Hi NeroStars folks,
I was hoping the forum could provide some guidance on improving the output of FreeSurfer. Currently the workflow in my lab involves a lot of manual checking and rerunning/correction which takes a lot of time. Is this what everyone’s workflow currently involves?
I have data from a few scanners and there is a noticeable improvement on our current scanner, but we are still having to manually correct segmentation and rerunning reconall.
Thanks for any advice, apologies if I am using any terms incorrectly or explaining wrong!
Edit: One thing we could do would be to update from 5.x to 7.2, not sure if there are specific changes across versions that would help with this.