7723 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.039601.label Connecting and filling vertices in path at fillseed 71433 Finding path...................................................................................................................................................................................................................................................... done Filling 71433 nlabel 6934 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.039701.label Connecting and filling vertices in path at fillseed 74116 Finding path........................................................................ done Filling 74116 nlabel 4841 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.039801.label Connecting and filling vertices in path at fillseed 66255 Finding path.......................................................................... done Filling 66255 nlabel 4903 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.039901.label Connecting and filling vertices in path at fillseed 70924 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 70924 nlabel 9534 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.040001.label Connecting and filling vertices in path at fillseed 72322 Finding path.......................................................................................................................................................................... done Filling 72322 nlabel 4861 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.040101.label Connecting and filling vertices in path at fillseed 74978 Finding path........................................................................................................................................................................................................................................................................................................................................... done Filling 74978 nlabel 5379 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.040201.label Connecting and filling vertices in path at fillseed 68644 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 68644 nlabel 11075 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.040301.label Connecting and filling vertices in path at fillseed 73021 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 73021 nlabel 8499 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.040401.label Connecting and filling vertices in path at fillseed 74600 Finding path.............................................................................................................................................. done Filling 74600 nlabel 4314 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.040501.label Connecting and filling vertices in path at fillseed 74701 Finding path......................................................................................................................................................................................................................................................................................................................................................................... done Filling 74701 nlabel 6199 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.040601.label Connecting and filling vertices in path at fillseed 73249 Finding path.................................................................................................................................................................................................................................................... done Filling 73249 nlabel 7773 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.040701.label Connecting and filling vertices in path at fillseed 76068 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 76068 nlabel 10759 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.040801.label Connecting and filling vertices in path at fillseed 70950 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 70950 nlabel 11319 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.040901.label Connecting and filling vertices in path at fillseed 75165 Finding path........................................................................................................................................................ done Filling 75165 nlabel 6259 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.041001.label Connecting and filling vertices in path at fillseed 74737 Finding path............................................................................................................................................................................................................................................................................................. done Filling 74737 nlabel 6665 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.041101.label Connecting and filling vertices in path at fillseed 76688 Finding path.................................................................................................................................................................................................................................................................................................................................................................. done Filling 76688 nlabel 5449 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.041201.label Connecting and filling vertices in path at fillseed 76048 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 76048 nlabel 10423 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.041301.label Connecting and filling vertices in path at fillseed 77170 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 77170 nlabel 12234 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.041401.label Connecting and filling vertices in path at fillseed 71824 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 71824 nlabel 7976 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.041501.label Connecting and filling vertices in path at fillseed 76388 Finding path....................................................................................................................................................................................................................................................................................................... done Filling 76388 nlabel 6813 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.041601.label Connecting and filling vertices in path at fillseed 72358 Finding path........................................................................................................................................................................................................ done Filling 72358 nlabel 7036 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.041701.label Connecting and filling vertices in path at fillseed 77558 Finding path........................................................................ done Filling 77558 nlabel 4686 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.041801.label Connecting and filling vertices in path at fillseed 71315 Finding path...................................................................... done Filling 71315 nlabel 4532 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.041901.label Connecting and filling vertices in path at fillseed 74831 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 74831 nlabel 5259 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.042001.label Connecting and filling vertices in path at fillseed 77250 Finding path................................................................................................................................................................................................................................................................................... done Filling 77250 nlabel 6852 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.042101.label Connecting and filling vertices in path at fillseed 76635 Finding path...................................................................................................................................................................................................................................................................................................... done Filling 76635 nlabel 5471 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.042201.label Connecting and filling vertices in path at fillseed 75971 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 75971 nlabel 10470 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.042301.label Connecting and filling vertices in path at fillseed 72659 Finding path....................................................................................................................................................................................................................................................................................................................................................................................... done Filling 72659 nlabel 8024 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.042401.label Connecting and filling vertices in path at fillseed 117664 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 117664 nlabel 7058 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.042501.label Connecting and filling vertices in path at fillseed 79121 Finding path................................................................................................................................................................................................................................................................................................................................... done Filling 79121 nlabel 6619 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.042601.label Connecting and filling vertices in path at fillseed 76649 Finding path......................................................................................................................................................................................................................................................................................................................... done Filling 76649 nlabel 5472 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.042701.label Connecting and filling vertices in path at fillseed 78457 Finding path...................................................................................... done Filling 78457 nlabel 4661 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.042801.label Connecting and filling vertices in path at fillseed 73135 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 73135 nlabel 6459 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.042901.label Connecting and filling vertices in path at fillseed 78792 Finding path..................................................................................................................................... done Filling 78792 nlabel 5204 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.043001.label Connecting and filling vertices in path at fillseed 117676 Finding path............................................................................................................................................................................................................................................................................. done Filling 117676 nlabel 6292 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.043101.label Connecting and filling vertices in path at fillseed 80407 Finding path..................................................................................... done Filling 80407 nlabel 4611 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.043201.label Connecting and filling vertices in path at fillseed 77310 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 77310 nlabel 9513 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.043301.label Connecting and filling vertices in path at fillseed 79620 Finding path.............................................................................................................................................................. done Filling 79620 nlabel 5429 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.043401.label Connecting and filling vertices in path at fillseed 79123 Finding path.......................................................................................................................................................................................................................................................................................................... done Filling 79123 nlabel 6832 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.043501.label Connecting and filling vertices in path at fillseed 81333 Finding path......................................................................................................... done Filling 81333 nlabel 3613 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.043601.label Connecting and filling vertices in path at fillseed 78377 Finding path............................................................................................................................................................................................................................................................................................................... done Filling 78377 nlabel 4452 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.043701.label Connecting and filling vertices in path at fillseed 78015 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 78015 nlabel 10745 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.043801.label Connecting and filling vertices in path at fillseed 82304 Finding path........................................................................................................................... done Filling 82304 nlabel 5504 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.043901.label Connecting and filling vertices in path at fillseed 78319 Finding path................................................................................................................................................................................................................................................................................................................. done Filling 78319 nlabel 5996 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.044001.label Connecting and filling vertices in path at fillseed 78556 Finding path.................................................................................................................................................................................................................................................................. done Filling 78556 nlabel 7993 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.044101.label Connecting and filling vertices in path at fillseed 78983 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 78983 nlabel 8270 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.044201.label Connecting and filling vertices in path at fillseed 81831 Finding path.............................................................................................................. done Filling 81831 nlabel 3856 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.044301.label Connecting and filling vertices in path at fillseed 81036 Finding path................................................................................................................................................................................................................................................................................................................................................... done Filling 81036 nlabel 7051 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.044401.label Connecting and filling vertices in path at fillseed 79421 Finding path................................................................................................................................................................................................................... done Filling 79421 nlabel 6755 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.044501.label Connecting and filling vertices in path at fillseed 80351 Finding path.................................................................................................................................................................................................................................................................................... done Filling 80351 nlabel 4438 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.044601.label Connecting and filling vertices in path at fillseed 78222 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 78222 nlabel 9511 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.044701.label Connecting and filling vertices in path at fillseed 80585 Finding path............................................................................................................................ done Filling 80585 nlabel 5645 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.044801.label Connecting and filling vertices in path at fillseed 84507 Finding path........................................................................................................................................................................................................................................................................................................ done Filling 84507 nlabel 7011 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.044901.label Connecting and filling vertices in path at fillseed 79501 Finding path..................................................................................................................................................................................................................................................................................................... done Filling 79501 nlabel 8322 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.045001.label Connecting and filling vertices in path at fillseed 78982 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 78982 nlabel 7997 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.045101.label Connecting and filling vertices in path at fillseed 83454 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 83454 nlabel 10906 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.045201.label Connecting and filling vertices in path at fillseed 81888 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 81888 nlabel 5867 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.045301.label Connecting and filling vertices in path at fillseed 78320 Finding path.................................................................................................................................................................................................................................................................................................................. done Filling 78320 nlabel 6110 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.045401.label Connecting and filling vertices in path at fillseed 83025 Finding path........................................................................................................... done Filling 83025 nlabel 3699 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.045501.label Connecting and filling vertices in path at fillseed 83781 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 83781 nlabel 4599 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.045601.label Connecting and filling vertices in path at fillseed 83446 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 83446 nlabel 8249 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.045701.label Connecting and filling vertices in path at fillseed 83573 Finding path.................................................................................................................................................................................................................................................................................................................................................................................. done Filling 83573 nlabel 5619 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.045801.label Connecting and filling vertices in path at fillseed 82276 Finding path........................................................................................................................................................................................................................................................................ done Filling 82276 nlabel 7241 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.045901.label Connecting and filling vertices in path at fillseed 82266 Finding path..................................................................................................................................................................................................................................................... done Filling 82266 nlabel 7298 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.046001.label Connecting and filling vertices in path at fillseed 80562 Finding path................................................................................................................................................................................................................................................................................................................ done Filling 80562 nlabel 11067 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.046101.label Connecting and filling vertices in path at fillseed 84113 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................... done Filling 84113 nlabel 8818 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.046201.label Connecting and filling vertices in path at fillseed 82907 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 82907 nlabel 7491 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.046301.label Connecting and filling vertices in path at fillseed 85227 Finding path................................................................................................................................................................................................................................................................................................................................................ done Filling 85227 nlabel 5052 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.046401.label Connecting and filling vertices in path at fillseed 85411 Finding path............................................................................................................................................................................................................................................................................................................................ done Filling 85411 nlabel 6462 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.046501.label Connecting and filling vertices in path at fillseed 84746 Finding path................................................................................................................................................................................................................................................................... done Filling 84746 nlabel 8228 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.046601.label Connecting and filling vertices in path at fillseed 82834 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 82834 nlabel 8274 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.046701.label Connecting and filling vertices in path at fillseed 84594 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 84594 nlabel 5388 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.046801.label Connecting and filling vertices in path at fillseed 85062 Finding path........................................................................................................................................................................................................................................................................ done Filling 85062 nlabel 8134 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.046901.label Connecting and filling vertices in path at fillseed 86927 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 86927 nlabel 6361 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.047001.label Connecting and filling vertices in path at fillseed 85549 Finding path............................................................................................................................................................................................................................ done Filling 85549 nlabel 8141 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.047101.label Connecting and filling vertices in path at fillseed 117719 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 117719 nlabel 8029 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.047201.label Connecting and filling vertices in path at fillseed 84154 Finding path................................................................................................................................................................................................................................................................................................. done Filling 84154 nlabel 8737 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.047301.label Connecting and filling vertices in path at fillseed 84703 Finding path........................................................................................................................................... done Filling 84703 nlabel 5364 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.047401.label Connecting and filling vertices in path at fillseed 85446 Finding path................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 85446 nlabel 4751 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.047501.label Connecting and filling vertices in path at fillseed 87073 Finding path................................................................................................................................................................................................................................................................................................................ done Filling 87073 nlabel 3596 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.047601.label Connecting and filling vertices in path at fillseed 84543 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 84543 nlabel 7528 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.047701.label Connecting and filling vertices in path at fillseed 87228 Finding path.......................................................................................................................................... done Filling 87228 nlabel 6027 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.047801.label Connecting and filling vertices in path at fillseed 89895 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 89895 nlabel 6734 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.047901.label Connecting and filling vertices in path at fillseed 86380 Finding path................................................................................................................................................................................................................................................................................................... done Filling 86380 nlabel 8739 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.048001.label Connecting and filling vertices in path at fillseed 83736 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 83736 nlabel 7138 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.048101.label Connecting and filling vertices in path at fillseed 87504 Finding path...................................................................................................................................................................... done Filling 87504 nlabel 4619 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.048201.label Connecting and filling vertices in path at fillseed 89890 Finding path................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 89890 nlabel 6965 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.048301.label Connecting and filling vertices in path at fillseed 86351 Finding path..................................................................................................................................................................................................................... done Filling 86351 nlabel 8769 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.048401.label Connecting and filling vertices in path at fillseed 86036 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 86036 nlabel 7762 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.048501.label Connecting and filling vertices in path at fillseed 88294 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 88294 nlabel 11282 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.048601.label Connecting and filling vertices in path at fillseed 89160 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 89160 nlabel 5501 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.048701.label Connecting and filling vertices in path at fillseed 88609 Finding path....................................................................................................................................................................................................................................................................... done Filling 88609 nlabel 8191 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.048801.label Connecting and filling vertices in path at fillseed 87094 Finding path................................................................................................................................................................................................................................................................................................... done Filling 87094 nlabel 3032 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.048901.label Connecting and filling vertices in path at fillseed 86036 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 86036 nlabel 7722 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.049001.label Connecting and filling vertices in path at fillseed 88083 Finding path............................................................................................................................................................................................................................................ done Filling 88083 nlabel 8560 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.049101.label Connecting and filling vertices in path at fillseed 89998 Finding path........................................................................................................................................................... done Filling 89998 nlabel 5557 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.049201.label Connecting and filling vertices in path at fillseed 88597 Finding path..................................................................................................................................................................................................................................................... done Filling 88597 nlabel 7786 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.049301.label Connecting and filling vertices in path at fillseed 117765 Finding path...................................................................................................................................................................................................................................................................................................................... done Filling 117765 nlabel 2966 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.049401.label Connecting and filling vertices in path at fillseed 91814 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 91814 nlabel 8369 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.049501.label Connecting and filling vertices in path at fillseed 85376 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 85376 nlabel 7299 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.049601.label Connecting and filling vertices in path at fillseed 89658 Finding path.................................................................................................................................................................................. done Filling 89658 nlabel 9008 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.049701.label Connecting and filling vertices in path at fillseed 91190 Finding path............................................................................................................................................................................................................................................................................................................................................................................................... done Filling 91190 nlabel 5741 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.049801.label Connecting and filling vertices in path at fillseed 86162 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 86162 nlabel 5910 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.049901.label Connecting and filling vertices in path at fillseed 86252 Finding path......................................................................................................................................................................................................................................................................... done Filling 86252 nlabel 2436 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.050001.label Connecting and filling vertices in path at fillseed 87845 Finding path................................................................................................................................................................................................................................................................................................................................... done Filling 87845 nlabel 3115 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.050101.label Connecting and filling vertices in path at fillseed 87573 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 87573 nlabel 10933 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.050201.label Connecting and filling vertices in path at fillseed 91049 Finding path................................................................................................................................................................................................................. done Filling 91049 nlabel 4995 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.050301.label Connecting and filling vertices in path at fillseed 91957 Finding path........................................................................................................................................................................................................................................................................................................................................................................................ done Filling 91957 nlabel 6150 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.050401.label Connecting and filling vertices in path at fillseed 88628 Finding path............................................................................................................................................................................................................................................................ done Filling 88628 nlabel 7679 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.050501.label Connecting and filling vertices in path at fillseed 86141 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 86141 nlabel 8150 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.050601.label Connecting and filling vertices in path at fillseed 88835 Finding path....................................................................................................................................................................................................................................................................................................................... done Filling 88835 nlabel 8797 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.050701.label Connecting and filling vertices in path at fillseed 91123 Finding path....................................................................................................................................................................................... done Filling 91123 nlabel 5527 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.050801.label Connecting and filling vertices in path at fillseed 91988 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 91988 nlabel 6448 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.050901.label Connecting and filling vertices in path at fillseed 89373 Finding path...................................................................................................................................................................................................................... done Filling 89373 nlabel 8484 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.051001.label Connecting and filling vertices in path at fillseed 88549 Finding path............................................................................................................................................................................................................................................................................................................. done Filling 88549 nlabel 2810 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.051101.label Connecting and filling vertices in path at fillseed 90890 Finding path........................................................................................................................................................................................ done Filling 90890 nlabel 8567 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.051201.label Connecting and filling vertices in path at fillseed 92011 Finding path............................................................................................................................................................................................................................... done Filling 92011 nlabel 5091 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.051301.label Connecting and filling vertices in path at fillseed 86961 Finding path....................................................................................................................................................................................................................................................................................................................................................................... done Filling 86961 nlabel 5925 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.051401.label Connecting and filling vertices in path at fillseed 88574 Finding path.................................................................................................................................................................................................................................................................................. done Filling 88574 nlabel 2584 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.051501.label Connecting and filling vertices in path at fillseed 88524 Finding path.......................................................................................................................................................................................................................................................... done Filling 88524 nlabel 3189 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.051601.label Connecting and filling vertices in path at fillseed 90728 Finding path.............................................................................................................................................. done Filling 90728 nlabel 5743 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.051701.label Connecting and filling vertices in path at fillseed 91977 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 91977 nlabel 6779 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.051801.label Connecting and filling vertices in path at fillseed 88554 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 88554 nlabel 2155 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.051901.label Connecting and filling vertices in path at fillseed 92960 Finding path.......................................................................................................................................................................................................................................................... done Filling 92960 nlabel 10858 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.052001.label Connecting and filling vertices in path at fillseed 91638 Finding path................................................................................................................................................................................................. done Filling 91638 nlabel 8128 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.052101.label Connecting and filling vertices in path at fillseed 92196 Finding path.............................................................................................................................................. done Filling 92196 nlabel 5822 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.052201.label Connecting and filling vertices in path at fillseed 93632 Finding path............................................................................................................................................................................................... done Filling 93632 nlabel 8263 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.052301.label Connecting and filling vertices in path at fillseed 89933 Finding path.................................................................................................................................................................................................................................................................................................................. done Filling 89933 nlabel 2712 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.052401.label Connecting and filling vertices in path at fillseed 95678 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 95678 nlabel 9012 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.052501.label Connecting and filling vertices in path at fillseed 94104 Finding path.............................................................................................................................................................................. done Filling 94104 nlabel 5847 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.052601.label Connecting and filling vertices in path at fillseed 117804 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 117804 nlabel 6145 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.052701.label Connecting and filling vertices in path at fillseed 94297 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 94297 nlabel 8329 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.052801.label Connecting and filling vertices in path at fillseed 89264 Finding path.................................................................................................................................................................................................................................................... done Filling 89264 nlabel 2615 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.052901.label Connecting and filling vertices in path at fillseed 94282 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 94282 nlabel 7361 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.053001.label Connecting and filling vertices in path at fillseed 89933 Finding path.......................................................................................................................................................................................................................................................................................................... done Filling 89933 nlabel 2553 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.053101.label Connecting and filling vertices in path at fillseed 93100 Finding path....................................................................................................................................................................................................................................................................................... done Filling 93100 nlabel 9511 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.053201.label Connecting and filling vertices in path at fillseed 94764 Finding path......................................................................................................... done Filling 94764 nlabel 5983 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.053301.label Connecting and filling vertices in path at fillseed 95090 Finding path................................................................................................................................................................................................................................................................................................................................................. done Filling 95090 nlabel 6655 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.053401.label Connecting and filling vertices in path at fillseed 94478 Finding path...................................................................................................................................................................................... done Filling 94478 nlabel 7707 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.053501.label Connecting and filling vertices in path at fillseed 90579 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 90579 nlabel 4058 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.053601.label Connecting and filling vertices in path at fillseed 93231 Finding path........................................................................................................................................................................................................................................................................................................................................ done Filling 93231 nlabel 9862 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.053701.label Connecting and filling vertices in path at fillseed 97504 Finding path............................................................................................................................................ done Filling 97504 nlabel 5488 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.053801.label Connecting and filling vertices in path at fillseed 95858 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 95858 nlabel 7985 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.053901.label Connecting and filling vertices in path at fillseed 93857 Finding path.............................................................................................................................................................................................................................................................. done Filling 93857 nlabel 9717 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.054001.label Connecting and filling vertices in path at fillseed 97616 Finding path.............................................................................................................................................. done Filling 97616 nlabel 5850 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.054101.label Connecting and filling vertices in path at fillseed 96694 Finding path......................................................................................................................................................................................................................................................................................................................... done Filling 96694 nlabel 6620 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.054201.label Connecting and filling vertices in path at fillseed 96590 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 96590 nlabel 8072 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.054301.label Connecting and filling vertices in path at fillseed 97927 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 97927 nlabel 7828 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.054401.label Connecting and filling vertices in path at fillseed 98270 Finding path.............................................................................................................................. done Filling 98270 nlabel 5651 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.054501.label Connecting and filling vertices in path at fillseed 96661 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 96661 nlabel 6498 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.054601.label Connecting and filling vertices in path at fillseed 97284 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 97284 nlabel 8269 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.054701.label Connecting and filling vertices in path at fillseed 97032 Finding path.................................................................................................................................... done Filling 97032 nlabel 6217 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.054801.label Connecting and filling vertices in path at fillseed 98162 Finding path................................................................................................................................................................................................................................. done Filling 98162 nlabel 5336 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.054901.label Connecting and filling vertices in path at fillseed 96654 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 96654 nlabel 8322 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.055001.label Connecting and filling vertices in path at fillseed 95324 Finding path................................................................................................................................................................................................................................................................... done Filling 95324 nlabel 8744 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.055101.label Connecting and filling vertices in path at fillseed 99323 Finding path.................................................................................................................................................................................................. done Filling 99323 nlabel 5947 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.055201.label Connecting and filling vertices in path at fillseed 98153 Finding path.......................................................................................................................................................................................................................................... done Filling 98153 nlabel 6022 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.055301.label Connecting and filling vertices in path at fillseed 97361 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 97361 nlabel 7613 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.055401.label Connecting and filling vertices in path at fillseed 97069 Finding path....................................................................................................................................................................................................................................................................... done Filling 97069 nlabel 8120 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.055501.label Connecting and filling vertices in path at fillseed 98930 Finding path............................................................................................................................................................................ done Filling 98930 nlabel 5216 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.055601.label Connecting and filling vertices in path at fillseed 97356 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 97356 nlabel 8021 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.055701.label Connecting and filling vertices in path at fillseed 99123 Finding path.......................................................................................................................................................................................................................................................... done Filling 99123 nlabel 8269 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.055801.label Connecting and filling vertices in path at fillseed 100998 Finding path............................................................................................................................................................................................................................................................................................................................................................................ done Filling 100998 nlabel 5170 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.055901.label Connecting and filling vertices in path at fillseed 98902 Finding path.................................................................................................................................................................................................... done Filling 98902 nlabel 6987 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.056001.label Connecting and filling vertices in path at fillseed 98064 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 98064 nlabel 7946 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.056101.label Connecting and filling vertices in path at fillseed 100783 Finding path................................................................................................................................................ done Filling 100783 nlabel 6407 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.056201.label Connecting and filling vertices in path at fillseed 99628 Finding path................................................................................................................................................................................................................................................. done Filling 99628 nlabel 4523 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.056301.label Connecting and filling vertices in path at fillseed 98207 Finding path..................................................................................................................................................................................................................... done Filling 98207 nlabel 7563 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.056401.label Connecting and filling vertices in path at fillseed 101484 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 101484 nlabel 7441 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.056501.label Connecting and filling vertices in path at fillseed 102471 Finding path...................................................................................................................................... done Filling 102471 nlabel 5825 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.056601.label Connecting and filling vertices in path at fillseed 101647 Finding path.................................................................................................................................................................................................................................................................................................................................. done Filling 101647 nlabel 6180 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.056701.label Connecting and filling vertices in path at fillseed 101739 Finding path........................................................................................................................................................................................................................................................................ done Filling 101739 nlabel 8283 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.056801.label Connecting and filling vertices in path at fillseed 103258 Finding path............................................................................................................................................................................... done Filling 103258 nlabel 6315 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.056901.label Connecting and filling vertices in path at fillseed 100323 Finding path............................................................................................................................................................................................................................................................................................................................. done Filling 100323 nlabel 6462 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.057001.label Connecting and filling vertices in path at fillseed 102299 Finding path................................................................................................................................................................................................ done Filling 102299 nlabel 7619 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.057101.label Connecting and filling vertices in path at fillseed 101287 Finding path....................................................................................................................................................................................................................................................................................... done Filling 101287 nlabel 6690 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.057201.label Connecting and filling vertices in path at fillseed 103513 Finding path.................................................................................................................................. done Filling 103513 nlabel 5225 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.057301.label Connecting and filling vertices in path at fillseed 102299 Finding path............................................................................................................................................................................ done Filling 102299 nlabel 7125 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.057401.label Connecting and filling vertices in path at fillseed 100585 Finding path............................................................................................................................................................................................................................ done Filling 100585 nlabel 7554 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.057501.label Connecting and filling vertices in path at fillseed 102009 Finding path................................................................................................................................................... done Filling 102009 nlabel 6727 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.057601.label Connecting and filling vertices in path at fillseed 102871 Finding path............................................................................................................................................................................................................ done Filling 102871 nlabel 7030 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.057701.label Connecting and filling vertices in path at fillseed 103483 Finding path................