I have a 3D binary mask volume with dimension (512, 512, 105) and a deformation field with dimension (512, 512, 105, 1, 3) in nifti format. I want to apply the deformation field to the 3D binary mask volume. How can I achive that using nibabel ? If possible can someone please elaborate this with an example code.
# read 3D binary mask image volume binary_image_volume_path = "./Segmentation.nii.gz" binary_img = nib.load(binary_image_volume_path) binary_img_data = binary_img.get_data() # read dvf volume dvf_volume_path = "./Segmentation_DVF0000.nii.gz" dvf_volume = nib.load(dvf_volume_path) dvf_volume_data = dvf_volume.get_data() # code for apply this dvf to the binary mask image