I’m actually not sure this is at all related to this issue, since i haven’t been able to use a new singularity container with this fix (doesn’t look like any new ones have been released since end of 2020) to see if it addresses it.
However, I realized upon trying to BIDS-validate that I’m also having this issue, where heudiconv is adding an empty CogAtlasID field to all the top-level task-<taskname>_bold.json files, which then is an error in BIDS-validation when I don’t actually have a CogAtlasID associated with the task…seems like unintended behavior when I don’t have a CogAtlasID in any lower-level files…I don’t want to have to delete it from top-level files every time after I use heudiconv to convert a new scan, it’s very tedious…is this intended? Is this part of touching all the files that would be fixed by this fix?