Our participant IDs all start with a “s” (e.g., s001, s002, etc). However, MRIQC drops these when parsing the inputs, then complaints participant label 001, 002, etc doesn’t exist.
mriqc /data/[REDACTED]/BIDS ${TMPDIR}/s23279.out participant --participant_label s23279 -w ${TMPDIR}/s23279.wrk --n_procs 1 --no-sub
mriqc: error: One or more participant labels were not found in the BIDS directory: 23279.
Let me add that the last version that didn’t have this problem was 0.14.2. We can’t run any more recent version (containerized or not) without this problem.
Hi Anderson, we did figure out the issue, and it should be fixed in 0.16.1, which was released between my post and yours. Did you see that, or is there still an issue in that version?