Hi all,
I created a structural ROI for the vmPFC using fslregister > mri_vol2surf > mri_cor2label > mri_label2label to map onto individual participants… I am now trying to run mri_anatomical_stats on the label files for each participant that lives in their $SUBJECTS_DIR/sub-001/abel directories. I am able to run the script using a batch/job set up with a for loop iterating through each subject, I see the output generating in my terminal and when I specify -f FILENAME.txt, there is sometimes an output file but it only contains the last participant on the subject list.
Has anyone been able to run mris_anatomical_stats on multiple subjects successfully and if so, how? Thanks!