I am currently working on processing fMRI and sMRI of ADNI data set(Alzheimer’s disease open data source).
I’m struggling with organizing multiple sessions.
For example, I want to organize files like this.
subjectID
- ses 1
- anat
- func
- ses 2
- anat
- func
However, session number is different from person to person.
In addition, the original folder does not named as session number, rather imaging date.
So when I tested as it is written on the tutorial site, it is not organized into session number or imaging date, but run01 or run02 was attached in front of the nii.gz file.
Anyway, organizing session can be done on the terminal? Or should I edit configuration file?
Below is the configuration file.
{
“descriptions”: [
{
“dataType”: “anat”,
“modalityLabel”: “T1w”,
“criteria”: {
“SidecarFilename”: “MPRAGE_SENSE2”,
“SeriesDescription”: “MPRAGE_SENSE2”
}
},
{
"dataType": "func",
"modalityLabel": "bold",
"customLabels": "task-rest",
"criteria": {
"SidecarFilename": "*Resting_State_fMRI*",
"SeriesDescription": "Resting_State_fMRI"
}
}
]
}