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 103483 nlabel 7781 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.057801.label Connecting and filling vertices in path at fillseed 104927 Finding path.................................................................................................................................. done Filling 104927 nlabel 5825 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.057901.label Connecting and filling vertices in path at fillseed 103569 Finding path............................................................................................................................................................................................................................................... done Filling 103569 nlabel 6336 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.058001.label Connecting and filling vertices in path at fillseed 104178 Finding path........................................................................................................................................................................................................................................................................................................................................................................................ done Filling 104178 nlabel 8135 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.058101.label Connecting and filling vertices in path at fillseed 104952 Finding path...................................................................................................................... done Filling 104952 nlabel 4758 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.058201.label Connecting and filling vertices in path at fillseed 104969 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 104969 nlabel 7005 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.058301.label Connecting and filling vertices in path at fillseed 104160 Finding path.............................................................................................................................................................................................................................................................................................................................................................................. done Filling 104160 nlabel 7927 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.058401.label Connecting and filling vertices in path at fillseed 104644 Finding path....................................................................................................................................................... done Filling 104644 nlabel 6288 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.058501.label Connecting and filling vertices in path at fillseed 105640 Finding path.............................................................................................................................................................. done Filling 105640 nlabel 5269 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.058601.label Connecting and filling vertices in path at fillseed 105528 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 105528 nlabel 5612 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.058701.label Connecting and filling vertices in path at fillseed 105370 Finding path..................................................................................................................................................................................................................................................................................... done Filling 105370 nlabel 5729 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.058801.label Connecting and filling vertices in path at fillseed 105632 Finding path................................................................................................................................................ done Filling 105632 nlabel 5114 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.058901.label Connecting and filling vertices in path at fillseed 104305 Finding path.......................................................................................................................................................................... done Filling 104305 nlabel 7358 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.059001.label Connecting and filling vertices in path at fillseed 105553 Finding path............................................................................................................................................................................................................................................................................................................. done Filling 105553 nlabel 7587 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.059101.label Connecting and filling vertices in path at fillseed 104462 Finding path.......................................................................................................................................... done Filling 104462 nlabel 6508 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.059201.label Connecting and filling vertices in path at fillseed 105659 Finding path............................................................................................................................................................................................................................... done Filling 105659 nlabel 7353 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.059301.label Connecting and filling vertices in path at fillseed 104855 Finding path......................................................................................................................................................................................................................................................................................................... done Filling 104855 nlabel 7111 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.059401.label Connecting and filling vertices in path at fillseed 105357 Finding path..................................................................................................................................... done Filling 105357 nlabel 6701 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.059501.label Connecting and filling vertices in path at fillseed 106905 Finding path............................................................................................................................................................. done Filling 106905 nlabel 6379 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.059601.label Connecting and filling vertices in path at fillseed 108672 Finding path........................................................................................................................................................ done Filling 108672 nlabel 7067 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.059701.label Connecting and filling vertices in path at fillseed 105387 Finding path................................................................................................................................................................................................... done Filling 105387 nlabel 4928 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.059801.label Connecting and filling vertices in path at fillseed 107492 Finding path....................................................................................................................................................................... done Filling 107492 nlabel 5938 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.059901.label Connecting and filling vertices in path at fillseed 106310 Finding path................................................................................................................................................................................... done Filling 106310 nlabel 7368 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.060001.label Connecting and filling vertices in path at fillseed 106797 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 106797 nlabel 6476 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.060101.label Connecting and filling vertices in path at fillseed 108709 Finding path.......................................................................................................................................................................... done Filling 108709 nlabel 6499 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.060201.label Connecting and filling vertices in path at fillseed 106919 Finding path........................................................................................................................................................................................... done Filling 106919 nlabel 6829 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.060301.label Connecting and filling vertices in path at fillseed 106482 Finding path...................................................................................................................................................................................................................................... done Filling 106482 nlabel 7890 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.060401.label Connecting and filling vertices in path at fillseed 109218 Finding path.................................................................................................................................................... done Filling 109218 nlabel 4693 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.060501.label Connecting and filling vertices in path at fillseed 109206 Finding path................................................................................................................................................................................................... done Filling 109206 nlabel 6733 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.060601.label Connecting and filling vertices in path at fillseed 107581 Finding path............................................................................................................................................................................................................................... done Filling 107581 nlabel 8129 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.060701.label Connecting and filling vertices in path at fillseed 107811 Finding path..................................................................................................................................................................................................................... done Filling 107811 nlabel 5425 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.060801.label Connecting and filling vertices in path at fillseed 108617 Finding path........................................................................................................................................................................................ done Filling 108617 nlabel 5192 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.060901.label Connecting and filling vertices in path at fillseed 108109 Finding path................................................................................................................................................................................................................................. done Filling 108109 nlabel 7897 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.061001.label Connecting and filling vertices in path at fillseed 110810 Finding path.............................................................................................................................................................. done Filling 110810 nlabel 6451 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.061101.label Connecting and filling vertices in path at fillseed 109834 Finding path......................................................................................................................................................................................... done Filling 109834 nlabel 6964 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.061201.label Connecting and filling vertices in path at fillseed 109128 Finding path.................................................................................................................................................................... done Filling 109128 nlabel 6408 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.061301.label Connecting and filling vertices in path at fillseed 110961 Finding path................................................................................................................................................................................ done Filling 110961 nlabel 6171 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.061401.label Connecting and filling vertices in path at fillseed 111016 Finding path................................................................................................................................................................ done Filling 111016 nlabel 6415 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.061501.label Connecting and filling vertices in path at fillseed 109439 Finding path......................................................................................................................................................................................................................... done Filling 109439 nlabel 7186 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.061601.label Connecting and filling vertices in path at fillseed 110974 Finding path.............................................................................................................................................................. done Filling 110974 nlabel 5601 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.061701.label Connecting and filling vertices in path at fillseed 110998 Finding path................................................................................................................................................................................. done Filling 110998 nlabel 7184 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.061801.label Connecting and filling vertices in path at fillseed 109439 Finding path............................................................................................................................................................................................ done Filling 109439 nlabel 7522 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.061901.label Connecting and filling vertices in path at fillseed 112361 Finding path........................................................................................................................................................................... done Filling 112361 nlabel 5715 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.062001.label Connecting and filling vertices in path at fillseed 111053 Finding path................................................................................................................................................................................................... done Filling 111053 nlabel 6382 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.062101.label Connecting and filling vertices in path at fillseed 110073 Finding path..................................................................................................................................................................................................... done Filling 110073 nlabel 7344 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.062201.label Connecting and filling vertices in path at fillseed 113240 Finding path................................................................................................................................... done Filling 113240 nlabel 6036 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.062301.label Connecting and filling vertices in path at fillseed 111054 Finding path....................................................................................................................................................................................................................................... done Filling 111054 nlabel 7317 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.062401.label Connecting and filling vertices in path at fillseed 110671 Finding path......................................................................................................................................................................... done Filling 110671 nlabel 7655 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.062501.label Connecting and filling vertices in path at fillseed 112125 Finding path.................................................................................................................................................................................... done Filling 112125 nlabel 6163 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.062601.label Connecting and filling vertices in path at fillseed 111065 Finding path..................................................................................................................................................................................................... done Filling 111065 nlabel 6901 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.062701.label Connecting and filling vertices in path at fillseed 111892 Finding path.................................................................................................................................. done Filling 111892 nlabel 6483 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.062801.label Connecting and filling vertices in path at fillseed 112488 Finding path........................................................................................................................................................... done Filling 112488 nlabel 5394 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.062901.label Connecting and filling vertices in path at fillseed 112358 Finding path.................................................................................................................................................................................... done Filling 112358 nlabel 7235 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.063001.label Connecting and filling vertices in path at fillseed 112283 Finding path........................................................................................................................................... done Filling 112283 nlabel 6122 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.063101.label Connecting and filling vertices in path at fillseed 113461 Finding path......................................................................................................................................................................... done Filling 113461 nlabel 5301 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.063201.label Connecting and filling vertices in path at fillseed 112486 Finding path........................................................................................................................................................................... done Filling 112486 nlabel 6962 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.063301.label Connecting and filling vertices in path at fillseed 112654 Finding path................................................................................................................. done Filling 112654 nlabel 5601 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.063401.label Connecting and filling vertices in path at fillseed 113772 Finding path............................................................................................................................................................... done Filling 113772 nlabel 4974 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.063501.label Connecting and filling vertices in path at fillseed 112076 Finding path................................................................................................................................................................................................................ done Filling 112076 nlabel 7607 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.063601.label Connecting and filling vertices in path at fillseed 112968 Finding path................................................................................................................................................... done Filling 112968 nlabel 6488 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.063701.label Connecting and filling vertices in path at fillseed 113548 Finding path.......................................................................................................................... done Filling 113548 nlabel 5893 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.063801.label Connecting and filling vertices in path at fillseed 112859 Finding path......................................................................................................................................................................................................... done Filling 112859 nlabel 7176 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.063901.label Connecting and filling vertices in path at fillseed 112630 Finding path.................................................................................................................. done Filling 112630 nlabel 5858 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.064001.label Connecting and filling vertices in path at fillseed 113475 Finding path............................................................................................................................................................................................................................. done Filling 113475 nlabel 5733 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.064101.label Connecting and filling vertices in path at fillseed 112228 Finding path................................................................................................................ done Filling 112228 nlabel 5870 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.064201.label Connecting and filling vertices in path at fillseed 113989 Finding path........................................................................................................................................................................... done Filling 113989 nlabel 4955 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.064301.label Connecting and filling vertices in path at fillseed 113953 Finding path........................................................................................................................................................................................... done Filling 113953 nlabel 7080 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.064401.label Connecting and filling vertices in path at fillseed 113841 Finding path.......................................................................................................................... done Filling 113841 nlabel 6065 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.064501.label Connecting and filling vertices in path at fillseed 113787 Finding path................................................................................................................................................................ done Filling 113787 nlabel 5640 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.064601.label Connecting and filling vertices in path at fillseed 113953 Finding path............................................................................................................................................................................................ done Filling 113953 nlabel 6601 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.064701.label Connecting and filling vertices in path at fillseed 114207 Finding path................................................................................................................................................ done Filling 114207 nlabel 5274 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.064801.label Connecting and filling vertices in path at fillseed 114037 Finding path................................................................................................................................................................................................ done Filling 114037 nlabel 6599 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.064901.label Connecting and filling vertices in path at fillseed 113854 Finding path......................................................................................................................................................................... done Filling 113854 nlabel 6628 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.065001.label Connecting and filling vertices in path at fillseed 114333 Finding path.............................................................................................................................................. done Filling 114333 nlabel 5724 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.065101.label Connecting and filling vertices in path at fillseed 114303 Finding path............................................................................................................................................................. done Filling 114303 nlabel 6352 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.065201.label Connecting and filling vertices in path at fillseed 114359 Finding path..................................................................................................................................................................... done Filling 114359 nlabel 6456 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial.065301.label ================= compute_lgi('lh.pial','lh.pial-outer-smoothed','/home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial-outer-smoothed-normals.asc',100,25,'/home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial'); exit ================= MATLAB is selecting SOFTWARE OPENGL rendering. < M A T L A B (R) > Copyright 1984-2021 The MathWorks, Inc. R2021a (9.10.0.1602886) 64-bit (glnxa64) February 17, 2021 Warning: Unable to create personal MATLAB work folder:/home/yarkin/Documents/MATLAB For online documentation, see https://www.mathworks.com/support For product information, visit www.mathworks.com. >> loading datas ... ...reading surface file: lh.pial ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.05 sec) ...reading surface file: lh.pial-outer-smoothed ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.01 sec) preparing outer mesh structure ... face 5000 / 130616 face 10000 / 130616 face 15000 / 130616 face 20000 / 130616 face 25000 / 130616 face 30000 / 130616 face 35000 / 130616 face 40000 / 130616 face 45000 / 130616 face 50000 / 130616 face 55000 / 130616 face 60000 / 130616 face 65000 / 130616 face 70000 / 130616 face 75000 / 130616 face 80000 / 130616 face 85000 / 130616 face 90000 / 130616 face 95000 / 130616 face 100000 / 130616 face 105000 / 130616 face 110000 / 130616 face 115000 / 130616 face 120000 / 130616 face 125000 / 130616 face 130000 / 130616 reading normals info ... mesh_outer = struct with fields: vertices: [65310x3 double] faces: [130616x3 double] facesOfVertex: [65310x1 struct] vertexNormal: [65310x3 double] preparing pial mesh structure ... face 5000 / 235772 face 10000 / 235772 face 15000 / 235772 face 20000 / 235772 face 25000 / 235772 face 30000 / 235772 face 35000 / 235772 face 40000 / 235772 face 45000 / 235772 face 50000 / 235772 face 55000 / 235772 face 60000 / 235772 face 65000 / 235772 face 70000 / 235772 face 75000 / 235772 face 80000 / 235772 face 85000 / 235772 face 90000 / 235772 face 95000 / 235772 face 100000 / 235772 face 105000 / 235772 face 110000 / 235772 face 115000 / 235772 face 120000 / 235772 face 125000 / 235772 face 130000 / 235772 face 135000 / 235772 face 140000 / 235772 face 145000 / 235772 face 150000 / 235772 face 155000 / 235772 face 160000 / 235772 face 165000 / 235772 face 170000 / 235772 face 175000 / 235772 face 180000 / 235772 face 185000 / 235772 face 190000 / 235772 face 195000 / 235772 face 200000 / 235772 face 205000 / 235772 face 210000 / 235772 face 215000 / 235772 face 220000 / 235772 face 225000 / 235772 face 230000 / 235772 face 235000 / 235772 mesh_total = struct with fields: vertices: [117888x3 double] faces: [235772x3 double] facesOfVertex: [117888x1 struct] ...searching for mesh edges...done (60.74 sec). loading outer area information... lGI for vertex number 1 of the outer mesh is 3.024 ratio saved at 1 lGI for vertex number 101 of the outer mesh is 2.2091 lGI for vertex number 201 of the outer mesh is 2.8643 lGI for vertex number 301 of the outer mesh is 2.6823 lGI for vertex number 401 of the outer mesh is 2.8483 lGI for vertex number 501 of the outer mesh is 3.2199 lGI for vertex number 601 of the outer mesh is 2.4675 lGI for vertex number 701 of the outer mesh is 2.6444 lGI for vertex number 801 of the outer mesh is 2.7233 lGI for vertex number 901 of the outer mesh is 2.4909 lGI for vertex number 1001 of the outer mesh is 2.5519 lGI for vertex number 1101 of the outer mesh is 2.6256 lGI for vertex number 1201 of the outer mesh is 2.6515 lGI for vertex number 1301 of the outer mesh is 2.7919 lGI for vertex number 1401 of the outer mesh is 2.5545 lGI for vertex number 1501 of the outer mesh is 2.4021 lGI for vertex number 1601 of the outer mesh is 2.6408 lGI for vertex number 1701 of the outer mesh is 2.2736 lGI for vertex number 1801 of the outer mesh is 2.4985 lGI for vertex number 1901 of the outer mesh is 2.7092 lGI for vertex number 2001 of the outer mesh is 2.7048 lGI for vertex number 2101 of the outer mesh is 2.5672 lGI for vertex number 2201 of the outer mesh is 2.4485 lGI for vertex number 2301 of the outer mesh is 2.5197 lGI for vertex number 2401 of the outer mesh is 2.3125 lGI for vertex number 2501 of the outer mesh is 2.812 lGI for vertex number 2601 of the outer mesh is 3.6078 lGI for vertex number 2701 of the outer mesh is 2.2432 lGI for vertex number 2801 of the outer mesh is 2.6863 lGI for vertex number 2901 of the outer mesh is 2.5358 lGI for vertex number 3001 of the outer mesh is 2.3444 lGI for vertex number 3101 of the outer mesh is 2.2304 lGI for vertex number 3201 of the outer mesh is 2.3699 lGI for vertex number 3301 of the outer mesh is 2.5258 lGI for vertex number 3401 of the outer mesh is 3.1081 lGI for vertex number 3501 of the outer mesh is 2.2384 lGI for vertex number 3601 of the outer mesh is 2.359 lGI for vertex number 3701 of the outer mesh is 2.2263 lGI for vertex number 3801 of the outer mesh is 2.6198 lGI for vertex number 3901 of the outer mesh is 2.1433 lGI for vertex number 4001 of the outer mesh is 2.3908 lGI for vertex number 4101 of the outer mesh is 2.783 lGI for vertex number 4201 of the outer mesh is 2.2908 lGI for vertex number 4301 of the outer mesh is 2.5758 lGI for vertex number 4401 of the outer mesh is 2.2474 lGI for vertex number 4501 of the outer mesh is 3.3511 lGI for vertex number 4601 of the outer mesh is 2.0826 lGI for vertex number 4701 of the outer mesh is 2.8688 lGI for vertex number 4801 of the outer mesh is 2.1711 lGI for vertex number 4901 of the outer mesh is 2.5939 lGI for vertex number 5001 of the outer mesh is 2.6876 lGI for vertex number 5101 of the outer mesh is 2.6625 lGI for vertex number 5201 of the outer mesh is 2.6239 lGI for vertex number 5301 of the outer mesh is 2.0784 lGI for vertex number 5401 of the outer mesh is 2.6171 lGI for vertex number 5501 of the outer mesh is 2.5665 lGI for vertex number 5601 of the outer mesh is 2.7742 lGI for vertex number 5701 of the outer mesh is 2.3835 lGI for vertex number 5801 of the outer mesh is 2.4012 lGI for vertex number 5901 of the outer mesh is 2.6274 lGI for vertex number 6001 of the outer mesh is 2.7483 lGI for vertex number 6101 of the outer mesh is 2.322 lGI for vertex number 6201 of the outer mesh is 2.6406 lGI for vertex number 6301 of the outer mesh is 2.7388 lGI for vertex number 6401 of the outer mesh is 3.1753 lGI for vertex number 6501 of the outer mesh is 2.4152 lGI for vertex number 6601 of the outer mesh is 2.4604 lGI for vertex number 6701 of the outer mesh is 2.3343 lGI for vertex number 6801 of the outer mesh is 3.176 lGI for vertex number 6901 of the outer mesh is 2.1061 lGI for vertex number 7001 of the outer mesh is 2.7559 lGI for vertex number 7101 of the outer mesh is 2.2861 lGI for vertex number 7201 of the outer mesh is 2.9314 lGI for vertex number 7301 of the outer mesh is 3.0752 lGI for vertex number 7401 of the outer mesh is 2.7654 lGI for vertex number 7501 of the outer mesh is 2.7397 lGI for vertex number 7601 of the outer mesh is 2.7174 lGI for vertex number 7701 of the outer mesh is 3.0524 lGI for vertex number 7801 of the outer mesh is 2.3904 lGI for vertex number 7901 of the outer mesh is 2.6204 lGI for vertex number 8001 of the outer mesh is 3.1144 lGI for vertex number 8101 of the outer mesh is 2.3701 lGI for vertex number 8201 of the outer mesh is 2.5383 lGI for vertex number 8301 of the outer mesh is 2.8069 lGI for vertex number 8401 of the outer mesh is 2.5125 lGI for vertex number 8501 of the outer mesh is 2.5667 lGI for vertex number 8601 of the outer mesh is 3.0716 lGI for vertex number 8701 of the outer mesh is 2.9039 lGI for vertex number 8801 of the outer mesh is 2.3235 lGI for vertex number 8901 of the outer mesh is 3.4378 lGI for vertex number 9001 of the outer mesh is 2.2784 lGI for vertex number 9101 of the outer mesh is 2.8692 lGI for vertex number 9201 of the outer mesh is 2.3047 lGI for vertex number 9301 of the outer mesh is 2.3312 lGI for vertex number 9401 of the outer mesh is 2.2961 lGI for vertex number 9501 of the outer mesh is 2.4599 lGI for vertex number 9601 of the outer mesh is 2.5623 lGI for vertex number 9701 of the outer mesh is 3.3902 lGI for vertex number 9801 of the outer mesh is 3.2928 lGI for vertex number 9901 of the outer mesh is 2.337 lGI for vertex number 10001 of the outer mesh is 2.3829 ratio saved at 10001 lGI for vertex number 10101 of the outer mesh is 2.6839 lGI for vertex number 10201 of the outer mesh is 2.2652 lGI for vertex number 10301 of the outer mesh is 2.9787 lGI for vertex number 10401 of the outer mesh is 2.3373 lGI for vertex number 10501 of the outer mesh is 2.126 lGI for vertex number 10601 of the outer mesh is 3.25 lGI for vertex number 10701 of the outer mesh is 2.3834 lGI for vertex number 10801 of the outer mesh is 2.4091 lGI for vertex number 10901 of the outer mesh is 2.2363 lGI for vertex number 11001 of the outer mesh is 2.2198 lGI for vertex number 11101 of the outer mesh is 2.9115 lGI for vertex number 11201 of the outer mesh is 2.3543 lGI for vertex number 11301 of the outer mesh is 2.3268 lGI for vertex number 11401 of the outer mesh is 1.8704 lGI for vertex number 11501 of the outer mesh is 2.4985 lGI for vertex number 11601 of the outer mesh is 2.7446 lGI for vertex number 11701 of the outer mesh is 3.3358 lGI for vertex number 11801 of the outer mesh is 2.5041 lGI for vertex number 11901 of the outer mesh is 2.788 lGI for vertex number 12001 of the outer mesh is 2.8953 lGI for vertex number 12101 of the outer mesh is 2.2869 lGI for vertex number 12201 of the outer mesh is 2.9427 lGI for vertex number 12301 of the outer mesh is 2.1813 lGI for vertex number 12401 of the outer mesh is 2.8072 lGI for vertex number 12501 of the outer mesh is 3.5763 lGI for vertex number 12601 of the outer mesh is 2.2129 lGI for vertex number 12701 of the outer mesh is 2.7314 lGI for vertex number 12801 of the outer mesh is 3.0834 lGI for vertex number 12901 of the outer mesh is 2.923 lGI for vertex number 13001 of the outer mesh is 2.3124 lGI for vertex number 13101 of the outer mesh is 3.3322 lGI for vertex number 13201 of the outer mesh is 2.8124 lGI for vertex number 13301 of the outer mesh is 3.0728 lGI for vertex number 13401 of the outer mesh is 2.8635 lGI for vertex number 13501 of the outer mesh is 2.3279 lGI for vertex number 13601 of the outer mesh is 2.2555 lGI for vertex number 13701 of the outer mesh is 2.9837 lGI for vertex number 13801 of the outer mesh is 2.4842 lGI for vertex number 13901 of the outer mesh is 2.4063 lGI for vertex number 14001 of the outer mesh is 3.1436 lGI for vertex number 14101 of the outer mesh is 3.0018 lGI for vertex number 14201 of the outer mesh is 2.2495 lGI for vertex number 14301 of the outer mesh is 2.2531 lGI for vertex number 14401 of the outer mesh is 3.3898 lGI for vertex number 14501 of the outer mesh is 2.346 lGI for vertex number 14601 of the outer mesh is 2.0775 lGI for vertex number 14701 of the outer mesh is 2.3517 lGI for vertex number 14801 of the outer mesh is 3.3087 lGI for vertex number 14901 of the outer mesh is 2.4958 lGI for vertex number 15001 of the outer mesh is 2.3248 lGI for vertex number 15101 of the outer mesh is 2.3822 lGI for vertex number 15201 of the outer mesh is 2.3544 lGI for vertex number 15301 of the outer mesh is 3.141 lGI for vertex number 15401 of the outer mesh is 2.3087 lGI for vertex number 15501 of the outer mesh is 2.3497 lGI for vertex number 15601 of the outer mesh is 3.2053 lGI for vertex number 15701 of the outer mesh is 3.0725 lGI for vertex number 15801 of the outer mesh is 2.0478 lGI for vertex number 15901 of the outer mesh is 2.23 lGI for vertex number 16001 of the outer mesh is 2.2496 lGI for vertex number 16101 of the outer mesh is 2.2591 lGI for vertex number 16201 of the outer mesh is 2.2595 lGI for vertex number 16301 of the outer mesh is 3.0071 lGI for vertex number 16401 of the outer mesh is 3.3641 lGI for vertex number 16501 of the outer mesh is 2.3347 lGI for vertex number 16601 of the outer mesh is 1.9858 lGI for vertex number 16701 of the outer mesh is 2.6613 lGI for vertex number 16801 of the outer mesh is 3.5219 lGI for vertex number 16901 of the outer mesh is 2.9728 lGI for vertex number 17001 of the outer mesh is 3.6068 lGI for vertex number 17101 of the outer mesh is 2.2351 lGI for vertex number 17201 of the outer mesh is 2.4606 lGI for vertex number 17301 of the outer mesh is 2.1683 lGI for vertex number 17401 of the outer mesh is 3.2015 lGI for vertex number 17501 of the outer mesh is 2.5017 lGI for vertex number 17601 of the outer mesh is 2.1887 lGI for vertex number 17701 of the outer mesh is 1.9421 lGI for vertex number 17801 of the outer mesh is 2.1171 lGI for vertex number 17901 of the outer mesh is 2.7056 lGI for vertex number 18001 of the outer mesh is 2.2366 lGI for vertex number 18101 of the outer mesh is 2.1285 lGI for vertex number 18201 of the outer mesh is 3.307 lGI for vertex number 18301 of the outer mesh is 2.9444 lGI for vertex number 18401 of the outer mesh is 3.234 lGI for vertex number 18501 of the outer mesh is 1.8449 lGI for vertex number 18601 of the outer mesh is 2.2314 lGI for vertex number 18701 of the outer mesh is 3.4279 lGI for vertex number 18801 of the outer mesh is 2.5325 lGI for vertex number 18901 of the outer mesh is 2.1191 lGI for vertex number 19001 of the outer mesh is 2.096 lGI for vertex number 19101 of the outer mesh is 2.2058 lGI for vertex number 19201 of the outer mesh is 2.4072 lGI for vertex number 19301 of the outer mesh is 2.5539 lGI for vertex number 19401 of the outer mesh is 1.941 lGI for vertex number 19501 of the outer mesh is 2.2518 lGI for vertex number 19601 of the outer mesh is 2.1329 lGI for vertex number 19701 of the outer mesh is 2.7078 lGI for vertex number 19801 of the outer mesh is 2.0947 lGI for vertex number 19901 of the outer mesh is 3.3837 lGI for vertex number 20001 of the outer mesh is 2.1871 ratio saved at 20001 lGI for vertex number 20101 of the outer mesh is 2.0815 lGI for vertex number 20201 of the outer mesh is 2.7343 lGI for vertex number 20301 of the outer mesh is 3.2568 lGI for vertex number 20401 of the outer mesh is 2.4486 lGI for vertex number 20501 of the outer mesh is 2.5976 lGI for vertex number 20601 of the outer mesh is 2.919 lGI for vertex number 20701 of the outer mesh is 1.8252 lGI for vertex number 20801 of the outer mesh is 3.0411 lGI for vertex number 20901 of the outer mesh is 2.328 lGI for vertex number 21001 of the outer mesh is 2.5073 lGI for vertex number 21101 of the outer mesh is 2.2445 lGI for vertex number 21201 of the outer mesh is 2.9449 lGI for vertex number 21301 of the outer mesh is 2.0163 lGI for vertex number 21401 of the outer mesh is 2.4609 lGI for vertex number 21501 of the outer mesh is 1.8842 lGI for vertex number 21601 of the outer mesh is 2.4764 lGI for vertex number 21701 of the outer mesh is 3.199 lGI for vertex number 21801 of the outer mesh is 2.6512 lGI for vertex number 21901 of the outer mesh is 3.0726 lGI for vertex number 22001 of the outer mesh is 2.3278 lGI for vertex number 22101 of the outer mesh is 2.8354 lGI for vertex number 22201 of the outer mesh is 2.1248 lGI for vertex number 22301 of the outer mesh is 2.2663 lGI for vertex number 22401 of the outer mesh is 2.2472 lGI for vertex number 22501 of the outer mesh is 2.3186 lGI for vertex number 22601 of the outer mesh is 3.2446 lGI for vertex number 22701 of the outer mesh is 3.2532 lGI for vertex number 22801 of the outer mesh is 2.8448 lGI for vertex number 22901 of the outer mesh is 2.1485 lGI for vertex number 23001 of the outer mesh is 2.3369 lGI for vertex number 23101 of the outer mesh is 1.9496 lGI for vertex number 23201 of the outer mesh is 2.0825 lGI for vertex number 23301 of the outer mesh is 2.7491 lGI for vertex number 23401 of the outer mesh is 2.1152 lGI for vertex number 23501 of the outer mesh is 2.4319 lGI for vertex number 23601 of the outer mesh is 2.5357 lGI for vertex number 23701 of the outer mesh is 2.5495 lGI for vertex number 23801 of the outer mesh is 2.9002 lGI for vertex number 23901 of the outer mesh is 2.3172 lGI for vertex number 24001 of the outer mesh is 2.8216 lGI for vertex number 24101 of the outer mesh is 2.7464 lGI for vertex number 24201 of the outer mesh is 1.8662 lGI for vertex number 24301 of the outer mesh is 2.1195 lGI for vertex number 24401 of the outer mesh is 1.7406 lGI for vertex number 24501 of the outer mesh is 3.0083 lGI for vertex number 24601 of the outer mesh is 2.7928 lGI for vertex number 24701 of the outer mesh is 2.4936 lGI for vertex number 24801 of the outer mesh is 2.1851 lGI for vertex number 24901 of the outer mesh is 2.2808 lGI for vertex number 25001 of the outer mesh is 3.1809 lGI for vertex number 25101 of the outer mesh is 1.9726 lGI for vertex number 25201 of the outer mesh is 3.2227 lGI for vertex number 25301 of the outer mesh is 1.8162 lGI for vertex number 25401 of the outer mesh is 2.4458 lGI for vertex number 25501 of the outer mesh is 2.6689 lGI for vertex number 25601 of the outer mesh is 2.7038 lGI for vertex number 25701 of the outer mesh is 2.3181 lGI for vertex number 25801 of the outer mesh is 2.3645 lGI for vertex number 25901 of the outer mesh is 2.1825 lGI for vertex number 26001 of the outer mesh is 2.039 lGI for vertex number 26101 of the outer mesh is 2.5099 lGI for vertex number 26201 of the outer mesh is 1.7812 lGI for vertex number 26301 of the outer mesh is 2.3088 lGI for vertex number 26401 of the outer mesh is 2.7615 lGI for vertex number 26501 of the outer mesh is 2.7482 lGI for vertex number 26601 of the outer mesh is 1.6925 lGI for vertex number 26701 of the outer mesh is 2.0696 lGI for vertex number 26801 of the outer mesh is 2.5177 lGI for vertex number 26901 of the outer mesh is 3.0336 lGI for vertex number 27001 of the outer mesh is 2.041 lGI for vertex number 27101 of the outer mesh is 2.605 lGI for vertex number 27201 of the outer mesh is 1.7892 lGI for vertex number 27301 of the outer mesh is 2.6152 lGI for vertex number 27401 of the outer mesh is 2.0724 lGI for vertex number 27501 of the outer mesh is 1.9322 lGI for vertex number 27601 of the outer mesh is 1.7865 lGI for vertex number 27701 of the outer mesh is 2.0959 lGI for vertex number 27801 of the outer mesh is 2.5146 lGI for vertex number 27901 of the outer mesh is 3.036 lGI for vertex number 28001 of the outer mesh is 2.7837 lGI for vertex number 28101 of the outer mesh is 1.7266 lGI for vertex number 28201 of the outer mesh is 2.7031 lGI for vertex number 28301 of the outer mesh is 2.8413 lGI for vertex number 28401 of the outer mesh is 2.8898 lGI for vertex number 28501 of the outer mesh is 1.7709 lGI for vertex number 28601 of the outer mesh is 2.1899 lGI for vertex number 28701 of the outer mesh is 2.4556 lGI for vertex number 28801 of the outer mesh is 2.7999 lGI for vertex number 28901 of the outer mesh is 2.5309 lGI for vertex number 29001 of the outer mesh is 1.7997 lGI for vertex number 29101 of the outer mesh is 2.1865 lGI for vertex number 29201 of the outer mesh is 2.2069 lGI for vertex number 29301 of the outer mesh is 2.8803 lGI for vertex number 29401 of the outer mesh is 1.9546 lGI for vertex number 29501 of the outer mesh is 2.3662 lGI for vertex number 29601 of the outer mesh is 1.9759 lGI for vertex number 29701 of the outer mesh is 2.6472 lGI for vertex number 29801 of the outer mesh is 2.8112 lGI for vertex number 29901 of the outer mesh is 2.8044 lGI for vertex number 30001 of the outer mesh is 1.9806 ratio saved at 30001 lGI for vertex number 30101 of the outer mesh is 2.0534 lGI for vertex number 30201 of the outer mesh is 1.8853 lGI for vertex number 30301 of the outer mesh is 2.9841 lGI for vertex number 30401 of the outer mesh is 2.3519 lGI for vertex number 30501 of the outer mesh is 1.7571 lGI for vertex number 30601 of the outer mesh is 2.5708 lGI for vertex number 30701 of the outer mesh is 3.0954 lGI for vertex number 30801 of the outer mesh is 2.9913 lGI for vertex number 30901 of the outer mesh is 3.1569 lGI for vertex number 31001 of the outer mesh is 2.1896 lGI for vertex number 31101 of the outer mesh is 2.6857 lGI for vertex number 31201 of the outer mesh is 1.8983 lGI for vertex number 31301 of the outer mesh is 2.9204 lGI for vertex number 31401 of the outer mesh is 1.7731 lGI for vertex number 31501 of the outer mesh is 2.0733 lGI for vertex number 31601 of the outer mesh is 2.6766 lGI for vertex number 31701 of the outer mesh is 2.9583 lGI for vertex number 31801 of the outer mesh is 3.0386 lGI for vertex number 31901 of the outer mesh is 2.8718 lGI for vertex number 32001 of the outer mesh is 1.591 lGI for vertex number 32101 of the outer mesh is 2.8159 lGI for vertex number 32201 of the outer mesh is 2.883 lGI for vertex number 32301 of the outer mesh is 2.7003 lGI for vertex number 32401 of the outer mesh is 1.6005 lGI for vertex number 32501 of the outer mesh is 2.645 lGI for vertex number 32601 of the outer mesh is 2.2503 lGI