Can anyone comment on the differences between these two projects? We’re wondering which we should use for analyzing DTI data. From the descriptions, they seem to do the same things, but I wouldn’t know. All I can tell is that dMRIprep seems to have come after qsiprep as they mention porting from qsiprep for their head motion correction.
From the preprint version of the paper of QSIPrep, Both dMRIPrep and QSIPrep use TOPUP and eddy for distortion, eddy current, and motion correction, but dMRIPrep did not include Gibbs unringing or MP-PCA.
On QSIPrep’s website they list the differences in good detail too: Comparisons to other pipelines — qsiprep version documentation