I’ve setup a Conda environment, run the conda-forge commands to install nipype and fslpy (as well as a windows subsystem linux and normal FSL) and I can’t understand why nipype can’t locate the functions. I’ve opened the folder where the environment is in, and i see fsl scripts, so I’m not sure what to do next. Despite the pretty coherent tutorial, there is no mention I can find about troubleshooting the initial setup.
raise IOError( OSError: No command "fslreorient2std" found on host PC304462. Please check that the corresponding package is installed.
Any tips would be great. Thanks a lot.