2 0 subjs: /work/fatx405/projects/2104_dwiproc_hchs/00_data/raw_bids/sub-control01 subjects_subarr: sub-control01 node309 singularity version 3.5.2 /sw/env/system-gcc/singularity/3.5.2-overlayfix/bin:/work/fatx405/software/mrtrix3/bin:/home/fatx405/bin:/work/fatx405/local/qt5/install/5.11.1/gcc_64/bin:/work/fatx405/local/htop/bin:/work/fatx405/local/ANTs/antsbin/bin:/work/fatx405/local/mrtrix-3.0/bin:/work/fatx405/local/freesurfer-6.0.0/bin:/work/fatx405/local/freesurfer-6.0.0/fsfast/bin:/work/fatx405/local/freesurfer-6.0.0/tktools:/work/fatx405/local/fsl-5.0.10/bin:/work/fatx405/local/freesurfer-6.0.0/mni/bin:/work/fatx405/local/fsl-5.0.10/bin:/work/fatx405/miniconda3/bin:/home/fatx405/.emacs.d/bin/:/work/fatx405/software/mrtrix3/bin:/home/fatx405/bin:/work/fatx405/local/qt5/install/5.11.1/gcc_64/bin:/work/fatx405/local/htop/bin:/work/fatx405/local/ANTs/antsbin/bin:/work/fatx405/local/mrtrix-3.0/bin:/work/fatx405/local/freesurfer-6.0.0/bin:/work/fatx405/local/freesurfer-6.0.0/fsfast/bin:/work/fatx405/local/freesurfer-6.0.0/tktools:/work/fatx405/local/fsl-5.0.10/bin:/work/fatx405/local/freesurfer-6.0.0/mni/bin:/work/fatx405/local/fsl-5.0.10/bin:/work/fatx405/miniconda3/bin:/home/fatx405/.emacs.d/bin/:/sw/batch/slurm/19.05.6/bin:/sw/rrz/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin singularity shell --cleanenv --no-home --userns -B /work/fatx405/projects/2104_dwiproc_hchs/02_env:/mnt -B /work/fatx405/projects/2104_dwiproc_hchs/00_data/raw_bids:/sngl/data -B /work/fatx405/projects/2104_dwiproc_hchs/00_data/derivatives:/sngl/out -B /work/fatx405/projects/2104_dwiproc_hchs/00_data/derivatives/qsiprep:/sngl/qsiprep-output -B /work/fatx405/projects/2104_dwiproc_hchs/00_data/intermediate:/sngl/scratch -B /work/fatx405/projects/2104_dwiproc_hchs/02_env:/sngl/env /work/fatx405/projects/2104_dwiproc_hchs/02_env/qsiprep-0.13.0RC1 /sngl/data /sngl/qsiprep-output participant -w /sngl/scratch/ --participant-label sub-control01 --recon_input /sngl/out/qsiprep --recon_spec mrtrix_singleshell_ss3t --fs-license-file /sngl/env/freesurfer_license.txt --output-resolution 1.3 --output-space T1w --use-syn-sdc -v 1: [WARN] The recommended file /README is missing. See Section 03 (Modality agnostic files) of the BIDS specification. (code: 101 - README_FILE_MISSING)  Please visit https://neurostars.org/search?q=README_FILE_MISSING for existing conversations about this issue. 2: [WARN] The Authors field of dataset_description.json should contain an array of fields - with one author per field. This was triggered based on the presence of only one author field. Please ignore if all contributors are already properly listed. (code: 102 - TOO_FEW_AUTHORS)  Please visit https://neurostars.org/search?q=TOO_FEW_AUTHORS for existing conversations about this issue. Summary: Available Tasks: Available Modalities: 13 Files, 61.03MB T1w 1 - Subject T2w 1 - Session dwi fieldmap  If you have any questions, please post on https://neurostars.org/tags/bids. Making sure the input data is BIDS compliant (warnings can be ignored in most cases). 210416-09:41:11,914 nipype.workflow INFO: Running with omp_nthreads=8, nthreads=32 210416-09:41:11,916 nipype.workflow IMPORTANT: Running qsiprep version 0.13.0RC1: * BIDS dataset path: /sngl/data. * Participant list: ['control01']. * Run identifier: 20210416-094111_6865a7b6-176e-4c40-807f-674909d16ce1. 210416-09:41:16,718 nipype.workflow INFO: Combining all 1 dwis within the single available session 210416-09:41:16,874 nipype.workflow INFO: [{'dwi_series': ['/sngl/data/sub-control01/dwi/sub-control01_dwi.nii.gz'], 'fieldmap_info': {'suffix': None}, 'dwi_series_pedir': 'j-', 'concatenated_bids_name': 'sub-control01'}] 210416-09:41:16,914 nipype.workflow IMPORTANT: Creating dwi processing workflow "dwi_preproc_wf" to produce output sub-control01 (1.04 GB / 75 DWIs). Memory resampled/largemem=1.17/1.21 GB. 210416-09:41:16,917 nipype.workflow INFO: Automatically using 5, 5, 5 window for dwidenoise 210416-09:41:16,980 nipype.workflow INFO: Using 8 threads in eddy 210416-09:41:29,683 nipype.workflow IMPORTANT: Works derived from this qsiprep execution should include the following boilerplate: Preprocessing was performed using *QSIPrep* 0.13.0RC1, which is based on *Nipype* 1.6.0 (@nipype1; @nipype2; RRID:SCR_002502). Anatomical data preprocessing : The T1-weighted (T1w) image was corrected for intensity non-uniformity (INU) using `N4BiasFieldCorrection` [@n4, ANTs 2.3.1], and used as T1w-reference throughout the workflow. The T1w-reference was then skull-stripped using `antsBrainExtraction.sh` (ANTs 2.3.1), using OASIS as target template. Spatial normalization to the ICBM 152 Nonlinear Asymmetrical template version 2009c [@mni, RRID:SCR_008796] was performed through nonlinear registration with `antsRegistration` [ANTs 2.3.1, RRID:SCR_004757, @ants], using brain-extracted versions of both T1w volume and template. Brain tissue segmentation of cerebrospinal fluid (CSF), white-matter (WM) and gray-matter (GM) was performed on the brain-extracted T1w using `FAST` [FSL 6.0.3:b862cdd5, RRID:SCR_002823, @fsl_fast]. Diffusion data preprocessing : Any images with a b-value less than 100 s/mm^2 were treated as a *b*=0 image. MP-PCA denoising as implemented in MRtrix3's `dwidenoise`[@dwidenoise1] was applied with a 5-voxel window. After MP-PCA, B1 field inhomogeneity was corrected using `dwibiascorrect` from MRtrix3 with the N4 algorithm [@n4]. After B1 bias correction, the mean intensity of the DWI series was adjusted so all the mean intensity of the b=0 images matched across eachseparate DWI scanning sequence. FSL (version 6.0.3:b862cdd5)'s eddy was used for head motion correction and Eddy current correction [@anderssoneddy]. Eddy was configured with a $q$-space smoothing factor of 10, a total of 5 iterations, and 1000 voxels used to estimate hyperparameters. A linear first level model and a linear second level model were used to characterize Eddy current-related spatial distortion. $q$-space coordinates were forcefully assigned to shells. Field offset was attempted to be separated from subject movement. Shells were aligned post-eddy. Eddy's outlier replacement was run [@eddyrepol]. Data were grouped by slice, only including values from slices determined to contain at least 250 intracerebral voxels. Groups deviating by more than 4 standard deviations from the prediction had their data replaced with imputed values. Final interpolation was performed using the `jac` method. Several confounding time-series were calculated based on the preprocessed DWI: framewise displacement (FD) using the implementation in *Nipype* [following the definitions by @power_fd_dvars]. The head-motion estimates calculated in the correction step were also placed within the corresponding confounds file. Slicewise cross correlation was also calculated. The DWI time-series were resampled to ACPC, generating a *preprocessed DWI run in ACPC space* with 1.3mm isotropic voxels. Many internal operations of *QSIPrep* use *Nilearn* 0.7.0 [@nilearn, RRID:SCR_001362] and *Dipy* [@dipy]. For more details of the pipeline, see [the section corresponding to workflows in *QSIPrep*'s documentation](https://qsiprep.readthedocs.io/en/latest/workflows.html "QSIPrep's documentation"). ### References 210416-09:41:39,952 nipype.workflow WARNING: Could not generate CITATION.html file: pandoc -s --bibliography /usr/local/miniconda/lib/python3.7/site-packages/qsiprep/data/boilerplate.bib --filter pandoc-citeproc /sngl/qsiprep-output/qsiprep/logs/CITATION.md -o /sngl/qsiprep-output/qsiprep/logs/CITATION.html 210416-09:41:52,74 nipype.workflow INFO: Workflow qsiprep_wf settings: ['check', 'execution', 'logging', 'monitoring'] 210416-09:41:52,305 nipype.workflow INFO: Running in parallel. 210416-09:41:52,476 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 6 jobs ready. Free memory (GB): 56.53/56.53, Free processors: 32/32. 210416-09:41:52,587 nipype.workflow INFO: [Job 0] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.bias_images). 210416-09:41:52,592 nipype.workflow INFO: [Job 1] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.noise_images). 210416-09:41:52,596 nipype.workflow INFO: [Job 2] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.conform_dwis01). 210416-09:41:52,599 nipype.workflow INFO: [Job 35] Cached (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.output_grid_wf.autobox_template). 210416-09:41:52,602 nipype.workflow INFO: [Job 38] Cached (qsiprep_wf.single_subject_control01_wf.about). 210416-09:41:52,606 nipype.workflow INFO: [Job 39] Cached (qsiprep_wf.single_subject_control01_wf.bidssrc). 210416-09:41:54,476 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 9 jobs ready. Free memory (GB): 56.53/56.53, Free processors: 32/32. 210416-09:41:54,594 nipype.workflow INFO: [Job 3] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.conformed_bvecs). 210416-09:41:54,602 nipype.workflow INFO: [Job 4] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.conformed_bvals). 210416-09:41:54,611 nipype.workflow INFO: [Job 5] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_dwi_wf.denoiser). 210416-09:41:54,619 nipype.workflow INFO: [Job 19] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.conformation_reports). 210416-09:41:54,626 nipype.workflow INFO: [Job 22] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.conformed_raw_images). 210416-09:41:54,653 nipype.workflow INFO: [Job 36] Cached (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.output_grid_wf.deoblique_autobox). 210416-09:41:54,661 nipype.workflow INFO: [Job 40] Cached (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_template_wf.t1_template_dimensions). !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! /sngl/data/sub-control01/anat 210416-09:41:54,694 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.ds_report_about" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/ds_report_about". 210416-09:41:54,719 nipype.workflow INFO: [Node] Running "ds_report_about" ("qsiprep.interfaces.bids.DerivativesDataSink") 210416-09:41:54,742 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.ds_report_about". 210416-09:41:54,742 nipype.workflow INFO: [Job 123] Completed (qsiprep_wf.single_subject_control01_wf.ds_report_about). !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! /sngl/data/sub-control01/anat 210416-09:41:54,841 nipype.workflow INFO: [Job 124] Cached (qsiprep_wf.single_subject_control01_wf.bids_info). 210416-09:41:56,478 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 10 jobs ready. Free memory (GB): 56.53/56.53, Free processors: 32/32. 210416-09:41:56,598 nipype.workflow INFO: [Job 6] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_dwi_wf.get_b0s). 210416-09:41:56,608 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_dwi_wf.ds_report_dwi_denoise_dwi_wf_denoising" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_denoise_dwi_wf/ds_report_dwi_denoise_dwi_wf_denoising". 210416-09:41:56,628 nipype.workflow INFO: [Node] Running "ds_report_dwi_denoise_dwi_wf_denoising" ("qsiprep.interfaces.bids.DerivativesDataSink") 210416-09:41:56,987 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_dwi_wf.ds_report_dwi_denoise_dwi_wf_denoising". 210416-09:41:56,988 nipype.workflow INFO: [Job 18] Completed (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_dwi_wf.ds_report_dwi_denoise_dwi_wf_denoising). 210416-09:41:57,120 nipype.workflow INFO: [Job 20] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.summary). 210416-09:41:57,158 nipype.workflow INFO: [Job 23] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.raw_merge). 210416-09:41:57,221 nipype.workflow INFO: [Job 37] Cached (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.output_grid_wf.resample_to_voxel_size). 210416-09:41:57,250 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_reports_wf.ds_t1_conform_report" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/anat_reports_wf/ds_t1_conform_report". 210416-09:41:57,277 nipype.workflow INFO: [Node] Running "ds_t1_conform_report" ("qsiprep.workflows.anatomical.DerivativesDataSink") 210416-09:41:57,317 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_reports_wf.ds_t1_conform_report". 210416-09:41:57,318 nipype.workflow INFO: [Job 41] Completed (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_reports_wf.ds_t1_conform_report). 210416-09:41:57,437 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_template_transforms" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/anat_derivatives_wf/ds_t1_template_transforms". 210416-09:41:57,459 nipype.workflow INFO: [Node] Setting-up "_ds_t1_template_transforms0" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/anat_derivatives_wf/ds_t1_template_transforms/mapflow/_ds_t1_template_transforms0". 210416-09:41:57,481 nipype.workflow INFO: [Node] Running "_ds_t1_template_transforms0" ("qsiprep.workflows.anatomical.DerivativesDataSink") 210416-09:41:57,502 nipype.workflow INFO: [Node] Finished "_ds_t1_template_transforms0". 210416-09:41:57,508 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_template_transforms". 210416-09:41:57,508 nipype.workflow INFO: [Job 42] Completed (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_template_transforms). 210416-09:41:57,608 nipype.workflow INFO: [Job 43] Cached (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.t1_name). 210416-09:41:57,617 nipype.workflow INFO: [Job 44] Cached (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_template_wf.t1_conform). 210416-09:41:57,650 nipype.workflow INFO: [Job 125] Cached (qsiprep_wf.single_subject_control01_wf.summary). 210416-09:41:58,479 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 5 jobs ready. Free memory (GB): 56.53/56.53, Free processors: 32/32. 210416-09:41:58,592 nipype.workflow INFO: [Job 7] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_dwi_wf.quick_mask). 210416-09:41:58,615 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.ds_report_summary" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/ds_report_summary". 210416-09:41:58,631 nipype.workflow INFO: [Node] Running "ds_report_summary" ("qsiprep.interfaces.bids.DerivativesDataSink") 210416-09:41:58,653 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.ds_report_summary". 210416-09:41:58,654 nipype.workflow INFO: [Job 21] Completed (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.ds_report_summary). 210416-09:41:58,753 nipype.workflow INFO: [Job 24] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.test_pre_hmc_connect). 210416-09:41:58,764 nipype.workflow INFO: [Job 45] Cached (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.skullstrip_wf.t1_skull_strip). !!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!!! /sngl/data/sub-control01/anat 210416-09:41:58,794 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.ds_report_summary" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/ds_report_summary". 210416-09:41:58,810 nipype.workflow INFO: [Node] Running "ds_report_summary" ("qsiprep.interfaces.bids.DerivativesDataSink") 210416-09:41:58,858 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.ds_report_summary". 210416-09:41:58,858 nipype.workflow INFO: [Job 126] Completed (qsiprep_wf.single_subject_control01_wf.ds_report_summary). 210416-09:42:00,480 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 2 jobs ready. Free memory (GB): 56.53/56.53, Free processors: 32/32. 210416-09:42:00,621 nipype.workflow INFO: [Job 8] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_dwi_wf.biascorr). 210416-09:42:00,640 nipype.workflow INFO: [Job 46] Cached (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.skullstrip_wf.rigid_acpc_align). 210416-09:42:02,482 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 7 jobs ready. Free memory (GB): 56.53/56.53, Free processors: 32/32. 210416-09:42:02,597 nipype.workflow INFO: [Job 9] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.conformed_images). 210416-09:42:02,609 nipype.workflow INFO: [Job 10] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_dwi_wf.merge_confounds). 210416-09:42:02,619 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_dwi_wf.ds_report_dwi_denoise_dwi_wf_biascorr" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_denoise_dwi_wf/ds_report_dwi_denoise_dwi_wf_biascorr". 210416-09:42:02,633 nipype.workflow INFO: [Node] Running "ds_report_dwi_denoise_dwi_wf_biascorr" ("qsiprep.interfaces.bids.DerivativesDataSink") 210416-09:42:02,686 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_dwi_wf.ds_report_dwi_denoise_dwi_wf_biascorr". 210416-09:42:02,687 nipype.workflow INFO: [Job 17] Completed (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_dwi_wf.ds_report_dwi_denoise_dwi_wf_biascorr). 210416-09:42:02,796 nipype.workflow INFO: [Job 47] Cached (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.skullstrip_wf.rigid_acpc_resample_seg). 210416-09:42:02,812 nipype.workflow INFO: [Job 48] Cached (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.skullstrip_wf.rigid_acpc_resample_mask). 210416-09:42:02,827 nipype.workflow INFO: [Job 50] Cached (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.skullstrip_wf.rigid_acpc_resample_head). 210416-09:42:02,843 nipype.workflow INFO: [Job 59] Cached (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.skullstrip_wf.rigid_acpc_resample_brain). 210416-09:42:04,484 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 5 jobs ready. Free memory (GB): 56.53/56.53, Free processors: 32/32. 210416-09:42:04,585 nipype.workflow INFO: [Job 11] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_denoise_dwi_wf.hstack_confounds). 210416-09:42:04,595 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_mask" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/anat_derivatives_wf/ds_t1_mask". 210416-09:42:04,610 nipype.workflow INFO: [Node] Running "ds_t1_mask" ("qsiprep.workflows.anatomical.DerivativesDataSink") 210416-09:42:04,630 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_mask". 210416-09:42:04,631 nipype.workflow INFO: [Job 49] Completed (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_mask). 210416-09:42:04,732 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_preproc" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/anat_derivatives_wf/ds_t1_preproc". 210416-09:42:04,748 nipype.workflow INFO: [Node] Running "ds_t1_preproc" ("qsiprep.workflows.anatomical.DerivativesDataSink") 210416-09:42:05,152 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_preproc". 210416-09:42:05,152 nipype.workflow INFO: [Job 51] Completed (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_preproc). 210416-09:42:05,283 nipype.workflow INFO: [Job 113] Cached (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_seg). 210416-09:42:06,507 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 4 jobs ready. Free memory (GB): 54.53/56.53, Free processors: 24/32. Currently running: * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-09:42:06,676 nipype.workflow INFO: [Job 12] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.denoising_confounds). 210416-09:42:06,710 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_tpms" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/anat_derivatives_wf/ds_t1_tpms". 210416-09:42:06,736 nipype.workflow INFO: [Node] Running "ds_t1_tpms" ("qsiprep.workflows.anatomical.DerivativesDataSink") 210416-09:42:06,894 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_tpms". 210416-09:42:06,896 nipype.workflow INFO: [Job 114] Completed (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_tpms). 210416-09:42:07,18 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_seg" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/anat_derivatives_wf/ds_t1_seg". 210416-09:42:07,36 nipype.workflow INFO: [Node] Running "ds_t1_seg" ("qsiprep.workflows.anatomical.DerivativesDataSink") 210416-09:42:07,70 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_seg". 210416-09:42:07,72 nipype.workflow INFO: [Job 115] Completed (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_seg). 210416-09:42:07,194 nipype.workflow INFO: [Job 116] Cached (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.seg2msks). 210416-09:42:08,492 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 2 jobs ready. Free memory (GB): 54.53/56.53, Free processors: 24/32. Currently running: * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-09:42:09,134 nipype.workflow INFO: [Job 13] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.merge_dwis). 210416-09:42:09,153 nipype.workflow INFO: [Job 117] Cached (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.seg_rpt). 210416-09:42:10,494 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 4 jobs ready. Free memory (GB): 54.53/56.53, Free processors: 24/32. Currently running: * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-09:42:10,669 nipype.workflow INFO: [Job 14] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.gather_inputs). 