Fmriprep-docker memory problems

Hi all,

I am having problems running fmriprep pipeline.

I use the command line --> “docker run poldracklab/fmriprep” and ones it starts running I obtain the following error: “no space left on device”

How can I solve this problem?


Hi Antton,

not an expert of fmriprep, but the error seems to be quite clear.

Can you post your full command line? Did you set any output or working folder? How much space on the device is allocated to docker (you can adjust this from docker settings)? And how much space is left on the disk you are running fmriprep on?