I have run fmriprep with the freesurfer option on. When I tried to visualize a label with
freeview -v derivatives/freesurfer/sub-01/mri/rawavg.mgz -l derivatives/freesurfer/sub-01/label/lh.cortex.label
the alignment looks very poor. Is there a need to transform freesurfer labels/volumes after fmriprep?