210416-09:42:10,684 nipype.workflow INFO: [Job 25] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.dwi_qc_wf.raw_src). 210416-09:42:10,695 nipype.workflow INFO: [Job 30] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.raw_src). 210416-09:42:10,761 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_reports_wf.ds_t1_seg_mask_report" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/anat_reports_wf/ds_t1_seg_mask_report". 210416-09:42:10,896 nipype.workflow INFO: [Node] Running "ds_t1_seg_mask_report" ("qsiprep.workflows.anatomical.DerivativesDataSink") 210416-09:42:10,908 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_reports_wf.ds_t1_seg_mask_report". 210416-09:42:10,908 nipype.workflow INFO: [Job 118] Completed (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_reports_wf.ds_t1_seg_mask_report). 210416-09:42:12,492 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 6 jobs ready. Free memory (GB): 54.53/56.53, Free processors: 24/32. Currently running: * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-09:42:12,594 nipype.workflow INFO: [Job 15] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.distorted_merge). 210416-09:42:12,602 nipype.workflow INFO: [Job 16] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.enhance_pre_sdc). 210416-09:42:12,607 nipype.workflow INFO: [Job 26] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.dwi_qc_wf.raw_gqi). 210416-09:42:12,618 nipype.workflow INFO: [Job 31] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.raw_gqi). 210416-09:42:14,11 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/t1_2_mni". 210416-09:42:14,495 nipype.workflow INFO: [MultiProc] Running 3 tasks, and 3 jobs ready. Free memory (GB): 54.13/56.53, Free processors: 22/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.raw_src_qc * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.dwi_qc_wf.raw_src_qc * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-09:42:14,688 nipype.workflow INFO: [Job 60] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.pre_eddy_b0_ref_wf.register_t1_to_raw). 210416-09:42:16,496 nipype.workflow INFO: [MultiProc] Running 5 tasks, and 1 jobs ready. Free memory (GB): 53.73/56.53, Free processors: 20/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.raw_fib_qc * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.dwi_qc_wf.raw_fib_qc * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.raw_src_qc * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.dwi_qc_wf.raw_src_qc * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-09:42:16,608 nipype.workflow INFO: [Job 61] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.pre_eddy_b0_ref_wf.t1_mask_to_b0). 210416-09:42:17,869 nipype.workflow INFO: [Node] Running "t1_2_mni" ("qsiprep.niworkflows.interfaces.registration.RobustMNINormalizationRPT") 210416-09:42:18,613 nipype.workflow INFO: [Job 62] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.pre_eddy_b0_ref_wf.enhance_and_mask_b0). 210416-09:42:20,500 nipype.workflow INFO: [MultiProc] Running 5 tasks, and 4 jobs ready. Free memory (GB): 53.73/56.53, Free processors: 20/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.raw_fib_qc * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.dwi_qc_wf.raw_fib_qc * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.raw_src_qc * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.dwi_qc_wf.raw_src_qc * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-09:42:20,604 nipype.workflow INFO: [Job 63] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.b0_ref_brain_to_lps). 210416-09:42:20,615 nipype.workflow INFO: [Job 74] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.b0_ref_mask_to_lps). 210416-09:42:20,622 nipype.workflow INFO: [Job 78] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.b0_ref_to_lps). 210416-09:42:20,899 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.raw_src_qc" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_qc_wf/raw_src_qc". 210416-09:42:20,902 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.dwi_qc_wf.raw_src_qc" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/pre_hmc_wf/dwi_qc_wf/raw_src_qc". 210416-09:42:21,205 nipype.workflow INFO: [Node] Running "raw_src_qc" ("qsiprep.interfaces.dsi_studio.DSIStudioSrcQC") 210416-09:42:21,205 nipype.workflow INFO: [Node] Running "raw_src_qc" ("qsiprep.interfaces.dsi_studio.DSIStudioSrcQC") 210416-09:42:21,217 nipype.workflow WARNING: Storing result file without outputs 210416-09:42:21,218 nipype.workflow WARNING: Storing result file without outputs 210416-09:42:21,221 nipype.workflow WARNING: [Node] Error on "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.dwi_qc_wf.raw_src_qc" (/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/pre_hmc_wf/dwi_qc_wf/raw_src_qc) 210416-09:42:21,221 nipype.workflow WARNING: [Node] Error on "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.raw_src_qc" (/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_qc_wf/raw_src_qc) 210416-09:42:22,505 nipype.workflow ERROR: Node raw_src_qc failed to run on host node309. 210416-09:42:22,529 nipype.workflow ERROR: Saving crash info to /sngl/qsiprep-output/qsiprep/sub-control01/log/20210416-094111_6865a7b6-176e-4c40-807f-674909d16ce1/crash-20210416-094222-fatx405-raw_src_qc-8f455aeb-590c-4cc6-b3ab-e71cfb9ca67a.txt Traceback (most recent call last): File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node result["result"] = node.run(updatehash=updatehash) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run result = self._run_interface(execute=True) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 635, in _run_interface return self._run_command(execute) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 741, in _run_command result = self._interface.run(cwd=outdir) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/interfaces/base/core.py", line 434, in run runtime = self._run_interface(runtime) File "/usr/local/miniconda/lib/python3.7/site-packages/qsiprep/interfaces/dsi_studio.py", line 108, in _run_interface os.link(self.inputs.src_file, linked_src_file) PermissionError: [Errno 1] Operation not permitted: '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/pre_hmc_wf/dwi_qc_wf/raw_src_qc/sub-control01_dwi_merged.src.gz' -> '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/pre_hmc_wf/dwi_qc_wf/raw_src_qc/src_qc/sub-control01_dwi_merged.src.gz' 210416-09:42:22,542 nipype.workflow ERROR: Node raw_src_qc failed to run on host node309. 210416-09:42:22,549 nipype.workflow ERROR: Saving crash info to /sngl/qsiprep-output/qsiprep/sub-control01/log/20210416-094111_6865a7b6-176e-4c40-807f-674909d16ce1/crash-20210416-094222-fatx405-raw_src_qc-979b9de1-8ed0-4a3b-94fa-63f0b1ed02e0.txt Traceback (most recent call last): File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node result["result"] = node.run(updatehash=updatehash) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run result = self._run_interface(execute=True) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 635, in _run_interface return self._run_command(execute) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 741, in _run_command result = self._interface.run(cwd=outdir) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/interfaces/base/core.py", line 434, in run runtime = self._run_interface(runtime) File "/usr/local/miniconda/lib/python3.7/site-packages/qsiprep/interfaces/dsi_studio.py", line 108, in _run_interface os.link(self.inputs.src_file, linked_src_file) PermissionError: [Errno 1] Operation not permitted: '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_qc_wf/raw_src_qc/sub-control01_dwi_merged.src.gz' -> '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_qc_wf/raw_src_qc/src_qc/sub-control01_dwi_merged.src.gz' 210416-09:42:22,559 nipype.workflow INFO: [MultiProc] Running 4 tasks, and 1 jobs ready. Free memory (GB): 53.93/56.53, Free processors: 14/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.eddy * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.raw_fib_qc * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.dwi_qc_wf.raw_fib_qc * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-09:42:22,671 nipype.workflow INFO: [Job 79] Cached (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.b0_anat_coreg.b0_to_anat). 210416-09:42:23,140 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.dwi_qc_wf.raw_fib_qc" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/pre_hmc_wf/dwi_qc_wf/raw_fib_qc". 210416-09:42:23,140 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.raw_fib_qc" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_qc_wf/raw_fib_qc". 210416-09:42:23,154 nipype.workflow INFO: [Node] Running "raw_fib_qc" ("qsiprep.interfaces.dsi_studio.DSIStudioFibQC") 210416-09:42:23,157 nipype.workflow INFO: [Node] Running "raw_fib_qc" ("qsiprep.interfaces.dsi_studio.DSIStudioFibQC") 210416-09:42:23,162 nipype.workflow WARNING: Storing result file without outputs 210416-09:42:23,164 nipype.workflow WARNING: Storing result file without outputs 210416-09:42:23,164 nipype.workflow WARNING: [Node] Error on "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.raw_fib_qc" (/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_qc_wf/raw_fib_qc) 210416-09:42:23,167 nipype.workflow WARNING: [Node] Error on "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.dwi_qc_wf.raw_fib_qc" (/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/pre_hmc_wf/dwi_qc_wf/raw_fib_qc) 210416-09:42:24,507 nipype.workflow ERROR: Node raw_fib_qc failed to run on host node309. 210416-09:42:24,515 nipype.workflow ERROR: Saving crash info to /sngl/qsiprep-output/qsiprep/sub-control01/log/20210416-094111_6865a7b6-176e-4c40-807f-674909d16ce1/crash-20210416-094224-fatx405-raw_fib_qc-4ab27afb-a573-47b0-a2c3-6cf905b4906a.txt Traceback (most recent call last): File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node result["result"] = node.run(updatehash=updatehash) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run result = self._run_interface(execute=True) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 635, in _run_interface return self._run_command(execute) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 741, in _run_command result = self._interface.run(cwd=outdir) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/interfaces/base/core.py", line 434, in run runtime = self._run_interface(runtime) File "/usr/local/miniconda/lib/python3.7/site-packages/qsiprep/interfaces/dsi_studio.py", line 135, in _run_interface os.link(self.inputs.fib_file, linked_fib_file) PermissionError: [Errno 1] Operation not permitted: '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/pre_hmc_wf/dwi_qc_wf/raw_gqi/sub-control01_dwi_merged.src.gz.odf.gqi.1.25.fib.gz' -> '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/pre_hmc_wf/dwi_qc_wf/raw_fib_qc/sub-control01_dwi_merged.src.gz.odf.gqi.1.25.fib.gz' 210416-09:42:24,526 nipype.workflow ERROR: Node raw_fib_qc failed to run on host node309. 210416-09:42:24,532 nipype.workflow ERROR: Saving crash info to /sngl/qsiprep-output/qsiprep/sub-control01/log/20210416-094111_6865a7b6-176e-4c40-807f-674909d16ce1/crash-20210416-094224-fatx405-raw_fib_qc-9657f9f5-d924-473d-b06a-4fd04adc41e6.txt Traceback (most recent call last): File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node result["result"] = node.run(updatehash=updatehash) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run result = self._run_interface(execute=True) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 635, in _run_interface return self._run_command(execute) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 741, in _run_command result = self._interface.run(cwd=outdir) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/interfaces/base/core.py", line 434, in run runtime = self._run_interface(runtime) File "/usr/local/miniconda/lib/python3.7/site-packages/qsiprep/interfaces/dsi_studio.py", line 135, in _run_interface os.link(self.inputs.fib_file, linked_fib_file) PermissionError: [Errno 1] Operation not permitted: '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_qc_wf/raw_gqi/sub-control01_dwi_merged.src.gz.odf.gqi.1.25.fib.gz' -> '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_qc_wf/raw_fib_qc/sub-control01_dwi_merged.src.gz.odf.gqi.1.25.fib.gz' 210416-09:42:24,543 nipype.workflow INFO: [MultiProc] Running 2 tasks, and 1 jobs ready. Free memory (GB): 54.33/56.53, Free processors: 16/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.eddy * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-09:42:24,644 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.ds_report_coreg" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/ds_report_coreg". 210416-09:42:24,659 nipype.workflow INFO: [Node] Running "ds_report_coreg" ("qsiprep.interfaces.bids.DerivativesDataSink") 210416-09:42:24,701 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.ds_report_coreg". 210416-09:42:24,702 nipype.workflow INFO: [Job 112] Completed (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.ds_report_coreg). 210416-09:42:26,506 nipype.workflow INFO: [MultiProc] Running 2 tasks, and 0 jobs ready. Free memory (GB): 54.33/56.53, Free processors: 16/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.eddy * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-09:42:29,495 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.eddy" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/eddy". 210416-09:42:29,562 nipype.workflow INFO: [Node] Running "eddy" ("qsiprep.interfaces.eddy.ExtendedEddy"), a CommandLine Interface with command: eddy_openmp --cnr_maps --flm=linear --ff=10.0 --acqp=/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/gather_inputs/eddy_acqp.txt --bvals=/sngl/data/sub-control01/dwi/sub-control01_dwi.bval --bvecs=/sngl/data/sub-control01/dwi/sub-control01_dwi.bvec --imain=/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/pre_hmc_wf/merge_and_denoise_wf/dwi_denoise_dwi_wf/biascorr/sub-control01_dwi_denoised_N4.nii.gz --index=/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/gather_inputs/eddy_index.txt --mask=/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/pre_eddy_b0_ref_wf/enhance_and_mask_b0/topup_imain_mask.nii.gz --interp=spline --data_is_shelled --resamp=jac --niter=5 --nvoxhp=1000 --out=/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/eddy/eddy_corrected --repol --slm=linear 210416-10:13:04,352 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.eddy". 210416-10:13:06,299 nipype.workflow INFO: [Job 64] Completed (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.eddy). 210416-10:13:06,302 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 3 jobs ready. Free memory (GB): 54.53/56.53, Free processors: 24/32. Currently running: * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:13:08,303 nipype.workflow INFO: [MultiProc] Running 4 tasks, and 0 jobs ready. Free memory (GB): 53.93/56.53, Free processors: 21/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.back_to_lps * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.cnr_lps * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.spm_motion * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:13:15,439 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.cnr_lps" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/cnr_lps". 210416-10:13:15,451 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.back_to_lps" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/back_to_lps". 210416-10:13:15,455 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.spm_motion" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/spm_motion". 210416-10:13:15,464 nipype.workflow INFO: [Node] Running "cnr_lps" ("qsiprep.interfaces.images.ConformDwi") 210416-10:13:15,473 nipype.workflow INFO: [Node] Running "spm_motion" ("qsiprep.interfaces.eddy.Eddy2SPMMotion") 210416-10:13:15,494 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.spm_motion". 210416-10:13:15,501 nipype.workflow INFO: [Node] Running "back_to_lps" ("qsiprep.interfaces.images.ConformDwi") 210416-10:13:16,309 nipype.workflow INFO: [Job 65] Completed (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.spm_motion). 210416-10:13:16,313 nipype.workflow INFO: [MultiProc] Running 3 tasks, and 2 jobs ready. Free memory (GB): 54.13/56.53, Free processors: 22/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.back_to_lps * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.cnr_lps * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:13:16,410 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.confounds_wf.add_motion_headers" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/confounds_wf/add_motion_headers". 210416-10:13:16,429 nipype.workflow INFO: [Node] Running "add_motion_headers" ("qsiprep.interfaces.utils.AddTSVHeader") 210416-10:13:16,445 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.confounds_wf.add_motion_headers". 210416-10:13:16,446 nipype.workflow INFO: [Job 66] Completed (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.confounds_wf.add_motion_headers). 210416-10:13:16,870 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.confounds_wf.fdisp" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/confounds_wf/fdisp". 210416-10:13:17,50 nipype.interface INFO: Re-orienting /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/eddy/eddy_corrected.eddy_cnr_maps.nii.gz to LPS 210416-10:13:18,187 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.cnr_lps". 210416-10:13:18,312 nipype.workflow INFO: [Job 70] Completed (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.cnr_lps). 210416-10:13:18,315 nipype.workflow INFO: [MultiProc] Running 3 tasks, and 0 jobs ready. Free memory (GB): 53.16/56.53, Free processors: 22/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.confounds_wf.fdisp * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.back_to_lps * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:13:26,191 nipype.workflow INFO: [Node] Running "fdisp" ("nipype.algorithms.confounds.FramewiseDisplacement") 210416-10:13:26,213 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.confounds_wf.fdisp". 210416-10:13:26,319 nipype.workflow INFO: [Job 67] Completed (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.confounds_wf.fdisp). 210416-10:13:26,322 nipype.workflow INFO: [MultiProc] Running 2 tasks, and 1 jobs ready. Free memory (GB): 54.33/56.53, Free processors: 23/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.back_to_lps * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:13:26,404 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.confounds_wf.concat" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/confounds_wf/concat". 210416-10:13:26,495 nipype.workflow INFO: [Node] Running "concat" ("qsiprep.interfaces.confounds.GatherConfounds") 210416-10:13:26,952 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.confounds_wf.concat". 210416-10:13:26,952 nipype.workflow INFO: [Job 68] Completed (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.confounds_wf.concat). 210416-10:13:28,321 nipype.workflow INFO: [MultiProc] Running 2 tasks, and 2 jobs ready. Free memory (GB): 54.33/56.53, Free processors: 23/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.back_to_lps * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:13:28,403 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.ds_confounds" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/ds_confounds". 210416-10:13:28,422 nipype.workflow INFO: [Node] Running "ds_confounds" ("qsiprep.interfaces.bids.DerivativesDataSink") 210416-10:13:28,515 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.ds_confounds". 210416-10:13:28,516 nipype.workflow INFO: [Job 69] Completed (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.ds_confounds). 210416-10:13:30,324 nipype.workflow INFO: [MultiProc] Running 3 tasks, and 0 jobs ready. Free memory (GB): 53.16/56.53, Free processors: 22/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.conf_plot * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.back_to_lps * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:13:30,666 nipype.interface INFO: Re-orienting /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/eddy/eddy_corrected.nii.gz to LPS 210416-10:13:37,282 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.conf_plot" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/conf_plot". 210416-10:13:37,353 nipype.workflow INFO: [Node] Running "conf_plot" ("qsiprep.interfaces.confounds.DMRISummary") 210416-10:13:39,407 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.conf_plot". 210416-10:13:40,332 nipype.workflow INFO: [Job 75] Completed (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.conf_plot). 