Bash not giving an output

Software Support
81

Didn’t we already establish that your fmriprep_singleSubj.sh is the wrong script? Just use the fmriprep-docker command we described earlier.

fmriprep-docker /mnt/c/Users/clara/Desktop/Flanker \
    /mnt/c/Users/clara/Desktop/Flanker/derivatives/fmriprep participant \
    -w /mnt/c/Users/clara/Desktop/fmriprep_work \
    --participant-label 08 \
    --output-spaces MNI152NLin2009cAsym:res-2 \
    --nthreads=4 --mem-mb 20000
83

Good evening!

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When I ran the command the first time it said I might not have the correct permissions. I then pivoted to sudo but then it couldn’t find fmriprep-docker. Then I typed the “find” command and saw that fmriprep-docker was in fact on the computer.
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This also proves fmriprep-docker is on the computer/installed.