Hi @pbellec - sorry for the slow reply, I set aside this project for a bit. Could you clue me in on the latest updates? Thank you for the invitation! (I checked out the channel, but it is hard to succinctly piece together where things are)
Also I commented again here that I tried fmriprep with what have been mentioned as the flags necessary to make fmriprep deterministic, and yet I still see some (minor) variability in raw timecourses and anatomical reconstruction, if I start from scratch using the same dicoms and a random seed read from a file. Do you have any insight as to why this is not actually deterministic still? Thanks!!