210416-10:13:40,335 nipype.workflow INFO: [MultiProc] Running 2 tasks, and 2 jobs ready. Free memory (GB): 54.33/56.53, Free processors: 23/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.back_to_lps * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:13:40,417 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.ds_carpetplot" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/ds_carpetplot". 210416-10:13:40,439 nipype.workflow INFO: [Node] Running "ds_carpetplot" ("qsiprep.interfaces.bids.DerivativesDataSink") 210416-10:13:40,460 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.ds_carpetplot". 210416-10:13:40,461 nipype.workflow INFO: [Job 76] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.ds_carpetplot). 210416-10:13:40,543 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.ds_report_dwi_conf" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/ds_report_dwi_conf". 210416-10:13:40,561 nipype.workflow INFO: [Node] Running "ds_report_dwi_conf" ("qsiprep.interfaces.bids.DerivativesDataSink") 210416-10:13:40,580 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.ds_report_dwi_conf". 210416-10:13:40,581 nipype.workflow INFO: [Job 77] Completed (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.ds_report_dwi_conf). 210416-10:13:42,334 nipype.workflow INFO: [MultiProc] Running 2 tasks, and 0 jobs ready. Free memory (GB): 54.33/56.53, Free processors: 23/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.back_to_lps * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:13:44,895 nipype.interface INFO: Reorienting /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/eddy/eddy_corrected.eddy_rotated_bvecs to LPS 210416-10:13:44,922 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.back_to_lps". 210416-10:13:46,337 nipype.workflow INFO: [Job 71] Completed (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.back_to_lps). 210416-10:13:46,340 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 1 jobs ready. Free memory (GB): 54.53/56.53, Free processors: 24/32. Currently running: * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:13:48,346 nipype.workflow INFO: [MultiProc] Running 2 tasks, and 0 jobs ready. Free memory (GB): 54.33/56.53, Free processors: 23/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.split_eddy_lps * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:13:55,440 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.split_eddy_lps" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps". 210416-10:13:55,461 nipype.workflow INFO: [Node] Running "split_eddy_lps" ("qsiprep.interfaces.images.SplitDWIs") 210416-10:14:14,258 nipype.interface INFO: Converting oblique-image bvecs to workd coordinate reference frame 210416-10:14:15,470 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0000eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0000.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0000.nii.gz 210416-10:14:15,652 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0001eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0001.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0001.nii.gz 210416-10:14:15,808 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0002eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0002.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0002.nii.gz 210416-10:14:15,974 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0003eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0003.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0003.nii.gz 210416-10:14:16,140 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0004eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0004.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0004.nii.gz 210416-10:14:16,307 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0005eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0005.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0005.nii.gz 210416-10:14:16,504 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0006eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0006.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0006.nii.gz 210416-10:14:16,671 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0007eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0007.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0007.nii.gz 210416-10:14:16,828 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0008eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0008.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0008.nii.gz 210416-10:14:17,4 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0009eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0009.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0009.nii.gz 210416-10:14:17,179 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0010eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0010.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0010.nii.gz 210416-10:14:17,345 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0011eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0011.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0011.nii.gz 210416-10:14:17,513 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0012eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0012.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0012.nii.gz 210416-10:14:17,711 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0013eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0013.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0013.nii.gz 210416-10:14:17,898 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0014eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0014.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0014.nii.gz 210416-10:14:18,69 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0015eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0015.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0015.nii.gz 210416-10:14:18,234 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0016eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0016.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0016.nii.gz 210416-10:14:18,389 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0017eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0017.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0017.nii.gz 210416-10:14:18,550 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0018eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0018.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0018.nii.gz 210416-10:14:18,710 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0019eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0019.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0019.nii.gz 210416-10:14:18,881 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0020eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0020.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0020.nii.gz 210416-10:14:19,57 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0021eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0021.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0021.nii.gz 210416-10:14:19,245 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0022eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0022.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0022.nii.gz 210416-10:14:19,430 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0023eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0023.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0023.nii.gz 210416-10:14:19,615 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0024eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0024.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0024.nii.gz 210416-10:14:19,801 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0025eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0025.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0025.nii.gz 210416-10:14:19,968 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0026eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0026.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0026.nii.gz 210416-10:14:20,132 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0027eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0027.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0027.nii.gz 210416-10:14:20,297 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0028eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0028.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0028.nii.gz 210416-10:14:20,461 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0029eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0029.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0029.nii.gz 210416-10:14:20,629 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0030eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0030.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0030.nii.gz 210416-10:14:20,795 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0031eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0031.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0031.nii.gz 210416-10:14:20,942 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0032eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0032.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0032.nii.gz 210416-10:14:21,106 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0033eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0033.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0033.nii.gz 210416-10:14:21,287 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0034eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0034.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0034.nii.gz 210416-10:14:21,466 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0035eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0035.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0035.nii.gz 210416-10:14:21,651 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0036eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0036.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0036.nii.gz 210416-10:14:21,826 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0037eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0037.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0037.nii.gz 210416-10:14:21,998 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0038eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0038.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0038.nii.gz 210416-10:14:22,166 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0039eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0039.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0039.nii.gz 210416-10:14:22,335 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0040eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0040.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0040.nii.gz 210416-10:14:22,502 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0041eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0041.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0041.nii.gz 210416-10:14:22,679 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0042eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0042.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0042.nii.gz 210416-10:14:22,855 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0043eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0043.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0043.nii.gz 210416-10:14:23,43 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0044eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0044.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0044.nii.gz 210416-10:14:23,221 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0045eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0045.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0045.nii.gz 210416-10:14:23,396 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0046eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0046.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0046.nii.gz 210416-10:14:23,576 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0047eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0047.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0047.nii.gz 210416-10:14:23,746 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0048eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0048.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0048.nii.gz 210416-10:14:23,916 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0049eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0049.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0049.nii.gz 210416-10:14:24,95 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0050eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0050.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0050.nii.gz 210416-10:14:24,278 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0051eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0051.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0051.nii.gz 210416-10:14:24,448 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0052eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0052.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0052.nii.gz 210416-10:14:24,627 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0053eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0053.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0053.nii.gz 210416-10:14:24,809 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0054eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0054.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0054.nii.gz 210416-10:14:24,989 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0055eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0055.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0055.nii.gz 210416-10:14:25,164 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0056eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0056.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0056.nii.gz 210416-10:14:25,343 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0057eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0057.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0057.nii.gz 210416-10:14:25,525 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0058eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0058.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0058.nii.gz 210416-10:14:25,688 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0059eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0059.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0059.nii.gz 210416-10:14:25,850 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0060eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0060.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0060.nii.gz 210416-10:14:26,12 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0061eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0061.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0061.nii.gz 210416-10:14:26,181 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0062eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0062.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0062.nii.gz 210416-10:14:26,379 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0063eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0063.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0063.nii.gz 210416-10:14:26,551 nipype.interface INFO: /opt/3Tissue/bin/mrinfo -dwgrad -fslgrad /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/_0064eddy_corrected_LPS_fix.eddy_rotated_bvecs /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/sub-control01_dwi_0064.bval /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0064.nii.gz 210416-10:14:26,768 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.split_eddy_lps". 210416-10:14:28,384 nipype.workflow INFO: [Job 72] Completed (qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.hmc_sdc_wf.split_eddy_lps). 210416-10:14:28,387 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 2 jobs ready. Free memory (GB): 54.53/56.53, Free processors: 24/32. Currently running: * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:14:30,387 nipype.workflow INFO: [MultiProc] Running 3 tasks, and 0 jobs ready. Free memory (GB): 54.13/56.53, Free processors: 22/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.compose_transforms * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.get_interpolation * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:14:37,202 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.compose_transforms" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/compose_transforms". 210416-10:14:37,202 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.get_interpolation" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/get_interpolation". 210416-10:14:37,416 nipype.workflow INFO: [Node] Running "get_interpolation" ("qsiprep.interfaces.images.ChooseInterpolator") 210416-10:14:37,486 nipype.workflow INFO: [Node] Running "compose_transforms" ("qsiprep.interfaces.gradients.ComposeTransforms") 210416-10:14:37,491 nipype.interface INFO: hmc 210416-10:14:37,492 nipype.interface INFO: fieldwarp 210416-10:14:37,492 nipype.interface INFO: to b=0 affine 210416-10:14:37,493 nipype.interface INFO: to b=0 warp 210416-10:14:37,493 nipype.interface INFO: b=0 to T1w 210416-10:14:37,494 nipype.interface INFO: Including ['/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat', '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat'] [1.3 1.3 1.3] [1.8 1.8 1.8] 210416-10:14:37,504 nipype.interface WARNING: Using BSpline interpolation for upsampling 210416-10:14:37,515 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.get_interpolation". 210416-10:14:37,596 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.compose_transforms". 210416-10:14:38,393 nipype.workflow INFO: [Job 73] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.get_interpolation). 210416-10:14:38,396 nipype.workflow INFO: [Job 80] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.compose_transforms). 210416-10:14:38,398 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 3 jobs ready. Free memory (GB): 54.53/56.53, Free processors: 24/32. Currently running: * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:14:39,73 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.cnr_tfm" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/cnr_tfm". 210416-10:14:40,397 nipype.workflow INFO: [MultiProc] Running 3 tasks, and 65 jobs ready. Free memory (GB): 53.33/56.53, Free processors: 22/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.cnr_tfm * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.rotate_gradients * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:14:40,533 nipype.workflow INFO: [Node] Setting-up "_dwi_transform16" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform16". 210416-10:14:40,535 nipype.workflow INFO: [Node] Setting-up "_dwi_transform17" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform17". 210416-10:14:40,539 nipype.workflow INFO: [Node] Setting-up "_dwi_transform18" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform18". 210416-10:14:40,543 nipype.workflow INFO: [Node] Setting-up "_dwi_transform19" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform19". 210416-10:14:40,546 nipype.workflow INFO: [Node] Setting-up "_dwi_transform20" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform20". 210416-10:14:40,549 nipype.workflow INFO: [Node] Setting-up "_dwi_transform21" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform21". 210416-10:14:40,554 nipype.workflow INFO: [Node] Running "_dwi_transform16" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0016.nii.gz --interpolation BSpline --output vol0016_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:40,555 nipype.workflow INFO: [Node] Running "_dwi_transform17" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0017.nii.gz --interpolation BSpline --output vol0017_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:40,558 nipype.workflow INFO: [Node] Running "_dwi_transform18" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0018.nii.gz --interpolation BSpline --output vol0018_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:40,562 nipype.workflow INFO: [Node] Running "_dwi_transform19" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0019.nii.gz --interpolation BSpline --output vol0019_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:40,566 nipype.workflow INFO: [Node] Running "_dwi_transform20" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0020.nii.gz --interpolation BSpline --output vol0020_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:40,568 nipype.workflow INFO: [Node] Running "_dwi_transform21" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0021.nii.gz --interpolation BSpline --output vol0021_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:40,715 nipype.workflow INFO: [Node] Setting-up "_dwi_transform0" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform0". 