Hi everyone,
I am new to manual segmentation and I am trying to do it with 3d slicer.
Here are the steps I have done so far:
- register the T1 image to MNI space.
- skectch the lesion on the patient brain (on the registered T1).
- create a labelmap/3d model of the manually segmented brain
- ?
My question is how to use the label map or the 3d model to find out what ROI is the lesion in using a specific atlas?