for vertex number 32701 of the outer mesh is 2.6645 lGI for vertex number 32801 of the outer mesh is 2.6647 lGI for vertex number 32901 of the outer mesh is 1.9205 lGI for vertex number 33001 of the outer mesh is 2.144 lGI for vertex number 33101 of the outer mesh is 3.0504 lGI for vertex number 33201 of the outer mesh is 2.9491 lGI for vertex number 33301 of the outer mesh is 2.6954 lGI for vertex number 33401 of the outer mesh is 1.9553 lGI for vertex number 33501 of the outer mesh is 2.7307 lGI for vertex number 33601 of the outer mesh is 1.9671 lGI for vertex number 33701 of the outer mesh is 2.8275 lGI for vertex number 33801 of the outer mesh is 2.9414 lGI for vertex number 33901 of the outer mesh is 1.7223 lGI for vertex number 34001 of the outer mesh is 1.6658 lGI for vertex number 34101 of the outer mesh is 2.6671 lGI for vertex number 34201 of the outer mesh is 2.801 lGI for vertex number 34301 of the outer mesh is 2.9625 lGI for vertex number 34401 of the outer mesh is 1.4127 lGI for vertex number 34501 of the outer mesh is 2.6562 lGI for vertex number 34601 of the outer mesh is 2.4955 lGI for vertex number 34701 of the outer mesh is 2.5783 lGI for vertex number 34801 of the outer mesh is 2.4559 lGI for vertex number 34901 of the outer mesh is 2.9167 lGI for vertex number 35001 of the outer mesh is 2.7529 lGI for vertex number 35101 of the outer mesh is 1.8859 lGI for vertex number 35201 of the outer mesh is 2.6676 lGI for vertex number 35301 of the outer mesh is 2.7603 lGI for vertex number 35401 of the outer mesh is 3.0238 lGI for vertex number 35501 of the outer mesh is 2.27 lGI for vertex number 35601 of the outer mesh is 2.5658 lGI for vertex number 35701 of the outer mesh is 2.2391 lGI for vertex number 35801 of the outer mesh is 3.0118 lGI for vertex number 35901 of the outer mesh is 2.8987 lGI for vertex number 36001 of the outer mesh is 3.0152 lGI for vertex number 36101 of the outer mesh is 1.8623 lGI for vertex number 36201 of the outer mesh is 2.7408 lGI for vertex number 36301 of the outer mesh is 2.5696 lGI for vertex number 36401 of the outer mesh is 2.9376 lGI for vertex number 36501 of the outer mesh is 3.4208 lGI for vertex number 36601 of the outer mesh is 1.694 lGI for vertex number 36701 of the outer mesh is 2.6981 lGI for vertex number 36801 of the outer mesh is 2.5682 lGI for vertex number 36901 of the outer mesh is 2.972 lGI for vertex number 37001 of the outer mesh is 2.2157 lGI for vertex number 37101 of the outer mesh is 1.5459 lGI for vertex number 37201 of the outer mesh is 2.7053 lGI for vertex number 37301 of the outer mesh is 2.3802 lGI for vertex number 37401 of the outer mesh is 2.033 lGI for vertex number 37501 of the outer mesh is 3.2665 lGI for vertex number 37601 of the outer mesh is 2.0511 lGI for vertex number 37701 of the outer mesh is 2.7225 lGI for vertex number 37801 of the outer mesh is 2.4137 lGI for vertex number 37901 of the outer mesh is 2.1397 lGI for vertex number 38001 of the outer mesh is 2.9797 lGI for vertex number 38101 of the outer mesh is 1.7577 lGI for vertex number 38201 of the outer mesh is 2.6624 lGI for vertex number 38301 of the outer mesh is 2.2415 lGI for vertex number 38401 of the outer mesh is 3.2008 lGI for vertex number 38501 of the outer mesh is 2.8985 lGI for vertex number 38601 of the outer mesh is 1.7527 lGI for vertex number 38701 of the outer mesh is 2.6707 lGI for vertex number 38801 of the outer mesh is 2.7582 lGI for vertex number 38901 of the outer mesh is 3.2509 lGI for vertex number 39001 of the outer mesh is 3.005 lGI for vertex number 39101 of the outer mesh is 1.5986 lGI for vertex number 39201 of the outer mesh is 1.9678 lGI for vertex number 39301 of the outer mesh is 3.4819 lGI for vertex number 39401 of the outer mesh is 3.2193 lGI for vertex number 39501 of the outer mesh is 1.3631 lGI for vertex number 39601 of the outer mesh is 2.516 lGI for vertex number 39701 of the outer mesh is 2.1602 lGI for vertex number 39801 of the outer mesh is 2.1741 lGI for vertex number 39901 of the outer mesh is 2.2216 lGI for vertex number 40001 of the outer mesh is 3.2683 ratio saved at 40001 lGI for vertex number 40101 of the outer mesh is 1.6866 lGI for vertex number 40201 of the outer mesh is 2.3943 lGI for vertex number 40301 of the outer mesh is 3.1089 lGI for vertex number 40401 of the outer mesh is 3.3127 lGI for vertex number 40501 of the outer mesh is 1.284 lGI for vertex number 40601 of the outer mesh is 2.0494 lGI for vertex number 40701 of the outer mesh is 2.37 lGI for vertex number 40801 of the outer mesh is 3.1079 lGI for vertex number 40901 of the outer mesh is 3.8432 lGI for vertex number 41001 of the outer mesh is 1.8818 lGI for vertex number 41101 of the outer mesh is 2.2249 lGI for vertex number 41201 of the outer mesh is 2.4911 lGI for vertex number 41301 of the outer mesh is 2.9616 lGI for vertex number 41401 of the outer mesh is 4.193 lGI for vertex number 41501 of the outer mesh is 2.7884 lGI for vertex number 41601 of the outer mesh is 2.2884 lGI for vertex number 41701 of the outer mesh is 1.955 lGI for vertex number 41801 of the outer mesh is 2.0334 lGI for vertex number 41901 of the outer mesh is 2.0525 lGI for vertex number 42001 of the outer mesh is 2.4535 lGI for vertex number 42101 of the outer mesh is 2.304 lGI for vertex number 42201 of the outer mesh is 2.5151 lGI for vertex number 42301 of the outer mesh is 3.0228 lGI for vertex number 42401 of the outer mesh is 2.6523 lGI for vertex number 42501 of the outer mesh is 3.0864 lGI for vertex number 42601 of the outer mesh is 2.2224 lGI for vertex number 42701 of the outer mesh is 2.5311 lGI for vertex number 42801 of the outer mesh is 2.1508 lGI for vertex number 42901 of the outer mesh is 2.8442 lGI for vertex number 43001 of the outer mesh is 1.8015 lGI for vertex number 43101 of the outer mesh is 2.2194 lGI for vertex number 43201 of the outer mesh is 2.0559 lGI for vertex number 43301 of the outer mesh is 3.5746 lGI for vertex number 43401 of the outer mesh is 1.645 lGI for vertex number 43501 of the outer mesh is 2.2481 lGI for vertex number 43601 of the outer mesh is 1.8037 lGI for vertex number 43701 of the outer mesh is 2.0343 lGI for vertex number 43801 of the outer mesh is 3.877 lGI for vertex number 43901 of the outer mesh is 1.7198 lGI for vertex number 44001 of the outer mesh is 2.3573 lGI for vertex number 44101 of the outer mesh is 2.4335 lGI for vertex number 44201 of the outer mesh is 3.2936 lGI for vertex number 44301 of the outer mesh is 1.3074 lGI for vertex number 44401 of the outer mesh is 2.3721 lGI for vertex number 44501 of the outer mesh is 2.1367 lGI for vertex number 44601 of the outer mesh is 2.0676 lGI for vertex number 44701 of the outer mesh is 3.6195 lGI for vertex number 44801 of the outer mesh is 1.7017 lGI for vertex number 44901 of the outer mesh is 2.3141 lGI for vertex number 45001 of the outer mesh is 2.5137 lGI for vertex number 45101 of the outer mesh is 3.2146 lGI for vertex number 45201 of the outer mesh is 3.8186 lGI for vertex number 45301 of the outer mesh is 1.9615 lGI for vertex number 45401 of the outer mesh is 2.2191 lGI for vertex number 45501 of the outer mesh is 1.8933 lGI for vertex number 45601 of the outer mesh is 2.2365 lGI for vertex number 45701 of the outer mesh is 2.9026 lGI for vertex number 45801 of the outer mesh is 1.9004 lGI for vertex number 45901 of the outer mesh is 2.0206 lGI for vertex number 46001 of the outer mesh is 2.2096 lGI for vertex number 46101 of the outer mesh is 3.2186 lGI for vertex number 46201 of the outer mesh is 2.757 lGI for vertex number 46301 of the outer mesh is 2.9864 lGI for vertex number 46401 of the outer mesh is 1.7312 lGI for vertex number 46501 of the outer mesh is 2.3441 lGI for vertex number 46601 of the outer mesh is 2.485 lGI for vertex number 46701 of the outer mesh is 3.2484 lGI for vertex number 46801 of the outer mesh is 2.4807 lGI for vertex number 46901 of the outer mesh is 2.7149 lGI for vertex number 47001 of the outer mesh is 2.1404 lGI for vertex number 47101 of the outer mesh is 2.5019 lGI for vertex number 47201 of the outer mesh is 3.145 lGI for vertex number 47301 of the outer mesh is 2.8868 lGI for vertex number 47401 of the outer mesh is 1.7414 lGI for vertex number 47501 of the outer mesh is 2.1087 lGI for vertex number 47601 of the outer mesh is 1.9296 lGI for vertex number 47701 of the outer mesh is 3.0651 lGI for vertex number 47801 of the outer mesh is 1.8016 lGI for vertex number 47901 of the outer mesh is 2.4134 lGI for vertex number 48001 of the outer mesh is 2.6173 lGI for vertex number 48101 of the outer mesh is 2.8454 lGI for vertex number 48201 of the outer mesh is 1.6915 lGI for vertex number 48301 of the outer mesh is 2.4446 lGI for vertex number 48401 of the outer mesh is 2.6669 lGI for vertex number 48501 of the outer mesh is 2.9736 lGI for vertex number 48601 of the outer mesh is 3.9206 lGI for vertex number 48701 of the outer mesh is 1.9259 lGI for vertex number 48801 of the outer mesh is 2.2916 lGI for vertex number 48901 of the outer mesh is 1.9325 lGI for vertex number 49001 of the outer mesh is 2.9268 lGI for vertex number 49101 of the outer mesh is 2.808 lGI for vertex number 49201 of the outer mesh is 1.7633 lGI for vertex number 49301 of the outer mesh is 2.2013 lGI for vertex number 49401 of the outer mesh is 1.8988 lGI for vertex number 49501 of the outer mesh is 3.0226 lGI for vertex number 49601 of the outer mesh is 2.8919 lGI for vertex number 49701 of the outer mesh is 2.9792 lGI for vertex number 49801 of the outer mesh is 2.0319 lGI for vertex number 49901 of the outer mesh is 2.23 lGI for vertex number 50001 of the outer mesh is 1.7243 ratio saved at 50001 lGI for vertex number 50101 of the outer mesh is 1.9584 lGI for vertex number 50201 of the outer mesh is 3.7145 lGI for vertex number 50301 of the outer mesh is 1.8492 lGI for vertex number 50401 of the outer mesh is 2.2628 lGI for vertex number 50501 of the outer mesh is 2.389 lGI for vertex number 50601 of the outer mesh is 2.9238 lGI for vertex number 50701 of the outer mesh is 2.874 lGI for vertex number 50801 of the outer mesh is 1.8313 lGI for vertex number 50901 of the outer mesh is 2.1249 lGI for vertex number 51001 of the outer mesh is 2.6025 lGI for vertex number 51101 of the outer mesh is 1.8114 lGI for vertex number 51201 of the outer mesh is 2.8861 lGI for vertex number 51301 of the outer mesh is 1.8564 lGI for vertex number 51401 of the outer mesh is 2.2299 lGI for vertex number 51501 of the outer mesh is 1.773 lGI for vertex number 51601 of the outer mesh is 1.9449 lGI for vertex number 51701 of the outer mesh is 1.8006 lGI for vertex number 51801 of the outer mesh is 2.2247 lGI for vertex number 51901 of the outer mesh is 1.643 lGI for vertex number 52001 of the outer mesh is 3.2853 lGI for vertex number 52101 of the outer mesh is 2.7626 lGI for vertex number 52201 of the outer mesh is 1.881 lGI for vertex number 52301 of the outer mesh is 2.5209 lGI for vertex number 52401 of the outer mesh is 1.803 lGI for vertex number 52501 of the outer mesh is 3.0833 lGI for vertex number 52601 of the outer mesh is 1.9118 lGI for vertex number 52701 of the outer mesh is 2.0631 lGI for vertex number 52801 of the outer mesh is 2.8621 lGI for vertex number 52901 of the outer mesh is 1.7767 lGI for vertex number 53001 of the outer mesh is 2.4997 lGI for vertex number 53101 of the outer mesh is 1.6548 lGI for vertex number 53201 of the outer mesh is 3.1399 lGI for vertex number 53301 of the outer mesh is 2.1196 lGI for vertex number 53401 of the outer mesh is 2.0718 lGI for vertex number 53501 of the outer mesh is 2.4607 lGI for vertex number 53601 of the outer mesh is 2.0749 lGI for vertex number 53701 of the outer mesh is 3.2748 lGI for vertex number 53801 of the outer mesh is 1.7479 lGI for vertex number 53901 of the outer mesh is 2.717 lGI for vertex number 54001 of the outer mesh is 3.1673 lGI for vertex number 54101 of the outer mesh is 1.8799 lGI for vertex number 54201 of the outer mesh is 2.1643 lGI for vertex number 54301 of the outer mesh is 2.6288 lGI for vertex number 54401 of the outer mesh is 2.9059 lGI for vertex number 54501 of the outer mesh is 1.8073 lGI for vertex number 54601 of the outer mesh is 2.0362 lGI for vertex number 54701 of the outer mesh is 2.7418 lGI for vertex number 54801 of the outer mesh is 2.1958 lGI for vertex number 54901 of the outer mesh is 1.8717 lGI for vertex number 55001 of the outer mesh is 2.6396 lGI for vertex number 55101 of the outer mesh is 2.8241 lGI for vertex number 55201 of the outer mesh is 1.9904 lGI for vertex number 55301 of the outer mesh is 1.9437 lGI for vertex number 55401 of the outer mesh is 2.4522 lGI for vertex number 55501 of the outer mesh is 2.6774 lGI for vertex number 55601 of the outer mesh is 1.7104 lGI for vertex number 55701 of the outer mesh is 2.6342 lGI for vertex number 55801 of the outer mesh is 2.729 lGI for vertex number 55901 of the outer mesh is 1.9766 lGI for vertex number 56001 of the outer mesh is 2.0095 lGI for vertex number 56101 of the outer mesh is 2.5194 lGI for vertex number 56201 of the outer mesh is 1.9337 lGI for vertex number 56301 of the outer mesh is 1.6944 lGI for vertex number 56401 of the outer mesh is 2.3583 lGI for vertex number 56501 of the outer mesh is 2.7033 lGI for vertex number 56601 of the outer mesh is 2.0229 lGI for vertex number 56701 of the outer mesh is 1.9442 lGI for vertex number 56801 of the outer mesh is 2.6251 lGI for vertex number 56901 of the outer mesh is 2.1353 lGI for vertex number 57001 of the outer mesh is 2.1714 lGI for vertex number 57101 of the outer mesh is 2.3513 lGI for vertex number 57201 of the outer mesh is 2.2894 lGI for vertex number 57301 of the outer mesh is 1.8316 lGI for vertex number 57401 of the outer mesh is 2.1866 lGI for vertex number 57501 of the outer mesh is 2.5484 lGI for vertex number 57601 of the outer mesh is 1.9351 lGI for vertex number 57701 of the outer mesh is 2.1351 lGI for vertex number 57801 of the outer mesh is 2.5502 lGI for vertex number 57901 of the outer mesh is 1.8863 lGI for vertex number 58001 of the outer mesh is 2.0568 lGI for vertex number 58101 of the outer mesh is 2.6339 lGI for vertex number 58201 of the outer mesh is 1.7836 lGI for vertex number 58301 of the outer mesh is 2.0223 lGI for vertex number 58401 of the outer mesh is 2.5046 lGI for vertex number 58501 of the outer mesh is 1.9684 lGI for vertex number 58601 of the outer mesh is 1.8322 lGI for vertex number 58701 of the outer mesh is 1.8575 lGI for vertex number 58801 of the outer mesh is 2.0727 lGI for vertex number 58901 of the outer mesh is 1.8477 lGI for vertex number 59001 of the outer mesh is 2.174 lGI for vertex number 59101 of the outer mesh is 2.6972 lGI for vertex number 59201 of the outer mesh is 2.0448 lGI for vertex number 59301 of the outer mesh is 2.2715 lGI for vertex number 59401 of the outer mesh is 2.3075 lGI for vertex number 59501 of the outer mesh is 1.9674 lGI for vertex number 59601 of the outer mesh is 2.0279 lGI for vertex number 59701 of the outer mesh is 2.2644 lGI for vertex number 59801 of the outer mesh is 1.9026 lGI for vertex number 59901 of the outer mesh is 1.9131 lGI for vertex number 60001 of the outer mesh is 2.2235 ratio saved at 60001 lGI for vertex number 60101 of the outer mesh is 2.3242 lGI for vertex number 60201 of the outer mesh is 2.0368 lGI for vertex number 60301 of the outer mesh is 2.1184 lGI for vertex number 60401 of the outer mesh is 2.6287 lGI for vertex number 60501 of the outer mesh is 1.7573 lGI for vertex number 60601 of the outer mesh is 1.9301 lGI for vertex number 60701 of the outer mesh is 2.6624 lGI for vertex number 60801 of the outer mesh is 2.0923 lGI for vertex number 60901 of the outer mesh is 1.8934 lGI for vertex number 61001 of the outer mesh is 2.5705 lGI for vertex number 61101 of the outer mesh is 1.955 lGI for vertex number 61201 of the outer mesh is 1.9866 lGI for vertex number 61301 of the outer mesh is 2.0003 lGI for vertex number 61401 of the outer mesh is 1.9848 lGI for vertex number 61501 of the outer mesh is 1.9336 lGI for vertex number 61601 of the outer mesh is 2.3602 lGI for vertex number 61701 of the outer mesh is 1.9499 lGI for vertex number 61801 of the outer mesh is 2.0829 lGI for vertex number 61901 of the outer mesh is 2.4653 lGI for vertex number 62001 of the outer mesh is 2.0049 lGI for vertex number 62101 of the outer mesh is 2.1139 lGI for vertex number 62201 of the outer mesh is 2.3982 lGI for vertex number 62301 of the outer mesh is 2.0421 lGI for vertex number 62401 of the outer mesh is 2.3759 lGI for vertex number 62501 of the outer mesh is 2.4498 lGI for vertex number 62601 of the outer mesh is 2.1419 lGI for vertex number 62701 of the outer mesh is 2.2477 lGI for vertex number 62801 of the outer mesh is 2.0732 lGI for vertex number 62901 of the outer mesh is 1.9306 lGI for vertex number 63001 of the outer mesh is 2.1027 lGI for vertex number 63101 of the outer mesh is 2.1747 lGI for vertex number 63201 of the outer mesh is 2.0065 lGI for vertex number 63301 of the outer mesh is 2.2398 lGI for vertex number 63401 of the outer mesh is 2.0967 lGI for vertex number 63501 of the outer mesh is 1.8889 lGI for vertex number 63601 of the outer mesh is 2.3922 lGI for vertex number 63701 of the outer mesh is 2.2109 lGI for vertex number 63801 of the outer mesh is 2.1397 lGI for vertex number 63901 of the outer mesh is 2.2747 lGI for vertex number 64001 of the outer mesh is 2.0497 lGI for vertex number 64101 of the outer mesh is 2.1122 lGI for vertex number 64201 of the outer mesh is 1.9451 lGI for vertex number 64301 of the outer mesh is 2.0029 lGI for vertex number 64401 of the outer mesh is 2.0976 lGI for vertex number 64501 of the outer mesh is 1.9899 lGI for vertex number 64601 of the outer mesh is 2.1246 lGI for vertex number 64701 of the outer mesh is 2.0044 lGI for vertex number 64801 of the outer mesh is 2.0594 lGI for vertex number 64901 of the outer mesh is 2.2806 lGI for vertex number 65001 of the outer mesh is 2.0688 lGI for vertex number 65101 of the outer mesh is 2.088 lGI for vertex number 65201 of the outer mesh is 2.0528 lGI for vertex number 65301 of the outer mesh is 2.1613 .. Almost finished .. now back-propagating values on the folded mesh .. average_lGI_over_the_hemisphere = 2.5259 DONE. deltaT = 711.6700 ================= mris_convert -c /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial/lh.pial_lgi.asc lh.pial lh.pial_lgi ================= ================= rm -Rf /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-lh.pial ================= done. Start: Thu Mar 18 09:24:58 MSK 2021 End: Thu Mar 18 10:14:39 MSK 2021 @#@FSTIME 2021:03:18:09:24:58 mris_compute_lgi N 2 e 2980.98 S 719.98 U 7381.46 P 271% M 2050076 F 0 R 12123178 W 0 c 206707744 w 25155920 I 7592 O 453848 L 91 5 52 @#@FSLOADPOST 2021:03:18:10:14:39 mris_compute_lgi N 2 93 18 18 #-------------------------------------------- #@# Local Gyrification Index rh Thu Mar 18 10:14:39 MSK 2021 mris_compute_lgi --i rh.pial ================= rm -Rf /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial ================= ================= mkdir -p /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial ================= ================= mris_fill -c -r 1 rh.pial /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.filled.mgz ================= reading surface from rh.pial... writing filled volume to /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.filled.mgz... conforming output volume setting resolution for intermediate calculations to 1.0000 ================= make_outer_surface('/home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.filled.mgz',15,'/home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial-outer'); exit ================= MATLAB is selecting SOFTWARE OPENGL rendering. < M A T L A B (R) > Copyright 1984-2021 The MathWorks, Inc. R2021a (9.10.0.1602886) 64-bit (glnxa64) February 17, 2021 Warning: Unable to create personal MATLAB work folder:/home/yarkin/Documents/MATLAB For online documentation, see https://www.mathworks.com/support For product information, visit www.mathworks.com. >> reading filled volume... closing volume... morphological closing done. writing outer surface... ================= mris_extract_main_component /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial-outer /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial-outer-main ================= counting number of connected components... 64252 voxel in cpt #1: X=2 [v=64252,e=192750,f=128500] located at (26.824005, -15.926641, 43.046738) For the whole surface: X=2 [v=64252,e=192750,f=128500] One single component has been found nothing to do done ================= mris_smooth -nw -n 30 /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial-outer-main ./rh.pial-outer-smoothed ================= smoothing for 30 iterations smoothing surface tessellation for 30 iterations... smoothing complete - recomputing first and second fundamental forms... ================= mris_euler_number ./rh.pial-outer-smoothed ================= euler # = v-e+f = 2g-2: 64252 - 192750 + 128500 = 2 --> 0 holes F =2V-4: 128500 = 128504-4 (0) 2E=3F: 385500 = 385500 (0) total defect index = 0 ================= mris_convert -n rh.pial-outer-smoothed /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial-outer-smoothed-normals.asc ================= ================= find_corresponding_center_FSformat('rh.pial','rh.pial-outer-smoothed',100,'/home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial','/tmp/tmp.vXsKA7.m'); exit ================= MATLAB is selecting SOFTWARE OPENGL rendering. < M A T L A B (R) > Copyright 1984-2021 The MathWorks, Inc. R2021a (9.10.0.1602886) 64-bit (glnxa64) February 17, 2021 Warning: Unable to create personal MATLAB work folder:/home/yarkin/Documents/MATLAB For online documentation, see https://www.mathworks.com/support For product information, visit www.mathworks.com. >> ...reading surface file: rh.pial ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.06 sec) ...reading surface file: rh.pial-outer-smoothed ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.01 sec) deltaT = 14.1900 ================= make_roi_paths('rh.pial','rh.pial-outer-smoothed',25,100,'/home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial','/tmp/tmp.lx1tXW.m'); exit ================= MATLAB is selecting SOFTWARE OPENGL rendering. < M A T L A B (R) > Copyright 1984-2021 The MathWorks, Inc. R2021a (9.10.0.1602886) 64-bit (glnxa64) February 17, 2021 Warning: Unable to create personal MATLAB work folder:/home/yarkin/Documents/MATLAB For online documentation, see https://www.mathworks.com/support For product information, visit www.mathworks.com. >> loading datas ... ...reading surface file: rh.pial ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.06 sec) ...reading surface file: rh.pial-outer-smoothed ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.01 sec) preparing outer mesh structure ... face 5000 / 128500 face 10000 / 128500 face 15000 / 128500 face 20000 / 128500 face 25000 / 128500 face 30000 / 128500 face 35000 / 128500 face 40000 / 128500 face 45000 / 128500 face 50000 / 128500 face 55000 / 128500 face 60000 / 128500 face 65000 / 128500 face 70000 / 128500 face 75000 / 128500 face 80000 / 128500 face 85000 / 128500 face 90000 / 128500 face 95000 / 128500 face 100000 / 128500 face 105000 / 128500 face 110000 / 128500 face 115000 / 128500 face 120000 / 128500 face 125000 / 128500 mesh_outer = struct with fields: vertices: [64252x3 double] faces: [128500x3 double] facesOfVertex: [64252x1 struct] preparing pial mesh structure ... ...searching for mesh edges...done (65.55 sec). ... creating path file for vertex 1 / 64252 area file for outer ROIs saved at 1 ... creating path file for vertex 101 / 64252 ... creating path file for vertex 201 / 64252 ... creating path file for vertex 301 / 64252 ... creating path file for vertex 401 / 64252 ... creating path file for vertex 501 / 64252 ... creating path file for vertex 601 / 64252 ... creating path file for vertex 701 / 64252 ... creating path file for vertex 801 / 64252 ... creating path file for vertex 901 / 64252 ... creating path file for vertex 1001 / 64252 ... creating path file for vertex 1101 / 64252 ... creating path file for vertex 1201 / 64252 non geodesic regions removed from the patch ... creating path file for vertex 1301 / 64252 ... creating path file for vertex 1401 / 64252 ... creating path file for vertex 1501 / 64252 ... creating path file for vertex 1601 / 64252 ... creating path file for vertex 1701 / 64252 ... creating path file for vertex 1801 / 64252 ... creating path file for vertex 1901 / 64252 ... creating path file for vertex 2001 / 64252 ... creating path file for vertex 2101 / 64252 ... creating path file for vertex 2201 / 64252 ... creating path file for vertex 2301 / 64252 ... creating path file for vertex 2401 / 64252 ... creating path file for vertex 2501 / 64252 ... creating path file for vertex 2601 / 64252 ... creating path file for vertex 2701 / 64252 ... creating path file for vertex 2801 / 64252 ... creating path file for vertex 2901 / 64252 ... creating path file for vertex 3001 / 64252 ... creating path file for vertex 3101 / 64252 ... creating path file for vertex 3201 / 64252 ... creating path file for vertex 3301 / 64252 ... creating path file for vertex 3401 / 64252 ... creating path file for vertex 3501 / 64252 ... creating path file for vertex 3601 / 64252 ... creating path file for vertex 3701 / 64252 ... creating path file for vertex 3801 / 64252 ... creating path file for vertex 3901 / 64252 ... creating path file for vertex 4001 / 64252 ... creating path file for vertex 4101 / 64252 ... creating path file for vertex 4201 / 64252 ... creating path file for vertex 4301 / 64252 ... creating path file for vertex 4401 / 64252 ... creating path file for vertex 4501 / 64252 ... creating path file for vertex 4601 / 64252 ... creating path file for vertex 4701 / 64252 ... creating path file for vertex 4801 / 64252 ... creating path file for vertex 4901 / 64252 ... creating path file for vertex 5001 / 64252 area file for outer ROIs saved at 5001 ... creating path file for vertex 5101 / 64252 ... creating path file for vertex 5201 / 64252 ... creating path file for vertex 5301 / 64252 ... creating path file for vertex 5401 / 64252 ... creating path file for vertex 5501 / 64252 ... creating path file for vertex 5601 / 64252 ... creating path file for vertex 5701 / 64252 ... creating path file for vertex 5801 / 64252 ... creating path file for vertex 5901 / 64252 ... creating path file for vertex 6001 / 64252 ... creating path file for vertex 6101 / 64252 ... creating path file for vertex 6201 / 64252 ... creating path file for vertex 6301 / 64252 ... creating path file for vertex 6401 / 64252 ... creating path file for vertex 6501 / 64252 ... creating path file for vertex 6601 / 64252 ... creating path file for vertex 6701 / 64252 ... creating path file for vertex 6801 / 64252 ... creating path file for vertex 6901 / 64252 ... creating path file for vertex 7001 / 64252 ... creating path file for vertex 7101 / 64252 ... creating path file for vertex 7201 / 64252 ... creating path file for vertex 7301 / 64252 ... creating path file for vertex 7401 / 64252 ... creating path file for vertex 7501 / 64252 ... creating path file for vertex 7601 / 64252 ... creating path file for vertex 7701 / 64252 ... creating path file for vertex 7801 / 64252 ... creating path file for vertex 7901 / 64252 ... creating path file for vertex 8001 / 64252 ... creating path file for vertex 8101 / 64252 ... creating path file for vertex 8201 / 64252 ... creating path file for vertex 8301 / 64252 ... creating path file for vertex 8401 / 64252 ... creating path file for vertex 8501 / 64252 ... creating path file for vertex 8601 / 64252 ... creating path file for vertex 8701 / 64252 ... creating path file for vertex 8801 / 64252 ... creating path file for vertex 8901 / 64252 ... creating path file for vertex 9001 / 64252 ... creating path file for vertex 9101 / 64252 ... creating path file for vertex 9201 / 64252 ... creating path file for vertex 9301 / 64252 ... creating path file for vertex 9401 / 64252 ... creating path file for vertex 9501 / 64252 ... creating path file for vertex 9601 / 64252 ... creating path file for vertex 9701 / 64252 ... creating path file for vertex 9801 / 64252 ... creating path file for vertex 9901 / 64252 ... creating path file for vertex 10001 / 64252 area file for outer ROIs saved at 10001 ... creating path file for vertex 10101 / 64252 ... creating path file for vertex 10201 / 64252 ... creating path file for vertex 10301 / 64252 ... creating path file for vertex 10401 / 64252 ... creating path file for vertex 10501 / 64252 ... creating path file for vertex 10601 / 64252 ... creating path file for vertex 10701 / 64252 ... creating path file for vertex 10801 / 64252 ... creating path file for vertex 10901 / 64252 ... creating path file for vertex 11001 / 64252 ... creating path file for vertex 11101 / 64252 ... creating path file for vertex 11201 / 64252 ... creating path file for vertex 11301 / 64252 ... creating path file for vertex 11401 / 64252 ... creating path file for vertex 11501 / 64252 ... creating path file for vertex 11601 / 64252 ... creating path file for vertex 11701 / 64252 ... creating path file for vertex 11801 / 64252 ... creating path file for vertex 11901 / 64252 ... creating path file for vertex 12001 / 64252 ... creating path file for vertex 12101 / 64252 ... creating path file for vertex 12201 / 64252 ... creating path file for vertex 12301 / 64252 ... creating path file for vertex 12401 / 64252 ... creating path file for vertex 12501 / 64252 ... creating path file for vertex 12601 / 64252 ... creating path file for vertex 12701 / 64252 ... creating path file for vertex 12801 / 64252 ... creating path file for vertex 12901 / 64252 ... creating path file for vertex 13001 / 64252 ... creating path file for vertex 13101 / 64252 ... creating path file for vertex 13201 / 64252 ... creating path file for vertex 13301 / 64252 ... creating path file for vertex 13401 / 64252 ... creating path file for vertex 13501 / 64252 ... creating path file for vertex 13601 / 64252 ... creating path file for vertex 13701 / 64252 ... creating path file for vertex 13801 / 64252 ... creating path file for vertex 13901 / 64252 ... creating path file for vertex 14001 / 64252 ... creating path file for vertex 14101 / 64252 ... creating path file for vertex 14201 / 64252 ... creating path file for vertex 14301 / 64252 ... creating path file for vertex 14401 / 64252 ... creating path file for vertex 14501 / 64252 ... creating path file for vertex 14601 / 64252 ... creating path file for vertex 14701 / 64252 ... creating path file for vertex 14801 / 64252 ... creating path file for vertex 14901 / 64252 ... creating path file for vertex 15001 / 64252 area file for outer ROIs saved at 15001 ... creating path file for vertex 15101 / 64252 ... creating path file for vertex 15201 / 64252 ... creating path file for vertex 15301 / 64252 ... creating path file for vertex 15401 / 64252 ... creating path file for vertex 15501 / 64252 ... creating path file for vertex 15601 / 64252 ... creating path file for vertex 15701 / 64252 ... creating path file for vertex 15801 / 64252 ... creating path file for vertex 15901 / 64252 ... creating path file for vertex 16001 / 64252 ... creating path file for vertex 16101 / 64252 ... creating path file for vertex 16201 / 64252 ... creating path file for vertex 16301 / 64252 ... creating path file for vertex 16401 / 64252 ... creating path file for vertex 16501 / 64252 ... creating path file for vertex 16601 / 64252 ... creating path file for vertex 16701 / 64252 ... creating path file for vertex 16801 / 64252 ... creating path file for vertex 16901 / 64252 ... creating path file for vertex 17001 / 64252 ... creating path file for vertex 17101 / 64252 ... creating path file for vertex 17201 / 64252 ... creating path file for vertex 17301 / 64252 ... creating path file for vertex 17401 / 64252 ... creating path file for vertex 17501 / 64252 ... creating path file for vertex 17601 / 64252 ... creating path file for vertex 17701 / 64252 ... creating path file for vertex 17801 / 64252 ... creating path file for vertex 17901 / 64252 ... creating path file for vertex 18001 / 64252 ... creating path file for vertex 18101 / 64252 ... creating path file for vertex 18201 / 64252 ... creating path file for vertex 18301 / 64252 ... creating path file for vertex 18401 / 64252 ... creating path file for vertex 18501 / 64252 ... creating path file for vertex 18601 / 64252 ... creating path file for vertex 18701 / 64252 ... creating path file for vertex 18801 / 64252 ... creating path file for vertex 18901 / 64252 ... creating path file for vertex 19001 / 64252 ... creating path file for vertex 19101 / 64252 ... creating path file for vertex 19201 / 64252 ... creating path file for vertex 19301 / 64252 ... creating path file for vertex 19401 / 64252 ... creating path file for vertex 19501 / 64252 ... creating path file for vertex 19601 / 64252 ... creating path file for vertex 19701 / 64252 ... creating path file for vertex 19801 / 64252 ... creating path file for vertex 19901 / 64252 ... creating path file for vertex 20001 / 64252 area file for outer ROIs saved at 20001 ... creating path file for vertex 20101 / 64252 ... creating path file for vertex 20201 / 64252 ... creating path file for vertex 20301 / 64252 ... creating path file for vertex 20401 / 64252 ... creating path file for vertex 20501 / 64252 ... creating path file for vertex 20601 / 64252 ... creating path file for vertex 20701 / 64252 ... creating path file for vertex 20801 / 64252 ... creating path file for vertex 20901 / 64252 ... creating path file for vertex 21001 / 64252 ... creating path file for vertex 21101 / 64252 ... creating path file for vertex 21201 / 64252 ... creating path file for vertex 21301 / 64252 ... creating path file for vertex 21401 / 64252 ... creating path file for vertex 21501 / 64252 ... creating path file for vertex 21601 / 64252 ... creating path file for vertex 21701 / 64252 ... creating path file for vertex 21801 / 64252 ... creating path file for vertex 21901 / 64252 ... creating path file for vertex 22001 / 64252 ... creating path file for vertex 22101 / 64252 ... creating path file for vertex 22201 / 64252 ... creating path file for vertex 22301 / 64252 ... creating path file for vertex 22401 / 64252 ... creating path file for vertex 22501 / 64252 ... creating path file for vertex 22601 / 64252 ... creating path file for vertex 22701 / 64252 ... creating path file for vertex 22801 / 64252 ... creating path file for vertex 22901 / 64252 ... creating path file for vertex 23001 / 64252 ... creating path file for vertex 23101 / 64252 ... creating path file for vertex 23201 / 64252 ... creating path file for vertex 23301 / 64252 ... creating path file for vertex 23401 / 64252 ... creating path file for vertex 23501 / 64252 ... creating path file for vertex 23601 / 64252 ... creating path file for vertex 23701 / 64252 ... creating path file for vertex 23801 / 64252 ... creating path file for vertex 23901 / 64252 ... creating path file for vertex 24001 / 64252 ... creating path file for vertex 24101 / 64252 ... creating path file for vertex 24201 / 64252 ... creating path file for vertex 24301 / 64252 ... creating path file for vertex 24401 / 64252 ... creating path file for vertex 24501 / 64252 ... creating path file for vertex 24601 / 64252 ... creating path file for vertex 24701 / 64252 ... creating path file for vertex 24801 / 64252 ... creating path file for vertex 24901 / 64252 ... creating path file for vertex 25001 / 64252 area file for outer ROIs saved at 25001 ... creating path file for vertex 25101 / 64252 ... creating path file for vertex 25201 / 64252 ... creating path file for vertex 25301 / 64252 ... creating path file for vertex 25401 / 64252 ... creating path file for vertex 25501 / 64252 ... creating path file for vertex 25601 / 64252 ... creating path file for vertex 25701 / 64252 ... creating path file for vertex 25801 / 64252 ... creating path file for vertex 25901 / 64252 ... creating path file for vertex 26001 / 64252 ... creating path file for vertex 26101 / 64252 ... creating path file for vertex 26201 / 64252 ... creating path file for vertex 26301 / 64252 ... creating path file for vertex 26401 / 64252 ... creating path file for vertex 26501 / 64252 ... creating path file for vertex 26601 / 64252 ... creating path file for vertex 26701 / 64252 ... creating path file for vertex 26801 / 64252 ... creating path file for vertex 26901 / 64252 ... creating path file for vertex 27001 / 64252 ... creating path file for vertex 27101 / 64252 ... creating path file for vertex 27201 / 64252 ... creating path file for vertex 27301 / 64252 ... creating path file for vertex 27401 / 64252 ... creating path file for vertex 27501 / 64252 ... creating path file for vertex 27601 / 64252 ... creating path file for vertex 27701 / 64252 ... creating path file for vertex 27801 / 64252 ... creating path file for vertex 27901 / 64252 ... creating path file for vertex 28001 / 64252 ... creating path file for vertex 28101 / 64252 ... creating path file for vertex 28201 / 64252 ... creating path file for vertex 28301 / 64252 ... creating path file for vertex 28401 / 64252 ... creating path file for vertex 28501 / 64252 ... creating path file for vertex 28601 / 64252 ... creating path file for vertex 28701 / 64252 ... creating path file for vertex 28801 / 64252 ... creating path file for vertex 28901 / 64252 ... creating path file for vertex 29001 / 64252 ... creating path file for vertex 29101 / 64252 ... creating path file for vertex 29201 / 64252 ... creating path file for vertex 29301 / 64252 ... creating path file for vertex 29401 / 64252 ... creating path file for vertex 29501 / 64252 ... creating path file for vertex 29601 / 64252 ... creating path file for vertex 29701 / 64252 ... creating path file for vertex 29801 / 64252 ... creating path file for vertex 29901 / 64252 ... creating path file for vertex 30001 / 64252 area file for outer ROIs saved at 30001 ... creating path file for vertex 30101 / 64252 ... creating path file for vertex 30201 / 64252 ... creating path file for vertex 30301 / 64252 ... creating path file for vertex 30401 / 64252 ... creating path file for vertex 30501 / 64252 ... creating path file for vertex 30601 / 64252 ... creating path file for vertex 30701 / 64252 ... creating path file for vertex 30801 / 64252 ... creating path file for vertex 30901 / 64252 ... creating path file for vertex 31001 / 64252 ... creating path file for vertex 31101 / 64252 ... creating path file for vertex 31201 / 64252 ... creating path file for vertex 31301 / 64252 ... creating path file for vertex 31401 / 64252 ... creating path file for vertex 31501 / 64252 ... creating path file for vertex 31601 / 64252 ... creating path file for vertex 31701 / 64252 ... creating path file for vertex 31801 / 64252 ... creating path file for vertex 31901 / 64252 ... creating path file for vertex 32001 / 64252 ... creating path file for vertex 32101 / 64252 ... creating path file for vertex 32201 / 64252 ... creating path file for vertex 32301 / 64252 ... creating path file for vertex 32401 / 64252 ... creating path file for vertex 32501 / 64252 ... creating path file for vertex 32601 / 64252 ... creating path file for vertex 32701 / 64252 ... creating path file for vertex 32801 / 64252 ... creating path file for vertex 32901 / 64252 ... creating path file for vertex 33001 / 64252 ... creating path file for vertex 33101 / 64252 ... creating path file for vertex 33201 / 64252 ... creating path file for vertex 33301 / 64252 ... creating path file for vertex 33401 / 64252 ... creating path file for vertex 33501 / 64252 ... creating path file for vertex 33601 / 64252 ... creating path file for vertex 33701 / 64252 ... creating path file for vertex 33801 / 64252 ... creating path file for vertex 33901 / 64252 ... creating path file for vertex 34001 / 64252 ... creating path file for vertex 34101 / 64252 ... creating path file for vertex 34201 / 64252 ... creating path file for vertex 34301 / 64252 ... creating path file for vertex 34401 / 64252 ... creating path file for vertex 34501 / 64252 ... creating path file for vertex 34601 / 64252 ... creating path file for vertex 34701 / 64252 ... creating path file for vertex 34801 / 64252 ... creating path file for vertex 34901 / 64252 ... creating path file for vertex 35001 / 64252 area file for outer ROIs saved at 35001 ... creating path file for vertex 35101 / 64252 ... creating path file for vertex 35201 / 64252 ... creating path file for vertex 35301 / 64252 ... creating path file for vertex 35401 / 64252 ... creating path file for vertex 35501 / 64252 ... creating path file for vertex 35601 / 64252 ... creating path file for vertex 35701 / 64252 ... creating path file for vertex 35801 / 64252 ... creating path file for vertex 35901 / 64252 ... creating path file for vertex 36001 / 64252 ... creating path file for vertex 36101 / 64252 ... creating path file for vertex 36201 / 64252 ... creating path file for vertex 36301 / 64252 ... creating path file for vertex 36401 / 64252 ... creating path file for vertex 36501 / 64252 ... creating path file for vertex 36601 / 64252 ... creating path file for vertex 36701 / 64252 ... creating path file for vertex 36801 / 64252 ... creating path file for vertex 36901 / 64252 ... creating path file for vertex 37001 / 64252 ... creating path file for vertex 37101 / 64252 ... creating path file for vertex 37201 / 64252 ... creating path file for vertex 37301 / 64252 ... creating path file for vertex 37401 / 64252 ... creating path file for vertex 37501 / 64252 ... creating path file for vertex 37601 / 64252 ... creating path file for vertex 37701 / 64252 ... creating path file for vertex 37801 / 64252 ... creating path file for vertex 37901 / 64252 ... creating path file for vertex 38001 / 64252 ... creating path file for vertex 38101 / 64252 ... creating path file for vertex 38201 / 64252 ... creating path file for vertex 38301 / 64252 ... creating path file for vertex 38401 / 64252 ... creating path file for vertex 38501 / 64252 ... creating path file for vertex 38601 / 64252 ... creating path file for vertex 38701 / 64252 ... creating path file for vertex 38801 / 64252 ... creating path file for vertex 38901 / 64252 non geodesic regions removed from the patch ... creating path file for vertex 39001 / 64252 ... creating path file for vertex 39101 / 64252 ... creating path file for vertex 39201 / 64252 ... creating path file for vertex 39301 / 64252 ... creating path file for vertex 39401 / 64252 ... creating path file for vertex 39501 / 64252 ... creating path file for vertex 39601 / 64252 ... creating path file for vertex 39701 / 64252 ... creating path file for vertex 39801 / 64252 ... creating path file for vertex 39901 / 64252 ... creating path file for vertex 40001 / 64252 area file for outer ROIs saved at 40001 ... creating path file for vertex 40101 / 64252 ... creating path file for vertex 40201 / 64252 ... creating path file for vertex 40301 / 64252 ... creating path file for vertex 40401 / 64252 ... creating path file for vertex 40501 / 64252 ... creating path file for vertex 40601 / 64252 ... creating path file for vertex 40701 / 64252 ... creating path file for vertex 40801 / 64252 ... creating path file for vertex 40901 / 64252 ... creating path file for vertex 41001 / 64252 ... creating path file for vertex 41101 / 64252 ... creating path file for vertex 41201 / 64252 ... creating path file for vertex 41301 / 64252 ... creating path file for vertex 41401 / 64252 ... creating path file for vertex 41501 / 64252 ... creating path file for vertex 41601 / 64252 ... creating path file for vertex 41701 / 64252 ... creating path file for vertex 41801 / 64252 ... creating path file for vertex 41901 / 64252 ... creating path file for vertex 42001 / 64252 ... creating path file for vertex 42101 / 64252 ... creating path file for vertex 42201 / 64252 ... creating path file for vertex 42301 / 64252 ... creating path file for vertex 42401 / 64252 ... creating path file for vertex 42501 / 64252 ... creating path file for vertex 42601 / 64252 ... creating path file for vertex 42701 / 64252 ... creating path file for vertex 42801 / 64252 ... creating path file for vertex 42901 / 64252 ... creating path file for vertex 43001 / 64252 ... creating path file for vertex 43101 / 64252 ... creating path file for vertex 43201 / 64252 ... creating path file for vertex 43301 / 64252 ... creating path file for vertex 43401 / 64252 ... creating path file for vertex 43501 / 64252 ... creating path file for vertex 43601 / 64252 ... creating path file for vertex 43701 / 64252 ... creating path file for vertex 43801 / 64252 non geodesic regions removed from the patch ... creating path file for vertex 43901 / 64252 ... creating path file for vertex 44001 / 64252 ... creating path file for vertex 44101 / 64252 ... creating path file for vertex 44201 / 64252 ... creating path file for vertex 44301 / 64252 ... creating path file for vertex 44401 / 64252 ... creating path file for vertex 44501 / 64252 ... creating path file for vertex 44601 / 64252 ... creating path file for vertex 44701 / 64252 ... creating path file for vertex 44801 / 64252 ... creating path file for vertex 44901 / 64252 ... creating path file for vertex 45001 / 64252 area file for outer ROIs saved at 45001 ... creating path file for vertex 45101 / 64252 ... creating path file for vertex 45201 / 64252 ... creating path file for vertex 45301 / 64252 ... creating path file for vertex 45401 / 64252 ... creating path file for vertex 45501 / 64252 ... creating path file for vertex 45601 / 64252 ... creating path file for vertex 45701 / 64252 ... creating path file for vertex 45801 / 64252 ... creating path file for vertex 45901 / 64252 ... creating path file for vertex 46001 / 64252 non geodesic regions removed from the patch ... creating path file for vertex 46101 / 64252 ... creating path file for vertex 46201 / 64252 ... creating path file for vertex 46301 / 64252 ... creating path file for vertex 46401 / 64252 ... creating path file for vertex 46501 / 64252 ... creating path file for vertex 46601 / 64252 ... creating path file for vertex 46701 / 64252 ... creating path file for vertex 46801 / 64252 ... creating path file for vertex 46901 / 64252 ... creating path file for vertex 47001 / 64252 ... creating path file for vertex 47101 / 64252 ... creating path file for vertex 47201 / 64252 ... creating path file for vertex 47301 / 64252 ... creating path file for vertex 47401 / 64252 ... creating path file for vertex 47501 / 64252 ... creating path file for vertex 47601 / 64252 ... creating path file for vertex 47701 / 64252 ... creating path file for vertex 47801 / 64252 ... creating path file for vertex 47901 / 64252 ... creating path file for vertex 48001 / 64252 ... creating path file for vertex 48101 / 64252 ... creating path file for vertex 48201 / 64252 ... creating path file for vertex 48301 / 64252 ... creating path file for vertex 48401 / 64252 ... creating path file for vertex 48501 / 64252 ... creating path file for vertex 48601 / 64252 ... creating path file for vertex 48701 / 64252 ... creating path file for vertex 48801 / 64252 ... creating path file for vertex 48901 / 64252 ... creating path file for vertex 49001 / 64252 ... creating path file for vertex 49101 / 64252 ... creating path file for vertex 49201 / 64252 ... creating path file for vertex 49301 / 64252 ... creating path file for vertex 49401 / 64252 ... creating path file for vertex 49501 / 64252 ... creating path file for vertex 49601 / 64252 ... creating path file for vertex 49701 / 64252 ... creating path file for vertex 49801 / 64252 ... creating path file for vertex 49901 / 64252 ... creating path file for vertex 50001 / 64252 area file for outer ROIs saved at 50001 ... creating path file for vertex 50101 / 64252 ... creating path file for vertex 50201 / 64252 ... creating path file for vertex 50301 / 64252 ... creating path file for vertex 50401 / 64252 ... creating path file for vertex 50501 / 64252 ... creating path file for vertex 50601 / 64252 ... creating path file for vertex 50701 / 64252 ... creating path file for vertex 50801 / 64252 ... creating path file for vertex 50901 / 64252 ... creating path file for vertex 51001 / 64252 ... creating path file for vertex 51101 / 64252 ... creating path file for vertex 51201 / 64252 ... creating path file for vertex 51301 / 64252 ... creating path file for vertex 51401 / 64252 ... creating path file for vertex 51501 / 64252 ... creating path file for vertex 51601 / 64252 ... creating path file for vertex 51701 / 64252 ... creating path file for vertex 51801 / 64252 ... creating path file for vertex 51901 / 64252 ... creating path file for vertex 52001 / 64252 ... creating path file for vertex 52101 / 64252 ... creating path file for vertex 52201 / 64252 ... creating path file for vertex 52301 / 64252 ... creating path file for vertex 52401 / 64252 ... creating path file for vertex 52501 / 64252 ... creating path file for vertex 52601 / 64252 ... creating path file for vertex 52701 / 64252 ... creating path file for vertex 52801 / 64252 ... creating path file for vertex 52901 / 64252 ... creating path file for vertex 53001 / 64252 ... creating path file for vertex 53101 / 64252 ... creating path file for vertex 53201 / 64252 ... creating path file for vertex 53301 / 64252 ... creating path file for vertex 53401 / 64252 ... creating path file for vertex 53501 / 64252 ... creating path file for vertex 53601 / 64252 ... creating path file for vertex 53701 / 64252 ... creating path file for vertex 53801 / 64252 ... creating path file for vertex 53901 / 64252 non geodesic regions removed from the patch ... creating path file for vertex 54001 / 64252 ... creating path file for vertex 54101 / 64252 ... creating path file for vertex 54201 / 64252 ... creating path file for vertex 54301 / 64252 ... creating path file for vertex 54401 / 64252 ... creating path file for vertex 54501 / 64252 ... creating path file for vertex 54601 / 64252 ... creating path file for vertex 54701 / 64252 ... creating path file for vertex 54801 / 64252 ... creating path file for vertex 54901 / 64252 ... creating path file for vertex 55001 / 64252 area file for outer ROIs saved at 55001 ... creating path file for vertex 55101 / 64252 ... creating path file for vertex 55201 / 64252 ... creating path file for vertex 55301 / 64252 ... creating path file for vertex 55401 / 64252 ... creating path file for vertex 55501 / 64252 ... creating path file for vertex 55601 / 64252 ... creating path file for vertex 55701 / 64252 ... creating path file for vertex 55801 / 64252 ... creating path file for vertex 55901 / 64252 ... creating path file for vertex 56001 / 64252 ... creating path file for vertex 56101 / 64252 ... creating path file for vertex 56201 / 64252 ... creating path file for vertex 56301 / 64252 ... creating path file for vertex 56401 / 64252 ... creating path file for vertex 56501 / 64252 ... creating path file for vertex 56601 / 64252 ... creating path file for vertex 56701 / 64252 ... creating path file for vertex 56801 / 64252 ... creating path file for vertex 56901 / 64252 ... creating path file for vertex 57001 / 64252 ... creating path file for vertex 57101 / 64252 ... creating path file for vertex 57201 / 64252 ... creating path file for vertex 57301 / 64252 ... creating path file for vertex 57401 / 64252 ... creating path file for vertex 57501 / 64252 ... creating path file for vertex 57601 / 64252 ... creating path file for vertex 57701 / 64252 ... creating path file for vertex 57801 / 64252 ... creating path file for vertex 57901 / 64252 ... creating path file for vertex 58001 / 64252 ... creating path file for vertex 58101 / 64252 ... creating path file for vertex 58201 / 64252 ... creating path file for vertex 58301 / 64252 ... creating path file for vertex 58401 / 64252 ... creating path file for vertex 58501 / 64252 ... creating path file for vertex 58601 / 64252 ... creating path file for vertex 58701 / 64252 ... creating path file for vertex 58801 / 64252 ... creating path file for vertex 58901 / 64252 ... creating path file for vertex 59001 / 64252 ... creating path file for vertex 59101 / 64252 ... creating path file for vertex 59201 / 64252 ... creating path file for vertex 59301 / 64252 ... creating path file for vertex 59401 / 64252 ... creating path file for vertex 59501 / 64252 ... creating path file for vertex 59601 / 64252 ... creating path file for vertex 59701 / 64252 ... creating path file for vertex 59801 / 64252 ... creating path file for vertex 59901 / 64252 ... creating path file for vertex 60001 / 64252 area file for outer ROIs saved at 60001 ... creating path file for vertex 60101 / 64252 ... creating path file for vertex 60201 / 64252 ... creating path file for vertex 60301 / 64252 ... creating path file for vertex 60401 / 64252 ... creating path file for vertex 60501 / 64252 ... creating path file for vertex 60601 / 64252 ... creating path file for vertex 60701 / 64252 ... creating path file for vertex 60801 / 64252 ... creating path file for vertex 60901 / 64252 ... creating path file for vertex 61001 / 64252 ... creating path file for vertex 61101 / 64252 ... creating path file for vertex 61201 / 64252 ... creating path file for vertex 61301 / 64252 ... creating path file for vertex 61401 / 64252 ... creating path file for