Hello everyone!
We have just released Nilearn 0.10.3!
Update from PyPi
pip install --upgrade nilearn
Experimental Surface API
We are further developing our surface API experimental module and we are interested in getting your feedback on this. We have an example showcasing what can be done here.
Please add comments in this issue: Feedback Request: Experimental Surface API in Nilearn 0.10.2 · Issue #4158 · nilearn/nilearn · GitHub
Changes
WARNING
Support for python 3.7 has been dropped. We recommend moving to python >= 3.11.
Note we have bumped the minimum supported versions of some of our dependencies:
- Numpy – v1.19.0
- SciPy – v1.8.0
- Scikit-learn – v1.0.0
- Nibabel – v4.0.0
- Pandas – v1.1.5
- Joblib – v1.0.0
This is a minor release with some exciting new features:
- Allow passing arguments to first_level_from_bids to build first level models that include specific set of confounds by relying on the strategies from load_confounds
- Support passing t and F contrasts to compute_contrast that have fewer columns than the number of estimated parameters. Remaining columns are padded with zero
- NiftiSpheresMasker now has generate_report method
- Update the CompCor strategy in load_confounds and load_confounds_strategy to support fmriprep 21.x series and above
- Combine GLM examples plot_fixed_effect and plot_fiac_analysis into a single example plot_two_runs_model
- Allow setting vmin in plot_glass_brain and plot_stat_map
- When plotting thresholded statistical maps with a colorbar, the threshold value(s) will now be displayed as tick labels on the colorbar
You can see the full changelog of this release here: What’s new - Nilearn
The full list of pull requests included in this version:
The full “diff” since last version:
New contributors
Thanks to our 7 new contributors !!!
- NIkhil Krish (@NIkhilgKrish) made their first contribution in #4042
- Mia Zawally (@MIZwally) made their first contribution in #4051
- Jordi Huguet (@jhuguetn) made their first contribution in #4028
- Tamer Gezici (@TamerGezici) made their first contribution in #4122
- Christina Roßmanith (@crossmanith) made their first contribution in #4136
- Suramya Pokharel (@SuramyaP) made their first contribution in #4159
- Paul Reiners (@paul-reiners) made their first contribution in #4208
Nilearn links
- Github: GitHub - nilearn/nilearn: Machine learning for NeuroImaging in Python
- Documentation: https://nilearn.github.io
- Pypi: nilearn · PyPI
- Twitter: https://twitter.com/nilearn
- Mastodon: Nilearn (@nilearn@fosstodon.org) - Fosstodon
- Discord: Nilearn
- Digital object identifier: nilearn
- Research resource identifier: RRID:SCR_001362