After running fmriprep on 10 subjects, 4 of the brain extractions failed and I am unsure of how to troubleshoot this issue (example included). Of note, our anatomical data are PURE corrected. Would that be redundant or cause an issue with the N4BiasField correction?
–ignore fieldmaps slicetiming
–bold2t1w-dof 6 --nthreads 8 --omp-nthreads 8
–write-graph --notrack -v
/data/nifti_test /data/derivatives/FMRI_Sentences participant"