vertex 61501 / 64252 ... creating path file for vertex 61601 / 64252 ... creating path file for vertex 61701 / 64252 ... creating path file for vertex 61801 / 64252 ... creating path file for vertex 61901 / 64252 ... creating path file for vertex 62001 / 64252 ... creating path file for vertex 62101 / 64252 ... creating path file for vertex 62201 / 64252 ... creating path file for vertex 62301 / 64252 ... creating path file for vertex 62401 / 64252 ... creating path file for vertex 62501 / 64252 ... creating path file for vertex 62601 / 64252 ... creating path file for vertex 62701 / 64252 ... creating path file for vertex 62801 / 64252 ... creating path file for vertex 62901 / 64252 ... creating path file for vertex 63001 / 64252 ... creating path file for vertex 63101 / 64252 ... creating path file for vertex 63201 / 64252 ... creating path file for vertex 63301 / 64252 ... creating path file for vertex 63401 / 64252 ... creating path file for vertex 63501 / 64252 ... creating path file for vertex 63601 / 64252 ... creating path file for vertex 63701 / 64252 ... creating path file for vertex 63801 / 64252 ... creating path file for vertex 63901 / 64252 ... creating path file for vertex 64001 / 64252 ... creating path file for vertex 64101 / 64252 ... creating path file for vertex 64201 / 64252 saving area file in matlab format... DONE. deltaT = 8.3646e+03 ================= mri_path2label --confillxfn rh.pial /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/mri_path2label.input ================= Reading rh.pial Connecting and filling vertices in path at fillseed 401 Finding path............................................................................................................................................................................................................................................ done Filling 401 nlabel 7752 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.000001.label Connecting and filling vertices in path at fillseed 111 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 111 nlabel 8288 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.000101.label Connecting and filling vertices in path at fillseed 66 Finding path............................................................................................................................................................................................................................................................................................ done Filling 66 nlabel 10431 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.000201.label Connecting and filling vertices in path at fillseed 19 Finding path.......................................................................................................................................................... done Filling 19 nlabel 5595 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.000301.label Connecting and filling vertices in path at fillseed 647 Finding path............................................................................................................................................................................................................................................................................................................................................................... done Filling 647 nlabel 10618 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.000401.label Connecting and filling vertices in path at fillseed 613 Finding path.................................................................................................................................................................................................................................................................................................................................... done Filling 613 nlabel 9691 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.000501.label Connecting and filling vertices in path at fillseed 485 Finding path................................................................................................................................ done Filling 485 nlabel 5810 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.000601.label Connecting and filling vertices in path at fillseed 1245 Finding path.............................................................................................................................................................................................................................................................................................................................................................. done Filling 1245 nlabel 8532 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.000701.label Connecting and filling vertices in path at fillseed 1034 Finding path............................................................................................................................................................................................................................................................................................................................................................ done Filling 1034 nlabel 10299 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.000801.label Connecting and filling vertices in path at fillseed 561 Finding path............................................................................................................................................................................................................................................................................................................................................................. done Filling 561 nlabel 10071 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.000901.label Connecting and filling vertices in path at fillseed 523 Finding path...................................................................................................... done Filling 523 nlabel 5209 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.001001.label Connecting and filling vertices in path at fillseed 433 Finding path........................................................................................................................................................... done Filling 433 nlabel 6016 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.001101.label Connecting and filling vertices in path at fillseed 1814 Finding path.................................................................................................................................................................................................................................................................................. done Filling 1814 nlabel 8711 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.001201.label Connecting and filling vertices in path at fillseed 1368 Finding path................................................................................................................................................................................................................................. done Filling 1368 nlabel 7646 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.001301.label Connecting and filling vertices in path at fillseed 961 Finding path............................................................................................................................................................................................................................................................................................ done Filling 961 nlabel 10521 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.001401.label Connecting and filling vertices in path at fillseed 425 Finding path........................................................................................................................................................... done Filling 425 nlabel 5868 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.001501.label Connecting and filling vertices in path at fillseed 2514 Finding path.............................................................................................................................................................................................................................................................................................................................................. done Filling 2514 nlabel 8151 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.001601.label Connecting and filling vertices in path at fillseed 1997 Finding path.............................................................................................................................................................................................................................. done Filling 1997 nlabel 7528 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.001701.label Connecting and filling vertices in path at fillseed 1549 Finding path...................................................................................................................................................................................................................................................................................................................................... done Filling 1549 nlabel 10450 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.001801.label Connecting and filling vertices in path at fillseed 2231 Finding path............................................................................................................................................................................................................................................................................................................................................... done Filling 2231 nlabel 9789 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.001901.label Connecting and filling vertices in path at fillseed 1663 Finding path........................................................................................................................................................................................................................................................................................................................................ done Filling 1663 nlabel 10053 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.002001.label Connecting and filling vertices in path at fillseed 3204 Finding path......................................................................................................................................................................................................................................................................................................................................................................... done Filling 3204 nlabel 8945 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.002101.label Connecting and filling vertices in path at fillseed 2753 Finding path........................................................................................................................................................................................................................... done Filling 2753 nlabel 6678 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.002201.label Connecting and filling vertices in path at fillseed 2875 Finding path................................................................................................................................. done Filling 2875 nlabel 4662 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.002301.label Connecting and filling vertices in path at fillseed 1617 Finding path........................................................................................................................................................................................................................................................................................................ done Filling 1617 nlabel 9323 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.002401.label Connecting and filling vertices in path at fillseed 3957 Finding path...................................................................................................................................................................................................................................................................................................................................................................... done Filling 3957 nlabel 8664 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.002501.label Connecting and filling vertices in path at fillseed 4362 Finding path.................................................................................................................................................................................... done Filling 4362 nlabel 6102 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.002601.label Connecting and filling vertices in path at fillseed 3652 Finding path....................................................................................................................................................................................................................................................................................................................................... done Filling 3652 nlabel 10686 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.002701.label Connecting and filling vertices in path at fillseed 2140 Finding path.................................................................................................... done Filling 2140 nlabel 5430 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.002801.label Connecting and filling vertices in path at fillseed 4906 Finding path..................................................................................................................................................................................................................................................................................... done Filling 4906 nlabel 7691 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.002901.label Connecting and filling vertices in path at fillseed 5186 Finding path....................................................................................................................................................................................................................................... done Filling 5186 nlabel 7015 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.003001.label Connecting and filling vertices in path at fillseed 4522 Finding path............................................................................................................................................................................................................................................................................................................................................................................... done Filling 4522 nlabel 10270 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.003101.label Connecting and filling vertices in path at fillseed 4485 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 4485 nlabel 10527 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.003201.label Connecting and filling vertices in path at fillseed 3716 Finding path.............................................................................................................................................................................................................................................................................................. done Filling 3716 nlabel 9570 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.003301.label Connecting and filling vertices in path at fillseed 6735 Finding path............................................................................................................................................................................................................................................................................................................................................................................... done Filling 6735 nlabel 8430 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.003401.label Connecting and filling vertices in path at fillseed 5184 Finding path........................................................................................................................................................................................................................................... done Filling 5184 nlabel 7445 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.003501.label Connecting and filling vertices in path at fillseed 6434 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 6434 nlabel 8772 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.003601.label Connecting and filling vertices in path at fillseed 3542 Finding path......................................................................................................... done Filling 3542 nlabel 5513 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.003701.label Connecting and filling vertices in path at fillseed 3858 Finding path................................................................................................................................................................................................................................................................................................... done Filling 3858 nlabel 8439 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.003801.label Connecting and filling vertices in path at fillseed 6061 Finding path............................................................................................................................................................................................................................................................................................................................................................ done Filling 6061 nlabel 7527 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.003901.label Connecting and filling vertices in path at fillseed 6506 Finding path............................................................................................................................................................................................................................................................................................................................... done Filling 6506 nlabel 7210 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.004001.label Connecting and filling vertices in path at fillseed 4457 Finding path.......................................................................................................................................................... done Filling 4457 nlabel 4801 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.004101.label Connecting and filling vertices in path at fillseed 8519 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 8519 nlabel 10308 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.004201.label Connecting and filling vertices in path at fillseed 4125 Finding path........................................................................................................................................................................................................................................................................................................................ done Filling 4125 nlabel 8204 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.004301.label Connecting and filling vertices in path at fillseed 8012 Finding path..................................................................................................................................................................................................................................................................................................................................................... done Filling 8012 nlabel 8100 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.004401.label Connecting and filling vertices in path at fillseed 8552 Finding path.............................................................................................................................................................................................................................................................................................................................. done Filling 8552 nlabel 7575 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.004501.label Connecting and filling vertices in path at fillseed 6382 Finding path............................................................................................................................... done Filling 6382 nlabel 4730 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.004601.label Connecting and filling vertices in path at fillseed 7610 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 7610 nlabel 10244 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.004701.label Connecting and filling vertices in path at fillseed 7883 Finding path................................................................................................................................................................................................................................................................................................................................................................. done Filling 7883 nlabel 8548 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.004801.label Connecting and filling vertices in path at fillseed 10323 Finding path....................................................................................................................................................................................................................................................................... done Filling 10323 nlabel 6137 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.004901.label Connecting and filling vertices in path at fillseed 9484 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 9484 nlabel 8395 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.005001.label Connecting and filling vertices in path at fillseed 7443 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 7443 nlabel 8952 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.005101.label Connecting and filling vertices in path at fillseed 6834 Finding path.......................................................................................................................................................................................................................................................................................... done Filling 6834 nlabel 9117 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.005201.label Connecting and filling vertices in path at fillseed 9711 Finding path...................................................................................................................................................................................................................................................................................................................................................................... done Filling 9711 nlabel 8450 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.005301.label Connecting and filling vertices in path at fillseed 10624 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 10624 nlabel 8648 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.005401.label Connecting and filling vertices in path at fillseed 9482 Finding path................................................................................................................................................................................................................................................................................................................................................................................ done Filling 9482 nlabel 7953 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.005501.label Connecting and filling vertices in path at fillseed 7454 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 7454 nlabel 9664 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.005601.label Connecting and filling vertices in path at fillseed 8782 Finding path........................................................................................................................................................................................................................................................................................................................................................... done Filling 8782 nlabel 8608 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.005701.label Connecting and filling vertices in path at fillseed 10857 Finding path................................................................................................................................................................................................................................................................................................................................................ done Filling 10857 nlabel 8756 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.005801.label Connecting and filling vertices in path at fillseed 9647 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 9647 nlabel 9809 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.005901.label Connecting and filling vertices in path at fillseed 9433 Finding path........................................................................................................................................................................................ done Filling 9433 nlabel 5247 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.006001.label Connecting and filling vertices in path at fillseed 10701 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 10701 nlabel 9576 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.006101.label Connecting and filling vertices in path at fillseed 12235 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 12235 nlabel 6414 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.006201.label Connecting and filling vertices in path at fillseed 12636 Finding path......................................................................................................................................................................................................................................................................................................................................................................... done Filling 12636 nlabel 10246 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.006301.label Connecting and filling vertices in path at fillseed 10532 Finding path.............................................................................................................................................................................................................................................................................................................................. done Filling 10532 nlabel 7607 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.006401.label Connecting and filling vertices in path at fillseed 10759 Finding path................................................................................................................................................................................................................................................................................................................................................................. done Filling 10759 nlabel 9376 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.006501.label Connecting and filling vertices in path at fillseed 12233 Finding path................................................................................................................................................................................................................................................................... done Filling 12233 nlabel 7119 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.006601.label Connecting and filling vertices in path at fillseed 11513 Finding path................................................................................................................................................................................................................................................... done Filling 11513 nlabel 5924 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.006701.label Connecting and filling vertices in path at fillseed 9447 Finding path............................................................................................................................................................................................................................................ done Filling 9447 nlabel 6342 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.006801.label Connecting and filling vertices in path at fillseed 11847 Finding path............................................................................................................................................................................................................................................................................................................................................. done Filling 11847 nlabel 9483 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.006901.label Connecting and filling vertices in path at fillseed 13222 Finding path........................................................................................................................................................................................................................................................ done Filling 13222 nlabel 6562 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.007001.label Connecting and filling vertices in path at fillseed 13560 Finding path............................................................................................................................................................................................................................................................................................................. done Filling 13560 nlabel 9884 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.007101.label Connecting and filling vertices in path at fillseed 14451 Finding path...................................................................................................................................................................................................................................................... done Filling 14451 nlabel 5944 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.007201.label Connecting and filling vertices in path at fillseed 118793 Finding path............................................................................................................................................................................................................................................................................................................................................................... done Filling 118793 nlabel 9205 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.007301.label Connecting and filling vertices in path at fillseed 15155 Finding path................................................................................................................................................................................................................................................... done Filling 15155 nlabel 6429 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.007401.label Connecting and filling vertices in path at fillseed 12704 Finding path................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 12704 nlabel 10298 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.007501.label Connecting and filling vertices in path at fillseed 16444 Finding path...................................................................................................................................................................................................................................................................................................................................................... done Filling 16444 nlabel 8247 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.007601.label Connecting and filling vertices in path at fillseed 118314 Finding path............................................................................................................................................................................................................................................................................................................................................ done Filling 118314 nlabel 6968 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.007701.label Connecting and filling vertices in path at fillseed 15154 Finding path...................................................................................................................................................................................................................... done Filling 15154 nlabel 6274 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.007801.label Connecting and filling vertices in path at fillseed 14597 Finding path............................................................................................................................................................................................................................................................................................................................. done Filling 14597 nlabel 10378 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.007901.label Connecting and filling vertices in path at fillseed 12560 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 12560 nlabel 8219 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.008001.label Connecting and filling vertices in path at fillseed 13356 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 13356 nlabel 8683 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.008101.label Connecting and filling vertices in path at fillseed 16959 Finding path................................................................................................................................................................................................................................. done Filling 16959 nlabel 6231 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.008201.label Connecting and filling vertices in path at fillseed 118780 Finding path.................................................................................................................................................................................................................................................................................... done Filling 118780 nlabel 6523 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.008301.label Connecting and filling vertices in path at fillseed 117337 Finding path.......................................................................................................................................... done Filling 117337 nlabel 5684 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.008401.label Connecting and filling vertices in path at fillseed 15451 Finding path........................................................................................................................................................................................................................................................................................ done Filling 15451 nlabel 5534 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.008501.label Connecting and filling vertices in path at fillseed 15019 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 15019 nlabel 10313 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.008601.label Connecting and filling vertices in path at fillseed 15310 Finding path.......................................................................................................................................................................................................................................................................... done Filling 15310 nlabel 6828 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.008701.label Connecting and filling vertices in path at fillseed 15512 Finding path.................................................................................................................................................................................................................................................................................................................................................. done Filling 15512 nlabel 9260 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.008801.label Connecting and filling vertices in path at fillseed 15457 Finding path.................................................................................................................................................................................................................................................................................................................................................................................... done Filling 15457 nlabel 5154 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.008901.label Connecting and filling vertices in path at fillseed 14053 Finding path............................................................................................................................................................................................................................................................................................. done Filling 14053 nlabel 9411 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.009001.label Connecting and filling vertices in path at fillseed 17624 Finding path......................................................................................................................................................................................................................................................... done Filling 17624 nlabel 9189 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.009101.label Connecting and filling vertices in path at fillseed 7373 Finding path................................................................................................................................................................ done Filling 7373 nlabel 6161 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.009201.label Connecting and filling vertices in path at fillseed 17408 Finding path............................................................................................................................................................................................................................................................................................ done Filling 17408 nlabel 7115 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.009301.label Connecting and filling vertices in path at fillseed 118101 Finding path................................................................................................................................................................................................................................................................................................................................................................... done Filling 118101 nlabel 5980 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.009401.label Connecting and filling vertices in path at fillseed 19988 Finding path.............................................................................................................................................................................................................................. done Filling 19988 nlabel 6416 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.009501.label Connecting and filling vertices in path at fillseed 16365 Finding path............................................................................................................................................................................................................................................................... done Filling 16365 nlabel 6514 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.009601.label Connecting and filling vertices in path at fillseed 20387 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 20387 nlabel 10015 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.009701.label Connecting and filling vertices in path at fillseed 19352 Finding path...................................................................................................................................................................................................... done Filling 19352 nlabel 6319 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.009801.label Connecting and filling vertices in path at fillseed 17969 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 17969 nlabel 10767 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.009901.label Connecting and filling vertices in path at fillseed 19156 Finding path................................................................................................................................................................................................... done Filling 19156 nlabel 6720 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.010001.label Connecting and filling vertices in path at fillseed 18466 Finding path.......................................................................................................................................................................................................................................................................................................................................................... done Filling 18466 nlabel 10233 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.010101.label Connecting and filling vertices in path at fillseed 15424 Finding path...................................................................................................................................................................................................... done Filling 15424 nlabel 6533 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.010201.label Connecting and filling vertices in path at fillseed 17547 Finding path............................................................................................................................................................. done Filling 17547 nlabel 6584 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.010301.label Connecting and filling vertices in path at fillseed 24712 Finding path.................................................................................................................................................................................................................................................. done Filling 24712 nlabel 6197 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.010401.label Connecting and filling vertices in path at fillseed 20534 Finding path....................................................................................................................................................................................................................................................................................................................................... done Filling 20534 nlabel 9933 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.010501.label Connecting and filling vertices in path at fillseed 21367 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 21367 nlabel 9538 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.010601.label Connecting and filling vertices in path at fillseed 21339 Finding path........................................................................................................................................................................................ done Filling 21339 nlabel 6418 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.010701.label Connecting and filling vertices in path at fillseed 18177 Finding path............................................................................................................................................................................................................................................................................... done Filling 18177 nlabel 8301 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.010801.label Connecting and filling vertices in path at fillseed 17280 Finding path............................................................................................................................................................................................................................. done Filling 17280 nlabel 7380 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.010901.label Connecting and filling vertices in path at fillseed 19312 Finding path........................................................................................................................................................................................ done Filling 19312 nlabel 6806 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.011001.label Connecting and filling vertices in path at fillseed 118405 Finding path...................................................................................................................................................................................................................................................................................... done Filling 118405 nlabel 6051 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.011101.label Connecting and filling vertices in path at fillseed 21045 Finding path..................................................................................................................................................................................................................................................................................................... done Filling 21045 nlabel 8751 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.011201.label Connecting and filling vertices in path at fillseed 20618 Finding path........................................................................................................................................................................................................................................................................... done Filling 20618 nlabel 9075 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.011301.label Connecting and filling vertices in path at fillseed 21277 Finding path...................................................................................................................................................................................................................................... done Filling 21277 nlabel 7563 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.011401.label Connecting and filling vertices in path at fillseed 22259 Finding path..................................................................................................................................................................................................................................................... done Filling 22259 nlabel 6483 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.011501.label Connecting and filling vertices in path at fillseed 20638 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 20638 nlabel 9807 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.011601.label Connecting and filling vertices in path at fillseed 21121 Finding path.................................................................................................................................................................................................................................. done Filling 21121 nlabel 7094 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.011701.label Connecting and filling vertices in path at fillseed 17313 Finding path........................................................................................................................................................................................................................................................... done Filling 17313 nlabel 7261 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.011801.label Connecting and filling vertices in path at fillseed 22283 Finding path.................................................................................................................................................................................................................................................................................... done Filling 22283 nlabel 7069 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.011901.label Connecting and filling vertices in path at fillseed 22381 Finding path........................................................................................................................................................................................................................... done Filling 22381 nlabel 7683 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.012001.label Connecting and filling vertices in path at fillseed 23523 Finding path...................................................................................................................................................................................................................................................................................................... done Filling 23523 nlabel 7857 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.012101.label Connecting and filling vertices in path at fillseed 118198 Finding path................................................................................................................................................................................................................................................................................................ done Filling 118198 nlabel 7195 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.012201.label Connecting and filling vertices in path at fillseed 19318 Finding path.............................................................................................................................................................................................. done Filling 19318 nlabel 6135 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.012301.label Connecting and filling vertices in path at fillseed 23265 Finding path............................................................................................................................................................................................. done Filling 23265 nlabel 7585 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.012401.label Connecting and filling vertices in path at fillseed 23617 Finding path....................................................................................................................................................................................................................................................................................................................................... done Filling 23617 nlabel 5638 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.012501.label Connecting and filling vertices in path at fillseed 20204 Finding path............................................................................................................................................................................................................ done Filling 20204 nlabel 7162 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.012601.label Connecting and filling vertices in path at fillseed 25769 Finding path....................................................................................................................................................................................................................................................... done Filling 25769 nlabel 6577 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.012701.label Connecting and filling vertices in path at fillseed 22221 Finding path............................................................................................................................................................................................................................................................................................................... done Filling 22221 nlabel 6840 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.012801.label Connecting and filling vertices in path at fillseed 25648 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 25648 nlabel 7496 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.012901.label Connecting and filling vertices in path at fillseed 25587 Finding path............................................................................................................................................................................................................................................ done Filling 25587 nlabel 5924 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.013001.label Connecting and filling vertices in path at fillseed 32354 Finding path....................................................................................................................................................................................................................................................... done Filling 32354 nlabel 6634 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.013101.label Connecting and filling vertices in path at fillseed 30198 Finding