working directory is /project/ctb-villens/dataset/PreventAD_2019-2020/mri/bids/ Running task 1 Commandline: singularity run --cleanenv -B /project/ctb-villens/javan/templateflow:/project/ctb-villens/javan/templateflow -B /project/ctb-villens/quarantine/Core/freesurfer/6.0.0/license.txt:/project/ctb-ville>/usr/local/miniconda/lib/python3.7/site-packages/bids/layout/validation.py:46: UserWarning: The ability to pass arguments to BIDSLayout that control indexing is likely to be removed in future; possibly as early> warnings.warn("The ability to pass arguments to BIDSLayout that control " 230116-16:12:24,252 nipype.workflow IMPORTANT: Running fMRIPREP version 20.2.0: * BIDS dataset path: /source_bids. * Participant list: ['MTL0002']. * Run identifier: 20230116-161207_0ec50095-8254-4850-b211-d6fcd45b1b76. * Output spaces: MNI152NLin2009cAsym:res-2 MNI152NLin2009cAsym:res-native anat. * Pre-run FreeSurfer's SUBJECTS_DIR: /out/freesurfer. 230116-16:12:26,167 nipype.workflow INFO: No single-band-reference found for sub-MTL0002_ses-FU84_task-rest_run-01_echo-01_bold.nii.gz. 230116-16:12:28,522 nipype.workflow IMPORTANT: Slice-timing correction will be included. 230116-16:12:28,530 nipype.workflow IMPORTANT: Generating T2* map and optimally combined ME-EPI time series. 230116-16:12:31,779 nipype.workflow INFO: fMRIPrep workflow graph with 337 nodes built successfully. 230116-16:12:50,250 nipype.workflow VERBOSE: fMRIPrep config: [environment] cpu_count = 40 exec_env = "singularity" free_mem = 22.3 overcommit_policy = "heuristic" overcommit_limit = "50%" nipype_version = "1.5.1" templateflow_version = "0.6.3" version = "20.2.0" 230116-16:12:55,762 nipype.workflow INFO: [Node] Finished "fmriprep_wf.single_subject_MTL0002_wf.func_preproc_ses_FU84_task_rest_run_01_echo_01_wf.bold_std_trans_wf.split_target". 230116-16:12:55,762 nipype.workflow INFO: [Job 2] Completed (fmriprep_wf.single_subject_MTL0002_wf.func_preproc_ses_FU84_task_rest_run_01_echo_01_wf.bold_std_trans_wf.split_target). 230116-16:12:55,910 nipype.workflow INFO: [Node] Setting-up "fmriprep_wf.single_subject_MTL0002_wf.func_preproc_ses_FU84_task_rest_run_01_echo_01_wf.bold_std_trans_wf.select_tpl" in "/work/fmriprep_wf/single_subject_MTL0002_wf/func_preproc_ses>230116-16:12:55,913 nipype.workflow INFO: [Node] Running "select_tpl" ("nipype.interfaces.utility.wrappers.Function")