Hi! i would like to use a dti atlas with a high number of parcellations. I usually use JHU 81 atlas but am looking for a more fine grained way to analyze my DTI data. Any recommendations?
Thanks
Hi! i would like to use a dti atlas with a high number of parcellations. I usually use JHU 81 atlas but am looking for a more fine grained way to analyze my DTI data. Any recommendations?
Thanks
Hi @ET_123456,
You can use QSIprep and its reconstruction workflows (e.g., the mrtrix3 tractography workflows) to create connectivity matrices for several atlases with fine-grained parcellation. These connections won’t be a particular bundle per se (e.g., the arcuate).
(You can also do this outside of qsiprep but there’s more work involved)
Best,
Steven
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