Output.html includes multiple subjects

Software Support
1

Summary of what happened:

Hello,

I’ve finished running fMRIPrep and am about to begin going through the .html files to QA. Unfortunately, some of my .html files include images from multiple subjects. I think this is caused by my lack of leading zeros in the subject name, e.g., sub-1 instead of sub-001.

This means that my sub-1.html shows the spatial normalization gif for all subs matching “sub-*”, e.g., sub-10, sub-11, sub-100, etc. I only see all this other subject data for the spatial normalization step, but not for any other parts of preprocessing.

I can confirm that all of the figures are correctly organized per subject, as sub-XX/figures/[fig1.svg]. Only the sub-1 figures are in the sub-1/figures directory.

Is this due to how the .html files reads the images? Can this be altered in anyway? Or is the only alternative to re-name the subjects with leading zeros and rerun fMRIPrep?

Thanks,
Ryan

Command used (and if a helper script was used, a link to the helper script or the command generated):

singularity run -B $fmriprep_dir fmriprep_24.1.1.sif \
    --participant-label sub-1 \
    --fs-license-file $FS_LICENSE \
    --nthreads 8 \
    $fmriprep_dir/bids \
    $fmriprep_dir/output participant \
    -w $fmriprep_dir/output/work

Version:

24.1.1

Environment (Docker, Singularity / Apptainer, custom installation):

Singularity

Data formatted according to a validatable standard? Please provide the output of the validator:

bids-validator@1.14.10
        1: [WARN] The Authors field of dataset_description.json should contain an array of fields - with one author per field. This was triggered because there are no authors, which will make DOI registration fr>

Relevant log outputs (up to 20 lines):

n/a

Screenshots / relevant information:

No processing errors for any subject. 
Data were run in an HPC, then the relevant output was downloaded and viewed on my local Mac.