210416-10:14:40,737 nipype.workflow INFO: [Node] Running "_dwi_transform0" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0000.nii.gz --interpolation BSpline --output vol0000_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:40,752 nipype.workflow INFO: [Node] Setting-up "_dwi_transform12" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform12". 210416-10:14:40,753 nipype.workflow INFO: [Node] Setting-up "_dwi_transform3" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform3". 210416-10:14:40,754 nipype.workflow INFO: [Node] Setting-up "_dwi_transform5" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform5". 210416-10:14:40,755 nipype.workflow INFO: [Node] Setting-up "_dwi_transform1" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform1". 210416-10:14:40,756 nipype.workflow INFO: [Node] Setting-up "_dwi_transform4" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform4". 210416-10:14:40,770 nipype.workflow INFO: [Node] Setting-up "_dwi_transform13" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform13". 210416-10:14:40,768 nipype.workflow INFO: [Node] Setting-up "_dwi_transform11" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform11". 210416-10:14:40,771 nipype.workflow INFO: [Node] Setting-up "_dwi_transform2" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform2". 210416-10:14:40,774 nipype.workflow INFO: [Node] Running "_dwi_transform12" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0012.nii.gz --interpolation BSpline --output vol0012_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:40,774 nipype.workflow INFO: [Node] Setting-up "_dwi_transform9" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform9". 210416-10:14:40,778 nipype.workflow INFO: [Node] Running "_dwi_transform1" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0001.nii.gz --interpolation BSpline --output vol0001_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:40,778 nipype.workflow INFO: [Node] Running "_dwi_transform3" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0003.nii.gz --interpolation BSpline --output vol0003_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:40,779 nipype.workflow INFO: [Node] Running "_dwi_transform4" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0004.nii.gz --interpolation BSpline --output vol0004_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:40,780 nipype.workflow INFO: [Node] Setting-up "_dwi_transform7" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform7". 210416-10:14:40,780 nipype.workflow INFO: [Node] Setting-up "_dwi_transform14" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform14". 210416-10:14:40,787 nipype.workflow INFO: [Node] Running "_dwi_transform5" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0005.nii.gz --interpolation BSpline --output vol0005_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:40,790 nipype.workflow INFO: [Node] Setting-up "_dwi_transform15" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform15". 210416-10:14:40,790 nipype.workflow INFO: [Node] Setting-up "_dwi_transform6" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform6". 210416-10:14:40,796 nipype.workflow INFO: [Node] Running "_dwi_transform2" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0002.nii.gz --interpolation BSpline --output vol0002_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:40,794 nipype.workflow INFO: [Node] Running "_dwi_transform13" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0013.nii.gz --interpolation BSpline --output vol0013_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:40,797 nipype.workflow INFO: [Node] Running "_dwi_transform11" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0011.nii.gz --interpolation BSpline --output vol0011_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:40,797 nipype.workflow INFO: [Node] Setting-up "_dwi_transform10" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform10". 210416-10:14:40,799 nipype.workflow INFO: [Node] Running "_dwi_transform9" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0009.nii.gz --interpolation BSpline --output vol0009_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:40,802 nipype.workflow INFO: [Node] Running "_dwi_transform7" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0007.nii.gz --interpolation BSpline --output vol0007_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:40,802 nipype.workflow INFO: [Node] Running "_dwi_transform14" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0014.nii.gz --interpolation BSpline --output vol0014_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:40,802 nipype.workflow INFO: [Node] Setting-up "_dwi_transform8" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform8". 210416-10:14:40,813 nipype.workflow INFO: [Node] Running "_dwi_transform15" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0015.nii.gz --interpolation BSpline --output vol0015_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:40,815 nipype.workflow INFO: [Node] Running "_dwi_transform6" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0006.nii.gz --interpolation BSpline --output vol0006_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:40,819 nipype.workflow INFO: [Node] Running "_dwi_transform10" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0010.nii.gz --interpolation BSpline --output vol0010_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:40,830 nipype.workflow INFO: [Node] Running "_dwi_transform8" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0008.nii.gz --interpolation BSpline --output vol0008_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:42,398 nipype.workflow INFO: [MultiProc] Running 25 tasks, and 43 jobs ready. Free memory (GB): 48.93/56.53, Free processors: 0/32. Currently running: * _dwi_transform21 * _dwi_transform20 * _dwi_transform19 * _dwi_transform18 * _dwi_transform17 * _dwi_transform16 * _dwi_transform15 * _dwi_transform14 * _dwi_transform13 * _dwi_transform12 * _dwi_transform11 * _dwi_transform10 * _dwi_transform9 * _dwi_transform8 * _dwi_transform7 * _dwi_transform6 * _dwi_transform5 * _dwi_transform4 * _dwi_transform3 * _dwi_transform2 * _dwi_transform1 * _dwi_transform0 * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.cnr_tfm * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.rotate_gradients * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:14:50,106 nipype.workflow INFO: [Node] Finished "_dwi_transform21". 210416-10:14:50,350 nipype.workflow INFO: [Node] Finished "_dwi_transform1". 210416-10:14:50,405 nipype.workflow INFO: [Job 128] Completed (_dwi_transform1). 210416-10:14:50,422 nipype.workflow INFO: [Job 148] Completed (_dwi_transform21). 210416-10:14:50,426 nipype.workflow INFO: [MultiProc] Running 23 tasks, and 43 jobs ready. Free memory (GB): 49.33/56.53, Free processors: 2/32. Currently running: * _dwi_transform20 * _dwi_transform19 * _dwi_transform18 * _dwi_transform17 * _dwi_transform16 * _dwi_transform15 * _dwi_transform14 * _dwi_transform13 * _dwi_transform12 * _dwi_transform11 * _dwi_transform10 * _dwi_transform9 * _dwi_transform8 * _dwi_transform7 * _dwi_transform6 * _dwi_transform5 * _dwi_transform4 * _dwi_transform3 * _dwi_transform2 * _dwi_transform0 * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.cnr_tfm * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.rotate_gradients * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:14:50,460 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.rotate_gradients" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients". 210416-10:14:50,565 nipype.workflow INFO: [Node] Setting-up "_dwi_transform22" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform22". 210416-10:14:50,569 nipype.workflow INFO: [Node] Setting-up "_dwi_transform23" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform23". 210416-10:14:50,587 nipype.workflow INFO: [Node] Running "_dwi_transform22" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0022.nii.gz --interpolation BSpline --output vol0022_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:50,590 nipype.workflow INFO: [Node] Running "_dwi_transform23" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0023.nii.gz --interpolation BSpline --output vol0023_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:50,592 nipype.workflow INFO: [Node] Running "cnr_tfm" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/cnr_lps/eddy_corrected.eddy_cnr_maps_LPS.nii.gz --interpolation LanczosWindowedSinc --output eddy_corrected.eddy_cnr_maps_LPS_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:50,802 nipype.workflow INFO: [Node] Finished "_dwi_transform9". 210416-10:14:50,801 nipype.workflow INFO: [Node] Finished "_dwi_transform17". 210416-10:14:50,810 nipype.workflow INFO: [Node] Finished "_dwi_transform5". 210416-10:14:50,851 nipype.workflow INFO: [Node] Finished "_dwi_transform16". 210416-10:14:50,856 nipype.workflow INFO: [Node] Finished "_dwi_transform13". 210416-10:14:50,870 nipype.workflow INFO: [Node] Finished "_dwi_transform10". 210416-10:14:50,876 nipype.workflow INFO: [Node] Finished "_dwi_transform0". 210416-10:14:50,884 nipype.workflow INFO: [Node] Finished "_dwi_transform6". 210416-10:14:50,889 nipype.workflow INFO: [Node] Finished "_dwi_transform14". 210416-10:14:50,890 nipype.workflow INFO: [Node] Finished "_dwi_transform7". 210416-10:14:50,932 nipype.workflow INFO: [Node] Finished "_dwi_transform4". 210416-10:14:50,932 nipype.workflow INFO: [Node] Finished "_dwi_transform20". 210416-10:14:50,933 nipype.workflow INFO: [Node] Finished "_dwi_transform18". 210416-10:14:50,935 nipype.workflow INFO: [Node] Finished "_dwi_transform12". 210416-10:14:50,936 nipype.workflow INFO: [Node] Finished "_dwi_transform2". 210416-10:14:50,945 nipype.workflow INFO: [Node] Finished "_dwi_transform19". 210416-10:14:50,952 nipype.workflow INFO: [Node] Finished "_dwi_transform8". 210416-10:14:50,954 nipype.workflow INFO: [Node] Finished "_dwi_transform11". 210416-10:14:50,973 nipype.workflow INFO: [Node] Finished "_dwi_transform3". 210416-10:14:51,97 nipype.workflow INFO: [Node] Finished "_dwi_transform15". 210416-10:14:51,312 nipype.workflow INFO: [Node] Running "rotate_gradients" ("qsiprep.interfaces.gradients.GradientRotation") 210416-10:14:51,525 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:14:52,410 nipype.workflow INFO: [Job 127] Completed (_dwi_transform0). 210416-10:14:52,414 nipype.workflow INFO: [Job 129] Completed (_dwi_transform2). 210416-10:14:52,416 nipype.workflow INFO: [Job 130] Completed (_dwi_transform3). 210416-10:14:52,417 nipype.workflow INFO: [Job 131] Completed (_dwi_transform4). 210416-10:14:52,418 nipype.workflow INFO: [Job 132] Completed (_dwi_transform5). 210416-10:14:52,419 nipype.workflow INFO: [Job 133] Completed (_dwi_transform6). 210416-10:14:52,420 nipype.workflow INFO: [Job 134] Completed (_dwi_transform7). 210416-10:14:52,421 nipype.workflow INFO: [Job 135] Completed (_dwi_transform8). 210416-10:14:52,422 nipype.workflow INFO: [Job 136] Completed (_dwi_transform9). 210416-10:14:52,424 nipype.workflow INFO: [Job 137] Completed (_dwi_transform10). 210416-10:14:52,425 nipype.workflow INFO: [Job 138] Completed (_dwi_transform11). 210416-10:14:52,426 nipype.workflow INFO: [Job 139] Completed (_dwi_transform12). 210416-10:14:52,427 nipype.workflow INFO: [Job 140] Completed (_dwi_transform13). 210416-10:14:52,428 nipype.workflow INFO: [Job 141] Completed (_dwi_transform14). 210416-10:14:52,429 nipype.workflow INFO: [Job 142] Completed (_dwi_transform15). 210416-10:14:52,430 nipype.workflow INFO: [Job 143] Completed (_dwi_transform16). 210416-10:14:52,431 nipype.workflow INFO: [Job 144] Completed (_dwi_transform17). 210416-10:14:52,432 nipype.workflow INFO: [Job 145] Completed (_dwi_transform18). 210416-10:14:52,433 nipype.workflow INFO: [Job 146] Completed (_dwi_transform19). 210416-10:14:52,434 nipype.workflow INFO: [Job 147] Completed (_dwi_transform20). 210416-10:14:52,436 nipype.workflow INFO: [MultiProc] Running 5 tasks, and 41 jobs ready. Free memory (GB): 52.93/56.53, Free processors: 20/32. Currently running: * _dwi_transform23 * _dwi_transform22 * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.cnr_tfm * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.rotate_gradients * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:14:52,528 nipype.workflow INFO: [Node] Setting-up "_dwi_transform24" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform24". 210416-10:14:52,529 nipype.workflow INFO: [Node] Setting-up "_dwi_transform25" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform25". 210416-10:14:52,533 nipype.workflow INFO: [Node] Setting-up "_dwi_transform26" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform26". 210416-10:14:52,536 nipype.workflow INFO: [Node] Setting-up "_dwi_transform27" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform27". 210416-10:14:52,540 nipype.workflow INFO: [Node] Setting-up "_dwi_transform28" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform28". 210416-10:14:52,543 nipype.workflow INFO: [Node] Setting-up "_dwi_transform29" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform29". 210416-10:14:52,547 nipype.workflow INFO: [Node] Running "_dwi_transform25" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0025.nii.gz --interpolation BSpline --output vol0025_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:52,547 nipype.workflow INFO: [Node] Running "_dwi_transform24" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0024.nii.gz --interpolation BSpline --output vol0024_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:52,547 nipype.workflow INFO: [Node] Setting-up "_dwi_transform30" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform30". 210416-10:14:52,550 nipype.workflow INFO: [Node] Running "_dwi_transform26" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0026.nii.gz --interpolation BSpline --output vol0026_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:52,550 nipype.workflow INFO: [Node] Setting-up "_dwi_transform31" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform31". 210416-10:14:52,553 nipype.workflow INFO: [Node] Setting-up "_dwi_transform32" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform32". 210416-10:14:52,553 nipype.workflow INFO: [Node] Running "_dwi_transform27" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0027.nii.gz --interpolation BSpline --output vol0027_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:52,556 nipype.workflow INFO: [Node] Running "_dwi_transform28" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0028.nii.gz --interpolation BSpline --output vol0028_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:52,556 nipype.workflow INFO: [Node] Setting-up "_dwi_transform33" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform33". 210416-10:14:52,559 nipype.workflow INFO: [Node] Running "_dwi_transform29" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0029.nii.gz --interpolation BSpline --output vol0029_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:52,560 nipype.workflow INFO: [Node] Setting-up "_dwi_transform34" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform34". 210416-10:14:52,563 nipype.workflow INFO: [Node] Running "_dwi_transform30" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0030.nii.gz --interpolation BSpline --output vol0030_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:52,563 nipype.workflow INFO: [Node] Setting-up "_dwi_transform35" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform35". 210416-10:14:52,566 nipype.workflow INFO: [Node] Setting-up "_dwi_transform36" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform36". 210416-10:14:52,566 nipype.workflow INFO: [Node] Running "_dwi_transform31" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0031.nii.gz --interpolation BSpline --output vol0031_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:52,570 nipype.workflow INFO: [Node] Running "_dwi_transform32" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0032.nii.gz --interpolation BSpline --output vol0032_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:52,570 nipype.workflow INFO: [Node] Setting-up "_dwi_transform37" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform37". 210416-10:14:52,575 nipype.workflow INFO: [Node] Running "_dwi_transform33" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0033.nii.gz --interpolation BSpline --output vol0033_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:52,575 nipype.workflow INFO: [Node] Setting-up "_dwi_transform38" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform38". 210416-10:14:52,579 nipype.workflow INFO: [Node] Setting-up "_dwi_transform39" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform39". 210416-10:14:52,579 nipype.workflow INFO: [Node] Running "_dwi_transform34" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0034.nii.gz --interpolation BSpline --output vol0034_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:52,583 nipype.workflow INFO: [Node] Setting-up "_dwi_transform40" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform40". 210416-10:14:52,584 nipype.workflow INFO: [Node] Running "_dwi_transform35" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0035.nii.gz --interpolation BSpline --output vol0035_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:52,587 nipype.workflow INFO: [Node] Setting-up "_dwi_transform41" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform41". 210416-10:14:52,586 nipype.workflow INFO: [Node] Running "_dwi_transform36" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0036.nii.gz --interpolation BSpline --output vol0036_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:52,591 nipype.workflow INFO: [Node] Setting-up "_dwi_transform42" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform42". 210416-10:14:52,595 nipype.workflow INFO: [Node] Setting-up "_dwi_transform43" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform43". 210416-10:14:52,597 nipype.workflow INFO: [Node] Running "_dwi_transform37" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0037.nii.gz --interpolation BSpline --output vol0037_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:52,597 nipype.workflow INFO: [Node] Running "_dwi_transform38" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0038.nii.gz --interpolation BSpline --output vol0038_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:52,599 nipype.workflow INFO: [Node] Running "_dwi_transform39" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0039.nii.gz --interpolation BSpline --output vol0039_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:52,604 nipype.workflow INFO: [Node] Running "_dwi_transform40" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0040.nii.gz --interpolation BSpline --output vol0040_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:52,607 nipype.workflow INFO: [Node] Running "_dwi_transform41" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0041.nii.gz --interpolation BSpline --output vol0041_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:52,612 nipype.workflow INFO: [Node] Running "_dwi_transform42" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0042.nii.gz --interpolation BSpline --output vol0042_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:52,614 nipype.workflow INFO: [Node] Running "_dwi_transform43" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0043.nii.gz --interpolation BSpline --output vol0043_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:14:54,134 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:14:54,413 nipype.workflow INFO: [MultiProc] Running 25 tasks, and 21 jobs ready. Free memory (GB): 48.93/56.53, Free processors: 0/32. Currently running: * _dwi_transform43 * _dwi_transform42 * _dwi_transform41 * _dwi_transform40 * _dwi_transform39 * _dwi_transform38 * _dwi_transform37 * _dwi_transform36 * _dwi_transform35 * _dwi_transform34 * _dwi_transform33 * _dwi_transform32 * _dwi_transform31 * _dwi_transform30 * _dwi_transform29 * _dwi_transform28 * _dwi_transform27 * _dwi_transform26 * _dwi_transform25 * _dwi_transform24 * _dwi_transform23 * _dwi_transform22 * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.cnr_tfm * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.rotate_gradients * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:14:55,602 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:14:56,946 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:14:58,194 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:14:59,238 nipype.workflow INFO: [Node] Finished "_dwi_transform33". 210416-10:14:59,461 nipype.workflow INFO: [Node] Finished "_dwi_transform39". 210416-10:14:59,466 nipype.workflow INFO: [Node] Finished "_dwi_transform35". 210416-10:14:59,470 nipype.workflow INFO: [Node] Finished "_dwi_transform36". 