Gene expression decoding Neurovault

neurovault

#1

Hi everyone !

I am using the gene expression decoding provided by the Neurovault.

I have the problem to download the decoding results showed at the website (e.g. Symbol, name and t values.…)

I tried to use the pd.read_html function to load the data, but got an empty dataframe (with the col names, but not the data).

I was wondering if anyone have certain solution (prefer Python solution) to download the results ?

Best,
Wei


#2

All gene expression decoding results are accessible in a programmatic way in JSON format via the following URLs:

https://neurovault.org/images/39024/gene_expression/json?mask=full

Where 39024 it the id of the image you are trying to decode, and full is the masking strategy (could be also set to cortex of subcortex).