Hello - we used fmriprep 20.1.1 with the
--output-spaces fsLR, among other spaces. We also used the
--cifti-output flag but that might not be necessary since (I think) fmriprep automatically adds this if you request fsLR space.
space-fsLR_den-91k outputs and I’m wondering why 91k? Isn’t it convention to have the XXk be the mesh resolution, similar to how TemplateFlow organizes the different resolutions. If that’s the case, shouldn’t the outputs be
den-32k? I used
wb_command to look at the file dimensions and the data are definitely on the 32k mesh.
I’m wondering if this is a bug or if this was intended? Yeah there are 91282 rows in the cifti but not all of them are on the mesh. If this is the intended behavior, then how would it change if I specified a
fsLR:den-32k output space? Shouldn’t the output file names be in the format that I request? It seems confusing to me to have a den-91k since there is no template with this density in TemplateFlow.