210416-10:14:59,484 nipype.workflow INFO: [Node] Finished "_dwi_transform40". 210416-10:14:59,555 nipype.workflow INFO: [Node] Finished "_dwi_transform31". 210416-10:14:59,738 nipype.workflow INFO: [Node] Finished "_dwi_transform41". 210416-10:14:59,752 nipype.workflow INFO: [Node] Finished "_dwi_transform30". 210416-10:14:59,781 nipype.workflow INFO: [Node] Finished "_dwi_transform23". 210416-10:14:59,792 nipype.workflow INFO: [Node] Finished "_dwi_transform32". 210416-10:14:59,918 nipype.workflow INFO: [Node] Finished "_dwi_transform29". 210416-10:14:59,964 nipype.workflow INFO: [Node] Finished "_dwi_transform34". 210416-10:14:59,966 nipype.workflow INFO: [Node] Finished "_dwi_transform38". 210416-10:14:59,981 nipype.workflow INFO: [Node] Finished "_dwi_transform42". 210416-10:14:59,993 nipype.workflow INFO: [Node] Finished "_dwi_transform43". 210416-10:14:59,996 nipype.workflow INFO: [Node] Finished "_dwi_transform37". 210416-10:15:00,2 nipype.workflow INFO: [Node] Finished "_dwi_transform22". 210416-10:15:00,62 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:00,419 nipype.workflow INFO: [Job 149] Completed (_dwi_transform22). 210416-10:15:00,425 nipype.workflow INFO: [Job 150] Completed (_dwi_transform23). 210416-10:15:00,426 nipype.workflow INFO: [Job 156] Completed (_dwi_transform29). 210416-10:15:00,427 nipype.workflow INFO: [Job 157] Completed (_dwi_transform30). 210416-10:15:00,428 nipype.workflow INFO: [Job 158] Completed (_dwi_transform31). 210416-10:15:00,429 nipype.workflow INFO: [Job 159] Completed (_dwi_transform32). 210416-10:15:00,430 nipype.workflow INFO: [Job 160] Completed (_dwi_transform33). 210416-10:15:00,431 nipype.workflow INFO: [Job 161] Completed (_dwi_transform34). 210416-10:15:00,432 nipype.workflow INFO: [Job 162] Completed (_dwi_transform35). 210416-10:15:00,433 nipype.workflow INFO: [Job 163] Completed (_dwi_transform36). 210416-10:15:00,434 nipype.workflow INFO: [Job 164] Completed (_dwi_transform37). 210416-10:15:00,435 nipype.workflow INFO: [Job 165] Completed (_dwi_transform38). 210416-10:15:00,436 nipype.workflow INFO: [Job 166] Completed (_dwi_transform39). 210416-10:15:00,437 nipype.workflow INFO: [Job 167] Completed (_dwi_transform40). 210416-10:15:00,438 nipype.workflow INFO: [Job 168] Completed (_dwi_transform41). 210416-10:15:00,439 nipype.workflow INFO: [Job 169] Completed (_dwi_transform42). 210416-10:15:00,441 nipype.workflow INFO: [Job 170] Completed (_dwi_transform43). 210416-10:15:00,443 nipype.workflow INFO: [MultiProc] Running 8 tasks, and 21 jobs ready. Free memory (GB): 52.33/56.53, Free processors: 17/32. Currently running: * _dwi_transform28 * _dwi_transform27 * _dwi_transform26 * _dwi_transform25 * _dwi_transform24 * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.cnr_tfm * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.rotate_gradients * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:15:00,534 nipype.workflow INFO: [Node] Setting-up "_dwi_transform44" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform44". 210416-10:15:00,537 nipype.workflow INFO: [Node] Setting-up "_dwi_transform45" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform45". 210416-10:15:00,540 nipype.workflow INFO: [Node] Setting-up "_dwi_transform46" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform46". 210416-10:15:00,543 nipype.workflow INFO: [Node] Setting-up "_dwi_transform47" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform47". 210416-10:15:00,546 nipype.workflow INFO: [Node] Setting-up "_dwi_transform48" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform48". 210416-10:15:00,550 nipype.workflow INFO: [Node] Setting-up "_dwi_transform49" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform49". 210416-10:15:00,557 nipype.workflow INFO: [Node] Running "_dwi_transform44" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0044.nii.gz --interpolation BSpline --output vol0044_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:15:00,557 nipype.workflow INFO: [Node] Running "_dwi_transform45" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0045.nii.gz --interpolation BSpline --output vol0045_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:15:00,557 nipype.workflow INFO: [Node] Setting-up "_dwi_transform50" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform50". 210416-10:15:00,558 nipype.workflow INFO: [Node] Running "_dwi_transform46" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0046.nii.gz --interpolation BSpline --output vol0046_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:15:00,562 nipype.workflow INFO: [Node] Running "_dwi_transform47" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0047.nii.gz --interpolation BSpline --output vol0047_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:15:00,562 nipype.workflow INFO: [Node] Setting-up "_dwi_transform51" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform51". 210416-10:15:00,566 nipype.workflow INFO: [Node] Setting-up "_dwi_transform52" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform52". 210416-10:15:00,569 nipype.workflow INFO: [Node] Setting-up "_dwi_transform53" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform53". 210416-10:15:00,569 nipype.workflow INFO: [Node] Running "_dwi_transform48" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0048.nii.gz --interpolation BSpline --output vol0048_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:15:00,569 nipype.workflow INFO: [Node] Running "_dwi_transform49" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0049.nii.gz --interpolation BSpline --output vol0049_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:15:00,572 nipype.workflow INFO: [Node] Setting-up "_dwi_transform54" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform54". 210416-10:15:00,576 nipype.workflow INFO: [Node] Running "_dwi_transform50" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0050.nii.gz --interpolation BSpline --output vol0050_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:15:00,577 nipype.workflow INFO: [Node] Setting-up "_dwi_transform55" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform55". 210416-10:15:00,580 nipype.workflow INFO: [Node] Setting-up "_dwi_transform56" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform56". 210416-10:15:00,581 nipype.workflow INFO: [Node] Running "_dwi_transform51" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0051.nii.gz --interpolation BSpline --output vol0051_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:15:00,583 nipype.workflow INFO: [Node] Setting-up "_dwi_transform57" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform57". 210416-10:15:00,583 nipype.workflow INFO: [Node] Running "_dwi_transform52" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0052.nii.gz --interpolation BSpline --output vol0052_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:15:00,589 nipype.workflow INFO: [Node] Setting-up "_dwi_transform58" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform58". 210416-10:15:00,590 nipype.workflow INFO: [Node] Running "_dwi_transform53" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0053.nii.gz --interpolation BSpline --output vol0053_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:15:00,590 nipype.workflow INFO: [Node] Running "_dwi_transform54" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0054.nii.gz --interpolation BSpline --output vol0054_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:15:00,594 nipype.workflow INFO: [Node] Setting-up "_dwi_transform59" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform59". 210416-10:15:00,600 nipype.workflow INFO: [Node] Running "_dwi_transform55" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0055.nii.gz --interpolation BSpline --output vol0055_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:15:00,602 nipype.workflow INFO: [Node] Running "_dwi_transform56" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0056.nii.gz --interpolation BSpline --output vol0056_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:15:00,608 nipype.workflow INFO: [Node] Running "_dwi_transform57" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0057.nii.gz --interpolation BSpline --output vol0057_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:15:00,607 nipype.workflow INFO: [Node] Setting-up "_dwi_transform60" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform60". 210416-10:15:00,612 nipype.workflow INFO: [Node] Running "_dwi_transform58" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0058.nii.gz --interpolation BSpline --output vol0058_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:15:00,618 nipype.workflow INFO: [Node] Running "_dwi_transform59" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0059.nii.gz --interpolation BSpline --output vol0059_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:15:00,633 nipype.workflow INFO: [Node] Running "_dwi_transform60" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0060.nii.gz --interpolation BSpline --output vol0060_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:15:00,957 nipype.workflow INFO: [Node] Finished "_dwi_transform28". 210416-10:15:00,957 nipype.workflow INFO: [Node] Finished "_dwi_transform27". 210416-10:15:00,957 nipype.workflow INFO: [Node] Finished "_dwi_transform26". 210416-10:15:01,179 nipype.workflow INFO: [Node] Finished "_dwi_transform25". 210416-10:15:01,197 nipype.workflow INFO: [Node] Finished "_dwi_transform24". 210416-10:15:01,745 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:02,420 nipype.workflow INFO: [Job 151] Completed (_dwi_transform24). 210416-10:15:02,424 nipype.workflow INFO: [Job 152] Completed (_dwi_transform25). 210416-10:15:02,425 nipype.workflow INFO: [Job 153] Completed (_dwi_transform26). 210416-10:15:02,427 nipype.workflow INFO: [Job 154] Completed (_dwi_transform27). 210416-10:15:02,428 nipype.workflow INFO: [Job 155] Completed (_dwi_transform28). 210416-10:15:02,431 nipype.workflow INFO: [MultiProc] Running 20 tasks, and 4 jobs ready. Free memory (GB): 49.93/56.53, Free processors: 5/32. Currently running: * _dwi_transform60 * _dwi_transform59 * _dwi_transform58 * _dwi_transform57 * _dwi_transform56 * _dwi_transform55 * _dwi_transform54 * _dwi_transform53 * _dwi_transform52 * _dwi_transform51 * _dwi_transform50 * _dwi_transform49 * _dwi_transform48 * _dwi_transform47 * _dwi_transform46 * _dwi_transform45 * _dwi_transform44 * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.cnr_tfm * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.rotate_gradients * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:15:02,558 nipype.workflow INFO: [Node] Setting-up "_dwi_transform64" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform64". 210416-10:15:02,577 nipype.workflow INFO: [Node] Running "_dwi_transform64" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0064.nii.gz --interpolation BSpline --output vol0064_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:15:02,594 nipype.workflow INFO: [Node] Setting-up "_dwi_transform61" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform61". 210416-10:15:02,595 nipype.workflow INFO: [Node] Setting-up "_dwi_transform63" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform63". 210416-10:15:02,596 nipype.workflow INFO: [Node] Setting-up "_dwi_transform62" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform62". 210416-10:15:02,622 nipype.workflow INFO: [Node] Running "_dwi_transform63" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0063.nii.gz --interpolation BSpline --output vol0063_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:15:02,623 nipype.workflow INFO: [Node] Running "_dwi_transform62" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0062.nii.gz --interpolation BSpline --output vol0062_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:15:02,625 nipype.workflow INFO: [Node] Running "_dwi_transform61" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/hmc_sdc_wf/split_eddy_lps/vol0061.nii.gz --interpolation BSpline --output vol0061_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/output_grid_wf/resample_to_voxel_size/mni_1mm_t1w_lps_autobox_warp_resample.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat 210416-10:15:03,104 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:04,128 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:04,426 nipype.workflow INFO: [MultiProc] Running 24 tasks, and 0 jobs ready. Free memory (GB): 49.13/56.53, Free processors: 1/32. Currently running: * _dwi_transform64 * _dwi_transform63 * _dwi_transform62 * _dwi_transform61 * _dwi_transform60 * _dwi_transform59 * _dwi_transform58 * _dwi_transform57 * _dwi_transform56 * _dwi_transform55 * _dwi_transform54 * _dwi_transform53 * _dwi_transform52 * _dwi_transform51 * _dwi_transform50 * _dwi_transform49 * _dwi_transform48 * _dwi_transform47 * _dwi_transform46 * _dwi_transform45 * _dwi_transform44 * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.cnr_tfm * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.rotate_gradients * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:15:05,74 nipype.workflow INFO: [Node] Finished "_dwi_transform47". 210416-10:15:05,164 nipype.workflow INFO: [Node] Finished "_dwi_transform53". 210416-10:15:05,227 nipype.workflow INFO: [Node] Finished "_dwi_transform56". 210416-10:15:05,270 nipype.workflow INFO: [Node] Finished "_dwi_transform51". 210416-10:15:05,387 nipype.workflow INFO: [Node] Finished "_dwi_transform49". 210416-10:15:05,404 nipype.workflow INFO: [Node] Finished "_dwi_transform45". 210416-10:15:05,411 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:05,528 nipype.workflow INFO: [Node] Finished "_dwi_transform60". 210416-10:15:05,610 nipype.workflow INFO: [Node] Finished "_dwi_transform57". 210416-10:15:05,683 nipype.workflow INFO: [Node] Finished "_dwi_transform50". 210416-10:15:05,687 nipype.workflow INFO: [Node] Finished "_dwi_transform55". 210416-10:15:05,757 nipype.workflow INFO: [Node] Finished "_dwi_transform58". 210416-10:15:05,779 nipype.workflow INFO: [Node] Finished "_dwi_transform46". 210416-10:15:05,781 nipype.workflow INFO: [Node] Finished "_dwi_transform59". 210416-10:15:05,794 nipype.workflow INFO: [Node] Finished "_dwi_transform48". 210416-10:15:05,805 nipype.workflow INFO: [Node] Finished "_dwi_transform52". 210416-10:15:05,811 nipype.workflow INFO: [Node] Finished "_dwi_transform44". 210416-10:15:05,835 nipype.workflow INFO: [Node] Finished "_dwi_transform54". 210416-10:15:06,424 nipype.workflow INFO: [Job 171] Completed (_dwi_transform44). 210416-10:15:06,584 nipype.workflow INFO: [Job 172] Completed (_dwi_transform45). 210416-10:15:06,585 nipype.workflow INFO: [Job 173] Completed (_dwi_transform46). 210416-10:15:06,586 nipype.workflow INFO: [Job 174] Completed (_dwi_transform47). 210416-10:15:06,587 nipype.workflow INFO: [Job 175] Completed (_dwi_transform48). 210416-10:15:06,588 nipype.workflow INFO: [Job 176] Completed (_dwi_transform49). 210416-10:15:06,590 nipype.workflow INFO: [Job 177] Completed (_dwi_transform50). 210416-10:15:06,591 nipype.workflow INFO: [Job 178] Completed (_dwi_transform51). 210416-10:15:06,592 nipype.workflow INFO: [Job 179] Completed (_dwi_transform52). 210416-10:15:06,593 nipype.workflow INFO: [Job 180] Completed (_dwi_transform53). 210416-10:15:06,594 nipype.workflow INFO: [Job 181] Completed (_dwi_transform54). 210416-10:15:06,595 nipype.workflow INFO: [Job 182] Completed (_dwi_transform55). 210416-10:15:06,596 nipype.workflow INFO: [Job 183] Completed (_dwi_transform56). 210416-10:15:06,597 nipype.workflow INFO: [Job 184] Completed (_dwi_transform57). 210416-10:15:06,598 nipype.workflow INFO: [Job 185] Completed (_dwi_transform58). 210416-10:15:06,599 nipype.workflow INFO: [Job 186] Completed (_dwi_transform59). 210416-10:15:06,600 nipype.workflow INFO: [Job 187] Completed (_dwi_transform60). 210416-10:15:06,602 nipype.workflow INFO: [MultiProc] Running 7 tasks, and 0 jobs ready. Free memory (GB): 52.53/56.53, Free processors: 18/32. Currently running: * _dwi_transform64 * _dwi_transform63 * _dwi_transform62 * _dwi_transform61 * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.cnr_tfm * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.rotate_gradients * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:15:07,220 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:07,438 nipype.workflow INFO: [Node] Finished "_dwi_transform63". 210416-10:15:07,509 nipype.workflow INFO: [Node] Finished "_dwi_transform61". 210416-10:15:07,518 nipype.workflow INFO: [Node] Finished "_dwi_transform64". 210416-10:15:07,553 nipype.workflow INFO: [Node] Finished "_dwi_transform62". 210416-10:15:08,424 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:08,425 nipype.workflow INFO: [Job 188] Completed (_dwi_transform61). 210416-10:15:08,426 nipype.workflow INFO: [Job 189] Completed (_dwi_transform62). 210416-10:15:08,428 nipype.workflow INFO: [Job 190] Completed (_dwi_transform63). 210416-10:15:08,429 nipype.workflow INFO: [Job 191] Completed (_dwi_transform64). 210416-10:15:08,431 nipype.workflow INFO: [MultiProc] Running 3 tasks, and 1 jobs ready. Free memory (GB): 53.33/56.53, Free processors: 22/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.cnr_tfm * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.rotate_gradients * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:15:08,627 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.dwi_transform" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform". 210416-10:15:08,838 nipype.workflow INFO: [Node] Setting-up "_dwi_transform0" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform0". 210416-10:15:08,845 nipype.workflow INFO: [Node] Cached "_dwi_transform0" - collecting precomputed outputs 210416-10:15:08,845 nipype.workflow INFO: [Node] "_dwi_transform0" found cached. 210416-10:15:08,848 nipype.workflow INFO: [Node] Setting-up "_dwi_transform1" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform1". 210416-10:15:08,856 nipype.workflow INFO: [Node] Cached "_dwi_transform1" - collecting precomputed outputs 210416-10:15:08,857 nipype.workflow INFO: [Node] "_dwi_transform1" found cached. 210416-10:15:08,860 nipype.workflow INFO: [Node] Setting-up "_dwi_transform2" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform2". 210416-10:15:08,867 nipype.workflow INFO: [Node] Cached "_dwi_transform2" - collecting precomputed outputs 210416-10:15:08,868 nipype.workflow INFO: [Node] "_dwi_transform2" found cached. 210416-10:15:08,871 nipype.workflow INFO: [Node] Setting-up "_dwi_transform3" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform3". 210416-10:15:08,878 nipype.workflow INFO: [Node] Cached "_dwi_transform3" - collecting precomputed outputs 210416-10:15:08,879 nipype.workflow INFO: [Node] "_dwi_transform3" found cached. 210416-10:15:08,881 nipype.workflow INFO: [Node] Setting-up "_dwi_transform4" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform4". 210416-10:15:08,889 nipype.workflow INFO: [Node] Cached "_dwi_transform4" - collecting precomputed outputs 210416-10:15:08,890 nipype.workflow INFO: [Node] "_dwi_transform4" found cached. 210416-10:15:08,893 nipype.workflow INFO: [Node] Setting-up "_dwi_transform5" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform5". 210416-10:15:08,901 nipype.workflow INFO: [Node] Cached "_dwi_transform5" - collecting precomputed outputs 210416-10:15:08,901 nipype.workflow INFO: [Node] "_dwi_transform5" found cached. 210416-10:15:08,904 nipype.workflow INFO: [Node] Setting-up "_dwi_transform6" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform6". 210416-10:15:08,911 nipype.workflow INFO: [Node] Cached "_dwi_transform6" - collecting precomputed outputs 210416-10:15:08,912 nipype.workflow INFO: [Node] "_dwi_transform6" found cached. 210416-10:15:08,915 nipype.workflow INFO: [Node] Setting-up "_dwi_transform7" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform7". 210416-10:15:08,923 nipype.workflow INFO: [Node] Cached "_dwi_transform7" - collecting precomputed outputs 210416-10:15:08,923 nipype.workflow INFO: [Node] "_dwi_transform7" found cached. 210416-10:15:08,927 nipype.workflow INFO: [Node] Setting-up "_dwi_transform8" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform8". 210416-10:15:08,934 nipype.workflow INFO: [Node] Cached "_dwi_transform8" - collecting precomputed outputs 210416-10:15:08,934 nipype.workflow INFO: [Node] "_dwi_transform8" found cached. 210416-10:15:08,937 nipype.workflow INFO: [Node] Setting-up "_dwi_transform9" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform9". 210416-10:15:08,945 nipype.workflow INFO: [Node] Cached "_dwi_transform9" - collecting precomputed outputs 210416-10:15:08,946 nipype.workflow INFO: [Node] "_dwi_transform9" found cached. 210416-10:15:08,949 nipype.workflow INFO: [Node] Setting-up "_dwi_transform10" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform10". 