I have a few subjects that had poor T1W or no T1W done. Can i run fMRIPrep without a T1W? If so, how?
Not at present. fMRIPrep uses anatomical data as a common space to register all BOLD series to. There are other strategies that could be implemented.
- https://github.com/poldracklab/fmriprep/issues/755
- https://github.com/poldracklab/fmriprep/issues/620
If you’re interested in taking these on, we’d be glad to provide assistance.
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