Does FSL BIDS App exist?

Software Support
1

Hi, I was wondering if a BIDS App already exists that runs FSL?

2

Hi @j.oweda and welcome to neurostars?

FSL does a lot of things, can you be more specific about what you are looking for? But no BIDS-app exists that will explicitly run a heads-to-tail FSL workflow for any modality, as far as I am aware at the moment. However, several BIDS-apps use FSL tools for parts of their workflows.

Best,
Steven

3

Hi @Steven thanks for the quick reply!

I want to use FSL_ANAT, FSL_VBM & FIRST

Best Regards

4

Hi @j.oweda,

No BIDS apps for those pipelines exist, sorry.

Best,
Steven

5

@Steven okay, thanks a lot for your help!