I want to decode IC maps with neurosynth and get relevant keywords for each map. However, I cannot initialize neurosynth dataset. I am following the code here (which is the same in many other tutorials): https://github.com/neurosynth/neurosynth/blob/master/examples/create_a_new_dataset_and_load_features.py
I downloaded the “database.txt” and “features.txt” files from neurosynth’s repository.
However, when I run
dataset = Dataset('database.txt') command, I receive the following error:
ExpiredDeprecationError: get_header method is deprecated. Please use the ``img.header`` property instead. * deprecated from version: 2.1 * Raises <class 'nibabel.deprecator.ExpiredDeprecationError'> as of version: 4.0
I tried to find a workaround but I cannot load the dataset in another way. I tried changing the deprecated command in the script with the suggested one, but it did not work.
Is there any other updated way to initialize the database that I am not aware of? I would also appreciate it if you could help me with the decoding method too.