About passing option to BASIL

Software Support
1

Summary of what happened:

Hello, I was wondering if it is possible to pass on the option --inferart to BASIL to include an arterial compartment in the model (when multi-PLD data is available), and if it outputs voxel-wise Arterial Blood Volume.

Command used (and if a helper script was used, a link to the helper script or the command generated):

PASTE CODE HERE

Version:

Environment (Docker, Singularity / Apptainer, custom installation):

Data formatted according to a validatable standard? Please provide the output of the validator:

PASTE VALIDATOR OUTPUT HERE

Relevant log outputs (up to 20 lines):

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Screenshots / relevant information:

2

It’s not currently possible because ASLPrep hardcodes its BASIL parameters, but it’s an option I can add.

3

That would be great. Should I open a request via GitHub?

4

Yes please. And feel free to include any other BASIL parameters (and when they should be allowed) you feel would be useful.

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