path...................................................................................................................................................................................................................................................................................... done Filling 30198 nlabel 7112 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.013201.label Connecting and filling vertices in path at fillseed 29260 Finding path................................................................................................................................................................................................................................................................................. done Filling 29260 nlabel 6858 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.013301.label Connecting and filling vertices in path at fillseed 26634 Finding path........................................................................................................................................................................................................................................................................................ done Filling 26634 nlabel 6850 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.013401.label Connecting and filling vertices in path at fillseed 24993 Finding path....................................................................................................................................................................................................... done Filling 24993 nlabel 7156 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.013501.label Connecting and filling vertices in path at fillseed 24425 Finding path................................................................................................................................................................................................................................................................................. done Filling 24425 nlabel 8097 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.013601.label Connecting and filling vertices in path at fillseed 23049 Finding path.......................................................................................................................................................................................................................................................... done Filling 23049 nlabel 6771 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.013701.label Connecting and filling vertices in path at fillseed 29295 Finding path................................................................................................................................................................................................................................................................................................................. done Filling 29295 nlabel 6276 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.013801.label Connecting and filling vertices in path at fillseed 21285 Finding path................................................................................................................................................................................................................................................................................................................................ done Filling 21285 nlabel 6546 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.013901.label Connecting and filling vertices in path at fillseed 25260 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 25260 nlabel 7066 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.014001.label Connecting and filling vertices in path at fillseed 28667 Finding path................................................................................................................................................................................................................................................................................. done Filling 28667 nlabel 7516 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.014101.label Connecting and filling vertices in path at fillseed 31344 Finding path......................................................................................................................................................................................................................................................................................................................................................................... done Filling 31344 nlabel 5717 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.014201.label Connecting and filling vertices in path at fillseed 24103 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 24103 nlabel 10590 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.014301.label Connecting and filling vertices in path at fillseed 118466 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 118466 nlabel 6747 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.014401.label Connecting and filling vertices in path at fillseed 28379 Finding path................................................................................................................................................................................................. done Filling 28379 nlabel 6428 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.014501.label Connecting and filling vertices in path at fillseed 27223 Finding path....................................................................................................................................................................................................... done Filling 27223 nlabel 6321 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.014601.label Connecting and filling vertices in path at fillseed 25953 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 25953 nlabel 9268 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.014701.label Connecting and filling vertices in path at fillseed 30321 Finding path......................................................................................................................................................................................................................................................... done Filling 30321 nlabel 5554 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.014801.label Connecting and filling vertices in path at fillseed 30290 Finding path................................................................................................................................................................................................................................................................................. done Filling 30290 nlabel 6404 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.014901.label Connecting and filling vertices in path at fillseed 118971 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 118971 nlabel 7653 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.015001.label Connecting and filling vertices in path at fillseed 30893 Finding path.............................................................................................................................................................................................................................................................................................................. done Filling 30893 nlabel 7348 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.015101.label Connecting and filling vertices in path at fillseed 24808 Finding path.................................................................................................................................................................................................................... done Filling 24808 nlabel 6409 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.015201.label Connecting and filling vertices in path at fillseed 29410 Finding path......................................................................................................................................................................................................................................................................................................................................................... done Filling 29410 nlabel 8704 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.015301.label Connecting and filling vertices in path at fillseed 29343 Finding path...................................................................................................................................................................................................................................................................................................................................................................... done Filling 29343 nlabel 7605 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.015401.label Connecting and filling vertices in path at fillseed 28749 Finding path................................................................................................................................................................................................................................................................................................................................................................................... done Filling 28749 nlabel 7806 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.015501.label Connecting and filling vertices in path at fillseed 31812 Finding path........................................................................................................................................................................................................................................................................................................... done Filling 31812 nlabel 7846 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.015601.label Connecting and filling vertices in path at fillseed 33699 Finding path.............................................................................................................................................................................................................................................................................................................................................................................. done Filling 33699 nlabel 9549 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.015701.label Connecting and filling vertices in path at fillseed 29358 Finding path......................................................................................................................................................................................................................................................................................................................................................... done Filling 29358 nlabel 9225 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.015801.label Connecting and filling vertices in path at fillseed 28186 Finding path................................................................................................................................................................................................................................................................................................................................................ done Filling 28186 nlabel 6601 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.015901.label Connecting and filling vertices in path at fillseed 30922 Finding path.......................................................................................................................................................................................................................................................................................................... done Filling 30922 nlabel 6065 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.016001.label Connecting and filling vertices in path at fillseed 33330 Finding path...................................................................................................................................................................................................................................................................................... done Filling 33330 nlabel 6261 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.016101.label Connecting and filling vertices in path at fillseed 30375 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 30375 nlabel 9033 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.016201.label Connecting and filling vertices in path at fillseed 28163 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 28163 nlabel 6447 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.016301.label Connecting and filling vertices in path at fillseed 32029 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 32029 nlabel 8668 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.016401.label Connecting and filling vertices in path at fillseed 36182 Finding path.......................................................................................................................................................................................................................................................................... done Filling 36182 nlabel 6761 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.016501.label Connecting and filling vertices in path at fillseed 32561 Finding path........................................................................................................................................................................................................................................................................................................................................................... done Filling 32561 nlabel 8735 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.016601.label Connecting and filling vertices in path at fillseed 30240 Finding path................................................................................................................................................................................................................................................................................. done Filling 30240 nlabel 6565 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.016701.label Connecting and filling vertices in path at fillseed 31105 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 31105 nlabel 7348 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.016801.label Connecting and filling vertices in path at fillseed 34685 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 34685 nlabel 8900 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.016901.label Connecting and filling vertices in path at fillseed 34423 Finding path..................................................................................................................................................................................................................................................... done Filling 34423 nlabel 6166 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.017001.label Connecting and filling vertices in path at fillseed 30326 Finding path..................................................................................................................................................................................................................................................... done Filling 30326 nlabel 6759 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.017101.label Connecting and filling vertices in path at fillseed 33088 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 33088 nlabel 8388 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.017201.label Connecting and filling vertices in path at fillseed 36680 Finding path................................................................................................................................................................................... done Filling 36680 nlabel 6990 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.017301.label Connecting and filling vertices in path at fillseed 34543 Finding path.......................................................................................................................................................................................................................................................................................................................................................... done Filling 34543 nlabel 8621 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.017401.label Connecting and filling vertices in path at fillseed 31409 Finding path............................................................................................................................................................................................................................................................................................................................ done Filling 31409 nlabel 7823 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.017501.label Connecting and filling vertices in path at fillseed 33582 Finding path.......................................................................................................................................................................................................... done Filling 33582 nlabel 7790 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.017601.label Connecting and filling vertices in path at fillseed 32060 Finding path.............................................................................................................................................................................................................................................................. done Filling 32060 nlabel 6895 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.017701.label Connecting and filling vertices in path at fillseed 35561 Finding path................................................................................................................................................................................................................................................................................................................................................ done Filling 35561 nlabel 9080 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.017801.label Connecting and filling vertices in path at fillseed 34398 Finding path......................................................................................................................................................................................................................................................................................................................................... done Filling 34398 nlabel 6946 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.017901.label Connecting and filling vertices in path at fillseed 33582 Finding path....................................................................................................................................................................................................... done Filling 33582 nlabel 7649 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.018001.label Connecting and filling vertices in path at fillseed 33926 Finding path............................................................................................................................................................................................... done Filling 33926 nlabel 7465 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.018101.label Connecting and filling vertices in path at fillseed 40189 Finding path.................................................................................................................................................................................................................................... done Filling 40189 nlabel 4374 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.018201.label Connecting and filling vertices in path at fillseed 35398 Finding path......................................................................................................................................................................................................................................................................................................................................................................... done Filling 35398 nlabel 6593 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.018301.label Connecting and filling vertices in path at fillseed 33191 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 33191 nlabel 6462 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.018401.label Connecting and filling vertices in path at fillseed 33925 Finding path.......................................................................................................................................................................................................................................................................................................... done Filling 33925 nlabel 5485 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.018501.label Connecting and filling vertices in path at fillseed 119076 Finding path............................................................................................................................................................................................................................................... done Filling 119076 nlabel 6415 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.018601.label Connecting and filling vertices in path at fillseed 37426 Finding path......................................................................................................................................................................................................................................................................................................................................... done Filling 37426 nlabel 10341 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.018701.label Connecting and filling vertices in path at fillseed 36370 Finding path......................................................................................................................................................................................................................................................................................................................................... done Filling 36370 nlabel 6747 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.018801.label Connecting and filling vertices in path at fillseed 35163 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 35163 nlabel 6359 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.018901.label Connecting and filling vertices in path at fillseed 40682 Finding path..................................................................................................................................................................................................... done Filling 40682 nlabel 7352 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.019001.label Connecting and filling vertices in path at fillseed 119081 Finding path............................................................................................................................................................................................................................... done Filling 119081 nlabel 6270 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.019101.label Connecting and filling vertices in path at fillseed 37400 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 37400 nlabel 11096 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.019201.label Connecting and filling vertices in path at fillseed 38141 Finding path.................................................................................................................................................................................................................................................................................................................................. done Filling 38141 nlabel 5642 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.019301.label Connecting and filling vertices in path at fillseed 38050 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 38050 nlabel 8665 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.019401.label Connecting and filling vertices in path at fillseed 119156 Finding path............................................................................................................................................................................................................................................... done Filling 119156 nlabel 6894 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.019501.label Connecting and filling vertices in path at fillseed 36988 Finding path......................................................................................................................................................................................................................................................................................................... done Filling 36988 nlabel 6803 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.019601.label Connecting and filling vertices in path at fillseed 37384 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 37384 nlabel 11087 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.019701.label Connecting and filling vertices in path at fillseed 39226 Finding path...................................................................................................................................................................................................................................................................................................................................................................... done Filling 39226 nlabel 8407 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.019801.label Connecting and filling vertices in path at fillseed 38205 Finding path................................................................................................................................................................................................................................................... done Filling 38205 nlabel 6559 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.019901.label Connecting and filling vertices in path at fillseed 38374 Finding path........................................................................................................................................................................................................................................ done Filling 38374 nlabel 7598 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.020001.label Connecting and filling vertices in path at fillseed 41685 Finding path.................................................................................................................................................................................................................................................................................................................................................................. done Filling 41685 nlabel 8601 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.020101.label Connecting and filling vertices in path at fillseed 39496 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 39496 nlabel 9484 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.020201.label Connecting and filling vertices in path at fillseed 40252 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 40252 nlabel 10536 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.020301.label Connecting and filling vertices in path at fillseed 40054 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 40054 nlabel 8473 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.020401.label Connecting and filling vertices in path at fillseed 38321 Finding path............................................................................................................................................................................................................. done Filling 38321 nlabel 7537 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.020501.label Connecting and filling vertices in path at fillseed 42341 Finding path.............................................................................................................................................................................................. done Filling 42341 nlabel 4934 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.020601.label Connecting and filling vertices in path at fillseed 41397 Finding path............................................................................................................................................................................................................................................................................................................................................................................. done Filling 41397 nlabel 11734 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.020701.label Connecting and filling vertices in path at fillseed 39059 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 39059 nlabel 8712 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.020801.label Connecting and filling vertices in path at fillseed 39557 Finding path................................................................................................................................................................................................. done Filling 39557 nlabel 7572 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.020901.label Connecting and filling vertices in path at fillseed 42178 Finding path.............................................................................................................................................................................................................................................................. done Filling 42178 nlabel 5836 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.021001.label Connecting and filling vertices in path at fillseed 41424 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 41424 nlabel 10898 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.021101.label Connecting and filling vertices in path at fillseed 42392 Finding path....................................................................................................................................................................................................................................... done Filling 42392 nlabel 7171 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.021201.label Connecting and filling vertices in path at fillseed 39679 Finding path........................................................................................................................................................................ done Filling 39679 nlabel 7672 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.021301.label Connecting and filling vertices in path at fillseed 119197 Finding path............................................................................................................................................................................................................................................................................................................ done Filling 119197 nlabel 5723 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.021401.label Connecting and filling vertices in path at fillseed 42476 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 42476 nlabel 11346 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.021501.label Connecting and filling vertices in path at fillseed 42389 Finding path................................................................................................................................................................................................................................................ done Filling 42389 nlabel 7912 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.021601.label Connecting and filling vertices in path at fillseed 41666 Finding path............................................................................................................................................................................................................... done Filling 41666 nlabel 7138 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.021701.label Connecting and filling vertices in path at fillseed 41901 Finding path................................................................................................................................................................................................................................................................................................................. done Filling 41901 nlabel 6818 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.021801.label Connecting and filling vertices in path at fillseed 43450 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 43450 nlabel 11255 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.021901.label Connecting and filling vertices in path at fillseed 41238 Finding path................................................................................................................................................................................................................................................................................................................................................................. done Filling 41238 nlabel 8530 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.022001.label Connecting and filling vertices in path at fillseed 42633 Finding path............................................................................................................................................................................................................. done Filling 42633 nlabel 8173 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.022101.label Connecting and filling vertices in path at fillseed 42912 Finding path................................................................................................................................................................................................................................................. done Filling 42912 nlabel 6516 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.022201.label Connecting and filling vertices in path at fillseed 48081 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 48081 nlabel 9502 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.022301.label Connecting and filling vertices in path at fillseed 43382 Finding path..................................................................................................................................................................................................................................................................................................................... done Filling 43382 nlabel 7706 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.022401.label Connecting and filling vertices in path at fillseed 41957 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 41957 nlabel 9131 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.022501.label Connecting and filling vertices in path at fillseed 42841 Finding path............................................................................................................................................................................................................. done Filling 42841 nlabel 5523 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.022601.label Connecting and filling vertices in path at fillseed 44235 Finding path........................................................................................................................................................................................................ done Filling 44235 nlabel 5236 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.022701.label Connecting and filling vertices in path at fillseed 45239 Finding path............................................................................................................................... done Filling 45239 nlabel 5128 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.022801.label Connecting and filling vertices in path at fillseed 44355 Finding path........................................................................................................................................................................................................................................................................ done Filling 44355 nlabel 6600 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.022901.label Connecting and filling vertices in path at fillseed 46659 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 46659 nlabel 8744 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.023001.label Connecting and filling vertices in path at fillseed 44589 Finding path.................................................................................................................................................................................................................................................................................................................................................... done Filling 44589 nlabel 8134 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.023101.label Connecting and filling vertices in path at fillseed 44251 Finding path.............................................................................................................................................................................. done Filling 44251 nlabel 4978 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.023201.label Connecting and filling vertices in path at fillseed 45219 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 45219 nlabel 5564 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.023301.label Connecting and filling vertices in path at fillseed 43990 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 43990 nlabel 9071 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.023401.label Connecting and filling vertices in path at fillseed 42900 Finding path................................................................................................................................................................................................................................................................................................................................ done Filling 42900 nlabel 6577 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.023501.label Connecting and filling vertices in path at fillseed 49035 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 49035 nlabel 9707 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.023601.label Connecting and filling vertices in path at fillseed 45260 Finding path...................................................................................................................................................................... done Filling 45260 nlabel 3819 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.023701.label Connecting and filling vertices in path at fillseed 44369 Finding path................................................................................................................................................................................................................................... done Filling 44369 nlabel 7729 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.023801.label Connecting and filling vertices in path at fillseed 47181 Finding path...................................................................................................................................................................................................... done Filling 47181 nlabel 6786 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.023901.label Connecting and filling vertices in path at fillseed 50014 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 50014 nlabel 8715 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.024001.label Connecting and filling vertices in path at fillseed 47854 Finding path............................................................................................................................................................................................................................. done Filling 47854 nlabel 4834 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.024101.label Connecting and filling vertices in path at fillseed 45288 Finding path...................................................................................................................................................................................................................................................................................... done Filling 45288 nlabel 8623 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.024201.label Connecting and filling vertices in path at fillseed 47607 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 47607 nlabel 9135 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.024301.label Connecting and filling vertices in path at fillseed 43864 Finding path......................................................................................................................................................................................................................................... done Filling 43864 nlabel 6410 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.024401.label Connecting and filling vertices in path at fillseed 45978 Finding path..................................................................................................................................................................................................................................................................................................................................................................... done Filling 45978 nlabel 5831 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.024501.label Connecting and filling vertices in path at fillseed 47889 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 47889 nlabel 7717 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.024601.label Connecting and filling vertices in path at fillseed 49777 Finding path........................................................................................................................................................................................................................................................................................... done Filling 49777 nlabel 7739 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.024701.label Connecting and filling vertices in path at fillseed 50442 Finding path................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 50442 nlabel 8256 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.024801.label Connecting and filling vertices in path at fillseed 46461 Finding path............................................................................................................................................................................................................................................................................................ done Filling 46461 nlabel 7283 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.024901.label Connecting and filling vertices in path at fillseed 49706 Finding path.................................................................................................................................................................................................................................................................................................... done Filling 49706 nlabel 5912 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.025001.label Connecting and filling vertices in path at fillseed 48775 Finding path.......................................................................................................................................................................................................................................................................................................................................................... done Filling 48775 nlabel 7881 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.025101.label Connecting and filling vertices in path at fillseed 46784 Finding path..................................................................................................................................................................................................................................................................................................................................................... done Filling 46784 nlabel 9326 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.025201.label Connecting and filling vertices in path at fillseed 50401 Finding path................................................................................................................................................................................................................................................................................................................................................................................ done Filling 50401 nlabel 8277 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.025301.label Connecting and filling vertices in path at fillseed 43932 Finding path............................................................................................................................................................................................................................................................................................................................ done Filling 43932 nlabel 7085 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.025401.label Connecting and filling vertices in path at fillseed 48898 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 48898 nlabel 9734 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.025501.label Connecting and filling vertices in path at fillseed 51473 Finding path.......................................................................................................................................................................................................................................................... done Filling 51473 nlabel 7807 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.025601.label Connecting and filling vertices in path at fillseed 50143 Finding path............................................................................................................................................................................................ done Filling 50143 nlabel 6575 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.025701.label Connecting and filling vertices in path at fillseed 45724 Finding path...................................................................................................................................................................................................................................................................................................... done Filling 45724 nlabel 7056 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.025801.label Connecting and filling vertices in path at fillseed 44849 Finding path.......................................................................................................................................................................................................................................................................................................... done Filling 44849 nlabel 6983 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.025901.label Connecting and filling vertices in path at fillseed 119500 Finding path.................................................................................................................................................................................................................................................. done Filling 119500 nlabel 5149 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.026001.label Connecting and filling vertices in path at fillseed 53247 Finding path........................................................................................................................................................................................................................................................................................ done Filling 53247 nlabel 8680 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.026101.label Connecting and filling vertices in path at fillseed 49514 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 49514 nlabel 8776 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.026201.label Connecting and filling vertices in path at fillseed 49251 Finding path....................................................................................................................................................................................................................................................................................................................................................... done Filling 49251 nlabel 7607 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.026301.label Connecting and filling vertices in path at fillseed 43943 Finding path..................................................................................................................................................................................................................................................................................................................... done Filling 43943 nlabel 6603 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.026401.label Connecting and filling vertices in path at fillseed 55179 Finding path............................................................................................................................................................................................................................................................................................................................................................................ done Filling 55179 nlabel 5506 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.026501.label Connecting and filling vertices in path at fillseed 52319 Finding path................................................................................................................................................................................................................................................................................ done Filling 52319 nlabel 7687 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.026601.label Connecting and filling vertices in path at fillseed 51996 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 51996 nlabel 8735 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.026701.label Connecting and filling vertices in path at fillseed 51624 Finding path............................................................................................................................................................................................................................................................................................................................................................... done Filling 51624 nlabel 8273 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.026801.label Connecting and filling vertices in path at fillseed 55195 Finding path..................................................................................................................................................................................................................................................... done Filling 55195 nlabel 4494 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.026901.label Connecting and filling vertices in path at fillseed 55131 Finding path......................................................................................................................................................................................................................................................................................................................... done Filling 55131 nlabel 8628 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.027001.label Connecting and filling vertices in path at fillseed 52484 Finding path.......................................................................................................................................................................................................................................................... done Filling 52484 nlabel 6950 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.027101.label Connecting and filling vertices in path at fillseed 55798 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 55798 nlabel 7808 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.027201.label Connecting and filling vertices in path at fillseed 52437 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 52437 nlabel 10022 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.027301.label Connecting and filling vertices in path at fillseed 52359 Finding path............................................................................................................................................................................................................................................................................................................................................................ done Filling 52359 nlabel 9121 