Hi! I have preprocessed my fmri data using fmriprep as well as SPM12. I now want to compare the outputs of each data set from the two different softwares. I am going to run my first-level analysis for both using SPM12. How do i use my fmriprep data for SPM12 analysis?
When I load a batch into SPM12, I cannot select the fmriprep func data. Do I have to do something first to the fmriprep data to make it compatiable with SPM12? Will the outputs of each software be in different MNI space?
I used Docker for fmriprep and Matlab for SPM12