Node: fmriprep_wf.single_subject_02_wf.func_preproc_task_rest_wf.sdc_wf.syn_sdc_wf.atlas_2_ref Working directory: /tmp/work/fmriprep_wf/single_subject_02_wf/func_preproc_task_rest_wf/sdc_wf/syn_sdc_wf/atlas_2_ref Node inputs: args = default_value = 0.0 dimension = environ = {'NSLOTS': '8'} float = False input_image = /usr/local/miniconda/lib/python3.7/site-packages/fmriprep/data/fmap_atlas.nii.gz input_image_type = interpolation = Linear interpolation_parameters = invert_transform_flags = [True, False, False] num_threads = 8 out_postfix = _trans output_image = print_out_composite_warp_file = reference_image = transforms = Traceback (most recent call last): File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/plugins/multiproc.py", line 69, in run_node result['result'] = node.run(updatehash=updatehash) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 410, in run cached, updated = self.is_cached() File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 296, in is_cached hashed_inputs, hashvalue = self._get_hashval() File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 493, in _get_hashval self._get_inputs() File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 540, in _get_inputs self.set_input(key, deepcopy(output_value)) File "/usr/local/miniconda/lib/python3.7/site-packages/nipype/pipeline/engine/nodes.py", line 278, in set_input setattr(self.inputs, parameter, deepcopy(val)) File "/usr/local/miniconda/lib/python3.7/site-packages/traits/trait_handlers.py", line 172, in error value ) traits.trait_errors.TraitError: The 'transforms' trait of an ApplyTransformsInputSpec instance must be a list of items which are an existing file name or 'identity', but a value of ['/tmp/work/fmriprep_wf/single_subject_02_wf/func_preproc_task_rest_wf/sdc_wf/syn_sdc_wf/ref_2_t1/transform0GenericAffine.mat', '/tmp/work/fmriprep_wf/single_subject_02_wf/anat_preproc_wf/anat_norm_wf/_template_MNI152NLin6Asym/registration/ants_t1_to_mniInverseComposite.h5', '/usr/local/miniconda/lib/python3.7/site-packages/fmriprep/data/fmap_atlas_2_MNI152NLin6Asym_affine.mat'] was specified. Error setting node input: Node: atlas_2_ref input: transforms results_file: /tmp/work/fmriprep_wf/single_subject_02_wf/func_preproc_task_rest_wf/sdc_wf/syn_sdc_wf/transform_list/result_transform_list.pklz value: ['/tmp/work/fmriprep_wf/single_subject_02_wf/func_preproc_task_rest_wf/sdc_wf/syn_sdc_wf/ref_2_t1/transform0GenericAffine.mat', '/tmp/work/fmriprep_wf/single_subject_02_wf/anat_preproc_wf/anat_norm_wf/_template_MNI152NLin6Asym/registration/ants_t1_to_mniInverseComposite.h5', '/usr/local/miniconda/lib/python3.7/site-packages/fmriprep/data/fmap_atlas_2_MNI152NLin6Asym_affine.mat']