210416-10:15:08,957 nipype.workflow INFO: [Node] Cached "_dwi_transform10" - collecting precomputed outputs 210416-10:15:08,958 nipype.workflow INFO: [Node] "_dwi_transform10" found cached. 210416-10:15:08,961 nipype.workflow INFO: [Node] Setting-up "_dwi_transform11" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform11". 210416-10:15:08,969 nipype.workflow INFO: [Node] Cached "_dwi_transform11" - collecting precomputed outputs 210416-10:15:08,969 nipype.workflow INFO: [Node] "_dwi_transform11" found cached. 210416-10:15:08,973 nipype.workflow INFO: [Node] Setting-up "_dwi_transform12" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform12". 210416-10:15:08,981 nipype.workflow INFO: [Node] Cached "_dwi_transform12" - collecting precomputed outputs 210416-10:15:08,981 nipype.workflow INFO: [Node] "_dwi_transform12" found cached. 210416-10:15:08,984 nipype.workflow INFO: [Node] Setting-up "_dwi_transform13" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform13". 210416-10:15:08,991 nipype.workflow INFO: [Node] Cached "_dwi_transform13" - collecting precomputed outputs 210416-10:15:08,991 nipype.workflow INFO: [Node] "_dwi_transform13" found cached. 210416-10:15:08,994 nipype.workflow INFO: [Node] Setting-up "_dwi_transform14" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform14". 210416-10:15:09,2 nipype.workflow INFO: [Node] Cached "_dwi_transform14" - collecting precomputed outputs 210416-10:15:09,2 nipype.workflow INFO: [Node] "_dwi_transform14" found cached. 210416-10:15:09,6 nipype.workflow INFO: [Node] Setting-up "_dwi_transform15" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform15". 210416-10:15:09,14 nipype.workflow INFO: [Node] Cached "_dwi_transform15" - collecting precomputed outputs 210416-10:15:09,14 nipype.workflow INFO: [Node] "_dwi_transform15" found cached. 210416-10:15:09,17 nipype.workflow INFO: [Node] Setting-up "_dwi_transform16" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform16". 210416-10:15:09,25 nipype.workflow INFO: [Node] Cached "_dwi_transform16" - collecting precomputed outputs 210416-10:15:09,26 nipype.workflow INFO: [Node] "_dwi_transform16" found cached. 210416-10:15:09,29 nipype.workflow INFO: [Node] Setting-up "_dwi_transform17" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform17". 210416-10:15:09,36 nipype.workflow INFO: [Node] Cached "_dwi_transform17" - collecting precomputed outputs 210416-10:15:09,37 nipype.workflow INFO: [Node] "_dwi_transform17" found cached. 210416-10:15:09,40 nipype.workflow INFO: [Node] Setting-up "_dwi_transform18" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform18". 210416-10:15:09,49 nipype.workflow INFO: [Node] Cached "_dwi_transform18" - collecting precomputed outputs 210416-10:15:09,49 nipype.workflow INFO: [Node] "_dwi_transform18" found cached. 210416-10:15:09,53 nipype.workflow INFO: [Node] Setting-up "_dwi_transform19" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform19". 210416-10:15:09,61 nipype.workflow INFO: [Node] Cached "_dwi_transform19" - collecting precomputed outputs 210416-10:15:09,62 nipype.workflow INFO: [Node] "_dwi_transform19" found cached. 210416-10:15:09,65 nipype.workflow INFO: [Node] Setting-up "_dwi_transform20" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform20". 210416-10:15:09,74 nipype.workflow INFO: [Node] Cached "_dwi_transform20" - collecting precomputed outputs 210416-10:15:09,74 nipype.workflow INFO: [Node] "_dwi_transform20" found cached. 210416-10:15:09,77 nipype.workflow INFO: [Node] Setting-up "_dwi_transform21" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform21". 210416-10:15:09,86 nipype.workflow INFO: [Node] Cached "_dwi_transform21" - collecting precomputed outputs 210416-10:15:09,86 nipype.workflow INFO: [Node] "_dwi_transform21" found cached. 210416-10:15:09,90 nipype.workflow INFO: [Node] Setting-up "_dwi_transform22" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform22". 210416-10:15:09,98 nipype.workflow INFO: [Node] Cached "_dwi_transform22" - collecting precomputed outputs 210416-10:15:09,99 nipype.workflow INFO: [Node] "_dwi_transform22" found cached. 210416-10:15:09,102 nipype.workflow INFO: [Node] Setting-up "_dwi_transform23" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform23". 210416-10:15:09,110 nipype.workflow INFO: [Node] Cached "_dwi_transform23" - collecting precomputed outputs 210416-10:15:09,110 nipype.workflow INFO: [Node] "_dwi_transform23" found cached. 210416-10:15:09,114 nipype.workflow INFO: [Node] Setting-up "_dwi_transform24" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform24". 210416-10:15:09,121 nipype.workflow INFO: [Node] Cached "_dwi_transform24" - collecting precomputed outputs 210416-10:15:09,122 nipype.workflow INFO: [Node] "_dwi_transform24" found cached. 210416-10:15:09,125 nipype.workflow INFO: [Node] Setting-up "_dwi_transform25" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform25". 210416-10:15:09,133 nipype.workflow INFO: [Node] Cached "_dwi_transform25" - collecting precomputed outputs 210416-10:15:09,133 nipype.workflow INFO: [Node] "_dwi_transform25" found cached. 210416-10:15:09,136 nipype.workflow INFO: [Node] Setting-up "_dwi_transform26" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform26". 210416-10:15:09,144 nipype.workflow INFO: [Node] Cached "_dwi_transform26" - collecting precomputed outputs 210416-10:15:09,145 nipype.workflow INFO: [Node] "_dwi_transform26" found cached. 210416-10:15:09,148 nipype.workflow INFO: [Node] Setting-up "_dwi_transform27" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform27". 210416-10:15:09,156 nipype.workflow INFO: [Node] Cached "_dwi_transform27" - collecting precomputed outputs 210416-10:15:09,157 nipype.workflow INFO: [Node] "_dwi_transform27" found cached. 210416-10:15:09,160 nipype.workflow INFO: [Node] Setting-up "_dwi_transform28" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform28". 210416-10:15:09,167 nipype.workflow INFO: [Node] Cached "_dwi_transform28" - collecting precomputed outputs 210416-10:15:09,167 nipype.workflow INFO: [Node] "_dwi_transform28" found cached. 210416-10:15:09,170 nipype.workflow INFO: [Node] Setting-up "_dwi_transform29" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform29". 210416-10:15:09,178 nipype.workflow INFO: [Node] Cached "_dwi_transform29" - collecting precomputed outputs 210416-10:15:09,179 nipype.workflow INFO: [Node] "_dwi_transform29" found cached. 210416-10:15:09,182 nipype.workflow INFO: [Node] Setting-up "_dwi_transform30" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform30". 210416-10:15:09,190 nipype.workflow INFO: [Node] Cached "_dwi_transform30" - collecting precomputed outputs 210416-10:15:09,190 nipype.workflow INFO: [Node] "_dwi_transform30" found cached. 210416-10:15:09,193 nipype.workflow INFO: [Node] Setting-up "_dwi_transform31" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform31". 210416-10:15:09,201 nipype.workflow INFO: [Node] Cached "_dwi_transform31" - collecting precomputed outputs 210416-10:15:09,202 nipype.workflow INFO: [Node] "_dwi_transform31" found cached. 210416-10:15:09,205 nipype.workflow INFO: [Node] Setting-up "_dwi_transform32" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform32". 210416-10:15:09,213 nipype.workflow INFO: [Node] Cached "_dwi_transform32" - collecting precomputed outputs 210416-10:15:09,213 nipype.workflow INFO: [Node] "_dwi_transform32" found cached. 210416-10:15:09,216 nipype.workflow INFO: [Node] Setting-up "_dwi_transform33" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform33". 210416-10:15:09,224 nipype.workflow INFO: [Node] Cached "_dwi_transform33" - collecting precomputed outputs 210416-10:15:09,225 nipype.workflow INFO: [Node] "_dwi_transform33" found cached. 210416-10:15:09,228 nipype.workflow INFO: [Node] Setting-up "_dwi_transform34" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform34". 210416-10:15:09,236 nipype.workflow INFO: [Node] Cached "_dwi_transform34" - collecting precomputed outputs 210416-10:15:09,237 nipype.workflow INFO: [Node] "_dwi_transform34" found cached. 210416-10:15:09,240 nipype.workflow INFO: [Node] Setting-up "_dwi_transform35" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform35". 210416-10:15:09,248 nipype.workflow INFO: [Node] Cached "_dwi_transform35" - collecting precomputed outputs 210416-10:15:09,249 nipype.workflow INFO: [Node] "_dwi_transform35" found cached. 210416-10:15:09,252 nipype.workflow INFO: [Node] Setting-up "_dwi_transform36" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform36". 210416-10:15:09,260 nipype.workflow INFO: [Node] Cached "_dwi_transform36" - collecting precomputed outputs 210416-10:15:09,261 nipype.workflow INFO: [Node] "_dwi_transform36" found cached. 210416-10:15:09,264 nipype.workflow INFO: [Node] Setting-up "_dwi_transform37" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform37". 210416-10:15:09,272 nipype.workflow INFO: [Node] Cached "_dwi_transform37" - collecting precomputed outputs 210416-10:15:09,273 nipype.workflow INFO: [Node] "_dwi_transform37" found cached. 210416-10:15:09,276 nipype.workflow INFO: [Node] Setting-up "_dwi_transform38" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform38". 210416-10:15:09,283 nipype.workflow INFO: [Node] Cached "_dwi_transform38" - collecting precomputed outputs 210416-10:15:09,283 nipype.workflow INFO: [Node] "_dwi_transform38" found cached. 210416-10:15:09,286 nipype.workflow INFO: [Node] Setting-up "_dwi_transform39" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform39". 210416-10:15:09,294 nipype.workflow INFO: [Node] Cached "_dwi_transform39" - collecting precomputed outputs 210416-10:15:09,295 nipype.workflow INFO: [Node] "_dwi_transform39" found cached. 210416-10:15:09,298 nipype.workflow INFO: [Node] Setting-up "_dwi_transform40" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform40". 210416-10:15:09,305 nipype.workflow INFO: [Node] Cached "_dwi_transform40" - collecting precomputed outputs 210416-10:15:09,306 nipype.workflow INFO: [Node] "_dwi_transform40" found cached. 210416-10:15:09,309 nipype.workflow INFO: [Node] Setting-up "_dwi_transform41" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform41". 210416-10:15:09,317 nipype.workflow INFO: [Node] Cached "_dwi_transform41" - collecting precomputed outputs 210416-10:15:09,317 nipype.workflow INFO: [Node] "_dwi_transform41" found cached. 210416-10:15:09,321 nipype.workflow INFO: [Node] Setting-up "_dwi_transform42" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform42". 210416-10:15:09,329 nipype.workflow INFO: [Node] Cached "_dwi_transform42" - collecting precomputed outputs 210416-10:15:09,329 nipype.workflow INFO: [Node] "_dwi_transform42" found cached. 210416-10:15:09,333 nipype.workflow INFO: [Node] Setting-up "_dwi_transform43" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform43". 210416-10:15:09,340 nipype.workflow INFO: [Node] Cached "_dwi_transform43" - collecting precomputed outputs 210416-10:15:09,341 nipype.workflow INFO: [Node] "_dwi_transform43" found cached. 210416-10:15:09,344 nipype.workflow INFO: [Node] Setting-up "_dwi_transform44" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform44". 210416-10:15:09,352 nipype.workflow INFO: [Node] Cached "_dwi_transform44" - collecting precomputed outputs 210416-10:15:09,352 nipype.workflow INFO: [Node] "_dwi_transform44" found cached. 210416-10:15:09,355 nipype.workflow INFO: [Node] Setting-up "_dwi_transform45" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform45". 210416-10:15:09,363 nipype.workflow INFO: [Node] Cached "_dwi_transform45" - collecting precomputed outputs 210416-10:15:09,363 nipype.workflow INFO: [Node] "_dwi_transform45" found cached. 210416-10:15:09,367 nipype.workflow INFO: [Node] Setting-up "_dwi_transform46" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform46". 210416-10:15:09,374 nipype.workflow INFO: [Node] Cached "_dwi_transform46" - collecting precomputed outputs 210416-10:15:09,375 nipype.workflow INFO: [Node] "_dwi_transform46" found cached. 210416-10:15:09,378 nipype.workflow INFO: [Node] Setting-up "_dwi_transform47" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform47". 210416-10:15:09,385 nipype.workflow INFO: [Node] Cached "_dwi_transform47" - collecting precomputed outputs 210416-10:15:09,386 nipype.workflow INFO: [Node] "_dwi_transform47" found cached. 210416-10:15:09,389 nipype.workflow INFO: [Node] Setting-up "_dwi_transform48" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform48". 210416-10:15:09,397 nipype.workflow INFO: [Node] Cached "_dwi_transform48" - collecting precomputed outputs 210416-10:15:09,398 nipype.workflow INFO: [Node] "_dwi_transform48" found cached. 210416-10:15:09,401 nipype.workflow INFO: [Node] Setting-up "_dwi_transform49" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform49". 210416-10:15:09,410 nipype.workflow INFO: [Node] Cached "_dwi_transform49" - collecting precomputed outputs 210416-10:15:09,410 nipype.workflow INFO: [Node] "_dwi_transform49" found cached. 210416-10:15:09,413 nipype.workflow INFO: [Node] Setting-up "_dwi_transform50" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform50". 210416-10:15:09,421 nipype.workflow INFO: [Node] Cached "_dwi_transform50" - collecting precomputed outputs 210416-10:15:09,422 nipype.workflow INFO: [Node] "_dwi_transform50" found cached. 210416-10:15:09,425 nipype.workflow INFO: [Node] Setting-up "_dwi_transform51" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform51". 210416-10:15:09,432 nipype.workflow INFO: [Node] Cached "_dwi_transform51" - collecting precomputed outputs 210416-10:15:09,433 nipype.workflow INFO: [Node] "_dwi_transform51" found cached. 210416-10:15:09,436 nipype.workflow INFO: [Node] Setting-up "_dwi_transform52" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform52". 210416-10:15:09,444 nipype.workflow INFO: [Node] Cached "_dwi_transform52" - collecting precomputed outputs 210416-10:15:09,445 nipype.workflow INFO: [Node] "_dwi_transform52" found cached. 210416-10:15:09,448 nipype.workflow INFO: [Node] Setting-up "_dwi_transform53" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform53". 210416-10:15:09,456 nipype.workflow INFO: [Node] Cached "_dwi_transform53" - collecting precomputed outputs 210416-10:15:09,456 nipype.workflow INFO: [Node] "_dwi_transform53" found cached. 210416-10:15:09,460 nipype.workflow INFO: [Node] Setting-up "_dwi_transform54" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform54". 210416-10:15:09,468 nipype.workflow INFO: [Node] Cached "_dwi_transform54" - collecting precomputed outputs 210416-10:15:09,469 nipype.workflow INFO: [Node] "_dwi_transform54" found cached. 210416-10:15:09,472 nipype.workflow INFO: [Node] Setting-up "_dwi_transform55" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform55". 210416-10:15:09,480 nipype.workflow INFO: [Node] Cached "_dwi_transform55" - collecting precomputed outputs 210416-10:15:09,480 nipype.workflow INFO: [Node] "_dwi_transform55" found cached. 210416-10:15:09,483 nipype.workflow INFO: [Node] Setting-up "_dwi_transform56" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform56". 210416-10:15:09,491 nipype.workflow INFO: [Node] Cached "_dwi_transform56" - collecting precomputed outputs 210416-10:15:09,491 nipype.workflow INFO: [Node] "_dwi_transform56" found cached. 210416-10:15:09,494 nipype.workflow INFO: [Node] Setting-up "_dwi_transform57" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform57". 210416-10:15:09,502 nipype.workflow INFO: [Node] Cached "_dwi_transform57" - collecting precomputed outputs 210416-10:15:09,503 nipype.workflow INFO: [Node] "_dwi_transform57" found cached. 210416-10:15:09,506 nipype.workflow INFO: [Node] Setting-up "_dwi_transform58" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform58". 210416-10:15:09,514 nipype.workflow INFO: [Node] Cached "_dwi_transform58" - collecting precomputed outputs 210416-10:15:09,515 nipype.workflow INFO: [Node] "_dwi_transform58" found cached. 210416-10:15:09,519 nipype.workflow INFO: [Node] Setting-up "_dwi_transform59" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform59". 210416-10:15:09,527 nipype.workflow INFO: [Node] Cached "_dwi_transform59" - collecting precomputed outputs 210416-10:15:09,527 nipype.workflow INFO: [Node] "_dwi_transform59" found cached. 210416-10:15:09,531 nipype.workflow INFO: [Node] Setting-up "_dwi_transform60" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform60". 210416-10:15:09,538 nipype.workflow INFO: [Node] Cached "_dwi_transform60" - collecting precomputed outputs 210416-10:15:09,538 nipype.workflow INFO: [Node] "_dwi_transform60" found cached. 210416-10:15:09,541 nipype.workflow INFO: [Node] Setting-up "_dwi_transform61" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform61". 210416-10:15:09,549 nipype.workflow INFO: [Node] Cached "_dwi_transform61" - collecting precomputed outputs 210416-10:15:09,550 nipype.workflow INFO: [Node] "_dwi_transform61" found cached. 210416-10:15:09,553 nipype.workflow INFO: [Node] Setting-up "_dwi_transform62" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform62". 210416-10:15:09,561 nipype.workflow INFO: [Node] Cached "_dwi_transform62" - collecting precomputed outputs 210416-10:15:09,562 nipype.workflow INFO: [Node] "_dwi_transform62" found cached. 210416-10:15:09,565 nipype.workflow INFO: [Node] Setting-up "_dwi_transform63" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform63". 210416-10:15:09,573 nipype.workflow INFO: [Node] Cached "_dwi_transform63" - collecting precomputed outputs 210416-10:15:09,574 nipype.workflow INFO: [Node] "_dwi_transform63" found cached. 210416-10:15:09,577 nipype.workflow INFO: [Node] Setting-up "_dwi_transform64" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/dwi_transform/mapflow/_dwi_transform64". 210416-10:15:09,585 nipype.workflow INFO: [Node] Cached "_dwi_transform64" - collecting precomputed outputs 210416-10:15:09,586 nipype.workflow INFO: [Node] "_dwi_transform64" found cached. 210416-10:15:09,629 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.dwi_transform". 210416-10:15:09,692 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:10,430 nipype.workflow INFO: [Job 81] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.dwi_transform). 210416-10:15:10,436 nipype.workflow INFO: [MultiProc] Running 3 tasks, and 1 jobs ready. Free memory (GB): 53.33/56.53, Free processors: 22/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.cnr_tfm * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.rotate_gradients * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:15:11,139 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:12,334 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:12,357 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.cnr_tfm". 210416-10:15:12,431 nipype.workflow INFO: [Job 110] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.cnr_tfm). 210416-10:15:12,437 nipype.workflow INFO: [MultiProc] Running 3 tasks, and 1 jobs ready. Free memory (GB): 50.83/56.53, Free processors: 22/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.merge * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.rotate_gradients * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:15:12,521 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.dwi_derivatives_wf.ds_cnr_map_t1" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/dwi_derivatives_wf/ds_cnr_map_t1". 210416-10:15:12,544 nipype.workflow INFO: [Node] Running "ds_cnr_map_t1" ("qsiprep.interfaces.bids.DerivativesDataSink") 210416-10:15:12,563 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.dwi_derivatives_wf.ds_cnr_map_t1". 210416-10:15:12,563 nipype.workflow INFO: [Job 111] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.dwi_derivatives_wf.ds_cnr_map_t1). 210416-10:15:13,684 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:14,433 nipype.workflow INFO: [MultiProc] Running 3 tasks, and 0 jobs ready. Free memory (GB): 50.83/56.53, Free processors: 22/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.merge * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.rotate_gradients * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:15:15,136 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:16,518 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:17,964 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:19,298 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:19,332 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.merge" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/merge". 