Dear BCBToolkit Maintainers,
When running Tractotron using the JHU Atlas within the BCBToolkit v4.1.0 (OSX) directory for tracts, there is an error given in the output xls files under SAF_MFG_IFG_L:
Label does not exist, closest match is “SAF_SFG_IFG_L.nii.gz - Small associative fibres superior frontal - inferior frontal l gyri left”
→ although this NIFTI file for SAF_MFG_IFG_L does seem to exist in the directory.
Also, with closer inspection the following tracts are only available in the directory with 1 lateralization:
SAF_Fu_IOG_L.nii.gz
SAF_Fu_MOG_L.nii.gz
SAF_LFOG_MFOG_L.nii.gz
SAF_MFG_IFG_L.nii.gz
SAF_SFG_IFG_L.nii.gz
SAF_Cu_MOG_L.nii.gz
SAF_SFG_RG_R.nii.gz
SAF_SPG_MOG_L.nii.gz
SAF_SPG_SOG_L.nii.gz
As can be seen, most of the Right-sided tracts are missing, along with 1 Left-side tract for SAF_SFG_RG.
Could you please let me know if these files are available for download somewhere else? Or would you suggest that this atlas not used at all?
Thank you.
Best Regards,
Claudia