I am writing a custom command line interface to wrap a command line executable created by me. I integrated it as part of a simple workflow. After running it, I got this runtime error:
I then traced it back to the core.py file:
The cmd should exist. I am not sure why the runtime return code was incorrect and raised the exception. Does it have to do with the runtime dependencies?
Any ideas what raised the exception? I would greatly appreciate any suggestions.
I am using nipype 1.0.3 with Python 3.6.4.