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.027401.label Connecting and filling vertices in path at fillseed 53251 Finding path.................................................................................................................................................................................................................................................................................................................................... done Filling 53251 nlabel 7711 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.027501.label Connecting and filling vertices in path at fillseed 53754 Finding path............................................................................................................................................................................................ done Filling 53754 nlabel 6373 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.027601.label Connecting and filling vertices in path at fillseed 52500 Finding path................................................................................................................................................................................................................................................................................................................................ done Filling 52500 nlabel 7729 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.027701.label Connecting and filling vertices in path at fillseed 119607 Finding path........................................................................................................................................................................................................................................................................................... done Filling 119607 nlabel 4078 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.027801.label Connecting and filling vertices in path at fillseed 55217 Finding path......................................................................................................................................................................................................................................................................................................................... done Filling 55217 nlabel 8703 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.027901.label Connecting and filling vertices in path at fillseed 53324 Finding path........................................................................................................................................................................................................................................................................................................................................................................... done Filling 53324 nlabel 7782 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.028001.label Connecting and filling vertices in path at fillseed 57573 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 57573 nlabel 7721 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.028101.label Connecting and filling vertices in path at fillseed 53375 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 53375 nlabel 9523 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.028201.label Connecting and filling vertices in path at fillseed 57988 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 57988 nlabel 5808 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.028301.label Connecting and filling vertices in path at fillseed 55221 Finding path.................................................................................................................................................................................................................................................................................. done Filling 55221 nlabel 7767 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.028401.label Connecting and filling vertices in path at fillseed 55872 Finding path................................................................................................................................................................................................................................................................................................... done Filling 55872 nlabel 7593 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.028501.label Connecting and filling vertices in path at fillseed 56758 Finding path.................................................................................................................................................................................................................................................................................................................................... done Filling 56758 nlabel 7725 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.028601.label Connecting and filling vertices in path at fillseed 58177 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 58177 nlabel 10401 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.028701.label Connecting and filling vertices in path at fillseed 57994 Finding path.................................................................................................................................................................................................................................................................................................................................................................................... done Filling 57994 nlabel 5580 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.028801.label Connecting and filling vertices in path at fillseed 57809 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 57809 nlabel 9019 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.028901.label Connecting and filling vertices in path at fillseed 57486 Finding path.................................................................................................................................................................................. done Filling 57486 nlabel 6254 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.029001.label Connecting and filling vertices in path at fillseed 55415 Finding path........................................................................................................................................................................................................................................................................................................................................... done Filling 55415 nlabel 8894 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.029101.label Connecting and filling vertices in path at fillseed 58680 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 58680 nlabel 6570 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.029201.label Connecting and filling vertices in path at fillseed 58882 Finding path............................................................................................................................................................................................................................................................................................................................. done Filling 58882 nlabel 7371 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.029301.label Connecting and filling vertices in path at fillseed 57685 Finding path.............................................................................................................................................................................................................................................................................................................................................. done Filling 57685 nlabel 8397 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.029401.label Connecting and filling vertices in path at fillseed 58468 Finding path...................................................................................................................................................................................................................................................................................................................................................................... done Filling 58468 nlabel 8200 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.029501.label Connecting and filling vertices in path at fillseed 58728 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 58728 nlabel 6494 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.029601.label Connecting and filling vertices in path at fillseed 119705 Finding path.................................................................................................................................................................................................................................................................................................................. done Filling 119705 nlabel 5675 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.029701.label Connecting and filling vertices in path at fillseed 58629 Finding path....................................................................................................................................................................................................................................................................................................................... done Filling 58629 nlabel 8328 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.029801.label Connecting and filling vertices in path at fillseed 60195 Finding path................................................................................................................................................................................................................................................................................. done Filling 60195 nlabel 5681 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.029901.label Connecting and filling vertices in path at fillseed 59583 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 59583 nlabel 6955 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.030001.label Connecting and filling vertices in path at fillseed 60619 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 60619 nlabel 10029 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.030101.label Connecting and filling vertices in path at fillseed 58756 Finding path............................................................................................................................................................................................................................................................................ done Filling 58756 nlabel 9126 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.030201.label Connecting and filling vertices in path at fillseed 59103 Finding path............................................................................................................................................................ done Filling 59103 nlabel 5979 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.030301.label Connecting and filling vertices in path at fillseed 61879 Finding path................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 61879 nlabel 7212 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.030401.label Connecting and filling vertices in path at fillseed 61338 Finding path............................................................................................................................................................................................................................................................................................... done Filling 61338 nlabel 3732 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.030501.label Connecting and filling vertices in path at fillseed 59666 Finding path....................................................................................................................................................................................................................................................... done Filling 59666 nlabel 9138 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.030601.label Connecting and filling vertices in path at fillseed 61079 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 61079 nlabel 8346 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.030701.label Connecting and filling vertices in path at fillseed 62737 Finding path....................................................................................................................................................................................................................................................................................................................................................................... done Filling 62737 nlabel 7779 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.030801.label Connecting and filling vertices in path at fillseed 62114 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 62114 nlabel 6762 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.030901.label Connecting and filling vertices in path at fillseed 61409 Finding path............................................................................................................................................................................................................................................................................................................................................................................... done Filling 61409 nlabel 9467 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.031001.label Connecting and filling vertices in path at fillseed 61995 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 61995 nlabel 8354 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.031101.label Connecting and filling vertices in path at fillseed 61827 Finding path...................................................................................................................................................................................................................................................................................................................................................... done Filling 61827 nlabel 5849 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.031201.label Connecting and filling vertices in path at fillseed 119585 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 119585 nlabel 5396 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.031301.label Connecting and filling vertices in path at fillseed 61352 Finding path..................................................................................................................................................................................................................................................................... done Filling 61352 nlabel 5444 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.031401.label Connecting and filling vertices in path at fillseed 62207 Finding path.................................................................................................................................................................................................. done Filling 62207 nlabel 6982 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.031501.label Connecting and filling vertices in path at fillseed 63498 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 63498 nlabel 6903 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.031601.label Connecting and filling vertices in path at fillseed 61062 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 61062 nlabel 6654 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.031701.label Connecting and filling vertices in path at fillseed 62103 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 62103 nlabel 6997 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.031801.label Connecting and filling vertices in path at fillseed 63028 Finding path........................................................................................................................................................................................................................................................................ done Filling 63028 nlabel 9702 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.031901.label Connecting and filling vertices in path at fillseed 62822 Finding path................................................................................................................................................................................................................................................ done Filling 62822 nlabel 8231 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.032001.label Connecting and filling vertices in path at fillseed 65230 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 65230 nlabel 7756 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.032101.label Connecting and filling vertices in path at fillseed 62039 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 62039 nlabel 6737 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.032201.label Connecting and filling vertices in path at fillseed 63953 Finding path................................................................................................................................................................................................................................................................................................................. done Filling 63953 nlabel 9329 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.032301.label Connecting and filling vertices in path at fillseed 63076 Finding path.................................................................................................................................................................... done Filling 63076 nlabel 7079 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.032401.label Connecting and filling vertices in path at fillseed 63612 Finding path............................................................................................................................................................................................... done Filling 63612 nlabel 5204 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.032501.label Connecting and filling vertices in path at fillseed 65835 Finding path........................................................................................................................................................................................................................................................................................................................ done Filling 65835 nlabel 10420 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.032601.label Connecting and filling vertices in path at fillseed 66387 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 66387 nlabel 9774 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.032701.label Connecting and filling vertices in path at fillseed 63879 Finding path............................................................................................................................................................................................................................................................... done Filling 63879 nlabel 9504 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.032801.label Connecting and filling vertices in path at fillseed 64527 Finding path................................................................................................................................................................................................................................................................................................................................................... done Filling 64527 nlabel 9517 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.032901.label Connecting and filling vertices in path at fillseed 66039 Finding path............................................................................................................................................................................................................................................................................................................................................................................................... done Filling 66039 nlabel 8965 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.033001.label Connecting and filling vertices in path at fillseed 65732 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 65732 nlabel 11642 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.033101.label Connecting and filling vertices in path at fillseed 119639 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 119639 nlabel 8490 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.033201.label Connecting and filling vertices in path at fillseed 119792 Finding path................................................................................................................................................................................................................................................................................................................. done Filling 119792 nlabel 9428 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.033301.label Connecting and filling vertices in path at fillseed 64737 Finding path................................................................................................................................................................................................................. done Filling 64737 nlabel 7431 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.033401.label Connecting and filling vertices in path at fillseed 66047 Finding path......................................................................................................................................................................................................................................................................................................................................................................................... done Filling 66047 nlabel 6374 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.033501.label Connecting and filling vertices in path at fillseed 69691 Finding path............................................................................................................................................................................................................................................................................................................ done Filling 69691 nlabel 7173 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.033601.label Connecting and filling vertices in path at fillseed 65580 Finding path......................................................................................................................................................................................................................................................................................................................................................................... done Filling 65580 nlabel 9681 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.033701.label Connecting and filling vertices in path at fillseed 67087 Finding path......................................................................................................................................................................................................................................................................................................................................................................... done Filling 67087 nlabel 8707 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.033801.label Connecting and filling vertices in path at fillseed 65543 Finding path................................................................................................................................................................... done Filling 65543 nlabel 6723 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.033901.label Connecting and filling vertices in path at fillseed 66685 Finding path..................................................................................................................................................... done Filling 66685 nlabel 5988 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.034001.label Connecting and filling vertices in path at fillseed 66554 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 66554 nlabel 11365 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.034101.label Connecting and filling vertices in path at fillseed 66347 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 66347 nlabel 9455 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.034201.label Connecting and filling vertices in path at fillseed 66935 Finding path.......................................................................................................................................................................................................................................................................................................................... done Filling 66935 nlabel 10078 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.034301.label Connecting and filling vertices in path at fillseed 67506 Finding path................................................................................................................................................................... done Filling 67506 nlabel 5540 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.034401.label Connecting and filling vertices in path at fillseed 69691 Finding path.................................................................................................................................................................................................................................................................................................................................................................... done Filling 69691 nlabel 7180 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.034501.label Connecting and filling vertices in path at fillseed 68419 Finding path....................................................................................................................................................................................................... done Filling 68419 nlabel 8239 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.034601.label Connecting and filling vertices in path at fillseed 67124 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 67124 nlabel 6153 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.034701.label Connecting and filling vertices in path at fillseed 68718 Finding path.............................................................................................................................................................................................................................................................................................................. done Filling 68718 nlabel 10125 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.034801.label Connecting and filling vertices in path at fillseed 67810 Finding path................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 67810 nlabel 12090 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.034901.label Connecting and filling vertices in path at fillseed 62997 Finding path.................................................................................................................................................................................................................................................. done Filling 62997 nlabel 10351 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.035001.label Connecting and filling vertices in path at fillseed 68035 Finding path............................................................................................................................................................... done Filling 68035 nlabel 5890 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.035101.label Connecting and filling vertices in path at fillseed 67943 Finding path........................................................................................................................................................................................................................................................................................................................................................................... done Filling 67943 nlabel 9772 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.035201.label Connecting and filling vertices in path at fillseed 68511 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 68511 nlabel 12391 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.035301.label Connecting and filling vertices in path at fillseed 71437 Finding path.................................................................................................................................................................................................................................... done Filling 71437 nlabel 9895 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.035401.label Connecting and filling vertices in path at fillseed 69909 Finding path.............................................................................................................................................................................................................................. done Filling 69909 nlabel 9787 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.035501.label Connecting and filling vertices in path at fillseed 70578 Finding path......................................................................................................................................................................................................................................................................................................................................................................... done Filling 70578 nlabel 9248 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.035601.label Connecting and filling vertices in path at fillseed 68670 Finding path....................................................................................................................................................... done Filling 68670 nlabel 6049 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.035701.label Connecting and filling vertices in path at fillseed 72106 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 72106 nlabel 7796 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.035801.label Connecting and filling vertices in path at fillseed 69942 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 69942 nlabel 7784 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.035901.label Connecting and filling vertices in path at fillseed 71458 Finding path.................................................................................................................................................................................................................................................................... done Filling 71458 nlabel 9485 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.036001.label Connecting and filling vertices in path at fillseed 71386 Finding path......................................................................................................................................................................................................................................................................... done Filling 71386 nlabel 9197 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.036101.label Connecting and filling vertices in path at fillseed 68790 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 68790 nlabel 9337 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.036201.label Connecting and filling vertices in path at fillseed 72113 Finding path............................................................................................................................................................................................................................................................................................................................................................................. done Filling 72113 nlabel 8149 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.036301.label Connecting and filling vertices in path at fillseed 70733 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 70733 nlabel 8045 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.036401.label Connecting and filling vertices in path at fillseed 71546 Finding path.......................................................................................................................................................................................................................................................................................................................... done Filling 71546 nlabel 5058 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.036501.label Connecting and filling vertices in path at fillseed 72334 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 72334 nlabel 9971 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.036601.label Connecting and filling vertices in path at fillseed 69150 Finding path........................................................................................................................................................................................................................................................................................ done Filling 69150 nlabel 10008 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.036701.label Connecting and filling vertices in path at fillseed 72186 Finding path............................................................................................................................................................................................................................................................................................................................................. done Filling 72186 nlabel 9128 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.036801.label Connecting and filling vertices in path at fillseed 72807 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 72807 nlabel 8263 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.036901.label Connecting and filling vertices in path at fillseed 72545 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 72545 nlabel 12954 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.037001.label Connecting and filling vertices in path at fillseed 72386 Finding path......................................................................................................................................................................................................................................................................................................... done Filling 72386 nlabel 5444 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.037101.label Connecting and filling vertices in path at fillseed 69991 Finding path................................................................................................................................................................................................................. done Filling 69991 nlabel 6339 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.037201.label Connecting and filling vertices in path at fillseed 72202 Finding path................................................................................................................................................................................................................................................................................................................................... done Filling 72202 nlabel 9038 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.037301.label Connecting and filling vertices in path at fillseed 74631 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 74631 nlabel 9297 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.037401.label Connecting and filling vertices in path at fillseed 119744 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 119744 nlabel 6150 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.037501.label Connecting and filling vertices in path at fillseed 71580 Finding path........................................................................................................................................................................................................................................................................................................................................................................... done Filling 71580 nlabel 8726 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.037601.label Connecting and filling vertices in path at fillseed 71567 Finding path...................................................................................................................................................................................................................................... done Filling 71567 nlabel 6508 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.037701.label Connecting and filling vertices in path at fillseed 73076 Finding path.............................................................................................................................................................................................................................................................................................................................................. done Filling 73076 nlabel 8730 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.037801.label Connecting and filling vertices in path at fillseed 72095 Finding path.................................................................................................................................................................................................................................................................................................................................................. done Filling 72095 nlabel 9193 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.037901.label Connecting and filling vertices in path at fillseed 74122 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 74122 nlabel 4410 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.038001.label Connecting and filling vertices in path at fillseed 73188 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 73188 nlabel 8346 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.038101.label Connecting and filling vertices in path at fillseed 74231 Finding path.......................................................................................................................................................................................................................................... done Filling 74231 nlabel 6372 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.038201.label Connecting and filling vertices in path at fillseed 72814 Finding path............................................................................................................................................ done Filling 72814 nlabel 5188 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.038301.label Connecting and filling vertices in path at fillseed 74659 Finding path.................................................................................................................................................................................................................................................................................................................................................................... done Filling 74659 nlabel 9164 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.038401.label Connecting and filling vertices in path at fillseed 75135 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 75135 nlabel 11273 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.038501.label Connecting and filling vertices in path at fillseed 72298 Finding path................................................................................................................................................................................................................................................................................................................................ done Filling 72298 nlabel 8851 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.038601.label Connecting and filling vertices in path at fillseed 73804 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 73804 nlabel 7965 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.038701.label Connecting and filling vertices in path at fillseed 74580 Finding path..................................................................................................................................................................................................................................................................................................................... done Filling 74580 nlabel 8698 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.038801.label Connecting and filling vertices in path at fillseed 119468 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 119468 nlabel 6575 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.038901.label Connecting and filling vertices in path at fillseed 75874 Finding path........................................................................................................................................................................................................................................................................ done Filling 75874 nlabel 4402 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.039001.label Connecting and filling vertices in path at fillseed 75049 Finding path.................................................................................................................................................................................................................. done Filling 75049 nlabel 8343 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.039101.label Connecting and filling vertices in path at fillseed 74021 Finding path.............................................................................................................................................................................................................................................................................................. done Filling 74021 nlabel 8501 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.039201.label Connecting and filling vertices in path at fillseed 75693 Finding path................................................................................................................................................................................................................................................................................................................................................... done Filling 75693 nlabel 9100 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.039301.label Connecting and filling vertices in path at fillseed 76178 Finding path................................................................................................................................................................................................................................................................................................................................ done Filling 76178 nlabel 9083 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.039401.label Connecting and filling vertices in path at fillseed 119874 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 119874 nlabel 4727 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.039501.label Connecting and filling vertices in path at fillseed 75913 Finding path.............................................................................................................................................................................................. done Filling 75913 nlabel 8744 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.039601.label Connecting and filling vertices in path at fillseed 75036 Finding path........................................................................................................................................................................................................................... done Filling 75036 nlabel 5992 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.039701.label Connecting and filling vertices in path at fillseed 76277 Finding path...................................................................................................................................... done Filling 76277 nlabel 5124 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.039801.label Connecting and filling vertices in path at fillseed 78649 Finding path...................................................................................................................................................................................................................................................................................................................................................... done Filling 78649 nlabel 9921 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.039901.label Connecting and filling vertices in path at fillseed 76761 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 76761 nlabel 10590 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.040001.label Connecting and filling vertices in path at fillseed 82858 Finding path....................................................................................................................................................................................................................................................................................... done Filling 82858 nlabel 9502 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.040101.label Connecting and filling vertices in path at fillseed 77308 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 77308 nlabel 8697 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.040201.label Connecting and filling vertices in path at fillseed 77184 Finding path........................................................................................................................................................................................................................................................................................................................................... done Filling 77184 nlabel 8693 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.040301.label Connecting and filling vertices in path at fillseed 119915 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 119915 nlabel 5491 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.040401.label Connecting and filling vertices in path at fillseed 77516 Finding path............................................................................................................................................................................................................................................................................................................. done Filling 77516 nlabel 3305 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.040501.label Connecting and filling vertices in path at fillseed 77531 Finding path......................................................................................................................................................................................................................................................................................................... done Filling 77531 nlabel 6995 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.040601.label Connecting and filling vertices in path at fillseed 78155 Finding path......................................................................................................................................................... done Filling 78155 nlabel 4700 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.040701.label Connecting and filling vertices in path at fillseed 80216 Finding path...................................................................................................................................................................................................................................................................................................................... done Filling 80216 nlabel 9607 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.040801.label Connecting and filling vertices in path at fillseed 77610 Finding path....................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 77610 nlabel 10035 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.040901.label Connecting and filling vertices in path at fillseed 77363 Finding path...................................................................................................................................................................................................................................................................................................... done Filling 77363 nlabel 9547 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.041001.label Connecting and filling vertices in path at fillseed 78217 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 78217 nlabel 6681 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.041101.label Connecting and filling vertices in path at fillseed 78171 Finding path............................................................................................................................................................................................................................................................................................................................ done Filling 78171 nlabel 8114 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.041201.label Connecting and filling vertices in path at fillseed 77495 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................. done Filling 77495 nlabel 119521 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.041301.label Connecting and filling vertices in path at fillseed 120269 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 120269 nlabel 7981 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.041401.label Connecting and filling vertices in path at fillseed 80230 Finding path................................................................................................................................................ done Filling 80230 nlabel 6163 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.041501.label Connecting and filling vertices in path at fillseed 78156 Finding path......................................................................................................................................................................................................................................................................................... done Filling 78156 nlabel 8479 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.041601.label Connecting and filling vertices in path at fillseed 119849 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 119849 nlabel 3885 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.041701.label Connecting and filling vertices in path at fillseed 78500 Finding path.................................................................................................................................................................................................................................. done Filling 78500 nlabel 7740 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.041801.label Connecting and filling vertices in path at fillseed 79887 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 79887 nlabel 6439 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.041901.label Connecting and filling vertices in path at fillseed 78910 Finding path............................................................................................................................................................................................................................................................................................................................................. done Filling 78910 nlabel 8825 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.042001.label Connecting and filling vertices in path at fillseed 78823 Finding path................................................................................................................................................................................................................................................................................................................. done Filling 78823 nlabel 9996 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.042101.label Connecting and filling vertices in path at fillseed 79971 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 79971 nlabel 3578 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.042201.label Connecting and filling vertices in path at fillseed 80645 Finding path................................................................................................................................................................................................................................................................................................................................................................................. done Filling 80645 nlabel 5680 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.042301.label Connecting and filling vertices in path at fillseed 80078 Finding path............................................................................................................................................................................................................................................................................... done Filling 80078 nlabel 5758 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.042401.label Connecting and filling vertices in path at fillseed 79685 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 79685 nlabel 9870 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.042501.label Connecting and filling vertices in path at fillseed 82701 Finding path............................................................................................................................................................................................................................................................ done Filling 82701 nlabel 8027 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.042601.label Connecting and filling vertices in path at fillseed 81333 Finding path....................................................................................................................................................................................................................................................... done Filling 81333 nlabel 2400 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.042701.label Connecting and filling vertices in path at fillseed 120268 Finding path............................................................................................................................................................................................................................................................................................................................................................................. done Filling 120268 nlabel 7007 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.042801.label Connecting and filling vertices in path at fillseed 81660 Finding path..................................................................................................................................................... done Filling 81660 nlabel 6045 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.042901.label Connecting and filling vertices in path at fillseed 80412 Finding path........................