Fmaps Inclusion in the Config File Prevents fMRIPrep to Create the func folder

Software Support
,
5

Hi @Steven,

I have BIDS validated the dataset (the fmaps were not fully BIDS compatibale, the session were missing in the intendedfor section of the json files in the fmap folder of the dataset, recognized it from this question on neurostars). I added sessions to the json files, the data was BIDS validated further, I inserted suffixes fpr the config file and upgraded the fmriprep singularity image to the vesrion 23.0.1. At this stage, the SDC was successfully applied on the data afeter running fMRIPrep.
Therefore, modifications I did:

  1. Adding session to the intendedfor section of the json files in the fmap folder of the sourcedata and make it BIDS validated.
  2. Added fmap compatibale suffixes to the config file as mentioned in the previous section.
  3. Upgraded the fMRIPrep to vesrion 23.0.1

Many thanks for the tips,
Ali