I am trying to used mindboggle for the first time. I followed the instructions to install the docker container on a Linux machine.
I set the environment variables as this:
HOST=/home/neuroimaging/Documents/ (path where I have the folder example_mri_data)
And ran the command:
sudo docker run --rm -ti -v $HOST:$DOCK nipy/mindboggle $IMAGE --id $ID
However I got this message:
/neurodocker/startup.sh: line 5: /home/jovyan/work/example_mri_data/T1.nii.gz: Permission denied
Why is this happening? Can anyone help me with this?
Thanks in advance!