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 80412 nlabel 10141 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.043001.label Connecting and filling vertices in path at fillseed 82382 Finding path................................................................................................................................................................................................................................................................................................................. done Filling 82382 nlabel 9064 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.043101.label Connecting and filling vertices in path at fillseed 81489 Finding path.................................................................................................................................................................................................................................................................................................................................................................. done Filling 81489 nlabel 10995 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.043201.label Connecting and filling vertices in path at fillseed 120268 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 120268 nlabel 7438 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.043301.label Connecting and filling vertices in path at fillseed 81367 Finding path............................................................................................................................................................................................................................................... done Filling 81367 nlabel 5724 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.043401.label Connecting and filling vertices in path at fillseed 81819 Finding path......................................................................................................................................... done Filling 81819 nlabel 5366 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.043501.label Connecting and filling vertices in path at fillseed 84183 Finding path................................................................................................................................................................................................................................................................................................... done Filling 84183 nlabel 8115 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.043601.label Connecting and filling vertices in path at fillseed 81317 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 81317 nlabel 3496 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.043701.label Connecting and filling vertices in path at fillseed 82177 Finding path....................................................................................................... done Filling 82177 nlabel 3586 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.043801.label Connecting and filling vertices in path at fillseed 82822 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 82822 nlabel 6709 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.043901.label Connecting and filling vertices in path at fillseed 83533 Finding path...................................................................................................................................................................................................................... done Filling 83533 nlabel 5770 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.044001.label Connecting and filling vertices in path at fillseed 83927 Finding path..................................................................................................................................................................................................................................................................................................................................................... done Filling 83927 nlabel 9711 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.044101.label Connecting and filling vertices in path at fillseed 82136 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 82136 nlabel 3117 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.044201.label Connecting and filling vertices in path at fillseed 81459 Finding path....................................................................................................................................................................................................................................................................................... done Filling 81459 nlabel 10861 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.044301.label Connecting and filling vertices in path at fillseed 85967 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 85967 nlabel 6151 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.044401.label Connecting and filling vertices in path at fillseed 83011 Finding path.............................................................................................................................................................................................................................. done Filling 83011 nlabel 6157 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.044501.label Connecting and filling vertices in path at fillseed 84879 Finding path............................................................................................................................................................................................................................................................................................................................................... done Filling 84879 nlabel 8055 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.044601.label Connecting and filling vertices in path at fillseed 85278 Finding path....................................................................................................................................................................................................................................................................................................... done Filling 85278 nlabel 10604 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.044701.label Connecting and filling vertices in path at fillseed 81459 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 81459 nlabel 9920 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.044801.label Connecting and filling vertices in path at fillseed 82940 Finding path.................................................................................................................................................................................................................... done Filling 82940 nlabel 6799 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.044901.label Connecting and filling vertices in path at fillseed 85053 Finding path........................................................................................................................................................................................................... done Filling 85053 nlabel 6079 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.045001.label Connecting and filling vertices in path at fillseed 83817 Finding path................................................................................................................................................................................................................................................................................................................................................... done Filling 83817 nlabel 9096 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.045101.label Connecting and filling vertices in path at fillseed 82160 Finding path...................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 82160 nlabel 3484 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.045201.label Connecting and filling vertices in path at fillseed 86815 Finding path.......................................................................................................................................................................................................................................................................................................................................................... done Filling 86815 nlabel 6289 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.045301.label Connecting and filling vertices in path at fillseed 83747 Finding path................................................................................................................................................................. done Filling 83747 nlabel 5753 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.045401.label Connecting and filling vertices in path at fillseed 85507 Finding path................................................................................................................................................................................................................................................................................................... done Filling 85507 nlabel 9070 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.045501.label Connecting and filling vertices in path at fillseed 84344 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 84344 nlabel 5911 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.045601.label Connecting and filling vertices in path at fillseed 85137 Finding path............................................................................................................................................................................................................................................................................................................................................ done Filling 85137 nlabel 5596 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.045701.label Connecting and filling vertices in path at fillseed 85287 Finding path.................................................................................................................................................................. done Filling 85287 nlabel 6392 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.045801.label Connecting and filling vertices in path at fillseed 85696 Finding path................................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 85696 nlabel 9927 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.045901.label Connecting and filling vertices in path at fillseed 88792 Finding path.................................................................................................................................................................................................................................................................................................................................... done Filling 88792 nlabel 7693 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.046001.label Connecting and filling vertices in path at fillseed 86022 Finding path......................................................................................................................................... done Filling 86022 nlabel 4509 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.046101.label Connecting and filling vertices in path at fillseed 89519 Finding path............................................................................................................................................................................................................................................... done Filling 89519 nlabel 6326 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.046201.label Connecting and filling vertices in path at fillseed 86468 Finding path.................................................................................................................... done Filling 86468 nlabel 5366 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.046301.label Connecting and filling vertices in path at fillseed 88483 Finding path........................................................................................................................................................................................................ done Filling 88483 nlabel 8903 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.046401.label Connecting and filling vertices in path at fillseed 85954 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 85954 nlabel 7569 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.046501.label Connecting and filling vertices in path at fillseed 86039 Finding path......................................................................................................................................................................................................................................................... done Filling 86039 nlabel 6879 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.046601.label Connecting and filling vertices in path at fillseed 87197 Finding path........................................................................................................................ done Filling 87197 nlabel 5382 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.046701.label Connecting and filling vertices in path at fillseed 85634 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 85634 nlabel 10957 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.046801.label Connecting and filling vertices in path at fillseed 88777 Finding path................................................................................................................................................................................................................................................................................................................................. done Filling 88777 nlabel 7299 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.046901.label Connecting and filling vertices in path at fillseed 87532 Finding path................................................................................................................................................... done Filling 87532 nlabel 4678 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.047001.label Connecting and filling vertices in path at fillseed 87689 Finding path.............................................................................................................................................................................................................. done Filling 87689 nlabel 6500 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.047101.label Connecting and filling vertices in path at fillseed 87944 Finding path....................................................................................................................................................................................................................................................................................................... done Filling 87944 nlabel 10372 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.047201.label Connecting and filling vertices in path at fillseed 87711 Finding path..................................................................................................................................................................................................................................................................................................... done Filling 87711 nlabel 10187 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.047301.label Connecting and filling vertices in path at fillseed 87598 Finding path............................................................................................................................................................................................................................................................................................................................................ done Filling 87598 nlabel 9181 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.047401.label Connecting and filling vertices in path at fillseed 90245 Finding path........................................................................................................................................................................................ done Filling 90245 nlabel 6945 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.047501.label Connecting and filling vertices in path at fillseed 88694 Finding path.............................................................................................................................................. done Filling 88694 nlabel 4879 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.047601.label Connecting and filling vertices in path at fillseed 86591 Finding path...................................................................................................................................................................................................................................................................................... done Filling 86591 nlabel 7767 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.047701.label Connecting and filling vertices in path at fillseed 87521 Finding path.................................................................................................................................................................................................... done Filling 87521 nlabel 4186 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.047801.label Connecting and filling vertices in path at fillseed 90195 Finding path................................................................................................................................................................................................................................................................................. done Filling 90195 nlabel 6521 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.047901.label Connecting and filling vertices in path at fillseed 89175 Finding path.............................................................................................................................................. done Filling 89175 nlabel 5546 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.048001.label Connecting and filling vertices in path at fillseed 86566 Finding path................................................................................................................................................................................................................................................................................................................................................................ done Filling 86566 nlabel 8537 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.048101.label Connecting and filling vertices in path at fillseed 87526 Finding path...................................................................................................................................................................................................................................................................................................................................................................................... done Filling 87526 nlabel 5594 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.048201.label Connecting and filling vertices in path at fillseed 90245 Finding path.................................................................................................................................................................................................................... done Filling 90245 nlabel 6976 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.048301.label Connecting and filling vertices in path at fillseed 91388 Finding path........................................................................................................................................................................................................................................... done Filling 91388 nlabel 5601 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.048401.label Connecting and filling vertices in path at fillseed 91283 Finding path........................................................................................................................................................................................................................................................................................................................................................................................ done Filling 91283 nlabel 8093 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.048501.label Connecting and filling vertices in path at fillseed 120279 Finding path........................................................................................................................................................................................................................................................................................................ done Filling 120279 nlabel 7484 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.048601.label Connecting and filling vertices in path at fillseed 88883 Finding path.................................................................................................................................................................................................................................................................................. done Filling 88883 nlabel 5894 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.048701.label Connecting and filling vertices in path at fillseed 90910 Finding path........................................................................................................................................................................................................ done Filling 90910 nlabel 6069 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.048801.label Connecting and filling vertices in path at fillseed 92400 Finding path......................................................................................................................................................................................................................................................................................... done Filling 92400 nlabel 9493 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.048901.label Connecting and filling vertices in path at fillseed 94567 Finding path.......................................................................................................................................................................................................................................................................................... done Filling 94567 nlabel 7610 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.049001.label Connecting and filling vertices in path at fillseed 92678 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 92678 nlabel 6629 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.049101.label Connecting and filling vertices in path at fillseed 91690 Finding path........................................................................................................................................................ done Filling 91690 nlabel 5542 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.049201.label Connecting and filling vertices in path at fillseed 94446 Finding path.................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 94446 nlabel 8771 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.049301.label Connecting and filling vertices in path at fillseed 94566 Finding path.................................................................................................................................................................................................................................................................................................. done Filling 94566 nlabel 7480 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.049401.label Connecting and filling vertices in path at fillseed 88878 Finding path.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 88878 nlabel 6849 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.049501.label Connecting and filling vertices in path at fillseed 90853 Finding path........................................................................................................................................................................................................................................... done Filling 90853 nlabel 6849 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.049601.label Connecting and filling vertices in path at fillseed 93101 Finding path.......................................................................................................................................................................................................................................................................... done Filling 93101 nlabel 9536 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.049701.label Connecting and filling vertices in path at fillseed 94543 Finding path............................................................................................................................................................................................................................................................................................................................................. done Filling 94543 nlabel 7600 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.049801.label Connecting and filling vertices in path at fillseed 89556 Finding path......................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 89556 nlabel 5783 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.049901.label Connecting and filling vertices in path at fillseed 88878 Finding path..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... done Filling 88878 nlabel 8288 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.050001.label Connecting and filling vertices in path at fillseed 91459 Finding path.......................................................................................................................................................................................................... done Filling 91459 nlabel 6893 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.050101.label Connecting and filling vertices in path at fillseed 93282 Finding path.......................................................................................................................................................................................................................................................... done Filling 93282 nlabel 5413 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.050201.label Connecting and filling vertices in path at fillseed 92235 Finding path............................................................................................................................................................................................................................................................... done Filling 92235 nlabel 8568 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.050301.label Connecting and filling vertices in path at fillseed 95264 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................................................. done Filling 95264 nlabel 7885 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.050401.label Connecting and filling vertices in path at fillseed 92721 Finding path.......................................................................................................................................... done Filling 92721 nlabel 4910 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.050501.label Connecting and filling vertices in path at fillseed 93690 Finding path.............................................................................................................................................................................................................................................................................. done Filling 93690 nlabel 8782 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.050601.label Connecting and filling vertices in path at fillseed 92828 Finding path............................................................................................................................................................................................................................................................................. done Filling 92828 nlabel 10095 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.050701.label Connecting and filling vertices in path at fillseed 95303 Finding path............................................................................................................................................................................................................................................................................................... done Filling 95303 nlabel 6605 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.050801.label Connecting and filling vertices in path at fillseed 93873 Finding path................................................................................................................................................................................................................ done Filling 93873 nlabel 5409 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.050901.label Connecting and filling vertices in path at fillseed 92902 Finding path...................................................................................................................................................................................................................................................................................................... done Filling 92902 nlabel 9450 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.051001.label Connecting and filling vertices in path at fillseed 93359 Finding path......................................................................................................................................................................................................... done Filling 93359 nlabel 7263 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.051101.label Connecting and filling vertices in path at fillseed 93434 Finding path....................................................................................................................................................................... done Filling 93434 nlabel 6088 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.051201.label Connecting and filling vertices in path at fillseed 93768 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................... done Filling 93768 nlabel 8122 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.051301.label Connecting and filling vertices in path at fillseed 95911 Finding path................................................................................................................................................................................................................................................................................................................................................... done Filling 95911 nlabel 7834 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.051401.label Connecting and filling vertices in path at fillseed 96052 Finding path................................................................................................................................................................................................................................ done Filling 96052 nlabel 8507 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.051501.label Connecting and filling vertices in path at fillseed 94199 Finding path..................................................................................................................................................................................... done Filling 94199 nlabel 7066 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.051601.label Connecting and filling vertices in path at fillseed 94982 Finding path.................................................................................................................................................................................................................................................................................................. done Filling 94982 nlabel 8050 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.051701.label Connecting and filling vertices in path at fillseed 97424 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 97424 nlabel 7964 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.051801.label Connecting and filling vertices in path at fillseed 96824 Finding path.................................................................................................................................................... done Filling 96824 nlabel 6062 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.051901.label Connecting and filling vertices in path at fillseed 96720 Finding path................................................................................................................................................................................................................................................................... done Filling 96720 nlabel 5114 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.052001.label Connecting and filling vertices in path at fillseed 96662 Finding path............................................................................................................................................................................................................................................................................................... done Filling 96662 nlabel 7603 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.052101.label Connecting and filling vertices in path at fillseed 96767 Finding path................................................................................................................................................................................................................................................... done Filling 96767 nlabel 7271 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.052201.label Connecting and filling vertices in path at fillseed 97267 Finding path............................................................................................................................................................. done Filling 97267 nlabel 5866 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.052301.label Connecting and filling vertices in path at fillseed 96203 Finding path..................................................................................................................................................................................................................................................................................................................................................................... done Filling 96203 nlabel 8965 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.052401.label Connecting and filling vertices in path at fillseed 96815 Finding path................................................................................................................................................................................................................................................. done Filling 96815 nlabel 7863 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.052501.label Connecting and filling vertices in path at fillseed 97157 Finding path................................................................................................................... done Filling 97157 nlabel 6037 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.052601.label Connecting and filling vertices in path at fillseed 98804 Finding path.......................................................................................................................................................................................................................................................................................................................................................................................... done Filling 98804 nlabel 7438 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.052701.label Connecting and filling vertices in path at fillseed 96830 Finding path............................................................................................................................................................................................. done Filling 96830 nlabel 7694 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.052801.label Connecting and filling vertices in path at fillseed 98699 Finding path........................................................................................................................ done Filling 98699 nlabel 6458 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.052901.label Connecting and filling vertices in path at fillseed 98787 Finding path............................................................................................................................................................................................................................................................................................................................................................................................................ done Filling 98787 nlabel 6878 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.053001.label Connecting and filling vertices in path at fillseed 98207 Finding path......................................................................................................................................................................................................................................................................................................................................................................... done Filling 98207 nlabel 6608 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.053101.label Connecting and filling vertices in path at fillseed 98322 Finding path.......................................................................................................................................................................................... done Filling 98322 nlabel 5641 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.053201.label Connecting and filling vertices in path at fillseed 99298 Finding path........................................................................................................................................................... done Filling 99298 nlabel 6544 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.053301.label Connecting and filling vertices in path at fillseed 98886 Finding path............................................................................................................................................................................................................................................................................................................................... done Filling 98886 nlabel 7732 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.053401.label Connecting and filling vertices in path at fillseed 100595 Finding path............................................................................................................................................................................................................................................. done Filling 100595 nlabel 5833 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.053501.label Connecting and filling vertices in path at fillseed 101372 Finding path................................................................................................................................................................................................................................................ done Filling 101372 nlabel 4428 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.053601.label Connecting and filling vertices in path at fillseed 98483 Finding path................................................................................................................................................................................................................................................................... done Filling 98483 nlabel 7764 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.053701.label Connecting and filling vertices in path at fillseed 99749 Finding path................................................................................................................................................................................... done Filling 99749 nlabel 5135 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.053801.label Connecting and filling vertices in path at fillseed 100297 Finding path....................................................................................................................... done Filling 100297 nlabel 5982 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.053901.label Connecting and filling vertices in path at fillseed 101128 Finding path........................................................................................................................................................................................................................................................................................................................................................ done Filling 101128 nlabel 7614 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.054001.label Connecting and filling vertices in path at fillseed 101484 Finding path........................................................................................................................................................................................................................................................................... done Filling 101484 nlabel 8566 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.054101.label Connecting and filling vertices in path at fillseed 101378 Finding path...................................................................................................................................................................................................................................... done Filling 101378 nlabel 5417 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.054201.label Connecting and filling vertices in path at fillseed 102038 Finding path................................................................................................................................................................................................ done Filling 102038 nlabel 6356 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.054301.label Connecting and filling vertices in path at fillseed 101964 Finding path.............................................................................................................................................................................................................................................................................................................................................. done Filling 101964 nlabel 7152 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.054401.label Connecting and filling vertices in path at fillseed 102770 Finding path................................................................................................................................................................................................................... done Filling 102770 nlabel 6044 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.054501.label Connecting and filling vertices in path at fillseed 100750 Finding path.................................................................................................................................................................... done Filling 100750 nlabel 6911 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.054601.label Connecting and filling vertices in path at fillseed 101881 Finding path....................................................................................................................................................................................................................................................................................................................................................................................... done Filling 101881 nlabel 7180 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.054701.label Connecting and filling vertices in path at fillseed 101285 Finding path......................................................................................................................................................................................................................................................................................................................................................... done Filling 101285 nlabel 7430 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.054801.label Connecting and filling vertices in path at fillseed 103499 Finding path........................................................................................................................................................................................................................................ done Filling 103499 nlabel 5738 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.054901.label Connecting and filling vertices in path at fillseed 102580 Finding path...................................................................................................................................................................... done Filling 102580 nlabel 7249 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.055001.label Connecting and filling vertices in path at fillseed 101804 Finding path................................................................................................................................................................................................................... done Filling 101804 nlabel 8328 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.055101.label Connecting and filling vertices in path at fillseed 104017 Finding path...................................................................................................................................................................................................................................................................... done Filling 104017 nlabel 7226 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.055201.label Connecting and filling vertices in path at fillseed 100618 Finding path........................................................................................................................................................................................................................................ done Filling 100618 nlabel 7961 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.055301.label Connecting and filling vertices in path at fillseed 102419 Finding path......................................................................................................................................... done Filling 102419 nlabel 6460 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.055401.label Connecting and filling vertices in path at fillseed 105073 Finding path........................................................................................................................................................................................................................... done Filling 105073 nlabel 7516 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.055501.label Connecting and filling vertices in path at fillseed 102843 Finding path................................................................................................................................................................................................... done Filling 102843 nlabel 7739 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.055601.label Connecting and filling vertices in path at fillseed 104990 Finding path.......................................................................................................................................... done Filling 104990 nlabel 6755 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.055701.label Connecting and filling vertices in path at fillseed 104651 Finding path................................................................................................................................................................................................................................................................................ done Filling 104651 nlabel 7081 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.055801.label Connecting and filling vertices in path at fillseed 103547 Finding path............................................................................................................................................................................................................................................... done Filling 103547 nlabel 7869 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.055901.label Connecting and filling vertices in path at fillseed 105615 Finding path.................................................................................................................... done Filling 105615 nlabel 5050 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.056001.label Connecting and filling vertices in path at fillseed 105532 Finding path.............................................................................................................................................. done Filling 105532 nlabel 5918 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.056101.label Connecting and filling vertices in path at fillseed 104715 Finding path............................................................................................................................................................................................................................................................................................................................. done Filling 104715 nlabel 8088 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.056201.label Connecting and filling vertices in path at fillseed 102829 Finding path................................................................................................................................................................................................. done Filling 102829 nlabel 7666 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.056301.label Connecting and filling vertices in path at fillseed 104648 Finding path.................................................................................................................................. done Filling 104648 nlabel 6989 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.056401.label Connecting and filling vertices in path at fillseed 106260 Finding