Hi,
I am totally new to the nice looking tool “fmridenoise”.
Here is the result from my 1st try, on a BIDS dataset that went well through FMRIPREP v.1.5.0:
fmridenoise TP_MASCO/derivatives/fmriprep
191025-00:35:45,945 nipype.utils INFO:
Running nipype version 1.3.0-rc1 (latest: 1.2.3)
Traceback (most recent call last):
File “/home/jsein/anaconda3/lib/python3.7/runpy.py”, line 193, in _run_module_as_main
“main”, mod_spec)
File “/home/jsein/anaconda3/lib/python3.7/runpy.py”, line 85, in _run_code
exec(code, run_globals)
File “/home/jsein/anaconda3/lib/python3.7/site-packages/fmridenoise-0.1.5-py3.7.egg/fmridenoise/main.py”, line 176, in
main()
File “/home/jsein/anaconda3/lib/python3.7/site-packages/fmridenoise-0.1.5-py3.7.egg/fmridenoise/main.py”, line 156, in main
ica_aroma=args.use_aroma)
File “/home/jsein/anaconda3/lib/python3.7/site-packages/fmridenoise-0.1.5-py3.7.egg/fmridenoise/workflows/base.py”, line 93, in init_fmridenoise_wf
output_dir=temps.mkdtemp(‘denoise’)
File “/home/jsein/anaconda3/lib/python3.7/site-packages/nipype-1.3.0rc1-py3.7.egg/nipype/interfaces/base/core.py”, line 590, in init
from_file=from_file, resource_monitor=resource_monitor, **inputs)
File “/home/jsein/anaconda3/lib/python3.7/site-packages/nipype-1.3.0rc1-py3.7.egg/nipype/interfaces/base/core.py”, line 182, in init
self.inputs = self.input_spec(**inputs)
File “/home/jsein/anaconda3/lib/python3.7/site-packages/nipype-1.3.0rc1-py3.7.egg/nipype/interfaces/base/specs.py”, line 71, in init
super(BaseTraitedSpec, self).init(**kwargs)
traits.trait_errors.TraitError: Cannot set the undefined ‘ica_aroma’ attribute of a ‘DenoiseInputSpec’ object.
Would anyone have a suggestion on the origin of the problem?
Thank you in advance!