fMRIPrep --use-syn-sdc does not proceed with SyN SDC, even in the absence of fmap directory
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7
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74
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November 20, 2024
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Some question about second-Level fMRI Analysis in Nilearn: Design Matrix, Contrasts, and Parameter Clarification
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5
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703
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November 18, 2024
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fMRI group analysis (2nd level) input using nilearn
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2
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82
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November 15, 2024
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BIDS Validator error: TR mismatch between NIFTI header and JSON file, and BIDS Validator is somehow finding TR=0. Best solution?
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23
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7276
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November 14, 2024
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PhaseEncodingDirection "i" and "j-" in .json file
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23
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2591
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November 8, 2024
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Adding physiological regressors to fmri confounds file
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0
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43
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November 5, 2024
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Effect of temporal filter order on degrees of freedom
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3
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98
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November 1, 2024
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Wrong registration between fMRI data and fieldmap
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1
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78
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October 31, 2024
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How to Roughly Align Anatomical Images Within a Subject Before Serial Longitudinal Registration
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0
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44
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October 28, 2024
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AFNI Analysis: Choosing stim_times_AM1 vs. stim_times_AM2 and Using dmUBLOCK() for Modeling Condition Differences with Duration and Preference Ratings
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2
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69
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October 27, 2024
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Multiple Anatomical/Field Map Types and fMRIPrep
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6
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156
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October 21, 2024
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WM/CSF Regressors Using Eroded Masks: Questions Regarding Minimum Usable Voxel Count
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0
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60
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October 20, 2024
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Different shape, affine between fmriprep processed BOLD image and icbm152 gm mask pulled from nilearn dataset
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3
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101
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October 19, 2024
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Multidimensional Scaling on Cross-Validated RSA Data
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0
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66
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October 18, 2024
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AFNI Bootcamp, Part 1: Oct 28-30, 2024 (Virtual)
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0
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108
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October 18, 2024
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How to do a comparison of three groups for dynamic functional connectivity GIFT
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0
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348
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June 7, 2023
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Motion regressors from SPM to GIFT
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0
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62
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October 10, 2024
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Help with Setting Threshold and Cluster Size in AFNI GUI After Running 3dTcorr1D
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1
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133
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October 9, 2024
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Patient trained ICA-Fix
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2
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140
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October 7, 2024
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Poor Fieldmap <-> Functional Registration in fMRIPrep (highly variable step)
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4
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301
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October 3, 2024
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A question about how to use permutation tests in searchlight regression analysi
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0
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75
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October 3, 2024
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SPM Failed Contrast Manager--Error in contrast specification
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0
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172
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October 1, 2024
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Open 3T low-TR fMRI data with phase reconstruction
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5
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151
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September 30, 2024
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Question About ROI Analysis and Mask Generation in AFNI
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1
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178
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September 27, 2024
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Slice time correction and onset time: need adjustment?
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3
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159
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September 18, 2024
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T1 registration to EPI
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2
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201
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September 19, 2024
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Skull Stripping Nilearn
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2
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171
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September 18, 2024
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GE fieldmap correction with real/imaginary files
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13
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617
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September 17, 2024
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AFNI First Level Analysis: Handling Motion Regressors Across Multiple Runs
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1
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150
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September 13, 2024
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Difference between Prantik Kundu's MEICA v2.5 and latest tedana
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2
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159
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September 13, 2024
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