210416-10:15:19,483 nipype.workflow INFO: [Node] Running "merge" ("qsiprep.interfaces.nilearn.Merge") 210416-10:15:20,610 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:21,955 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:23,265 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:24,715 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:26,606 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:27,924 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:29,194 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:30,548 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:31,851 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:33,191 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:34,564 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:35,853 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:37,550 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:38,859 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:40,152 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:41,534 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.merge". 210416-10:15:41,638 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:42,470 nipype.workflow INFO: [Job 82] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.merge). 210416-10:15:42,477 nipype.workflow INFO: [MultiProc] Running 2 tasks, and 2 jobs ready. Free memory (GB): 54.33/56.53, Free processors: 23/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.rotate_gradients * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:15:42,567 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.dwi_derivatives_wf.ds_dwi_t1" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/dwi_derivatives_wf/ds_dwi_t1". 210416-10:15:42,588 nipype.workflow INFO: [Node] Running "ds_dwi_t1" ("qsiprep.interfaces.bids.DerivativesDataSink") 210416-10:15:43,13 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:44,307 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:45,668 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:47,83 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:48,573 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:49,990 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:51,371 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:53,120 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:54,613 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:56,8 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:57,422 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:15:58,838 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:16:00,221 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:16:01,543 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:16:02,902 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:16:04,294 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:16:05,603 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:16:06,884 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:16:08,149 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:16:09,462 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:16:10,754 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:16:12,101 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:16:13,402 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:16:14,697 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:16:16,155 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:16:17,437 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:16:18,704 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:16:20,300 nipype.interface INFO: antsApplyTransformsToPoints --dimensionality 3 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_pre_rotation.csv --output /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/transform0GenericAffine_post_rotation.csv --transform [/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_preproc_wf/b0_anat_coreg/b0_to_anat/transform0GenericAffine.mat, 1] 210416-10:16:21,563 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.rotate_gradients". 210416-10:16:27,784 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.dwi_derivatives_wf.ds_dwi_t1". 210416-10:16:27,786 nipype.workflow INFO: [Job 83] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.dwi_derivatives_wf.ds_dwi_t1). 210416-10:16:27,913 nipype.workflow INFO: [Job 93] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.rotate_gradients). 210416-10:16:27,914 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.extract_b0_series" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/extract_b0_series". 210416-10:16:27,916 nipype.workflow INFO: [MultiProc] Running 2 tasks, and 5 jobs ready. Free memory (GB): 54.33/56.53, Free processors: 23/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.extract_b0_series * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:16:28,4 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.dwi_derivatives_wf.ds_bvecs_t1" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/dwi_derivatives_wf/ds_bvecs_t1". 210416-10:16:28,24 nipype.workflow INFO: [Node] Running "ds_bvecs_t1" ("qsiprep.interfaces.bids.DerivativesDataSink") 210416-10:16:28,42 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.dwi_derivatives_wf.ds_bvecs_t1". 210416-10:16:28,43 nipype.workflow INFO: [Job 94] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.dwi_derivatives_wf.ds_bvecs_t1). 210416-10:16:28,52 nipype.workflow INFO: [Node] Running "extract_b0_series" ("qsiprep.interfaces.gradients.ExtractB0s") 210416-10:16:28,134 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.dwi_derivatives_wf.ds_bvals_t1" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/dwi_derivatives_wf/ds_bvals_t1". 210416-10:16:28,154 nipype.workflow INFO: [Node] Running "ds_bvals_t1" ("qsiprep.interfaces.bids.DerivativesDataSink") 210416-10:16:28,175 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.dwi_derivatives_wf.ds_bvals_t1". 210416-10:16:28,175 nipype.workflow INFO: [Job 95] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.dwi_derivatives_wf.ds_bvals_t1). 210416-10:16:28,266 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.gradient_plot" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/gradient_plot". 210416-10:16:28,622 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.extract_b0_series". 210416-10:16:28,637 nipype.workflow INFO: [Node] Running "gradient_plot" ("qsiprep.interfaces.reports.GradientPlot") 210416-10:17:41,498 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.gradient_plot". 210416-10:17:41,499 nipype.workflow INFO: [Job 96] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.gradient_plot). 210416-10:17:41,614 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.gtab_t1" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/gtab_t1". 210416-10:17:41,615 nipype.workflow INFO: [Job 84] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.extract_b0_series). 210416-10:17:41,618 nipype.workflow INFO: [MultiProc] Running 3 tasks, and 2 jobs ready. Free memory (GB): 54.13/56.53, Free processors: 22/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_src * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.gtab_t1 * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:17:41,626 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_src" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/calculate_qc/raw_src". 210416-10:17:41,633 nipype.workflow INFO: [Node] Running "gtab_t1" ("qsiprep.interfaces.mrtrix.MRTrixGradientTable") 210416-10:17:41,651 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.gtab_t1". 210416-10:17:41,658 nipype.workflow INFO: [Node] Running "raw_src" ("qsiprep.interfaces.dsi_studio.DSIStudioCreateSrc"), a CommandLine Interface with command: dsi_studio --action=src --bval=/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/rotated.bval --bvec=/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/rotate_gradients/rotated.bvec --source=/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/merge/vol0000_trans_merged.nii --threads=1 --output=/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/calculate_qc/raw_src/vol0000_trans_merged.src.gz 210416-10:17:41,706 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.ds_report_gradients" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/ds_report_gradients". 210416-10:17:41,709 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.final_b0_ref.t1_mask_to_b0" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/final_b0_ref/t1_mask_to_b0". 210416-10:17:41,737 nipype.workflow INFO: [Node] Running "ds_report_gradients" ("qsiprep.interfaces.bids.DerivativesDataSink") 210416-10:17:41,747 nipype.workflow INFO: [Node] Running "t1_mask_to_b0" ("nipype.interfaces.ants.resampling.ApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --float 0 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/skullstrip_wf/rigid_acpc_resample_mask/highres001_BrainExtractionMask_trans.nii.gz --interpolation Linear --output highres001_BrainExtractionMask_trans_trans.nii.gz --reference-image /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/extract_b0_series/vol0000_trans_merged_b0_series_mean.nii --transform identity 210416-10:17:41,788 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.ds_report_gradients". 210416-10:17:41,792 nipype.workflow INFO: [Job 97] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.ds_report_gradients). 210416-10:17:43,619 nipype.workflow INFO: [Job 99] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.gtab_t1). 210416-10:17:43,623 nipype.workflow INFO: [MultiProc] Running 3 tasks, and 1 jobs ready. Free memory (GB): 54.13/56.53, Free processors: 22/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.final_b0_ref.t1_mask_to_b0 * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_src * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:17:43,712 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.dwi_derivatives_wf.ds_gradient_table_t1" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/dwi_derivatives_wf/ds_gradient_table_t1". 210416-10:17:43,732 nipype.workflow INFO: [Node] Running "ds_gradient_table_t1" ("qsiprep.interfaces.bids.DerivativesDataSink") 210416-10:17:43,756 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.dwi_derivatives_wf.ds_gradient_table_t1". 210416-10:17:43,756 nipype.workflow INFO: [Job 100] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.dwi_derivatives_wf.ds_gradient_table_t1). 210416-10:17:44,848 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.final_b0_ref.t1_mask_to_b0". 210416-10:17:45,620 nipype.workflow INFO: [Job 85] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.final_b0_ref.t1_mask_to_b0). 210416-10:17:45,623 nipype.workflow INFO: [MultiProc] Running 2 tasks, and 1 jobs ready. Free memory (GB): 54.33/56.53, Free processors: 23/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_src * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:17:45,711 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.final_b0_ref.enhance_and_mask_b0" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/final_b0_ref/enhance_and_mask_b0". 210416-10:17:45,733 nipype.workflow INFO: [Node] Running "enhance_and_mask_b0" ("qsiprep.interfaces.nilearn.EnhanceAndSkullstripB0") 210416-10:17:47,627 nipype.workflow INFO: [MultiProc] Running 3 tasks, and 0 jobs ready. Free memory (GB): 54.13/56.53, Free processors: 22/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.final_b0_ref.enhance_and_mask_b0 * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_src * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:18:14,876 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_src". 210416-10:18:15,649 nipype.workflow INFO: [Job 101] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_src). 210416-10:18:15,652 nipype.workflow INFO: [MultiProc] Running 2 tasks, and 2 jobs ready. Free memory (GB): 54.33/56.53, Free processors: 23/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.final_b0_ref.enhance_and_mask_b0 * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:18:15,746 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_gqi" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/calculate_qc/raw_gqi". 210416-10:18:15,768 nipype.workflow INFO: [Node] Running "raw_gqi" ("qsiprep.interfaces.dsi_studio.DSIStudioGQIReconstruction"), a CommandLine Interface with command: dsi_studio --action=rec --method=4 --check_btable=0 --source=/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/calculate_qc/raw_gqi/vol0000_trans_merged.src.gz --threads=1 --num_fiber=3 --record_odf=1 --param0=1.2500 --thread_count=1 210416-10:18:17,89 nipype.interface WARNING: Degenerate Mask case. Using compute_epi_mask 210416-10:18:17,653 nipype.workflow INFO: [MultiProc] Running 4 tasks, and 0 jobs ready. Free memory (GB): 53.93/56.53, Free processors: 21/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_src_qc * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_gqi * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.final_b0_ref.enhance_and_mask_b0 * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:18:24,608 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_src_qc" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/calculate_qc/raw_src_qc". 210416-10:18:25,268 nipype.workflow INFO: [Node] Running "raw_src_qc" ("qsiprep.interfaces.dsi_studio.DSIStudioSrcQC") 210416-10:18:25,281 nipype.workflow WARNING: Storing result file without outputs 210416-10:18:25,284 nipype.workflow WARNING: [Node] Error on "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_src_qc" (/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/calculate_qc/raw_src_qc) 210416-10:18:25,663 nipype.workflow ERROR: Node raw_src_qc failed to run on host node309. 210416-10:18:25,673 nipype.workflow ERROR: Saving crash info to /sngl/qsiprep-output/qsiprep/sub-control01/log/20210416-094111_6865a7b6-176e-4c40-807f-674909d16ce1/crash-20210416-101825-fatx405-raw_src_qc-cf23a38f-0d31-4f60-b10e-f1f2b039a4aa.txt Traceback (most recent call last): File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node result["result"] = node.run(updatehash=updatehash) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run result = self._run_interface(execute=True) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 635, in _run_interface return self._run_command(execute) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 741, in _run_command result = self._interface.run(cwd=outdir) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/interfaces/base/core.py", line 434, in run runtime = self._run_interface(runtime) File "/usr/local/miniconda/lib/python3.7/site-packages/qsiprep/interfaces/dsi_studio.py", line 108, in _run_interface os.link(self.inputs.src_file, linked_src_file) PermissionError: [Errno 1] Operation not permitted: '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/calculate_qc/raw_src_qc/vol0000_trans_merged.src.gz' -> '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/calculate_qc/raw_src_qc/src_qc/vol0000_trans_merged.src.gz' 210416-10:18:25,684 nipype.workflow INFO: [MultiProc] Running 3 tasks, and 0 jobs ready. Free memory (GB): 54.13/56.53, Free processors: 22/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_gqi * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.final_b0_ref.enhance_and_mask_b0 * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:18:31,784 nipype.interface WARNING: Masking appears to have failed. Using a backup method 210416-10:18:43,922 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.final_b0_ref.enhance_and_mask_b0". 210416-10:18:45,681 nipype.workflow INFO: [Job 86] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.final_b0_ref.enhance_and_mask_b0). 210416-10:18:45,685 nipype.workflow INFO: [MultiProc] Running 2 tasks, and 5 jobs ready. Free memory (GB): 54.33/56.53, Free processors: 23/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_gqi * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:18:45,768 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.dwi_derivatives_wf.ds_dwi_mask_t1" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/dwi_derivatives_wf/ds_dwi_mask_t1". 210416-10:18:45,791 nipype.workflow INFO: [Node] Running "ds_dwi_mask_t1" ("qsiprep.interfaces.bids.DerivativesDataSink") 210416-10:18:45,975 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.dwi_derivatives_wf.ds_dwi_mask_t1". 210416-10:18:45,976 nipype.workflow INFO: [Job 87] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.dwi_derivatives_wf.ds_dwi_mask_t1). 210416-10:18:46,61 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.dwi_derivatives_wf.ds_t1_b0_ref" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/dwi_derivatives_wf/ds_t1_b0_ref". 210416-10:18:46,82 nipype.workflow INFO: [Node] Running "ds_t1_b0_ref" ("qsiprep.interfaces.bids.DerivativesDataSink") 210416-10:19:09,119 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.dwi_derivatives_wf.ds_t1_b0_ref". 210416-10:19:09,120 nipype.workflow INFO: [Job 88] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.dwi_derivatives_wf.ds_t1_b0_ref). 210416-10:19:09,253 nipype.workflow INFO: [MultiProc] Running 5 tasks, and 0 jobs ready. Free memory (GB): 53.83/56.53, Free processors: 20/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.interactive_report_wf.tensor_fit * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.final_b0_ref.b0ref_reportlet * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.t1_dice_calc.downsample_t1_mask * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_gqi * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:19:09,317 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.t1_dice_calc.downsample_t1_mask" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/t1_dice_calc/downsample_t1_mask". 210416-10:19:13,590 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.final_b0_ref.b0ref_reportlet" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/final_b0_ref/b0ref_reportlet". 210416-10:19:16,999 nipype.workflow INFO: [Node] Running "downsample_t1_mask" ("nipype.interfaces.afni.utils.Resample"), a CommandLine Interface with command: 3dresample -master /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/final_b0_ref/enhance_and_mask_b0/vol0000_trans_merged_b0_series_mean_mask.nii -prefix highres001_BrainExtractionMask_trans_resample.nii.gz -rmode NN -inset /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/t1_dice_calc/downsample_t1_mask/highres001_BrainExtractionMask_trans.nii.gz 210416-10:19:17,5 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.interactive_report_wf.tensor_fit" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/interactive_report_wf/tensor_fit". 210416-10:19:17,8 nipype.workflow INFO: [Node] Running "b0ref_reportlet" ("qsiprep.niworkflows.interfaces.registration.SimpleBeforeAfterRPT") 210416-10:19:17,45 nipype.workflow INFO: [Node] Running "tensor_fit" ("qsiprep.interfaces.dipy.TensorReconstruction") 210416-10:19:18,445 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.t1_dice_calc.downsample_t1_mask". 210416-10:19:19,262 nipype.workflow INFO: [Job 89] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.t1_dice_calc.downsample_t1_mask). 210416-10:19:19,266 nipype.workflow INFO: [MultiProc] Running 4 tasks, and 1 jobs ready. Free memory (GB): 54.03/56.53, Free processors: 21/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.interactive_report_wf.tensor_fit * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.final_b0_ref.b0ref_reportlet * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_gqi * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:19:21,266 nipype.workflow INFO: [MultiProc] Running 5 tasks, and 0 jobs ready. Free memory (GB): 53.83/56.53, Free processors: 20/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.t1_dice_calc.calculate_dice * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.interactive_report_wf.tensor_fit * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.final_b0_ref.b0ref_reportlet * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_gqi * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:19:28,468 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.t1_dice_calc.calculate_dice" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/t1_dice_calc/calculate_dice". 210416-10:19:28,498 nipype.workflow INFO: [Node] Running "calculate_dice" ("qsiprep.interfaces.anatomical.DiceOverlap") 210416-10:19:29,37 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.t1_dice_calc.calculate_dice". 210416-10:19:29,272 nipype.workflow INFO: [Job 90] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.t1_dice_calc.calculate_dice). 210416-10:19:29,275 nipype.workflow INFO: [MultiProc] Running 4 tasks, and 0 jobs ready. Free memory (GB): 54.03/56.53, Free processors: 21/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.interactive_report_wf.tensor_fit * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.final_b0_ref.b0ref_reportlet * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_gqi * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:19:33,947 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.final_b0_ref.b0ref_reportlet". 210416-10:19:35,278 nipype.workflow INFO: [Job 91] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.final_b0_ref.b0ref_reportlet). 