Help with importing dPCA code into colab notebook

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1

Our group is interested in trying to apply dPCA to some of the Steinmetz dataset. However, we’re not sure how to install the dPCA package from the machens lab (https://github.com/machenslab/dPCA) for use in colab. Any advice/pointers/instructions would be very helpful! Thanks!

2

This seems to work:

!wget https://github.com/machenslab/dPCA/archive/master.tar.gz
!tar -xzf master.tar.gz
!pip install dPCA-master/python
import dPCA
2 Likes
3

Thank you! yes, that works!

4

May anyone show working code with dPCA? Github demo was applied to noise and i’m not quite sure my code work well

5

unfortunately we decided to continue with some other approaches and never had time to fully explore dPCA. hope you are able to figure it out!