When running qsiprep using docker with the following command:
sudo docker run -ti --rm -v /home/quintin_frerichs/data/ds001590-download:/data:ro -v /home/quintin_frerichs/data/qsiprep-output:/out -v /home/quintin_frerichs/license.txt:/opt/freesurfer/license.txt pennbbl/qsiprep:latest /data /out participant --participant_label sub-01 --ignore fieldmaps --output-resolution 1.3
I’m getting this error:
Traceback (most recent call last):
File “/usr/local/miniconda/lib/python3.7/multiprocessing/process.py”, line 297, in _bootstrap
self.run()
File “/usr/local/miniconda/lib/python3.7/multiprocessing/process.py”, line 99, in run
self._target(*self._args, **self._kwargs)
File “/usr/local/miniconda/lib/python3.7/site-packages/qsiprep/cli/run.py”, line 722, in build_qsiprep_workflow
work_dir = opts.work_dir.resolve()
AttributeError: ‘NoneType’ object has no attribute ‘resolve’
Can’t find any solutions to this online.