I am trying to run nipype on a HTCondor cluster, the program runs, but only 1 job is running while the remaining is idle. The htcondor cluster have 64 slots. I have set up a freesurfer pipeline
So my question is how do i get nipye to distribute the jobs. I thought I had to edit the plugin itself, but setting the enviroment from vanilla to parallel just gave errors.
also tried to give arguments to dagman, but that didn’t pan out as s solution either.
wf.run(plugin=‘CondorDAGMan’, plugin_args=dict(dagman_args=’-maxjobs= 25’))
I appreciate any help. .