path................................................................................................................................................................................................................................................................................................................. done Filling 106260 nlabel 8001 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.056501.label Connecting and filling vertices in path at fillseed 106400 Finding path.................................................................................................................................................................................................................... done Filling 106400 nlabel 5905 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.056601.label Connecting and filling vertices in path at fillseed 107006 Finding path.............................................................................................................................................. done Filling 107006 nlabel 7110 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.056701.label Connecting and filling vertices in path at fillseed 105777 Finding path............................................................................................................................................................................................................................................... done Filling 105777 nlabel 7879 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.056801.label Connecting and filling vertices in path at fillseed 107225 Finding path......................................................................................................................................................................................................................... done Filling 107225 nlabel 7490 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.056901.label Connecting and filling vertices in path at fillseed 106392 Finding path................................................................................................................................................... done Filling 106392 nlabel 3986 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.057001.label Connecting and filling vertices in path at fillseed 106569 Finding path........................................................................................................................................................................... done Filling 106569 nlabel 7631 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.057101.label Connecting and filling vertices in path at fillseed 107821 Finding path................................................................................................................................................................................................................................... done Filling 107821 nlabel 7545 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.057201.label Connecting and filling vertices in path at fillseed 107848 Finding path............................................................................................................................. done Filling 107848 nlabel 4890 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.057301.label Connecting and filling vertices in path at fillseed 106631 Finding path................................................................................................................................................................................ done Filling 106631 nlabel 7993 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.057401.label Connecting and filling vertices in path at fillseed 105497 Finding path......................................................................................................................................................................................................................... done Filling 105497 nlabel 5953 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.057501.label Connecting and filling vertices in path at fillseed 107278 Finding path............................................................................................................................................. done Filling 107278 nlabel 6544 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.057601.label Connecting and filling vertices in path at fillseed 107639 Finding path.................................................................................................................................................................................................. done Filling 107639 nlabel 5458 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.057701.label Connecting and filling vertices in path at fillseed 108993 Finding path..................................................................................................................... done Filling 108993 nlabel 6666 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.057801.label Connecting and filling vertices in path at fillseed 108481 Finding path................................................................................................................................................................................................................................................. done Filling 108481 nlabel 7664 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.057901.label Connecting and filling vertices in path at fillseed 106880 Finding path..................................................................................................................................................... done Filling 106880 nlabel 6292 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.058001.label Connecting and filling vertices in path at fillseed 108342 Finding path............................................................................................................................................................................................................ done Filling 108342 nlabel 5363 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.058101.label Connecting and filling vertices in path at fillseed 107308 Finding path...................................................................................................................................................................................................................... done Filling 107308 nlabel 7241 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.058201.label Connecting and filling vertices in path at fillseed 109670 Finding path....................................................................................................................................... done Filling 109670 nlabel 6216 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.058301.label Connecting and filling vertices in path at fillseed 109635 Finding path.......................................................................................................................................... done Filling 109635 nlabel 5896 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.058401.label Connecting and filling vertices in path at fillseed 107402 Finding path................................................................................................................................................................................................................... done Filling 107402 nlabel 7786 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.058501.label Connecting and filling vertices in path at fillseed 109522 Finding path........................................................................................................... done Filling 109522 nlabel 6624 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.058601.label Connecting and filling vertices in path at fillseed 109637 Finding path.................................................................................................................................................................................... done Filling 109637 nlabel 7442 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.058701.label Connecting and filling vertices in path at fillseed 110971 Finding path............................................................................................................................................................. done Filling 110971 nlabel 6806 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.058801.label Connecting and filling vertices in path at fillseed 111104 Finding path........................................................................................................................................................................................................................................ done Filling 111104 nlabel 6498 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.058901.label Connecting and filling vertices in path at fillseed 110820 Finding path............................................................................................................................................................. done Filling 110820 nlabel 7527 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.059001.label Connecting and filling vertices in path at fillseed 110406 Finding path............................................................................................................................................................ done Filling 110406 nlabel 7207 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.059101.label Connecting and filling vertices in path at fillseed 111251 Finding path.......................................................................................................... done Filling 111251 nlabel 6602 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.059201.label Connecting and filling vertices in path at fillseed 110840 Finding path...................................................................................................................................................................... done Filling 110840 nlabel 6416 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.059301.label Connecting and filling vertices in path at fillseed 111383 Finding path....................................................................................................................................................... done Filling 111383 nlabel 5592 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.059401.label Connecting and filling vertices in path at fillseed 110967 Finding path.............................................................................................................................................................................................................................. done Filling 110967 nlabel 8190 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.059501.label Connecting and filling vertices in path at fillseed 110898 Finding path............................................................................................................................................................................................................. done Filling 110898 nlabel 6879 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.059601.label Connecting and filling vertices in path at fillseed 111643 Finding path................................................................................................................................... done Filling 111643 nlabel 6718 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.059701.label Connecting and filling vertices in path at fillseed 111790 Finding path............................................................................................................. done Filling 111790 nlabel 6751 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.059801.label Connecting and filling vertices in path at fillseed 110288 Finding path................................................................................................................................................................................................... done Filling 110288 nlabel 6468 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.059901.label Connecting and filling vertices in path at fillseed 112252 Finding path........................................................................................................................................................................... done Filling 112252 nlabel 7083 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.060001.label Connecting and filling vertices in path at fillseed 112012 Finding path............................................................................................................................................................................................................................... done Filling 112012 nlabel 8144 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.060101.label Connecting and filling vertices in path at fillseed 111445 Finding path...................................................................................................................................................................................................... done Filling 111445 nlabel 6752 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.060201.label Connecting and filling vertices in path at fillseed 112165 Finding path............................................................................................................................................................................................................................................................................................. done Filling 112165 nlabel 5664 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.060301.label Connecting and filling vertices in path at fillseed 112811 Finding path.......................................................................................... done Filling 112811 nlabel 6585 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.060401.label Connecting and filling vertices in path at fillseed 112941 Finding path................................................................................................................................................................................. done Filling 112941 nlabel 6148 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.060501.label Connecting and filling vertices in path at fillseed 113214 Finding path................................................................................................................................................ done Filling 113214 nlabel 6358 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.060601.label Connecting and filling vertices in path at fillseed 113401 Finding path.................................................................................................................................................................................................................................................................................... done Filling 113401 nlabel 6204 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.060701.label Connecting and filling vertices in path at fillseed 115019 Finding path................................................................................................................................................................................... done Filling 115019 nlabel 6813 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.060801.label Connecting and filling vertices in path at fillseed 113010 Finding path............................................................................................................................................................................................................................................... done Filling 113010 nlabel 7541 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.060901.label Connecting and filling vertices in path at fillseed 113855 Finding path.................................................................................................................................................................................... done Filling 113855 nlabel 6204 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.061001.label Connecting and filling vertices in path at fillseed 113188 Finding path................................................................................................................................................................ done Filling 113188 nlabel 5810 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.061101.label Connecting and filling vertices in path at fillseed 113714 Finding path.............................................................................................................. done Filling 113714 nlabel 6911 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.061201.label Connecting and filling vertices in path at fillseed 113378 Finding path............................................................................................................................................... done Filling 113378 nlabel 4747 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.061301.label Connecting and filling vertices in path at fillseed 114113 Finding path................................................................................................................................................... done Filling 114113 nlabel 6129 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.061401.label Connecting and filling vertices in path at fillseed 113304 Finding path..................................................................................................................................... done Filling 113304 nlabel 6348 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.061501.label Connecting and filling vertices in path at fillseed 114768 Finding path.......................................................................................................................................................................................................... done Filling 114768 nlabel 6024 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.061601.label Connecting and filling vertices in path at fillseed 114380 Finding path............................................................................................................................................................................................ done Filling 114380 nlabel 6618 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.061701.label Connecting and filling vertices in path at fillseed 114683 Finding path....................................................................................................................................................................................................................... done Filling 114683 nlabel 6898 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.061801.label Connecting and filling vertices in path at fillseed 113675 Finding path............................................................................................................................................... done Filling 113675 nlabel 6106 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.061901.label Connecting and filling vertices in path at fillseed 113941 Finding path........................................................................................................................................................... done Filling 113941 nlabel 6330 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.062001.label Connecting and filling vertices in path at fillseed 115420 Finding path............................................................................................................................................................................... done Filling 115420 nlabel 6603 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.062101.label Connecting and filling vertices in path at fillseed 115214 Finding path................................................................................................................................................................ done Filling 115214 nlabel 6359 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.062201.label Connecting and filling vertices in path at fillseed 115132 Finding path......................................................................................................................................................................................................... done Filling 115132 nlabel 7225 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.062301.label Connecting and filling vertices in path at fillseed 115120 Finding path...................................................................................................................................................................................................... done Filling 115120 nlabel 6391 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.062401.label Connecting and filling vertices in path at fillseed 115547 Finding path...................................................................................................................................................................... done Filling 115547 nlabel 5683 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.062501.label Connecting and filling vertices in path at fillseed 115471 Finding path............................................................................................................................................................................................................................................................................................ done Filling 115471 nlabel 7500 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.062601.label Connecting and filling vertices in path at fillseed 116125 Finding path................................................................................................................................................................................................... done Filling 116125 nlabel 4912 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.062701.label Connecting and filling vertices in path at fillseed 116371 Finding path.................................................................................................................... done Filling 116371 nlabel 5532 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.062801.label Connecting and filling vertices in path at fillseed 116492 Finding path...................................................................................................................................................................................... done Filling 116492 nlabel 6043 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.062901.label Connecting and filling vertices in path at fillseed 116685 Finding path......................................................................................................................................................................... done Filling 116685 nlabel 6297 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.063001.label Connecting and filling vertices in path at fillseed 116471 Finding path............................................................................................................................................................................................ done Filling 116471 nlabel 5751 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.063101.label Connecting and filling vertices in path at fillseed 116527 Finding path..................................................................................................................................... done Filling 116527 nlabel 5539 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.063201.label Connecting and filling vertices in path at fillseed 116403 Finding path..................................................................................................................................................................................... done Filling 116403 nlabel 5976 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.063301.label Connecting and filling vertices in path at fillseed 116715 Finding path.......................................................................................................................................................................... done Filling 116715 nlabel 5300 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.063401.label Connecting and filling vertices in path at fillseed 116485 Finding path............................................................................................................................................................................. done Filling 116485 nlabel 6275 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.063501.label Connecting and filling vertices in path at fillseed 116786 Finding path.................................................................................................................................................................................... done Filling 116786 nlabel 5643 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.063601.label Connecting and filling vertices in path at fillseed 116796 Finding path.......................................................................................................................................................................... done Filling 116796 nlabel 5886 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.063701.label Connecting and filling vertices in path at fillseed 116812 Finding path.......................................................................................................................................................... done Filling 116812 nlabel 6249 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.063801.label Connecting and filling vertices in path at fillseed 116973 Finding path.............................................................................................................................................................................................................. done Filling 116973 nlabel 6360 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.063901.label Connecting and filling vertices in path at fillseed 117143 Finding path.................................................................................................................................................................................................. done Filling 117143 nlabel 6089 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.064001.label Connecting and filling vertices in path at fillseed 117025 Finding path..................................................................................................................................................................................................... done Filling 117025 nlabel 6574 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.064101.label Connecting and filling vertices in path at fillseed 116921 Finding path............................................................................................................................................................................... done Filling 116921 nlabel 6281 Saving label file /home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial.064201.label ================= compute_lgi('rh.pial','rh.pial-outer-smoothed','/home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial-outer-smoothed-normals.asc',100,25,'/home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial'); exit ================= MATLAB is selecting SOFTWARE OPENGL rendering. < M A T L A B (R) > Copyright 1984-2021 The MathWorks, Inc. R2021a (9.10.0.1602886) 64-bit (glnxa64) February 17, 2021 Warning: Unable to create personal MATLAB work folder:/home/yarkin/Documents/MATLAB For online documentation, see https://www.mathworks.com/support For product information, visit www.mathworks.com. >> loading datas ... ...reading surface file: rh.pial ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.08 sec) ...reading surface file: rh.pial-outer-smoothed ...reading triangle file ...adding 1 to face indices for matlab compatibility. ...done ( 0.01 sec) preparing outer mesh structure ... face 5000 / 128500 face 10000 / 128500 face 15000 / 128500 face 20000 / 128500 face 25000 / 128500 face 30000 / 128500 face 35000 / 128500 face 40000 / 128500 face 45000 / 128500 face 50000 / 128500 face 55000 / 128500 face 60000 / 128500 face 65000 / 128500 face 70000 / 128500 face 75000 / 128500 face 80000 / 128500 face 85000 / 128500 face 90000 / 128500 face 95000 / 128500 face 100000 / 128500 face 105000 / 128500 face 110000 / 128500 face 115000 / 128500 face 120000 / 128500 face 125000 / 128500 reading normals info ... mesh_outer = struct with fields: vertices: [64252x3 double] faces: [128500x3 double] facesOfVertex: [64252x1 struct] vertexNormal: [64252x3 double] preparing pial mesh structure ... face 5000 / 241070 face 10000 / 241070 face 15000 / 241070 face 20000 / 241070 face 25000 / 241070 face 30000 / 241070 face 35000 / 241070 face 40000 / 241070 face 45000 / 241070 face 50000 / 241070 face 55000 / 241070 face 60000 / 241070 face 65000 / 241070 face 70000 / 241070 face 75000 / 241070 face 80000 / 241070 face 85000 / 241070 face 90000 / 241070 face 95000 / 241070 face 100000 / 241070 face 105000 / 241070 face 110000 / 241070 face 115000 / 241070 face 120000 / 241070 face 125000 / 241070 face 130000 / 241070 face 135000 / 241070 face 140000 / 241070 face 145000 / 241070 face 150000 / 241070 face 155000 / 241070 face 160000 / 241070 face 165000 / 241070 face 170000 / 241070 face 175000 / 241070 face 180000 / 241070 face 185000 / 241070 face 190000 / 241070 face 195000 / 241070 face 200000 / 241070 face 205000 / 241070 face 210000 / 241070 face 215000 / 241070 face 220000 / 241070 face 225000 / 241070 face 230000 / 241070 face 235000 / 241070 face 240000 / 241070 mesh_total = struct with fields: vertices: [120537x3 double] faces: [241070x3 double] facesOfVertex: [120537x1 struct] ...searching for mesh edges...done (62.91 sec). loading outer area information... lGI for vertex number 1 of the outer mesh is 2.3693 ratio saved at 1 lGI for vertex number 101 of the outer mesh is 2.6172 lGI for vertex number 201 of the outer mesh is 3.4146 lGI for vertex number 301 of the outer mesh is 2.0637 lGI for vertex number 401 of the outer mesh is 3.0558 lGI for vertex number 501 of the outer mesh is 2.8355 lGI for vertex number 601 of the outer mesh is 2.1611 lGI for vertex number 701 of the outer mesh is 2.5805 lGI for vertex number 801 of the outer mesh is 3.1098 lGI for vertex number 901 of the outer mesh is 2.9802 lGI for vertex number 1001 of the outer mesh is 2.0638 lGI for vertex number 1101 of the outer mesh is 2.2182 lGI for vertex number 1201 of the outer mesh is 2.8854 lGI for vertex number 1301 of the outer mesh is 2.2167 lGI for vertex number 1401 of the outer mesh is 3.0911 lGI for vertex number 1501 of the outer mesh is 2.1822 lGI for vertex number 1601 of the outer mesh is 2.6842 lGI for vertex number 1701 of the outer mesh is 2.2232 lGI for vertex number 1801 of the outer mesh is 3.145 lGI for vertex number 1901 of the outer mesh is 2.9771 lGI for vertex number 2001 of the outer mesh is 3.3606 lGI for vertex number 2101 of the outer mesh is 2.9664 lGI for vertex number 2201 of the outer mesh is 2.1486 lGI for vertex number 2301 of the outer mesh is 2.0846 lGI for vertex number 2401 of the outer mesh is 3.0572 lGI for vertex number 2501 of the outer mesh is 2.9048 lGI for vertex number 2601 of the outer mesh is 2.0996 lGI for vertex number 2701 of the outer mesh is 3.1004 lGI for vertex number 2801 of the outer mesh is 2.1087 lGI for vertex number 2901 of the outer mesh is 2.6658 lGI for vertex number 3001 of the outer mesh is 2.2515 lGI for vertex number 3101 of the outer mesh is 3.1695 lGI for vertex number 3201 of the outer mesh is 3.1066 lGI for vertex number 3301 of the outer mesh is 3.0712 lGI for vertex number 3401 of the outer mesh is 2.9176 lGI for vertex number 3501 of the outer mesh is 2.4319 lGI for vertex number 3601 of the outer mesh is 2.7865 lGI for vertex number 3701 of the outer mesh is 2.1101 lGI for vertex number 3801 of the outer mesh is 2.931 lGI for vertex number 3901 of the outer mesh is 2.5507 lGI for vertex number 4001 of the outer mesh is 2.479 lGI for vertex number 4101 of the outer mesh is 2.2403 lGI for vertex number 4201 of the outer mesh is 3.2442 lGI for vertex number 4301 of the outer mesh is 2.8663 lGI for vertex number 4401 of the outer mesh is 2.7831 lGI for vertex number 4501 of the outer mesh is 2.5551 lGI for vertex number 4601 of the outer mesh is 2.1218 lGI for vertex number 4701 of the outer mesh is 3.328 lGI for vertex number 4801 of the outer mesh is 2.9515 lGI for vertex number 4901 of the outer mesh is 2.1904 lGI for vertex number 5001 of the outer mesh is 2.6847 lGI for vertex number 5101 of the outer mesh is 2.9424 lGI for vertex number 5201 of the outer mesh is 3.0975 lGI for vertex number 5301 of the outer mesh is 2.9241 lGI for vertex number 5401 of the outer mesh is 2.8362 lGI for vertex number 5501 of the outer mesh is 2.5384 lGI for vertex number 5601 of the outer mesh is 3.1457 lGI for vertex number 5701 of the outer mesh is 2.8232 lGI for vertex number 5801 of the outer mesh is 3.0081 lGI for vertex number 5901 of the outer mesh is 3.1174 lGI for vertex number 6001 of the outer mesh is 2.2944 lGI for vertex number 6101 of the outer mesh is 3.0923 lGI for vertex number 6201 of the outer mesh is 2.4237 lGI for vertex number 6301 of the outer mesh is 3.1656 lGI for vertex number 6401 of the outer mesh is 2.4174 lGI for vertex number 6501 of the outer mesh is 2.9963 lGI for vertex number 6601 of the outer mesh is 2.646 lGI for vertex number 6701 of the outer mesh is 2.2088 lGI for vertex number 6801 of the outer mesh is 2.0899 lGI for vertex number 6901 of the outer mesh is 2.9512 lGI for vertex number 7001 of the outer mesh is 2.5117 lGI for vertex number 7101 of the outer mesh is 3.038 lGI for vertex number 7201 of the outer mesh is 1.9711 lGI for vertex number 7301 of the outer mesh is 2.9126 lGI for vertex number 7401 of the outer mesh is 2.4873 lGI for vertex number 7501 of the outer mesh is 3.165 lGI for vertex number 7601 of the outer mesh is 2.5231 lGI for vertex number 7701 of the outer mesh is 2.5038 lGI for vertex number 7801 of the outer mesh is 2.4651 lGI for vertex number 7901 of the outer mesh is 3.1857 lGI for vertex number 8001 of the outer mesh is 2.5163 lGI for vertex number 8101 of the outer mesh is 2.8635 lGI for vertex number 8201 of the outer mesh is 2.4555 lGI for vertex number 8301 of the outer mesh is 2.4203 lGI for vertex number 8401 of the outer mesh is 2.1566 lGI for vertex number 8501 of the outer mesh is 1.8861 lGI for vertex number 8601 of the outer mesh is 3.241 lGI for vertex number 8701 of the outer mesh is 2.5324 lGI for vertex number 8801 of the outer mesh is 2.7238 lGI for vertex number 8901 of the outer mesh is 1.7947 lGI for vertex number 9001 of the outer mesh is 3.0698 lGI for vertex number 9101 of the outer mesh is 2.9221 lGI for vertex number 9201 of the outer mesh is 2.2434 lGI for vertex number 9301 of the outer mesh is 2.3266 lGI for vertex number 9401 of the outer mesh is 2.6156 lGI for vertex number 9501 of the outer mesh is 2.5378 lGI for vertex number 9601 of the outer mesh is 2.3417 lGI for vertex number 9701 of the outer mesh is 2.8291 lGI for vertex number 9801 of the outer mesh is 2.1186 lGI for vertex number 9901 of the outer mesh is 3.4247 lGI for vertex number 10001 of the outer mesh is 2.5425 ratio saved at 10001 lGI for vertex number 10101 of the outer mesh is 2.9666 lGI for vertex number 10201 of the outer mesh is 2.3097 lGI for vertex number 10301 of the outer mesh is 2.0096 lGI for vertex number 10401 of the outer mesh is 2.4694 lGI for vertex number 10501 of the outer mesh is 2.968 lGI for vertex number 10601 of the outer mesh is 2.7199 lGI for vertex number 10701 of the outer mesh is 2.1989 lGI for vertex number 10801 of the outer mesh is 3.0097 lGI for vertex number 10901 of the outer mesh is 2.5647 lGI for vertex number 11001 of the outer mesh is 2.2897 lGI for vertex number 11101 of the outer mesh is 2.6279 lGI for vertex number 11201 of the outer mesh is 3.1121 lGI for vertex number 11301 of the outer mesh is 2.9235 lGI for vertex number 11401 of the outer mesh is 2.509 lGI for vertex number 11501 of the outer mesh is 2.1756 lGI for vertex number 11601 of the outer mesh is 2.9748 lGI for vertex number 11701 of the outer mesh is 2.7754 lGI for vertex number 11801 of the outer mesh is 2.4739 lGI for vertex number 11901 of the outer mesh is 2.0831 lGI for vertex number 12001 of the outer mesh is 2.1758 lGI for vertex number 12101 of the outer mesh is 2.8054 lGI for vertex number 12201 of the outer mesh is 2.5017 lGI for vertex number 12301 of the outer mesh is 2.2369 lGI for vertex number 12401 of the outer mesh is 2.1733 lGI for vertex number 12501 of the outer mesh is 2.3766 lGI for vertex number 12601 of the outer mesh is 2.5231 lGI for vertex number 12701 of the outer mesh is 2.4811 lGI for vertex number 12801 of the outer mesh is 2.9077 lGI for vertex number 12901 of the outer mesh is 2.9271 lGI for vertex number 13001 of the outer mesh is 2.4867 lGI for vertex number 13101 of the outer mesh is 2.4564 lGI for vertex number 13201 of the outer mesh is 2.467 lGI for vertex number 13301 of the outer mesh is 2.6388 lGI for vertex number 13401 of the outer mesh is 2.0611 lGI for vertex number 13501 of the outer mesh is 2.1376 lGI for vertex number 13601 of the outer mesh is 2.9414 lGI for vertex number 13701 of the outer mesh is 2.6052 lGI for vertex number 13801 of the outer mesh is 2.4995 lGI for vertex number 13901 of the outer mesh is 2.6395 lGI for vertex number 14001 of the outer mesh is 2.2696 lGI for vertex number 14101 of the outer mesh is 2.5853 lGI for vertex number 14201 of the outer mesh is 2.2873 lGI for vertex number 14301 of the outer mesh is 2.7259 lGI for vertex number 14401 of the outer mesh is 2.962 lGI for vertex number 14501 of the outer mesh is 2.1746 lGI for vertex number 14601 of the outer mesh is 2.569 lGI for vertex number 14701 of the outer mesh is 2.735 lGI for vertex number 14801 of the outer mesh is 2.2865 lGI for vertex number 14901 of the outer mesh is 2.6802 lGI for vertex number 15001 of the outer mesh is 3.0868 lGI for vertex number 15101 of the outer mesh is 2.7521 lGI for vertex number 15201 of the outer mesh is 2.57 lGI for vertex number 15301 of the outer mesh is 2.6019 lGI for vertex number 15401 of the outer mesh is 2.0369 lGI for vertex number 15501 of the outer mesh is 2.4936 lGI for vertex number 15601 of the outer mesh is 2.7676 lGI for vertex number 15701 of the outer mesh is 2.8673 lGI for vertex number 15801 of the outer mesh is 2.6909 lGI for vertex number 15901 of the outer mesh is 3.0029 lGI for vertex number 16001 of the outer mesh is 2.5281 lGI for vertex number 16101 of the outer mesh is 2.481 lGI for vertex number 16201 of the outer mesh is 2.6482 lGI for vertex number 16301 of the outer mesh is 2.8645 lGI for vertex number 16401 of the outer mesh is 3.0674 lGI for vertex number 16501 of the outer mesh is 2.62 lGI for vertex number 16601 of the outer mesh is 2.6528 lGI for vertex number 16701 of the outer mesh is 2.942 lGI for vertex number 16801 of the outer mesh is 2.9007 lGI for vertex number 16901 of the outer mesh is 2.8249 lGI for vertex number 17001 of the outer mesh is 2.4832 lGI for vertex number 17101 of the outer mesh is 1.9581 lGI for vertex number 17201 of the outer mesh is 2.882 lGI for vertex number 17301 of the outer mesh is 2.3586 lGI for vertex number 17401 of the outer mesh is 2.6207 lGI for vertex number 17501 of the outer mesh is 2.0191 lGI for vertex number 17601 of the outer mesh is 2.1932 lGI for vertex number 17701 of the outer mesh is 2.7224 lGI for vertex number 17801 of the outer mesh is 2.7749 lGI for vertex number 17901 of the outer mesh is 3.1117 lGI for vertex number 18001 of the outer mesh is 2.1634 lGI for vertex number 18101 of the outer mesh is 2.6009 lGI for vertex number 18201 of the outer mesh is 2.2328 lGI for vertex number 18301 of the outer mesh is 2.9001 lGI for vertex number 18401 of the outer mesh is 2.766 lGI for vertex number 18501 of the outer mesh is 2.2091 lGI for vertex number 18601 of the outer mesh is 2.6243 lGI for vertex number 18701 of the outer mesh is 3.1294 lGI for vertex number 18801 of the outer mesh is 2.969 lGI for vertex number 18901 of the outer mesh is 2.7357 lGI for vertex number 19001 of the outer mesh is 2.525 lGI for vertex number 19101 of the outer mesh is 2.5544 lGI for vertex number 19201 of the outer mesh is 3.265 lGI for vertex number 19301 of the outer mesh is 2.6731 lGI for vertex number 19401 of the outer mesh is 3.6115 lGI for vertex number 19501 of the outer mesh is 2.5607 lGI for vertex number 19601 of the outer mesh is 2.6602 lGI for vertex number 19701 of the outer mesh is 3.2295 lGI for vertex number 19801 of the outer mesh is 2.3774 lGI for vertex number 19901 of the outer mesh is 1.88 lGI for vertex number 20001 of the outer mesh is 2.1632 ratio saved at 20001 lGI for vertex number 20101 of the outer mesh is 2.8236 lGI for vertex number 20201 of the outer mesh is 2.9078 lGI for vertex number 20301 of the outer mesh is 3.0466 lGI for vertex number 20401 of the outer mesh is 3.5263 lGI for vertex number 20501 of the outer mesh is 2.2759 lGI for vertex number 20601 of the outer mesh is 2.4527 lGI for vertex number 20701 of the outer mesh is 3.3985 lGI for vertex number 20801 of the outer mesh is 3.6532 lGI for vertex number 20901 of the outer mesh is 2.3943 lGI for vertex number 21001 of the outer mesh is 2.488 lGI for vertex number 21101 of the outer mesh is 3.2005 lGI for vertex number 21201 of the outer mesh is 2.1025 lGI for vertex number 21301 of the outer mesh is 2.3731 lGI for vertex number 21401 of the outer mesh is 2.3857 lGI for vertex number 21501 of the outer mesh is 3.3598 lGI for vertex number 21601 of the outer mesh is 2.1495 lGI for vertex number 21701 of the outer mesh is 2.2315 lGI for vertex number 21801 of the outer mesh is 2.6015 lGI for vertex number 21901 of the outer mesh is 3.3433 lGI for vertex number 22001 of the outer mesh is 3.6587 lGI for vertex number 22101 of the outer mesh is 2.3271 lGI for vertex number 22201 of the outer mesh is 2.4588 lGI for vertex number 22301 of the outer mesh is 2.8792 lGI for vertex number 22401 of the outer mesh is 2.155 lGI for vertex number 22501 of the outer mesh is 3.4736 lGI for vertex number 22601 of the outer mesh is 2.0934 lGI for vertex number 22701 of the outer mesh is 2.3217 lGI for vertex number 22801 of the outer mesh is 2.042 lGI for vertex number 22901 of the outer mesh is 2.0116 lGI for vertex number 23001 of the outer mesh is 3.0728 lGI for vertex number 23101 of the outer mesh is 2.6302 lGI for vertex number 23201 of the outer mesh is 2.1501 lGI for vertex number 23301 of the outer mesh is 2.2528 lGI for vertex number 23401 of the outer mesh is 3.4359 lGI for vertex number 23501 of the outer mesh is 2.4631 lGI for vertex number 23601 of the outer mesh is 2.9885 lGI for vertex number 23701 of the outer mesh is 1.8798 lGI for vertex number 23801 of the outer mesh is 2.1279 lGI for vertex number 23901 of the outer mesh is 1.9299 lGI for vertex number 24001 of the outer mesh is 2.7498 lGI for vertex number 24101 of the outer mesh is 2.1036 lGI for vertex number 24201 of the outer mesh is 2.329 lGI for vertex number 24301 of the outer mesh is 3.3283 lGI for vertex number 24401 of the outer mesh is 2.3367 lGI for vertex number 24501 of the outer mesh is 2.2709 lGI for vertex number 24601 of the outer mesh is 2.2705 lGI for vertex number 24701 of the outer mesh is 2.0871 lGI for vertex number 24801 of the outer mesh is 3.0044 lGI for vertex number 24901 of the outer mesh is 2.3751 lGI for vertex number 25001 of the outer mesh is 2.2706 lGI for vertex number 25101 of the outer mesh is 2.8214 lGI for vertex number 25201 of the outer mesh is 3.2269 lGI for vertex number 25301 of the outer mesh is 2.8637 lGI for vertex number 25401 of the outer mesh is 2.6447 lGI for vertex number 25501 of the outer mesh is 2.9032 lGI for vertex number 25601 of the outer mesh is 2.1828 lGI for vertex number 25701 of the outer mesh is 2.0289 lGI for vertex number 25801 of the outer mesh is 2.4746 lGI for vertex number 25901 of the outer mesh is 2.5691 lGI for vertex number 26001 of the outer mesh is 1.9978 lGI for vertex number 26101 of the outer mesh is 2.3461 lGI for vertex number 26201 of the outer mesh is 3.0955 lGI for vertex number 26301 of the outer mesh is 2.5101 lGI for vertex number 26401 of the outer mesh is 2.5433 lGI for vertex number 26501 of the outer mesh is 2.0523 lGI for vertex number 26601 of the outer mesh is 2.1624 lGI for vertex number 26701 of the outer mesh is 2.8384 lGI for vertex number 26801 of the outer mesh is 2.6293 lGI for vertex number 26901 of the outer mesh is 1.8929 lGI for vertex number 27001 of the outer mesh is 2.9282 lGI for vertex number 27101 of the outer mesh is 1.9515 lGI for vertex number 27201 of the outer mesh is 2.6216 lGI for vertex number 27301 of the outer mesh is 2.9776 lGI for vertex number 27401 of the outer mesh is 2.5507 lGI for vertex number 27501 of the outer mesh is 2.1472 lGI for vertex number 27601 of the outer mesh is 1.9146 lGI for vertex number 27701 of the outer mesh is 2.4511 lGI for vertex number 27801 of the outer mesh is 1.7553 lGI for vertex number 27901 of the outer mesh is 2.3585 lGI for vertex number 28001 of the outer mesh is 1.9769 lGI for vertex number 28101 of the outer mesh is 2.6329 lGI for vertex number 28201 of the outer mesh is 2.822 lGI for vertex number 28301 of the outer mesh is 1.9681 lGI for vertex number 28401 of the outer mesh is 2.1288 lGI for vertex number 28501 of the outer mesh is 2.4963 lGI for vertex number 28601 of the outer mesh is 2.5795 lGI for vertex number 28701 of the outer mesh is 3.0217 lGI for vertex number 28801 of the outer mesh is 2.0503 lGI for vertex number 28901 of the outer mesh is 2.6478 lGI for vertex number 29001 of the outer mesh is 1.9211 lGI for vertex number 29101 of the outer mesh is 2.6536 lGI for vertex number 29201 of the outer mesh is 2.29 lGI for vertex number 29301 of the outer mesh is 2.0781 lGI for vertex number 29401 of the outer mesh is 2.6635 lGI for vertex number 29501 of the outer mesh is 2.7087 lGI for vertex number 29601 of the outer mesh is 2.2067 lGI for vertex number 29701 of the outer mesh is 1.9451 lGI for vertex number 29801 of the outer mesh is 2.5827 lGI for vertex number 29901 of the outer mesh is 1.9683 lGI for vertex number 30001 of the outer mesh is 2.1493 ratio saved at 30001 lGI for vertex number 30101 of the outer mesh is 2.9555 lGI for vertex number 30201 of the outer mesh is 2.5537 lGI for vertex number 30301 of the outer mesh is 1.7844 lGI for vertex number 30401 of the outer mesh is 2.5025 lGI for vertex number 30501 of the outer mesh is 1.6136 lGI for vertex number 30601 of the outer mesh is 2.506 lGI for vertex number 30701 of the outer mesh is 2.6052 lGI for vertex number 30801 of the outer mesh is 2.5312 lGI for vertex number 30901 of the outer mesh is 2.137 lGI for vertex number 31001 of the outer mesh is 2.7437 lGI for vertex number 31101 of the outer mesh is 2.4206 lGI for vertex number 31201 of the outer mesh is 1.983 lGI for vertex number 31301 of the outer mesh is 1.8679 lGI for vertex number 31401 of the outer mesh is 1.9542 lGI for vertex number 31501 of the outer mesh is 2.0665 lGI for vertex number 31601 of the outer mesh is 2.3176 lGI for vertex number 31701 of the outer mesh is 2.6839 lGI for vertex number 31801 of the outer mesh is 2.0867 lGI for vertex number 31901 of the outer mesh is 2.668 lGI for vertex number 32001 of the outer mesh is 2.535 lGI for vertex number 32101 of the outer mesh is 2.5743 lGI for vertex number 32201 of the outer mesh is 2.4915 lGI for vertex number 32301 of the outer mesh is 2.7858 lGI for vertex number 32401 of the outer mesh is 1.9915 lGI for vertex number 32501 of the outer mesh is 1.5999 lGI for vertex number 32601 of the outer mesh is 2.9991 lGI for vertex number 32701 of the outer mesh is 2.8494 lGI for vertex number 32801 of the outer mesh is 2.574 lGI for vertex number 32901 of the outer mesh is 2.6174 lGI for vertex number 33001 of the outer mesh is 2.8251 lGI for vertex number 33101 of the outer mesh is 3.2646 lGI for vertex number 33201 of the outer mesh is 2.4455 lGI for vertex number 33301 of the outer mesh is 2.5374 lGI for vertex number 33401 of the outer mesh is 2.2291 lGI for vertex number 33501 of the outer mesh is 2.1996 lGI for vertex number 33601 of the outer mesh is 2.7884 lGI for vertex number 33701 of the outer mesh is 2.864 lGI for vertex number 33801 of the outer mesh is 2.4128 lGI for vertex number 33901 of the outer mesh is 2.0482 lGI for vertex number 34001 of the outer mesh is 1.8462 lGI for vertex number 34101 of the outer mesh is 3.1623 lGI for vertex number 34201 of the outer mesh is 2.6588 lGI for vertex number 34301 of the outer mesh is 2.6855 lGI for vertex number 34401 of the outer mesh is 1.7196 lGI for vertex number 34501 of the outer mesh is 2.7386 lGI for vertex number 34601 of the outer mesh is 2.1876 lGI for vertex number 34701 of the outer mesh is 1.7816 lGI for vertex number 34801 of the outer mesh is 2.9627 lGI for vertex number 34901 of the outer mesh is 3.4258 lGI for vertex number 35001 of the outer mesh is 2.6984 lGI for vertex number 35101 of the outer mesh is 1.8291 lGI for vertex number 35201 of the outer mesh is 2.837 lGI for vertex number 35301 of the outer mesh is 3.4343 lGI for vertex number 35401 of the outer mesh is 2.7168 lGI for vertex number 35501 of the outer mesh is 2.8491 lGI for vertex number 35601 of the outer mesh is 2.574 lGI for vertex number 35701 of the outer mesh is 1.8926 lGI for vertex number 35801 of the outer mesh is 2.7576 lGI for vertex number 35901 of the outer mesh is 2.2048 lGI for vertex number 36001 of the outer mesh is 2.8787 lGI for vertex number 36101 of the outer mesh is 2.8374 lGI for vertex number 36201 of the outer mesh is 2.8394 lGI for vertex number 36301 of the outer mesh is 2.9746 lGI for vertex number 36401 of the outer mesh is 2.2488 lGI for vertex number 36501 of the outer mesh is 1.7386 lGI for vertex number 36601 of the outer mesh is 2.3878 lGI for vertex number 36701 of the outer mesh is 2.5917 lGI for vertex number 36801 of the outer mesh is 2.619 lGI for vertex number 36901 of the outer mesh is 2.5126 lGI for vertex number 37001 of the outer mesh is 3.5899 lGI for vertex number 37101 of the outer mesh is 1.8716 lGI for vertex number 37201 of the outer mesh is 1.9181 lGI for vertex number 37301 of the outer mesh is 2.8273 lGI for vertex number 37401 of the outer mesh is 3.2274 lGI for vertex number 37501 of the outer mesh is 2.0408 lGI for vertex number 37601 of the outer mesh is 2.5826 lGI for vertex number 37701 of the outer mesh is 2.0555 lGI for vertex number 37801 of the outer mesh is 3.0083 lGI for vertex number 37901 of the outer mesh is 3.116 lGI for vertex number 38001 of the outer mesh is 1.8515 lGI for vertex number 38101 of the outer mesh is 2.2209 lGI for vertex number 38201 of the outer mesh is 1.835 lGI for vertex number 38301 of the outer mesh is 1.655 lGI for vertex number 38401 of the outer mesh is 3.1444 lGI for vertex number 38501 of the outer mesh is 3.2301 lGI for vertex number 38601 of the outer mesh is 2.514 lGI for vertex number 38701 of the outer mesh is 2.2487 lGI for vertex number 38801 of the outer mesh is 2.5821 lGI for vertex number 38901 of the outer mesh is 2.4053 lGI for vertex number 39001 of the outer mesh is 1.794 lGI for vertex number 39101 of the outer mesh is 2.2079 lGI for vertex number 39201 of the outer mesh is 2.6604 lGI for vertex number 39301 of the outer mesh is 2.8294 lGI for vertex number 39401 of the outer mesh is 2.6182 lGI for vertex number 39501 of the outer mesh is 1.9294 lGI for vertex number 39601 of the outer mesh is 2.5378 lGI for vertex number 39701 of the outer mesh is 1.9751 lGI for vertex number 39801 of the outer mesh is 1.671 lGI for vertex number 39901 of the outer mesh is 2.766 lGI for vertex number 40001 of the outer mesh is 3.1105 ratio saved at 40001 lGI for vertex number 40101 of the outer mesh is 2.3217 lGI for vertex number 40201 of the outer mesh is 2.4402 lGI for vertex number 40301 of the outer mesh is 3.1007 lGI for vertex number 40401 of the outer mesh is 1.9737 lGI for vertex number 40501 of the outer mesh is 1.6329 lGI for vertex number 40601 of the outer mesh is 2.0916 lGI for vertex number 40701 of the outer mesh is 1.4508 lGI for vertex number 40801 of the outer mesh is 2.7013 lGI for vertex number 40901 of the outer mesh is 2.9895 lGI for vertex number 41001 of the outer mesh is 2.3949 lGI for vertex number 41101 of the outer mesh is 1.9076 lGI for vertex number 41201 of the outer mesh is 2.8059 ... remeasuring lGI value for vertex iV = 41301. It may take a few minutes. WARNING -- Problem for vertex iV = 41301, lGI value is aberrantly high (lGI=36.8465)... ...lGI computation will be stopped. This may be caused by topological defects, check mris_euler_number on the pial surface. ERROR: compute_lgi did not create output file '/home/yarkin/project_Alexeevskaya_preproc/freesurfer/january_2021/subject1/surf/tmp-mris_compute_lgi-rh.pial/rh.pial_lgi.asc'! Command exited with non-zero status 1 @#@FSTIME 2021:03:18:10:14:39 mris_compute_lgi N 2 e 2926.08 S 1370.65 U 9544.62 P 373% M 2047392 F 1 R 12463140 W 0 c 130698035 w 34933646 I 8304 O 460640 L 93 18 18 @#@FSLOADPOST 2021:03:18:11:03:25 mris_compute_lgi N 2 86 26 22 Linux Megatron 5.3.0-28-generic #30~18.04.1-Ubuntu SMP Fri Jan 17 06:14:09 UTC 2020 x86_64 x86_64 x86_64 GNU/Linux recon-all -s subject1 exited with ERRORS at Thu Mar 18 11:03:25 MSK 2021 To report a problem, see http://surfer.nmr.mgh.harvard.edu/fswiki/BugReporting