HCPPipelines BIDS app error

Hi all,

I’m trying to run the HCPPipelines BIDS app by @rhancockn on some of my data using a singularity image that I built from the docker container (version 4.1.3-1).

There is no problem when running it with the “legacy” option. However, when running it with the “hcp” option to include the T2 image, fieldmaps, etc., I immediately get the following error message:

Traceback (most recent call last):
File “/run.py”, line 326, in
TypeError: list indices must be integers or slices, not str

Has anyone encountered the same problem or knows how to solve it?

Any help is much appreciated!

Thank you,