I am fairly new to the BIDS conversion using the heudiconv and eventhough i have been able to implement it with my anatomical dataset, i am having trouble converting my fmri resting state dataset. As my raw file, i have series of multiecho dicom files with the following naming
and 3 different README.txt files
eventhough you expect that each one of these README files have different echo number, they only variable they differ is their Instance (formerly image )number which is 1, 41, and 81. I am not sure if this raw data dicom layout is what heudiconv is expecting? should i separate these files to have 3 different subfolder each having one echo version? should i manually change the echo number in the README files? as of right now when i run the code i only generate one sub-01_ses-002_task-rest_run-001_bold.nii and sub-01_ses-002_task-rest_run-001_bold.json. how can i modify my code to generates 3 nifti & json file for all my echoes? along with a task-rest_bold.json & task-rest_event.tsv file under nifiti directory?