Denoising in native surface space with XCP-D

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Hi NeuroStars,

I’m working on an analysis of functional anatomy and would like to work with each individual’s anatomy to avoid misalignment etc. I preprocessed the data with fmriprep with fsnative as the output space. Next, I would like to use XCP-D to remove confounds. However, I could not find an option to complete the processing in the native space. Is there a plan to integrate this option in XCP-D in the future or should I do this with connectome workbench functions?

Thank you for your help!

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I also have this question - we would like to do post-fMRIprep preprocessing with XCP-D, but are planning to do some brainstem analyses that should be in native space for first-level analyses. The data is preprocessed through fMRIprep with both MNI and subject-specific T1 native spaces. Do you know if it is possible to continue working with both spaces with XCP-D? Thank you!

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Hi @Vanessa_Brown and welcome to neurostars!

XCP-D does not support native space at this time.

Best,
Steven

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