210416-10:19:35,281 nipype.workflow INFO: [MultiProc] Running 3 tasks, and 1 jobs ready. Free memory (GB): 54.13/56.53, Free processors: 22/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.interactive_report_wf.tensor_fit * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_gqi * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:19:35,367 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.final_b0_ref.ds_report_b0_mask" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/final_b0_ref/ds_report_b0_mask". 210416-10:19:35,386 nipype.workflow INFO: [Node] Running "ds_report_b0_mask" ("qsiprep.interfaces.bids.DerivativesDataSink") 210416-10:19:35,431 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.final_b0_ref.ds_report_b0_mask". 210416-10:19:35,432 nipype.workflow INFO: [Job 92] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.final_b0_ref.ds_report_b0_mask). 210416-10:19:37,281 nipype.workflow INFO: [MultiProc] Running 3 tasks, and 0 jobs ready. Free memory (GB): 54.13/56.53, Free processors: 22/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.interactive_report_wf.tensor_fit * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_gqi * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni 210416-10:19:40,2 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni". 210416-10:19:41,284 nipype.workflow INFO: [Job 52] Completed (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.t1_2_mni). 210416-10:19:41,287 nipype.workflow INFO: [MultiProc] Running 2 tasks, and 7 jobs ready. Free memory (GB): 56.13/56.53, Free processors: 30/32. Currently running: * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.interactive_report_wf.tensor_fit * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_gqi 210416-10:19:41,370 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_reports_wf.ds_t1_2_mni_report" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/anat_reports_wf/ds_t1_2_mni_report". 210416-10:19:41,391 nipype.workflow INFO: [Node] Running "ds_t1_2_mni_report" ("qsiprep.workflows.anatomical.DerivativesDataSink") 210416-10:19:41,423 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_reports_wf.ds_t1_2_mni_report". 210416-10:19:41,424 nipype.workflow INFO: [Job 53] Completed (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_reports_wf.ds_t1_2_mni_report). 210416-10:19:41,508 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_mni" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/anat_derivatives_wf/ds_t1_mni". 210416-10:19:41,529 nipype.workflow INFO: [Node] Running "ds_t1_mni" ("qsiprep.workflows.anatomical.DerivativesDataSink") 210416-10:19:41,605 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_mni". 210416-10:19:41,605 nipype.workflow INFO: [Job 54] Completed (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_mni). 210416-10:19:41,689 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_mni_inv_warp" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/anat_derivatives_wf/ds_t1_mni_inv_warp". 210416-10:19:41,707 nipype.workflow INFO: [Node] Running "ds_t1_mni_inv_warp" ("qsiprep.workflows.anatomical.DerivativesDataSink") 210416-10:19:42,251 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_mni_inv_warp". 210416-10:19:42,251 nipype.workflow INFO: [Job 55] Completed (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_mni_inv_warp). 210416-10:19:42,335 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_mni_warp" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/anat_derivatives_wf/ds_t1_mni_warp". 210416-10:19:42,353 nipype.workflow INFO: [Node] Running "ds_t1_mni_warp" ("qsiprep.workflows.anatomical.DerivativesDataSink") 210416-10:19:42,888 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_mni_warp". 210416-10:19:42,889 nipype.workflow INFO: [Job 56] Completed (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_t1_mni_warp). 210416-10:19:43,2 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_seg" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/mni_seg". 210416-10:19:43,28 nipype.workflow INFO: [Node] Running "mni_seg" ("qsiprep.niworkflows.interfaces.fixes.FixHeaderApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --dimensionality 3 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/t1_seg/highres001_BrainExtractionBrain_trans_seg.nii.gz --interpolation MultiLabel --output highres001_BrainExtractionBrain_trans_seg_trans.nii.gz --reference-image /usr/local/miniconda/lib/python3.7/site-packages/qsiprep/data/mni_1mm_t1w_lps.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/t1_2_mni/ants_t1_to_mniComposite.h5 210416-10:19:43,287 nipype.workflow INFO: [MultiProc] Running 4 tasks, and 3 jobs ready. Free memory (GB): 55.73/56.53, Free processors: 28/32. Currently running: * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_seg * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_mask * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.interactive_report_wf.tensor_fit * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_gqi 210416-10:19:45,288 nipype.workflow INFO: [MultiProc] Running 7 tasks, and 0 jobs ready. Free memory (GB): 55.13/56.53, Free processors: 25/32. Currently running: * _mni_tpms2 * _mni_tpms1 * _mni_tpms0 * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_seg * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_mask * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.interactive_report_wf.tensor_fit * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_gqi 210416-10:19:47,578 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_mask" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/mni_mask". 210416-10:19:47,605 nipype.workflow INFO: [Node] Running "mni_mask" ("qsiprep.niworkflows.interfaces.fixes.FixHeaderApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --dimensionality 3 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/skullstrip_wf/rigid_acpc_resample_mask/highres001_BrainExtractionMask_trans.nii.gz --interpolation MultiLabel --output highres001_BrainExtractionMask_trans_trans.nii.gz --reference-image /usr/local/miniconda/lib/python3.7/site-packages/qsiprep/data/mni_1mm_t1w_lps.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/t1_2_mni/ants_t1_to_mniComposite.h5 210416-10:19:47,742 nipype.workflow INFO: [Node] Setting-up "_mni_tpms2" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/mni_tpms/mapflow/_mni_tpms2". 210416-10:19:47,745 nipype.workflow INFO: [Node] Setting-up "_mni_tpms0" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/mni_tpms/mapflow/_mni_tpms0". 210416-10:19:47,763 nipype.workflow INFO: [Node] Running "_mni_tpms2" ("qsiprep.niworkflows.interfaces.fixes.FixHeaderApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --dimensionality 3 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/t1_seg/highres001_BrainExtractionBrain_trans_prob_2.nii.gz --interpolation Linear --output highres001_BrainExtractionBrain_trans_prob_2_trans.nii.gz --reference-image /usr/local/miniconda/lib/python3.7/site-packages/qsiprep/data/mni_1mm_t1w_lps.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/t1_2_mni/ants_t1_to_mniComposite.h5 210416-10:19:47,764 nipype.workflow INFO: [Node] Running "_mni_tpms0" ("qsiprep.niworkflows.interfaces.fixes.FixHeaderApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --dimensionality 3 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/t1_seg/highres001_BrainExtractionBrain_trans_prob_0.nii.gz --interpolation Linear --output highres001_BrainExtractionBrain_trans_prob_0_trans.nii.gz --reference-image /usr/local/miniconda/lib/python3.7/site-packages/qsiprep/data/mni_1mm_t1w_lps.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/t1_2_mni/ants_t1_to_mniComposite.h5 210416-10:19:47,825 nipype.workflow INFO: [Node] Setting-up "_mni_tpms1" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/mni_tpms/mapflow/_mni_tpms1". 210416-10:19:47,847 nipype.workflow INFO: [Node] Running "_mni_tpms1" ("qsiprep.niworkflows.interfaces.fixes.FixHeaderApplyTransforms"), a CommandLine Interface with command: antsApplyTransforms --default-value 0 --dimensionality 3 --float 1 --input /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/t1_seg/highres001_BrainExtractionBrain_trans_prob_1.nii.gz --interpolation Linear --output highres001_BrainExtractionBrain_trans_prob_1_trans.nii.gz --reference-image /usr/local/miniconda/lib/python3.7/site-packages/qsiprep/data/mni_1mm_t1w_lps.nii.gz --transform /sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/t1_2_mni/ants_t1_to_mniComposite.h5 210416-10:19:53,782 nipype.workflow INFO: [Node] Finished "_mni_tpms2". 210416-10:19:53,854 nipype.workflow INFO: [Node] Finished "_mni_tpms1". 210416-10:19:54,352 nipype.workflow INFO: [Node] Finished "_mni_tpms0". 210416-10:19:55,295 nipype.workflow INFO: [Job 192] Completed (_mni_tpms0). 210416-10:19:55,297 nipype.workflow INFO: [Job 193] Completed (_mni_tpms1). 210416-10:19:55,298 nipype.workflow INFO: [Job 194] Completed (_mni_tpms2). 210416-10:19:55,300 nipype.workflow INFO: [MultiProc] Running 4 tasks, and 1 jobs ready. Free memory (GB): 55.73/56.53, Free processors: 28/32. Currently running: * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_seg * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_mask * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.interactive_report_wf.tensor_fit * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_gqi 210416-10:19:57,299 nipype.workflow INFO: [MultiProc] Running 5 tasks, and 0 jobs ready. Free memory (GB): 55.53/56.53, Free processors: 27/32. Currently running: * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_tpms * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_seg * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_mask * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.interactive_report_wf.tensor_fit * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_gqi 210416-10:20:00,115 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_tpms" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/mni_tpms". 210416-10:20:00,143 nipype.workflow INFO: [Node] Setting-up "_mni_tpms0" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/mni_tpms/mapflow/_mni_tpms0". 210416-10:20:00,151 nipype.workflow INFO: [Node] Cached "_mni_tpms0" - collecting precomputed outputs 210416-10:20:00,152 nipype.workflow INFO: [Node] "_mni_tpms0" found cached. 210416-10:20:00,156 nipype.workflow INFO: [Node] Setting-up "_mni_tpms1" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/mni_tpms/mapflow/_mni_tpms1". 210416-10:20:00,163 nipype.workflow INFO: [Node] Cached "_mni_tpms1" - collecting precomputed outputs 210416-10:20:00,164 nipype.workflow INFO: [Node] "_mni_tpms1" found cached. 210416-10:20:00,168 nipype.workflow INFO: [Node] Setting-up "_mni_tpms2" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/mni_tpms/mapflow/_mni_tpms2". 210416-10:20:00,175 nipype.workflow INFO: [Node] Cached "_mni_tpms2" - collecting precomputed outputs 210416-10:20:00,176 nipype.workflow INFO: [Node] "_mni_tpms2" found cached. 210416-10:20:00,183 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_tpms". 210416-10:20:01,301 nipype.workflow INFO: [Job 119] Completed (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_tpms). 210416-10:20:01,304 nipype.workflow INFO: [MultiProc] Running 4 tasks, and 1 jobs ready. Free memory (GB): 55.73/56.53, Free processors: 28/32. Currently running: * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_seg * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_mask * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.interactive_report_wf.tensor_fit * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_gqi 210416-10:20:01,388 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_mni_tpms" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/anat_derivatives_wf/ds_mni_tpms". 210416-10:20:01,548 nipype.workflow INFO: [Node] Running "ds_mni_tpms" ("qsiprep.workflows.anatomical.DerivativesDataSink") 210416-10:20:02,101 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_mni_tpms". 210416-10:20:02,110 nipype.workflow INFO: [Job 120] Completed (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_mni_tpms). 210416-10:20:03,303 nipype.workflow INFO: [MultiProc] Running 4 tasks, and 0 jobs ready. Free memory (GB): 55.73/56.53, Free processors: 28/32. Currently running: * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_seg * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_mask * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.interactive_report_wf.tensor_fit * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_gqi current dir /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/calculate_qc/raw_gqi input src /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/calculate_qc/raw_gqi/vol0000_trans_merged.src.gz split src name vol0000_trans_merged.src.gz search target /sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/calculate_qc/raw_gqi/vol0000_trans_merged.src.gz*gqi*.fib.gz 210416-10:20:10,136 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_gqi". 210416-10:20:11,310 nipype.workflow INFO: [Job 102] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_gqi). 210416-10:20:11,313 nipype.workflow INFO: [MultiProc] Running 3 tasks, and 1 jobs ready. Free memory (GB): 55.93/56.53, Free processors: 29/32. Currently running: * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_seg * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_mask * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.interactive_report_wf.tensor_fit 210416-10:20:11,397 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_fib_qc" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/calculate_qc/raw_fib_qc". 210416-10:20:11,414 nipype.workflow INFO: [Node] Running "raw_fib_qc" ("qsiprep.interfaces.dsi_studio.DSIStudioFibQC") 210416-10:20:11,418 nipype.workflow WARNING: Storing result file without outputs 210416-10:20:11,421 nipype.workflow WARNING: [Node] Error on "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_fib_qc" (/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/calculate_qc/raw_fib_qc) 210416-10:20:13,314 nipype.workflow ERROR: Node raw_fib_qc failed to run on host node309. 210416-10:20:13,324 nipype.workflow ERROR: Saving crash info to /sngl/qsiprep-output/qsiprep/sub-control01/log/20210416-094111_6865a7b6-176e-4c40-807f-674909d16ce1/crash-20210416-102013-fatx405-raw_fib_qc-47ec961b-0f05-4ff8-a13c-279680d508d3.txt Traceback (most recent call last): File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/plugins/multiproc.py", line 67, in run_node result["result"] = node.run(updatehash=updatehash) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 516, in run result = self._run_interface(execute=True) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 635, in _run_interface return self._run_command(execute) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 741, in _run_command result = self._interface.run(cwd=outdir) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/interfaces/base/core.py", line 434, in run runtime = self._run_interface(runtime) File "/usr/local/miniconda/lib/python3.7/site-packages/qsiprep/interfaces/dsi_studio.py", line 135, in _run_interface os.link(self.inputs.fib_file, linked_fib_file) PermissionError: [Errno 1] Operation not permitted: '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/calculate_qc/raw_gqi/vol0000_trans_merged.src.gz.odf.gqi.1.25.fib.gz' -> '/sngl/scratch/qsiprep_wf/single_subject_control01_wf/dwi_finalize_wf/transform_dwis_t1/calculate_qc/raw_fib_qc/vol0000_trans_merged.src.gz.odf.gqi.1.25.fib.gz' 210416-10:20:13,341 nipype.workflow INFO: [MultiProc] Running 3 tasks, and 0 jobs ready. Free memory (GB): 55.93/56.53, Free processors: 29/32. Currently running: * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_seg * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_mask * qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.interactive_report_wf.tensor_fit 210416-10:20:15,716 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.interactive_report_wf.tensor_fit". 210416-10:20:17,316 nipype.workflow INFO: [Job 98] Completed (qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.interactive_report_wf.tensor_fit). 210416-10:20:17,319 nipype.workflow INFO: [MultiProc] Running 2 tasks, and 0 jobs ready. Free memory (GB): 56.13/56.53, Free processors: 30/32. Currently running: * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_seg * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_mask 210416-10:21:41,150 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_mask". 210416-10:21:41,399 nipype.workflow INFO: [Job 57] Completed (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_mask). 210416-10:21:41,402 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 1 jobs ready. Free memory (GB): 56.33/56.53, Free processors: 31/32. Currently running: * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_seg 210416-10:21:41,535 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_mni_mask" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/anat_derivatives_wf/ds_mni_mask". 210416-10:21:41,558 nipype.workflow INFO: [Node] Running "ds_mni_mask" ("qsiprep.workflows.anatomical.DerivativesDataSink") 210416-10:21:41,576 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_mni_mask". 210416-10:21:41,577 nipype.workflow INFO: [Job 58] Completed (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_mni_mask). 210416-10:21:43,402 nipype.workflow INFO: [MultiProc] Running 1 tasks, and 0 jobs ready. Free memory (GB): 56.33/56.53, Free processors: 31/32. Currently running: * qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_seg 210416-10:21:45,628 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_seg". 210416-10:21:47,405 nipype.workflow INFO: [Job 121] Completed (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.mni_seg). 210416-10:21:47,409 nipype.workflow INFO: [MultiProc] Running 0 tasks, and 1 jobs ready. Free memory (GB): 56.53/56.53, Free processors: 32/32. 210416-10:21:47,506 nipype.workflow INFO: [Node] Setting-up "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_mni_seg" in "/sngl/scratch/qsiprep_wf/single_subject_control01_wf/anat_preproc_wf/anat_derivatives_wf/ds_mni_seg". 210416-10:21:47,530 nipype.workflow INFO: [Node] Running "ds_mni_seg" ("qsiprep.workflows.anatomical.DerivativesDataSink") 210416-10:21:47,572 nipype.workflow INFO: [Node] Finished "qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_mni_seg". 210416-10:21:47,573 nipype.workflow INFO: [Job 122] Completed (qsiprep_wf.single_subject_control01_wf.anat_preproc_wf.anat_derivatives_wf.ds_mni_seg). 210416-10:21:49,405 nipype.workflow INFO: *********************************** 210416-10:21:49,406 nipype.workflow ERROR: could not run node: qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.dwi_qc_wf.raw_src_qc 210416-10:21:49,414 nipype.workflow INFO: crashfile: /sngl/qsiprep-output/qsiprep/sub-control01/log/20210416-094111_6865a7b6-176e-4c40-807f-674909d16ce1/crash-20210416-094222-fatx405-raw_src_qc-8f455aeb-590c-4cc6-b3ab-e71cfb9ca67a.txt 210416-10:21:49,414 nipype.workflow ERROR: could not run node: qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.raw_src_qc 210416-10:21:49,422 nipype.workflow INFO: crashfile: /sngl/qsiprep-output/qsiprep/sub-control01/log/20210416-094111_6865a7b6-176e-4c40-807f-674909d16ce1/crash-20210416-094222-fatx405-raw_src_qc-979b9de1-8ed0-4a3b-94fa-63f0b1ed02e0.txt 210416-10:21:49,423 nipype.workflow ERROR: could not run node: qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.dwi_qc_wf.raw_fib_qc 210416-10:21:49,430 nipype.workflow INFO: crashfile: /sngl/qsiprep-output/qsiprep/sub-control01/log/20210416-094111_6865a7b6-176e-4c40-807f-674909d16ce1/crash-20210416-094224-fatx405-raw_fib_qc-4ab27afb-a573-47b0-a2c3-6cf905b4906a.txt 210416-10:21:49,431 nipype.workflow ERROR: could not run node: qsiprep_wf.single_subject_control01_wf.dwi_preproc_wf.pre_hmc_wf.merge_and_denoise_wf.dwi_qc_wf.raw_fib_qc 210416-10:21:49,438 nipype.workflow INFO: crashfile: /sngl/qsiprep-output/qsiprep/sub-control01/log/20210416-094111_6865a7b6-176e-4c40-807f-674909d16ce1/crash-20210416-094224-fatx405-raw_fib_qc-9657f9f5-d924-473d-b06a-4fd04adc41e6.txt 210416-10:21:49,439 nipype.workflow ERROR: could not run node: qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_src_qc 210416-10:21:49,446 nipype.workflow INFO: crashfile: /sngl/qsiprep-output/qsiprep/sub-control01/log/20210416-094111_6865a7b6-176e-4c40-807f-674909d16ce1/crash-20210416-101825-fatx405-raw_src_qc-cf23a38f-0d31-4f60-b10e-f1f2b039a4aa.txt 210416-10:21:49,447 nipype.workflow ERROR: could not run node: qsiprep_wf.single_subject_control01_wf.dwi_finalize_wf.transform_dwis_t1.calculate_qc.raw_fib_qc 210416-10:21:49,453 nipype.workflow INFO: crashfile: /sngl/qsiprep-output/qsiprep/sub-control01/log/20210416-094111_6865a7b6-176e-4c40-807f-674909d16ce1/crash-20210416-102013-fatx405-raw_fib_qc-47ec961b-0f05-4ff8-a13c-279680d508d3.txt 210416-10:21:49,454 nipype.workflow INFO: ***********************************