Initial run of tractoflow

1

Hi,
I am trying to run tractoflow pipeline for one subject (No BIDs format). I used this command:
nextflow run tractoflow -r 2.4.2 --input root -with-docker scilus/scilus:1.5.0

I was getting the following:
NOTE: Process `Bet_Prelim_DWI (S1)` terminated with an error exit status (1) -- Execution is retried (1)
So I stopped. How can I resolve this?

2

Hi @Akram,

You should have something like that printed:
[96/5895f0] process > Bet_Prelim_DWI

You’ll get the error by looking at this file work/96/5895f0*/.command.err

Best,
Arnaud

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